Metagenome Family F102735

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102735
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	84 residues
Representative Sequence	AVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPEG
Number of Associated Samples	57
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.02 %
% of genes from short scaffolds (< 2000 bps)	95.05 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.436 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (40.594 % of family members)
Environment Ontology (ENVO)	Unclassified (52.475 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.337 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.30% β-sheet: 0.00% Coil/Unstructured: 28.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00498	FHA	9.90
PF08002	DUF1697	7.92
PF00291	PALP	4.95
PF02738	MoCoBD_1	3.96
PF12840	HTH_20	2.97
PF02604	PhdYeFM_antitox	1.98
PF05532	CsbD	1.98
PF13561	adh_short_C2	1.98
PF08281	Sigma70_r4_2	1.98
PF13398	Peptidase_M50B	1.98
PF12681	Glyoxalase_2	1.98
PF01988	VIT1	1.98
PF00753	Lactamase_B	0.99
PF09339	HTH_IclR	0.99
PF02012	BNR	0.99
PF10417	1-cysPrx_C	0.99
PF13191	AAA_16	0.99
PF04075	F420H2_quin_red	0.99
PF12680	SnoaL_2	0.99
PF03167	UDG	0.99
PF04978	DUF664	0.99
PF01850	PIN	0.99
PF13520	AA_permease_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	7.92
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	1.98
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	1.98
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.98
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	1.98
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.98
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.99
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.99
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.50 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.55 %
Unclassified	root	N/A	43.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.72 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples	0.99 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.97 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.98 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.99 %
uncultured Chloroflexota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	0.99 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.99 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.97 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.98 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.99 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.99 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.99 %
uncultured Chloroflexota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.97 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	1.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.98 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.99 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.99 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.99 %
uncultured Chloroflexota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.97 %
Streptacidiphilus carbonis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus carbonis	1.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.98 %
Nocardia seriolae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia seriolae	0.99 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.99 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.99 %
uncultured Chloroflexota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_102384162	Not Available	959	Open in IMG/M
3300005332\|Ga0066388_102678830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300005332\|Ga0066388_102810339	Not Available	889	Open in IMG/M
3300005332\|Ga0066388_103565432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M
3300005332\|Ga0066388_107217665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia seriolae	558	Open in IMG/M
3300005332\|Ga0066388_108202573	Not Available	521	Open in IMG/M
3300005436\|Ga0070713_100175959	Not Available	1920	Open in IMG/M
3300005436\|Ga0070713_102099195	Not Available	548	Open in IMG/M
3300005468\|Ga0070707_100405844	Not Available	1323	Open in IMG/M
3300005764\|Ga0066903_100048125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5150	Open in IMG/M
3300005764\|Ga0066903_101353131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1334	Open in IMG/M
3300005764\|Ga0066903_102298404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1041	Open in IMG/M
3300005764\|Ga0066903_105707050	All Organisms → cellular organisms → Bacteria → Terrabacteria group	654	Open in IMG/M
3300005764\|Ga0066903_106227136	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005764\|Ga0066903_108176711	Not Available	535	Open in IMG/M
3300006854\|Ga0075425_100770255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1103	Open in IMG/M
3300006871\|Ga0075434_101291996	Not Available	741	Open in IMG/M
3300006903\|Ga0075426_10160432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1624	Open in IMG/M
3300009792\|Ga0126374_10725543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	750	Open in IMG/M
3300009792\|Ga0126374_11009745	Not Available	653	Open in IMG/M
3300010043\|Ga0126380_10772982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300010043\|Ga0126380_10779205	All Organisms → cellular organisms → Bacteria → Terrabacteria group	780	Open in IMG/M
3300010043\|Ga0126380_11521773	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010046\|Ga0126384_10021342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4187	Open in IMG/M
3300010046\|Ga0126384_10711740	Not Available	891	Open in IMG/M
3300010046\|Ga0126384_10969084	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010046\|Ga0126384_11139223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300010046\|Ga0126384_11849287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300010046\|Ga0126384_12281707	Not Available	522	Open in IMG/M
3300010048\|Ga0126373_10407722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → environmental samples → uncultured Chloroflexota bacterium	1385	Open in IMG/M
3300010048\|Ga0126373_11290830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	796	Open in IMG/M
3300010048\|Ga0126373_12057037	Not Available	633	Open in IMG/M
3300010048\|Ga0126373_13213449	Not Available	509	Open in IMG/M
3300010358\|Ga0126370_10208906	Not Available	1481	Open in IMG/M
3300010358\|Ga0126370_10859848	Not Available	815	Open in IMG/M
3300010360\|Ga0126372_10239699	Not Available	1547	Open in IMG/M
3300010360\|Ga0126372_11262320	All Organisms → cellular organisms → Bacteria → Terrabacteria group	766	Open in IMG/M
3300010360\|Ga0126372_11646407	Not Available	682	Open in IMG/M
3300010360\|Ga0126372_12238491	Not Available	596	Open in IMG/M
3300010360\|Ga0126372_12403028	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010360\|Ga0126372_12996746	Not Available	524	Open in IMG/M
3300010361\|Ga0126378_10418026	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300010366\|Ga0126379_10409056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1407	Open in IMG/M
3300010376\|Ga0126381_102833597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300010376\|Ga0126381_103446792	Not Available	622	Open in IMG/M
3300010376\|Ga0126381_105162051	Not Available	500	Open in IMG/M
3300010398\|Ga0126383_10071885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2979	Open in IMG/M
3300010398\|Ga0126383_12310504	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300010398\|Ga0126383_13234390	Not Available	532	Open in IMG/M
3300012948\|Ga0126375_10379322	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1014	Open in IMG/M
3300012948\|Ga0126375_11010078	Not Available	678	Open in IMG/M
3300012948\|Ga0126375_11634485	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012971\|Ga0126369_10324307	Not Available	1551	Open in IMG/M
3300012971\|Ga0126369_12405904	Not Available	613	Open in IMG/M
3300016270\|Ga0182036_10288273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1244	Open in IMG/M
3300016319\|Ga0182033_10940044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300016371\|Ga0182034_10197751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1552	Open in IMG/M
3300016371\|Ga0182034_10871108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	773	Open in IMG/M
3300016371\|Ga0182034_11078950	Not Available	696	Open in IMG/M
3300016387\|Ga0182040_10822485	Not Available	766	Open in IMG/M
3300016422\|Ga0182039_10837830	Not Available	818	Open in IMG/M
3300016445\|Ga0182038_10188146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1613	Open in IMG/M
3300016445\|Ga0182038_11938449	Not Available	533	Open in IMG/M
3300021560\|Ga0126371_11092169	Not Available	937	Open in IMG/M
3300021560\|Ga0126371_11636643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300021560\|Ga0126371_11715484	Not Available	751	Open in IMG/M
3300021560\|Ga0126371_12123207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300021560\|Ga0126371_12567968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300025928\|Ga0207700_11665030	Not Available	563	Open in IMG/M
3300027725\|Ga0209178_1254794	Not Available	635	Open in IMG/M
3300031679\|Ga0318561_10611147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	600	Open in IMG/M
3300031680\|Ga0318574_10093139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1660	Open in IMG/M
3300031719\|Ga0306917_10116017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1944	Open in IMG/M
3300031723\|Ga0318493_10197596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300031748\|Ga0318492_10688832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300031770\|Ga0318521_10367324	Not Available	855	Open in IMG/M
3300031779\|Ga0318566_10071353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1678	Open in IMG/M
3300031781\|Ga0318547_10571442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	700	Open in IMG/M
3300031795\|Ga0318557_10470085	Not Available	578	Open in IMG/M
3300031819\|Ga0318568_10037246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2751	Open in IMG/M
3300031831\|Ga0318564_10206903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300031832\|Ga0318499_10124118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1004	Open in IMG/M
3300031859\|Ga0318527_10041543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1761	Open in IMG/M
3300031910\|Ga0306923_11080633	Not Available	866	Open in IMG/M
3300031941\|Ga0310912_10150079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1758	Open in IMG/M
3300031946\|Ga0310910_11334654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus carbonis	553	Open in IMG/M
3300031947\|Ga0310909_10426009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1114	Open in IMG/M
3300031959\|Ga0318530_10047659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1602	Open in IMG/M
3300032008\|Ga0318562_10052308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2243	Open in IMG/M
3300032009\|Ga0318563_10784831	Not Available	510	Open in IMG/M
3300032035\|Ga0310911_10643212	Not Available	615	Open in IMG/M
3300032041\|Ga0318549_10504143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300032054\|Ga0318570_10519334	Not Available	543	Open in IMG/M
3300032066\|Ga0318514_10067736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1760	Open in IMG/M
3300032068\|Ga0318553_10623576	Not Available	564	Open in IMG/M
3300032076\|Ga0306924_11813677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus carbonis	635	Open in IMG/M
3300032094\|Ga0318540_10499657	Not Available	587	Open in IMG/M
3300032261\|Ga0306920_102634124	Not Available	689	Open in IMG/M
3300033290\|Ga0318519_10467009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	757	Open in IMG/M
3300033290\|Ga0318519_10526544	Not Available	714	Open in IMG/M
3300033290\|Ga0318519_10866417	Not Available	557	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.03%
Host-Associated	Host-Associated	2.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.03%
Plants	Host-Associated → Plants	2.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.19%
Loam	Environmental → Terrestrial → Soil → Loam	15.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	40.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1023841621	3300005332	Tropical Forest Soil	AVQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNVENTSKLATQSDQILDLQKQQIEMLKSLNGIQAAIDGIQAQLGDGPEG*
Ga0066388_1026788302	3300005332	Tropical Forest Soil	CLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTDKLATQYAQLLDLQKQQIDMLKSLNGIQVAIDDIQARLADSPKG*
Ga0066388_1028103393	3300005332	Tropical Forest Soil	VQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNEENTDKLATQYDQILDLQKQQIEMLKSLNGIQVAIDDIQARLADTPRG*
Ga0066388_1035654321	3300005332	Tropical Forest Soil	NLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVDNTNKLATQADQILDLQKQQLDMLKSLNVIQVAIEGIQARLADGPND*
Ga0066388_1072176651	3300005332	Tropical Forest Soil	KVNAVIALHTEGNTDKLAVIAQHNEENTNKLAAQSDQILDLQKQQIEMLKSLNGIQAAIDSIQARLAGGPNG*
Ga0066388_1082025732	3300005332	Tropical Forest Soil	VQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNEANTDKLATQYDQLLDLQKQQIEMLKSLNGIQVAIDDIQARLADTPRG*
Ga0070713_1001759592	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LSRWHWGGHVLDKVNAVVALHTEDNTDKLAVIAQHNVENTNKLAAQYDQILDLQKQQLQMLKSLNGIQAAIDGIQARLTGGPNG*
Ga0070713_1020991952	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVANTNKLATQADQLLDLQKQQIDMLKSLDGIQAAIDGIQARLADGPEG*
Ga0070707_1004058441	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NRGDKVNAVIALHTEDNTDKLAVIAQHNVTNTSKLATQADQLLDLQKQQIDMLKSLDGIQAAIDGIQARLADGPEG*
Ga0066903_1000481251	3300005764	Tropical Forest Soil	QGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTTKLATQSDQILDLQKQQVEMLKSLNGIQVAIDGIQARLADGPES*
Ga0066903_1013531311	3300005764	Tropical Forest Soil	AVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIDGIQARLADGPED*
Ga0066903_1022984041	3300005764	Tropical Forest Soil	CLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTNKLATQTDQILDLQKQQLDMLKSLNVIQVAIEGIQARLADGPND*
Ga0066903_1057070501	3300005764	Tropical Forest Soil	AVQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNVKNTSKLATQSDQILDLQKQQMEMLKSLNDIQVAIDGIQARLPDGPKS*
Ga0066903_1062271361	3300005764	Tropical Forest Soil	IILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVDNTNKLAAQSDQLLDLQKQQMEMLKSLNGIQVAIDGIQAQLPDGPMG*
Ga0066903_1081767111	3300005764	Tropical Forest Soil	VQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEGNTNKLATQYDQILDLQKQQLDMLKSLNVIQVAVEGIQARLADGPND*
Ga0075425_1007702551	3300006854	Populus Rhizosphere	AVIALHTEDNTDKLAVIAQHNVENTSKLATQADQLLDLQKQQIEMLKSLDGIQAAIGGIQARLADGPKG*
Ga0075434_1012919961	3300006871	Populus Rhizosphere	ISANRGDKVNAVIALHTEDNTDKLAVIAQHNVANTSKLATQADQLLDLQKQQIDMLKSLDGIQAAIDGIQARLADGPEG*
Ga0075426_101604321	3300006903	Populus Rhizosphere	ISANRGDKVNAVIALHTEDNTDRLAVIAQHNVENTNKLGTQYDQILDLQRQQLEMLKSLNGIQAAIDGIQARLTGGPNG*
Ga0126374_107255431	3300009792	Tropical Forest Soil	LSCLAAIQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVDNTNKLAAQSDQLLDLQKQQMEMLKSLNGIQVAIDGIQAQLPDGPMG*
Ga0126374_110097452	3300009792	Tropical Forest Soil	SCLAAVQGIILQISANRSDKVNAVIALHTEDNTDKLAAMARHVEGNTDKLAVQTGQLLDLQKQQMDLLKSLDAIQVAIDGIQARLASGPHG*
Ga0126380_107729821	3300010043	Tropical Forest Soil	LCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTNKLATQTDQILDLQKQQLDMLKSLNVIQVAIEGIQARLADGPND*
Ga0126380_107792051	3300010043	Tropical Forest Soil	ISANRGDKVNAVIALHTEGNTDKLAVIAQHNVKNTSKLATQSDQILDLQKQQMEMLKSLNDIQVAIDGIQARLPDGPKS*
Ga0126380_115217732	3300010043	Tropical Forest Soil	LQISANRGDKVNAVIALHTEGNTDKLAVIAQHNEANTDKLATQYDQLLDLQKQQIEMLKSLNGIQVAIDGIQARLADGPKG*
Ga0126384_100213425	3300010046	Tropical Forest Soil	CLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVVAQRNEENTNKLATHYDQLLDLQKQQIEMLKSLNGIQAAIDGIQARLDAGRKG*
Ga0126384_107117402	3300010046	Tropical Forest Soil	GDKVNAVIALHTEGNTDKLAVIAQHNEANTDKLATQYDQLLDLQKQQIEMLKSLNGIQVAIDDIQARLADTPKG*
Ga0126384_109690841	3300010046	Tropical Forest Soil	IILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTNKLATQADQILDLQKQQLDMLKSLSVIQVAIEGIQARLADGPND*
Ga0126384_111392231	3300010046	Tropical Forest Soil	NLCLSCLAAVQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNEENTNKLAAQSDQILDLQKQQIEMLKSLNGIQAAIDGIQAQLGDGSEG*
Ga0126384_118492871	3300010046	Tropical Forest Soil	KLAVIAQHNEENTNKLAVITQHNEENTDKLATQSDQILDLQKQQIEMLKSLSGIRVAIDGLQARLADRSEG*
Ga0126384_122817071	3300010046	Tropical Forest Soil	QGIILQISANRGDKVNAVIALHTEDNTDKLAIIAQHNVDNTNKLAAQSDQLLDLQKQQMEMLKSLNGIQVAIDGIQAQLPDGPMG*
Ga0126373_104077222	3300010048	Tropical Forest Soil	QISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIRAQLADGPEG*
Ga0126373_112908301	3300010048	Tropical Forest Soil	GIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQKQQLDMLKSLDGIQVAIDGIRARLADGPED*
Ga0126373_120570371	3300010048	Tropical Forest Soil	CLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAEHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIEAAIDGIQARLADGPEG*
Ga0126373_132134491	3300010048	Tropical Forest Soil	CLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTDKLATQYAQLLDLQNQQIGMLKSLNGIQVAIDDIQARLADNPKG*
Ga0126370_102089061	3300010358	Tropical Forest Soil	NRGDKVNAVIALHTEDNTDKLAVIAQHNVESTNKLAAQSDQILDLQKQQIEMLKSLNGIQVAIDGIQARLADGPEG*
Ga0126370_108598481	3300010358	Tropical Forest Soil	NLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTNKLATQYDQLLDLQKQQLEMLKSLDGIQVAIDGIQARLAGGAEG*
Ga0126372_102396991	3300010360	Tropical Forest Soil	NLCLSCLAAVQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNVENTSKLANQSDQLLDLQKQQMEMLKSLNGIQVAIDGIQARLADGPKG*
Ga0126372_112623202	3300010360	Tropical Forest Soil	AAVQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNVKNTSKLATQSDQILDLQKRQMEMLKSLNDIQVAIDGIQARLPDGPKS*
Ga0126372_116464072	3300010360	Tropical Forest Soil	AAVQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNEENTNKLAVITQHNEENTNKLGTQSDQILDLQKQQIEMLKSLSGIQVAIDGLQARLADRSEG*
Ga0126372_122384911	3300010360	Tropical Forest Soil	NAVIALHTEDNTDKLAVIAQHNVDNTNKLATQNDQLLDLQKQQMEMLKSLSANQAAIDDIQVRLADGPKG*
Ga0126372_124030282	3300010360	Tropical Forest Soil	DKVNAVIALHTEDNTDKLAVIAQHNVDNTNKLAAQSDQLLDLQKQQMEMLKSLNGIQVAIDGIQAQLPDGPIG*
Ga0126372_129967461	3300010360	Tropical Forest Soil	KVNAVIAVHTEHNTDKLAVIAQHNEENTSRFAAQLLDLQKQQMEMLKSLNGVQVAIEGIQARLADRPEG*
Ga0126378_104180262	3300010361	Tropical Forest Soil	CLAAVQGIILQISANRGDKVNAVIALHTENNTDKLAVIAQHNVDNTDKLATQNDQLLDLQKQQIEMLKSLNGIQAAIDGIEARLADGPKG*
Ga0126379_104090563	3300010366	Tropical Forest Soil	VIALHTEGNTDKLAIIAQHNEENTDKLATQSDQILDLQKQQIEMLKSLSGIQVAIDGLQARLADRSEG*
Ga0126381_1028335971	3300010376	Tropical Forest Soil	RGDKVNAVIALHTENNTDNLAVVARHNEENTNKLATQYDQLLDLQKQQIEMLKSLNGIQVAIDGIQARLADGPKG*
Ga0126381_1034467921	3300010376	Tropical Forest Soil	NRGDKVNAVIALHTEDNTDKLAVIAQHNVDNTDKLATQNDQLLDLQKQQMEMLKSLNGIQAAIDGIQARLADAPKG*
Ga0126381_1051620511	3300010376	Tropical Forest Soil	LLNLCLSCLAAVQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIEGIQARLADGPED*
Ga0126383_100718851	3300010398	Tropical Forest Soil	VQGIILQISANRGDKVNAVIALHTEGNTDKLAVIAQHNEENTNKLAVITQHNEENTDKLATQSDQILDLQKQQIEMLKSLSGIQVAIDGLQARLADRSEG*
Ga0126383_123105042	3300010398	Tropical Forest Soil	GDKVNAVIALHTEDNTDKLAVIAQHNVESTNKLTAHSDQILKLQRQQIEMLKSLSAIQVAIDGIQSRLADGPKG*
Ga0126383_132343901	3300010398	Tropical Forest Soil	LNLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVVAQHNEVNTNKLATQYDQLLDLQKQQIEMLKSLNGIQAAIDGIQARLDAGRKG*
Ga0126375_103793221	3300012948	Tropical Forest Soil	VIALHTEGNTDKLAVIAQHNVKNTSKLATQSDQILDLQKRQMEMLKSLNDIQVAIDGIQARLPDGPKS*
Ga0126375_110100781	3300012948	Tropical Forest Soil	SANRGDKVNAVIALHTEDNTDKLAVIAHHNEENTNKLATQADQILDLQKQQIEMLKSLNGIQVAIDGIQARLADGPKG*
Ga0126375_116344851	3300012948	Tropical Forest Soil	NAVIALHTEDNTDKLAVIAQHNVDNTNKLAAQSDQLLDLQKQQMEMLKSLNGIQVAIDGIQAQLPDGPMG*
Ga0126369_103243072	3300012971	Tropical Forest Soil	SCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTTKLATQSDQILDLQKQQVEMLKSLNGIQVAIDGIQARLADGPES*
Ga0126369_124059041	3300012971	Tropical Forest Soil	NLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEESTNKLAAQSDQILDLQKQQLDMLKSLDGIQVAIDGIRARLADGPED*
Ga0182036_102882733	3300016270	Soil	CLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNAANTNKLAAQSDQILDLQRQQIEMLKSLNGIEAAIDGIHARLADGPEG
Ga0182033_109400442	3300016319	Soil	AVIALHTEDNTDKLAVIGQHNVENTNKLATQYDQLLDLQKQQLEMLKSLNGIQVAIEGIQARLADSPGD
Ga0182034_101977513	3300016371	Soil	LNLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGHQVAIDGIRARLADGPED
Ga0182034_108711082	3300016371	Soil	QGIILQISANRGDKVNAVIALHTEDNTDKLAVIGQHNVENTNKLATQYDQLLDLQKQQLEMLKSLNGIQVAIEGIQARLADSPGD
Ga0182034_110789501	3300016371	Soil	DKVNAVIALHTEDNTDRLAVLAQHNVDNTNKLATQYDQLLDLQKQQIEMLKSLNSIQVAIDGIQARLADGPKG
Ga0182040_108224851	3300016387	Soil	LLNLCLSCLAAVQGIILQISANRGDKVNAVISLHTEDNTDKLAVIAQHNVENTNKLATQYDQLLDLQKQQIEMLKSLDGIQAAIDGIQARLADGPKD
Ga0182039_108378302	3300016422	Soil	GDKVNAVIALHTEDNTDKLAVIAQHNVENTNKLATQTDQLLDLQRQQLDMLKSLTGIQVAIDGIQARLADGPED
Ga0182038_101881461	3300016445	Soil	GIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIDGIRARLADGPED
Ga0182038_119384491	3300016445	Soil	ALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLRSLNGIQVAIESIQARLPDGLED
Ga0126371_110921692	3300021560	Tropical Forest Soil	GIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTEKLATQYDQILDLQKQQLDMLKSVNVIQVAVEGIQARLADGPND
Ga0126371_116366431	3300021560	Tropical Forest Soil	NLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIEGIQARLADGPED
Ga0126371_117154841	3300021560	Tropical Forest Soil	QGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTDKLATQYDQLLDLQKQQIDMLKSLNGIQVAIDDIQARLADSPKG
Ga0126371_121232071	3300021560	Tropical Forest Soil	SANRGDKVNAVIALHTEDNTDKLAVIAQHNEESTNKLAAQSDQILDLQKQQLDMLKSLDGIQVAIDGIRARLADGPED
Ga0126371_125679681	3300021560	Tropical Forest Soil	EGNTDKLAVIAQHNEENTNKLAVITQHNEENTDKLATQSDQILDLQKQQIEMLKSLSGIQVAIDGLQARLADRSEG
Ga0207700_116650301	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LSRWHWGGHVLDKVNAVVALHTEDNTDKLAVIALHNVENTNKLAAQYDQILDLQKQQLQMLKSLNGIQAAIDGIQARLTGGPNG
Ga0209178_12547941	3300027725	Agricultural Soil	QGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTSKLATQADQLLDLQKQQIEMLKSLDGIQAAIGGIQARLADGPKG
Ga0318561_106111471	3300031679	Soil	DKVNAVIALHTEDNTDKLAVIAQHNAENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPES
Ga0318574_100931394	3300031680	Soil	NLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPDG
Ga0306917_101160175	3300031719	Soil	AAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNAANTNKLAAQSDQILDLQRQQIEMLKSLNGIEAAIDGIHARLADGPEG
Ga0318493_101975961	3300031723	Soil	LNLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPDG
Ga0318492_106888322	3300031748	Soil	LQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIDGIRARLADGPED
Ga0318521_103673241	3300031770	Soil	VQGIILQISANRGDKVNAVIALHTEDNTDRLAVLAQHNVDNTNKLATQYDQLLDLQKQQIEMLKSLNSIQVAIDGIQARLADGPKG
Ga0318566_100713531	3300031779	Soil	GDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPES
Ga0318547_105714421	3300031781	Soil	NLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIDGIRARLADGPED
Ga0318557_104700851	3300031795	Soil	CLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIEAAIDGIHARLADGPEG
Ga0318568_100372461	3300031819	Soil	AVIALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIDGIRARLADGPED
Ga0318564_102069032	3300031831	Soil	AVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPEG
Ga0318499_101241181	3300031832	Soil	LQISANRGDKVNAVIALHTEDNTDKLAVIAQHNAANTNKLAAQSDQILDLQRQQIEMLKSLNGIEAAIDGIHARLADGPEG
Ga0318527_100415434	3300031859	Soil	GIILQISANRGDKVNAVIALHTEDNTDKLAVIGQHNVENTNKLATQYDQLLDLQKQQLEMLKSLNGIQVAIEGIQARLADSPGD
Ga0306923_110806332	3300031910	Soil	GIILQISANRGDKVNAVIALHTENNTDKLAVIAQHNVDHTDKLATQYDQLLDLQKQQIEMLKSLSGIQAAIDAIQARLADGPKG
Ga0310912_101500793	3300031941	Soil	LAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIGQHNVENTNKLATQYDQLLDLQKQQLEMLKSLNGIQVAIEGIQARLADSPGD
Ga0310910_113346541	3300031946	Soil	CLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPES
Ga0310909_104260091	3300031947	Soil	CLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPEG
Ga0318530_100476595	3300031959	Soil	LCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIGQHNVENTNKLATQYDQLLDLQKQQLEMLKSLNGIQVAIEGIQARLADSPGD
Ga0318562_100523081	3300032008	Soil	QISANRGDKVNAVIALHTEDNTDKLAAMAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIEGIRARLADGPED
Ga0318563_107848312	3300032009	Soil	IILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIDGIRARLADGPED
Ga0310911_106432122	3300032035	Soil	NLCLSCLAAVQGIILQISANRGDKVNAVISLHTEDNTDKLAVIAQHNVENTNKLATQYDQLLDLQKQQIEMLKSLDGIQAAIDGIQARLADGPKD
Ga0318549_105041431	3300032041	Soil	QISANRGDKVNAVIALHTEDNTDKLAAMAQHNVENTSKLAAQSDQILDLQKQQLDMLKSLNGIQVAIDGIRARLADGPED
Ga0318570_105193341	3300032054	Soil	IILQISANRGDKVNAVIALHTEDNTDRLAVLAQHNVDNTNKLATQYDQLLDLQKQQIEMLKSLNSIQVAIDGIQARLADGPKG
Ga0318514_100677365	3300032066	Soil	LNLCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNAANTNKLAAQSDQILDLQRQQIEMLKSLNGIEAAIDGIHARLADGPEG
Ga0318553_106235761	3300032068	Soil	SCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNAANTNKLAAQSDQILDLQRQQIEMLKSLNGIEAAIDGIHARLADGPEG
Ga0306924_118136771	3300032076	Soil	LCLSCLAAIQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVDNTNKLAAQNDQLLDLQKQQIEMLKSLSGIQAAIDGIQARLADGPDG
Ga0318540_104996571	3300032094	Soil	GDKVNAVIALHTENNTDKLAVIAQHNVDHTDKLAAQNDQLLDLQKQQIEMLKSLSGIQAAIDGIQARLADDPKG
Ga0306920_1026341241	3300032261	Soil	IILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNVENTNKLATQTDQLLDLQRQQLDMLKSLTGIQVAIDGIQARLADGPED
Ga0318519_104670091	3300033290	Soil	ILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPDG
Ga0318519_105265441	3300033290	Soil	VIALHTESNTDKLAVIAQHNVDHTDKLAAQNDQLLDLQKQQIDMLKSLGGIQAAIDGIQARLADDPKG
Ga0318519_108664171	3300033290	Soil	LCLSCLAAVQGIILQISANRGDKVNAVIALHTEDNTDKLAVIAQHNEENTNKLAAQSDQILDLQRQQIEMLKSLNGIQAAIDGIQARLADGPEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102735

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences