NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F102754

Metagenome / Metatranscriptome Family F102754

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F102754
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 40 residues
Representative Sequence ALVALTLVAAVWVALHAYEIIWWREARARTRALRLPASA
Number of Associated Samples 90
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 96.04 %
% of genes from short scaffolds (< 2000 bps) 93.07 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.079 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(18.812 % of family members)
Environment Ontology (ENVO) Unclassified
(27.723 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.525 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.25%    β-sheet: 0.00%    Coil/Unstructured: 50.75%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF06224HTH_42 4.95
PF00909Ammonium_transp 4.95
PF06348DUF1059 4.95
PF13462Thioredoxin_4 3.96
PF01243Putative_PNPOx 3.96
PF08241Methyltransf_11 2.97
PF01434Peptidase_M41 1.98
PF00903Glyoxalase 1.98
PF07992Pyr_redox_2 1.98
PF08327AHSA1 1.98
PF05988DUF899 1.98
PF06772LtrA 1.98
PF13847Methyltransf_31 0.99
PF03795YCII 0.99
PF03551PadR 0.99
PF08281Sigma70_r4_2 0.99
PF06480FtsH_ext 0.99
PF13472Lipase_GDSL_2 0.99
PF00118Cpn60_TCP1 0.99
PF01494FAD_binding_3 0.99
PF15780ASH 0.99
PF028262-Hacid_dh_C 0.99
PF09335SNARE_assoc 0.99
PF08308PEGA 0.99
PF03176MMPL 0.99
PF01565FAD_binding_4 0.99
PF09413DUF2007 0.99
PF00150Cellulase 0.99
PF13671AAA_33 0.99
PF00004AAA 0.99
PF14534DUF4440 0.99
PF14342DUF4396 0.99
PF07510DUF1524 0.99
PF00999Na_H_Exchanger 0.99
PF00462Glutaredoxin 0.99
PF01510Amidase_2 0.99
PF08240ADH_N 0.99
PF12697Abhydrolase_6 0.99
PF07690MFS_1 0.99
PF01266DAO 0.99
PF01370Epimerase 0.99
PF06803DUF1232 0.99
PF13365Trypsin_2 0.99
PF13419HAD_2 0.99
PF030614HBT 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0004Ammonia channel protein AmtBInorganic ion transport and metabolism [P] 4.95
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 4.95
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 2.97
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.98
COG4292Low temperature requirement protein LtrA (function unknown)Function unknown [S] 1.98
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 1.98
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.99
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 0.99
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.99
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.99
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.99
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 0.99
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.99
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.99
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 0.99
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 0.99
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.99
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.99
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.99
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.99
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 0.99
COG2730Aryl-phospho-beta-D-glucosidase BglC, GH1 familyCarbohydrate transport and metabolism [G] 0.99
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.99
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.99
COG3339Uncharacterized membrane protein YkvA, DUF1232 familyFunction unknown [S] 0.99
COG3934Endo-1,4-beta-mannosidaseCarbohydrate transport and metabolism [G] 0.99
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.99

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.07 %
UnclassifiedrootN/A6.93 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0266412All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300000550|F24TB_11264893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia520Open in IMG/M
3300000891|JGI10214J12806_12152706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales951Open in IMG/M
3300000955|JGI1027J12803_105156163All Organisms → cellular organisms → Bacteria → Terrabacteria group908Open in IMG/M
3300000956|JGI10216J12902_101643668All Organisms → cellular organisms → Bacteria → Terrabacteria group608Open in IMG/M
3300001538|A10PFW1_10030239All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300002568|C688J35102_120880165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1984Open in IMG/M
3300004480|Ga0062592_101258648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria695Open in IMG/M
3300004643|Ga0062591_100079975All Organisms → cellular organisms → Bacteria2023Open in IMG/M
3300005180|Ga0066685_10184189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1429Open in IMG/M
3300005294|Ga0065705_10782399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria617Open in IMG/M
3300005332|Ga0066388_100740396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1584Open in IMG/M
3300005535|Ga0070684_102023389All Organisms → cellular organisms → Bacteria → Terrabacteria group544Open in IMG/M
3300005538|Ga0070731_11110194All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300005557|Ga0066704_10409789Not Available899Open in IMG/M
3300005598|Ga0066706_11039587All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300006845|Ga0075421_102594311Not Available526Open in IMG/M
3300006854|Ga0075425_100575994All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1295Open in IMG/M
3300006914|Ga0075436_100071633All Organisms → cellular organisms → Bacteria2397Open in IMG/M
3300006969|Ga0075419_10698339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus719Open in IMG/M
3300007076|Ga0075435_101416218All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300009089|Ga0099828_11000487All Organisms → cellular organisms → Bacteria → Terrabacteria group745Open in IMG/M
3300009098|Ga0105245_10968474All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300009098|Ga0105245_11222453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium799Open in IMG/M
3300009100|Ga0075418_11119005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria853Open in IMG/M
3300009137|Ga0066709_101240813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1096Open in IMG/M
3300009137|Ga0066709_104443760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium512Open in IMG/M
3300009148|Ga0105243_11222979All Organisms → cellular organisms → Bacteria → Terrabacteria group765Open in IMG/M
3300009176|Ga0105242_11999263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria622Open in IMG/M
3300009553|Ga0105249_10703528All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria1071Open in IMG/M
3300010043|Ga0126380_10093832All Organisms → cellular organisms → Bacteria1780Open in IMG/M
3300010325|Ga0134064_10241837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria664Open in IMG/M
3300010358|Ga0126370_11914491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria577Open in IMG/M
3300010396|Ga0134126_12173463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia606Open in IMG/M
3300010398|Ga0126383_12345242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia619Open in IMG/M
3300010401|Ga0134121_10121148All Organisms → cellular organisms → Bacteria2209Open in IMG/M
3300012200|Ga0137382_10522672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria844Open in IMG/M
3300012204|Ga0137374_10347139All Organisms → cellular organisms → Bacteria1198Open in IMG/M
3300012205|Ga0137362_10952548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria732Open in IMG/M
3300012353|Ga0137367_10943266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria592Open in IMG/M
3300012362|Ga0137361_10013489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5954Open in IMG/M
3300012914|Ga0157297_10185131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium708Open in IMG/M
3300012960|Ga0164301_10122935Not Available1537Open in IMG/M
3300012961|Ga0164302_11703598Not Available528Open in IMG/M
3300013308|Ga0157375_13297587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria538Open in IMG/M
3300014157|Ga0134078_10267249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300014745|Ga0157377_11518017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium533Open in IMG/M
3300015371|Ga0132258_10694655All Organisms → cellular organisms → Bacteria2561Open in IMG/M
3300015371|Ga0132258_11974187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1468Open in IMG/M
3300015372|Ga0132256_102407161All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300015372|Ga0132256_103876778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales503Open in IMG/M
3300018027|Ga0184605_10156145All Organisms → cellular organisms → Bacteria1028Open in IMG/M
3300018027|Ga0184605_10521924Not Available515Open in IMG/M
3300018054|Ga0184621_10054335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1346Open in IMG/M
3300018054|Ga0184621_10352811Not Available517Open in IMG/M
3300018073|Ga0184624_10354828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria656Open in IMG/M
3300018433|Ga0066667_10253784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1335Open in IMG/M
3300018482|Ga0066669_10556895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1000Open in IMG/M
3300018482|Ga0066669_11511110All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia610Open in IMG/M
3300019269|Ga0184644_1090906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia630Open in IMG/M
3300019279|Ga0184642_1619096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300019767|Ga0190267_10553457All Organisms → cellular organisms → Bacteria → Terrabacteria group697Open in IMG/M
3300021344|Ga0193719_10282473All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia698Open in IMG/M
3300024288|Ga0179589_10579451All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300025910|Ga0207684_10295100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1398Open in IMG/M
3300025915|Ga0207693_10975804All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales648Open in IMG/M
3300025919|Ga0207657_10871831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium694Open in IMG/M
3300025928|Ga0207700_10370271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1251Open in IMG/M
3300025939|Ga0207665_10763179All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae763Open in IMG/M
3300025949|Ga0207667_11475226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia652Open in IMG/M
3300025981|Ga0207640_10465870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1045Open in IMG/M
3300025981|Ga0207640_10713430All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria861Open in IMG/M
3300026075|Ga0207708_11289409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia640Open in IMG/M
3300026089|Ga0207648_10952583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium803Open in IMG/M
3300026116|Ga0207674_12138577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia523Open in IMG/M
3300026121|Ga0207683_10567851All Organisms → cellular organisms → Bacteria → Terrabacteria group1049Open in IMG/M
3300026300|Ga0209027_1044604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1668Open in IMG/M
3300026540|Ga0209376_1386851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium523Open in IMG/M
3300027577|Ga0209874_1041696All Organisms → cellular organisms → Bacteria1220Open in IMG/M
3300027907|Ga0207428_11113164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria552Open in IMG/M
3300027908|Ga0209006_10672864All Organisms → cellular organisms → Bacteria849Open in IMG/M
3300027908|Ga0209006_11059622All Organisms → cellular organisms → Bacteria → Terrabacteria group642Open in IMG/M
3300028715|Ga0307313_10119172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum807Open in IMG/M
3300028716|Ga0307311_10081256All Organisms → cellular organisms → Bacteria → Terrabacteria group890Open in IMG/M
3300028717|Ga0307298_10157654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria661Open in IMG/M
3300028771|Ga0307320_10159947All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria873Open in IMG/M
3300028796|Ga0307287_10242020All Organisms → cellular organisms → Bacteria → Terrabacteria group683Open in IMG/M
3300028807|Ga0307305_10290781All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia744Open in IMG/M
3300028811|Ga0307292_10211047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium799Open in IMG/M
3300028824|Ga0307310_10568878All Organisms → cellular organisms → Bacteria → Terrabacteria group575Open in IMG/M
3300028875|Ga0307289_10092794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1229Open in IMG/M
3300028876|Ga0307286_10177227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Ag109_G2-15769Open in IMG/M
3300028878|Ga0307278_10029219All Organisms → cellular organisms → Bacteria2528Open in IMG/M
3300028878|Ga0307278_10105238All Organisms → cellular organisms → Bacteria1268Open in IMG/M
3300028878|Ga0307278_10231893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium821Open in IMG/M
3300028885|Ga0307304_10374578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium639Open in IMG/M
3300030336|Ga0247826_10839467All Organisms → cellular organisms → Bacteria → Terrabacteria group722Open in IMG/M
3300031820|Ga0307473_10790298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria676Open in IMG/M
3300032782|Ga0335082_10698382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium876Open in IMG/M
3300033550|Ga0247829_11807794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium503Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.95%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.98%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.98%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.99%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.99%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.99%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.99%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027577Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_026641223300000033SoilVALALLTAVWVALHAYELIWWREARAETRAMRLTASAS*
F24TB_1126489313300000550SoilLVPAALAVQAIVALGLVTAVWVVLHAYELIWWRAARAELRAQREPASAS*
JGI10214J12806_1215270633300000891SoilGLTLVTMVWLGLHAYEIIWWREARAEARALRAPAA*
JGI1027J12803_10515616323300000955SoilLALALITVVWLALHAYELIWWREARAETRALPRPT*
JGI10216J12902_10164366813300000956SoilLVAAVWVALHTYEIVWWREARAQTRALRASAPAS*
A10PFW1_1003023923300001538PermafrostVVVPALVALALVAVVWLTLHAYELISWSEARGTARNRA
C688J35102_12088016533300002568SoilALSLLAAVWVALHAYELIWWRAARTETRTQREMASVSSP*
Ga0062592_10125864823300004480SoilVVVPALVALALVAGVWVTLHAYELIWWREARAEARLQRSPV*
Ga0062591_10007997553300004643SoilVPALVALTLVTIVWLGLHAYEIIWWREARAQTRALRAPAA*
Ga0066685_1018418913300005180SoilVPALVALTLVTIVWVGLHAYEVIWWREARAQTRALRVPAS*
Ga0065705_1078239913300005294Switchgrass RhizosphereALVVPALVALALVAAVWVALHAYEIIWWREDRARIRAQRVPVSAP*
Ga0066388_10074039613300005332Tropical Forest SoilSIPAIVALALVTGVWVVLHAYELIWWRAQRAEIRAERVPASVS*
Ga0070684_10202338923300005535Corn RhizosphereVPALIALTLVTIVWLGLHAYEIIWWREARAEARALRAPAA
Ga0070731_1111019413300005538Surface SoilVVPALAALALVAGVVVALHAYELIWWREARAEAHAQRYPVQT*
Ga0066704_1040978913300005557SoilALFPAARAVSALIALTLIAAVWIALHAYEIIGWREARAEARALR*
Ga0066706_1103958723300005598SoilVAVPALLALALVAAVWVALHAYEIIWWREARARTRALRLPASAS*
Ga0075421_10259431113300006845Populus RhizosphereALVVPALVALTLLAVVWVVFHAYELIWWREERAQVRALRVPG*
Ga0075425_10057599413300006854Populus RhizosphereLLAAVWIALHAYELIWWRAARTEIRTQREMASVSSP*
Ga0075436_10007163353300006914Populus RhizosphereLAVPALVTVVLVAAVWVSLHAYELIWWREARAERRAMQAQAS*
Ga0075419_1069833923300006969Populus RhizosphereLTLVTGVWLALHAYELIWWREARAEARASRSPAPASP*
Ga0075435_10141621813300007076Populus RhizosphereLAALGLVAAVWVALHAYEIIWFREARAQTRALRQPASP*
Ga0099828_1100048713300009089Vadose Zone SoilLVALTLVAAVWVALHAYEIIWWREARARTRALRLPASAS*
Ga0105245_1096847433300009098Miscanthus RhizosphereVVPALAALALVAAVWVCLHAYELIWWREARAETRLQRLPASS*
Ga0105245_1122245333300009098Miscanthus RhizosphereLTLVTIVWLGLHAYEIIWWREARAQTRALRAPAA*
Ga0075418_1111900533300009100Populus RhizosphereAIGALAALTAVWVALHAYELIWWREARAEVREQRVPASAS*
Ga0066709_10124081323300009137Grasslands SoilALALVAAVWIALHAYEIIWWREARERTRALRSPASAS*
Ga0066709_10444376013300009137Grasslands SoilTLVTAVWVAFHAYEIIWWREARARTRAQRLPASAS*
Ga0105243_1122297923300009148Miscanthus RhizosphereALVAAVWVALHAYEIIWWREARAETRALRAPVSAS*
Ga0105242_1199926313300009176Miscanthus RhizosphereIALVVPALISLALVTAVWVALHTYEIIWWREARAQTRALRQPTP*
Ga0105249_1070352823300009553Switchgrass RhizosphereALTLVATVWVALHAYELIWWREARAETRALRLPA*
Ga0126380_1009383233300010043Tropical Forest SoilAMTVPAIAALAALAGVWITLHAYELIWWRAERAEVREQRLPASASWR*
Ga0134064_1024183733300010325Grasslands SoilWALVTLALVAGVWVALHAYELIWWRAERTELRAQRA*
Ga0126370_1191449113300010358Tropical Forest SoilAALAALTGVWIALHAYELIWWRAERAEVREQRLPASASWR*
Ga0126381_10431897423300010376Tropical Forest SoilVPALAALALVAGVWVALHVYELVWWRDERAEARAQQYLSA*
Ga0134126_1217346313300010396Terrestrial SoilALVTAVWVALHAYELIWWRAARAELRAQREPASAS*
Ga0126383_1234524213300010398Tropical Forest SoilIVALALVATAWIGLHGYELIWWRAARAEARALRPSV*
Ga0134121_1012114813300010401Terrestrial SoilLVAAVWVALHAYEIIWWREARAETRALRAPVSAS*
Ga0137382_1052267213300012200Vadose Zone SoilPAIVALALVTTVWVALHAYELIWWRAARAEVRAQRVSASAS*
Ga0137374_1034713913300012204Vadose Zone SoilALVALSLVAAVWIALHAYEIIWWREARARTRALRVPASVSETGGHA*
Ga0137362_1095254813300012205Vadose Zone SoilLVVPALVALALVAAVWVALHAYEIIWWREARARTRALRAPASAS*
Ga0137367_1094326633300012353Vadose Zone SoilALVALTLVAAIWVALHAYELIWWREARADARAQRA*
Ga0137361_1001348983300012362Vadose Zone SoilVPALAALALVTAVWVALHAYEIIWWREARARTRAQRLASAS*
Ga0157297_1018513113300012914SoilALVALTLVAAVWVALHAYEIIWWREARARTRALRLPASA*
Ga0164301_1012293523300012960SoilALALVALVWVALHASEIISWREARAQTRAMRAPASAS*
Ga0164302_1170359813300012961SoilAFIAAVWVALHTYEIIWWREARAEARGLRVPASTA*
Ga0157375_1329758713300013308Miscanthus RhizosphereAPAIAALAALTAVWVALHAYELIWWREARAEVREQRVPASAS*
Ga0134078_1026724913300014157Grasslands SoilLVTAVWIALHAYELIWWRAARADVRAQRVSASAS*
Ga0157377_1151801713300014745Miscanthus RhizosphereALIALTLVTIVWLGLHAYEIIWWREARAEARALRAPAA*
Ga0132258_1069465513300015371Arabidopsis RhizosphereALVAGVWVGLHAYELIWWREARAEARMHRSPSPS*
Ga0132258_1197418723300015371Arabidopsis RhizosphereALVALTLVAAVWVGLHAYEIVWWREARAEARALRLPA*
Ga0132256_10240716123300015372Arabidopsis RhizosphereALVVPAFVALTLVAIAWVGLHAYELIWWRDARTQTRALRV*
Ga0132256_10387677813300015372Arabidopsis RhizosphereTAVPALAALAIVAAVWIALHAYELIWWREARAQTRALRMPA*
Ga0184605_1015614533300018027Groundwater SedimentLIAVVWVALHAYEFVWWREARAETRALRLPPSASEQA
Ga0184605_1052192413300018027Groundwater SedimentLTLVAAVWVAFHAYEFIWWREARARTRALRLPASAS
Ga0184621_1005433523300018054Groundwater SedimentALALVAAVWVALHAYEIIWWREARAETRALRAPLSAS
Ga0184621_1035281123300018054Groundwater SedimentAVPALVALALTAAVWIALHAYEIIWWREARAQTRALRVPASAS
Ga0184624_1035482823300018073Groundwater SedimentALVVPALVALALVASVWVVLHAYELIWWREARAQTRAGRAPAPAS
Ga0066667_1025378413300018433Grasslands SoilVALALVAAVWVALHAYEIIWWREARAQARALRAPVSAS
Ga0066669_1055689513300018482Grasslands SoilPAIAALSFLAAVWVVLHAYELIWWRGARTETRAQREMASVSSP
Ga0066669_1151111023300018482Grasslands SoilVAVVGPALIALALVATVWVALHSYEIIWWREARAQTRALRVTAAS
Ga0184644_109090613300019269Groundwater SedimentVAMSVPALVALALVAAVWVALHAYEIIWWREARAETRALRAPLSAS
Ga0184642_161909613300019279Groundwater SedimentLVVPALVALTLMAAVWVSLHAYEIIWWREARARTRALRLPASVS
Ga0190267_1055345723300019767SoilVAVPALAALALATLVWVLLHAYEFVWWREARAATRALRLTANS
Ga0193719_1028247313300021344SoilALALVTAVWVVLHAYELIWWRAARAELRAERAPASAS
Ga0179589_1057945123300024288Vadose Zone SoilPALAALALVAAVWVALHVYEIVWWRDARAQTRALRAPASAS
Ga0207684_1029510023300025910Corn, Switchgrass And Miscanthus RhizosphereALVALALVAAVSVALHAYEIIWWREARARTRALRLPASASEPGSHV
Ga0207693_1097580413300025915Corn, Switchgrass And Miscanthus RhizosphereLIPVATSVPALVALALVAAIWVALHAYEIIWWREARAETRA
Ga0207657_1087183133300025919Corn RhizosphereVVPALVALTLVTIVWLGLHAYEIIWWREARAQTRALRAPAA
Ga0207700_1037027113300025928Corn, Switchgrass And Miscanthus RhizosphereIVALALVTAVWVALHAYELIWWRAARAELRAQREPASAS
Ga0207665_1076317913300025939Corn, Switchgrass And Miscanthus RhizosphereVVVPALVALALLAAVWVALHAYEIIWWREARARTRAMRAPVSAS
Ga0207667_1147522613300025949Corn RhizosphereLAVQAIVALALVTAVWVALHAYELIWWRAARAELRAQREPASAS
Ga0207640_1046587013300025981Corn RhizosphereAALALVAAVWVGLHAYELIWWREERAQVRALRVPG
Ga0207640_1071343013300025981Corn RhizosphereLAALTAVWVALHAYELIWWREARAEVREQRVPASAS
Ga0207708_1128940913300026075Corn, Switchgrass And Miscanthus RhizospherePVALAVPALGALALITAVWVAFHAYEIIWWREARAEARALRD
Ga0207648_1095258333300026089Miscanthus RhizospherePAIAALAALAAVWVALHAYELIWWREARAEVREQRVPASAS
Ga0207674_1213857723300026116Corn RhizosphereMRCLLALALVAAVWVALHAYEIIWWREARAETRALRAPASAS
Ga0207683_1056785113300026121Miscanthus RhizosphereTVAALAALALVAAVWIALHAYEIIWWREARAAARALRATT
Ga0209027_104460423300026300Grasslands SoilVTLTVPAIAALSLLAAVWVALHAYELIWWRAARTETRTQREMASVSSP
Ga0209376_138685123300026540SoilPALGALGALAVVWIALHAYELIWWREVRAQTRAQRMPASAS
Ga0209874_104169623300027577Groundwater SandALVALTLVAIVWVGLHAYEIIWWREARAQTRALRVPASSPE
Ga0207428_1111316423300027907Populus RhizosphereAALSLLAAVWIALHAYELIWWRAARTEIRTQREMASVSSP
Ga0209006_1067286413300027908Forest SoilIALAVPALVTVGLVAAVWVSLHAYELIWWREARAERRAMRAQAS
Ga0209006_1105962213300027908Forest SoilAARVVPGLVAVALVAAVFVVLHSYELIWWRDARAELRA
Ga0307313_1011917223300028715SoilLIALTLVATVWVALHVYEIIWWREARAQTRALRVPAAS
Ga0307311_1008125613300028716SoilLIAVVWVALHTYEFVWWREARAETRALRLPPSASEQA
Ga0307298_1015765413300028717SoilVALTLMAAVWVSLHAYEIIWWREARARTRALRLPASVS
Ga0307320_1015994713300028771SoilLTLMAADWVSLHAYEIIWWREARARTRALRLPASVS
Ga0307287_1024202013300028796SoilLALIAVVWVALHAYEFVWWREARAETRALRLPPSASEQA
Ga0307305_1029078123300028807SoilVVPALIALTLVATVWVALHVYEIIWWREARAQTRALRVTAAS
Ga0307292_1021104713300028811SoilLVVPALVALALVTAVWVALHAYEIIWWREARARTRALRLPTSAS
Ga0307310_1056887833300028824SoilAVVWVALHAYEFVWWREARAETRALRLPPSASEQA
Ga0307289_1009279413300028875SoilLALVTAVWVALHAYELIWWRAARAELRAQREPASAS
Ga0307286_1017722723300028876SoilPARVPLALVAGVWVALHAYELIWWREARAQLRAQRLPSSS
Ga0307278_1002921963300028878SoilPALAALTLVAAVWVALHTYEIIWWREARAQTRALRLPASAS
Ga0307278_1010523833300028878SoilTLTLVAAVWVALHAYEIIWWREARAQTRALRLPASAS
Ga0307278_1023189313300028878SoilVVVPALVALALLAAVWVALHAYEIIWWREARARTRALRMPASAS
Ga0307304_1037457813300028885SoilALVSLTLVAAVWVALHAYEFIWWREARAQTRALRLRASPPDVTAP
Ga0247826_1083946713300030336SoilALIAVVWVALHTYEFVWWREARAETRALRLPPSASEQA
Ga0307473_1079029813300031820Hardwood Forest SoilALTLVLIVWVGLHAYEVIWWREARAQTRALRVPAS
Ga0335082_1069838223300032782SoilVPALAALAPIAAVWVVLHAYELIWWREARAEARALRA
Ga0247829_1180779423300033550SoilGALTLVATVWVALHAYELIWWREARAQTRALRLPA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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