Metagenome Family F102630

Basic Information
Family ID	F102630
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	76 residues
Representative Sequence	MLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Number of Associated Samples	29
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	53.54 %
% of genes near scaffold ends (potentially truncated)	67.33 %
% of genes from short scaffolds (< 2000 bps)	96.04 %
Associated GOLD sequencing projects	23
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (99.010 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake (44.555 % of family members)
Environment Ontology (ENVO)	Unclassified (45.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Hypersaline (saline) (62.376 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.92% β-sheet: 16.83% Coil/Unstructured: 75.25%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00255	GSHPx	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
All Organisms	root	All Organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Dictyochophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Rhizochromulinales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Rhizochromulinales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Rhizochromulina	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Rhizochromulinales → Rhizochromulina	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Rhizochromulina marina	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Rhizochromulinales → Rhizochromulina → Rhizochromulina marina	0.99 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005912\|Ga0075109_1098174	Not Available	1006	Open in IMG/M
3300005912\|Ga0075109_1145398	Not Available	775	Open in IMG/M
3300005912\|Ga0075109_1219706	Not Available	585	Open in IMG/M
3300005912\|Ga0075109_1242451	Not Available	547	Open in IMG/M
3300005913\|Ga0075108_10023188	Not Available	2406	Open in IMG/M
3300005913\|Ga0075108_10047480	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Rhizochromulinales → Rhizochromulina → Rhizochromulina marina	1627	Open in IMG/M
3300005913\|Ga0075108_10053675	Not Available	1520	Open in IMG/M
3300005913\|Ga0075108_10055792	Not Available	1488	Open in IMG/M
3300005913\|Ga0075108_10060686	Not Available	1420	Open in IMG/M
3300005913\|Ga0075108_10093875	Not Available	1104	Open in IMG/M
3300005913\|Ga0075108_10132794	Not Available	897	Open in IMG/M
3300005913\|Ga0075108_10150559	Not Available	830	Open in IMG/M
3300005913\|Ga0075108_10155883	Not Available	813	Open in IMG/M
3300005913\|Ga0075108_10180636	Not Available	741	Open in IMG/M
3300005913\|Ga0075108_10191202	Not Available	714	Open in IMG/M
3300005913\|Ga0075108_10194841	Not Available	706	Open in IMG/M
3300005913\|Ga0075108_10205837	Not Available	681	Open in IMG/M
3300005913\|Ga0075108_10211062	Not Available	671	Open in IMG/M
3300005913\|Ga0075108_10230987	Not Available	632	Open in IMG/M
3300005913\|Ga0075108_10243638	Not Available	610	Open in IMG/M
3300005913\|Ga0075108_10246209	Not Available	606	Open in IMG/M
3300005913\|Ga0075108_10247277	Not Available	604	Open in IMG/M
3300005913\|Ga0075108_10267096	Not Available	575	Open in IMG/M
3300005913\|Ga0075108_10294316	Not Available	538	Open in IMG/M
3300005913\|Ga0075108_10317702	Not Available	512	Open in IMG/M
3300005914\|Ga0075117_1142726	Not Available	690	Open in IMG/M
3300007074\|Ga0075110_1111404	Not Available	564	Open in IMG/M
3300007519\|Ga0105055_10453565	Not Available	1095	Open in IMG/M
3300007519\|Ga0105055_10496047	Not Available	1024	Open in IMG/M
3300007519\|Ga0105055_10508759	Not Available	1004	Open in IMG/M
3300007519\|Ga0105055_10518526	Not Available	990	Open in IMG/M
3300007519\|Ga0105055_10856031	Not Available	678	Open in IMG/M
3300007519\|Ga0105055_10983127	Not Available	613	Open in IMG/M
3300007519\|Ga0105055_10990701	Not Available	610	Open in IMG/M
3300007519\|Ga0105055_11018210	Not Available	598	Open in IMG/M
3300007519\|Ga0105055_11247372	Not Available	517	Open in IMG/M
3300007520\|Ga0105054_10332484	Not Available	1348	Open in IMG/M
3300007520\|Ga0105054_10745955	Not Available	724	Open in IMG/M
3300007520\|Ga0105054_10749703	Not Available	722	Open in IMG/M
3300007520\|Ga0105054_10834806	Not Available	665	Open in IMG/M
3300007520\|Ga0105054_10870160	Not Available	644	Open in IMG/M
3300007520\|Ga0105054_11130346	Not Available	532	Open in IMG/M
3300007522\|Ga0105053_10392450	Not Available	1193	Open in IMG/M
3300007522\|Ga0105053_10613596	Not Available	847	Open in IMG/M
3300007522\|Ga0105053_10844437	Not Available	663	Open in IMG/M
3300007522\|Ga0105053_10989154	Not Available	590	Open in IMG/M
3300007522\|Ga0105053_11026068	Not Available	574	Open in IMG/M
3300007522\|Ga0105053_11080099	Not Available	553	Open in IMG/M
3300007522\|Ga0105053_11174312	Not Available	521	Open in IMG/M
3300007522\|Ga0105053_11180185	Not Available	519	Open in IMG/M
3300007722\|Ga0105051_11090284	Not Available	569	Open in IMG/M
3300012272\|Ga0136586_1161305	Not Available	554	Open in IMG/M
3300012272\|Ga0136586_1167953	Not Available	544	Open in IMG/M
3300022825\|Ga0222669_1050764	Not Available	664	Open in IMG/M
3300022832\|Ga0222707_1002269	Not Available	3410	Open in IMG/M
3300022832\|Ga0222707_1027076	Not Available	737	Open in IMG/M
3300022841\|Ga0222644_1041099	Not Available	552	Open in IMG/M
3300022844\|Ga0222687_1091631	Not Available	507	Open in IMG/M
3300022865\|Ga0222668_1050355	Not Available	597	Open in IMG/M
3300022867\|Ga0222629_1036539	Not Available	760	Open in IMG/M
3300022867\|Ga0222629_1066329	Not Available	549	Open in IMG/M
3300023054\|Ga0222648_1019144	Not Available	1685	Open in IMG/M
3300023054\|Ga0222648_1089848	Not Available	569	Open in IMG/M
3300023227\|Ga0222690_1018580	Not Available	912	Open in IMG/M
3300023230\|Ga0222709_1041375	Not Available	597	Open in IMG/M
3300023231\|Ga0222689_1044495	Not Available	566	Open in IMG/M
3300023243\|Ga0222630_1105336	Not Available	505	Open in IMG/M
3300023429\|Ga0222710_1057351	Not Available	655	Open in IMG/M
3300023501\|Ga0222686_1056576	Not Available	526	Open in IMG/M
3300025502\|Ga0208903_1109162	Not Available	610	Open in IMG/M
3300025513\|Ga0208413_1067829	Not Available	1053	Open in IMG/M
3300025513\|Ga0208413_1120211	Not Available	687	Open in IMG/M
3300025513\|Ga0208413_1129893	Not Available	647	Open in IMG/M
3300025513\|Ga0208413_1133413	Not Available	634	Open in IMG/M
3300025513\|Ga0208413_1175249	Not Available	511	Open in IMG/M
3300025513\|Ga0208413_1180141	Not Available	500	Open in IMG/M
3300025601\|Ga0208768_1050812	Not Available	1228	Open in IMG/M
3300025601\|Ga0208768_1091479	Not Available	871	Open in IMG/M
3300025601\|Ga0208768_1104185	Not Available	803	Open in IMG/M
3300025601\|Ga0208768_1110645	Not Available	772	Open in IMG/M
3300025601\|Ga0208768_1112358	Not Available	765	Open in IMG/M
3300025601\|Ga0208768_1140668	Not Available	661	Open in IMG/M
3300025601\|Ga0208768_1141386	Not Available	659	Open in IMG/M
3300025601\|Ga0208768_1189197	Not Available	539	Open in IMG/M
3300025601\|Ga0208768_1192994	Not Available	531	Open in IMG/M
3300025603\|Ga0208414_1101297	Not Available	756	Open in IMG/M
3300027832\|Ga0209491_10456083	Not Available	868	Open in IMG/M
3300027832\|Ga0209491_10601285	Not Available	669	Open in IMG/M
3300027832\|Ga0209491_10625587	Not Available	644	Open in IMG/M
3300027832\|Ga0209491_10694686	Not Available	581	Open in IMG/M
3300027832\|Ga0209491_10702385	Not Available	575	Open in IMG/M
3300027848\|Ga0209390_10200689	Not Available	1720	Open in IMG/M
3300027848\|Ga0209390_10815015	Not Available	509	Open in IMG/M
3300032435\|Ga0335398_10480612	Not Available	923	Open in IMG/M
3300032435\|Ga0335398_10508568	Not Available	877	Open in IMG/M
3300032435\|Ga0335398_10523216	Not Available	855	Open in IMG/M
3300032435\|Ga0335398_10596252	Not Available	757	Open in IMG/M
3300032435\|Ga0335398_10741101	Not Available	619	Open in IMG/M
3300032435\|Ga0335398_10881985	Not Available	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	62.38%
Freshwater	Environmental → Aquatic → Freshwater	37.62%

Habitat	Taxonomy	Distribution
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	62.38%
Ice	Environmental → Aquatic → Freshwater → Ice	37.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	62.38%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	37.62%

Habitat	Taxonomy	Distribution
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	44.55%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	37.62%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	16.83%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental	Open in IMG/M
3300005913	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1	Environmental	Open in IMG/M
3300005914	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ	Environmental	Open in IMG/M
3300007074	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300012272	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562	Environmental	Open in IMG/M
3300022825	Saline water microbial communities from Ace Lake, Antarctica - #730	Environmental	Open in IMG/M
3300022832	Saline water microbial communities from Ace Lake, Antarctica - #1574	Environmental	Open in IMG/M
3300022841	Saline water microbial communities from Ace Lake, Antarctica - #291	Environmental	Open in IMG/M
3300022844	Saline water microbial communities from Ace Lake, Antarctica - #1163	Environmental	Open in IMG/M
3300022865	Saline water microbial communities from Ace Lake, Antarctica - #728	Environmental	Open in IMG/M
3300022867	Saline water microbial communities from Ace Lake, Antarctica - #1	Environmental	Open in IMG/M
3300023054	Saline water microbial communities from Ace Lake, Antarctica - #335	Environmental	Open in IMG/M
3300023227	Saline water microbial communities from Ace Lake, Antarctica - #1234	Environmental	Open in IMG/M
3300023230	Saline water microbial communities from Ace Lake, Antarctica - #1692	Environmental	Open in IMG/M
3300023231	Saline water microbial communities from Ace Lake, Antarctica - #1231	Environmental	Open in IMG/M
3300023243	Saline water microbial communities from Ace Lake, Antarctica - #3	Environmental	Open in IMG/M
3300023429	Saline water microbial communities from Ace Lake, Antarctica - #1696	Environmental	Open in IMG/M
3300023501	Saline water microbial communities from Ace Lake, Antarctica - #1159	Environmental	Open in IMG/M
3300025502	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ (SPAdes)	Environmental	Open in IMG/M
3300025513	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD (SPAdes)	Environmental	Open in IMG/M
3300025601	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1 (SPAdes)	Environmental	Open in IMG/M
3300025603	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE (SPAdes)	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300032435	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075109_10981741	3300005912	Saline Lake	LQVDRNLMLYLPRLAVLVTIVADRPGAWFPGPLGPYQAWFPGICLSRDLKHAKVPVNPMKTPFCFGVFWGVIFKKKLFLQVDSRIT*
Ga0075109_11453981	3300005912	Saline Lake	MHLFQLGFGLGPHLQVDRNLMLYLPRLAVLVSIAADRPGAWFPGPLGPYQAWFPGIDLSRDFKRAKVPGNPMKSPFCFGVFWG
Ga0075109_12197061	3300005912	Saline Lake	MLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGV
Ga0075109_12424511	3300005912	Saline Lake	MLYLPRLAVLVSIEADRPGAWFPGPLGPYQAWFPAIYLSRDFDLVKVPGNPMKSPFGFGVFLGVKFKKK
Ga0075108_100231882	3300005913	Saline Lake	MLYLPRLAVLVTIVVDRPGAWFPGQLDPYQAWFPGICLSRDFKHAKVPVNPMKTPFCFGVFWG
Ga0075108_100474802	3300005913	Saline Lake	MPRNATAFVVDQSETTTEVDRTLMLYLPRLAVLVTIVANRPGAWFPGQLGPYQALFPGICLIRDFKHAKVPVNPMKTPFCFGVFWGVIFKKKLFSRVDSRIT*
Ga0075108_100536754	3300005913	Saline Lake	MLYLPRLTVLVTIVADRPGAWFPGPLGQYQAWFPGICLSRDFKHAKVPVNTMKTSFCFGVFWGVIFKKNYFRK*
Ga0075108_100557921	3300005913	Saline Lake	MVELQVDRNLAGYLPRLAVLVSIAADRPGAWFPGPLGPYQAWFPGIGLSRDFKRAKVPGNPMKSPFCFGVFWGVIFKKI*
Ga0075108_100606861	3300005913	Saline Lake	MLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLIRDFKLAKVPGNPMETPFCFGVFWGVI
Ga0075108_100938751	3300005913	Saline Lake	MLYLPRLTVLVTIEADRPGAWFPGILGPYQAFVSGIYLSRDFERAKVPGNPMKSPFCFGVFWG*
Ga0075108_101327941	3300005913	Saline Lake	MLYLPRLAVLVTIVADQLGAWFPGPLGPYQAWFPGICLSRDFKHAKVPVNPMKTPFCFGVFWGSYSKKNYFRK*
Ga0075108_101505592	3300005913	Saline Lake	MLYLPRLAVLVTIAADRPGAWFPGPLGPYQAWFPGIDLSRDFKRAKVPGNPMKSPFCFGVFWG
Ga0075108_101558833	3300005913	Saline Lake	VDRNLALYLPRLTVLVSIEADRPGAWFPGSLGPYLTWFPAIYLSRDFGLVKVPENPMESPFGFGVFLGVKFKKNLFLTVDSRIT*
Ga0075108_101806361	3300005913	Saline Lake	MLHLPRQNVLVTIVADRPEAWFPGPLGPFLILFSAICLNRDFKRAKVPGNLMKSPFCFGVFWGVIFKKN
Ga0075108_101912021	3300005913	Saline Lake	RNLALYLPRLTVLVSIEADRPGAWFPGPLGPYLTWFPAICLCRDFDLVKVPGNPMKSPFGFGVFWGVKFKKKKLTVDSRIT*
Ga0075108_101948411	3300005913	Saline Lake	MMYLPRLTVLVTIVADRPGAWFPGPLGPYPTWFPAICLSRDFIRAKVPGNPMKSPFCYDPQRK*
Ga0075108_102058371	3300005913	Saline Lake	MLYLPRLAVLVTIVADRPEAWFPGPLGPYQAWFSGICLSRDFKHAKVPVNPMKTPFCFGDFWGVI*
Ga0075108_102110622	3300005913	Saline Lake	VDRNLMLYLPQLSVLVAIVADRPGASFSVLLGSYLTSFPAICLSRDFRRSKVPGNSMKS
Ga0075108_102309872	3300005913	Saline Lake	MILNQKVPNLTNYRRLTVLVSIEADRPGAWFPGPLGPYQAWFPAIYLSRDFDLVKVPGNPMKSPFGFGVFLGVKFK
Ga0075108_102436381	3300005913	Saline Lake	DRNLALYLPRLTVLVSIEADRPGAWFPGPLGPYQAWFPAIYLSRDFDLVKVPGNPMKSPFGFGVFWG*
Ga0075108_102462091	3300005913	Saline Lake	VDRNLMLYLPRLAVLVTIVADRPGAWFPGPLGPYQAWFPGICLSRDLKHAKVPVNPMKTPFCFGVFWGVIFKKKLFLQVDSRIT*
Ga0075108_102472772	3300005913	Saline Lake	MLYLTVLVPKVTVTIVADRPGAWFPGSLGSYLTFSPAMCLSRDFKRAKVPGNPMK
Ga0075108_102670961	3300005913	Saline Lake	LYLPRLAVLVSIEADRPGAWFPGPLGPYQAWFPGIQLSRDFERVKVPGTPTESPFCFCFFWGVEFIFKKMRA*
Ga0075108_102943161	3300005913	Saline Lake	MLYLPRLTVLVTIVADRPGAWFPGLLGPYITWFPEICLSRDFKRAKVPGNPMKSPFCFGVFW
Ga0075108_103177021	3300005913	Saline Lake	MLYLPQLTVLVTIEADRPGAGFPGSLGPYLTWFPAICLSRDFKRAKVPGNPMKTPFCFGVFWGVIFKK
Ga0075117_11427263	3300005914	Saline Lake	RNLMLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK*
Ga0075110_11114042	3300007074	Saline Lake	MLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFDLVKVPGNPMKSPFGFGVFLGVKFKKNLFLTEDSRIT*
Ga0105055_104151593	3300007519	Freshwater	MLCPPRLAVLVNIEADRPGAWFPVPFGKFHAWFHGIGISRDFERVKVPVNPMKSPFCFGV
Ga0105055_104535652	3300007519	Freshwater	MLYLPRLTLLVSIETDRPGAWFPGPLGPYQAWFPAIWLSRDFKRAKVPVNPMKTPFCFGVFLGVKFKKKTIFAS*
Ga0105055_104960472	3300007519	Freshwater	VDRNLALYLPRLTVLVSIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVK
Ga0105055_105087592	3300007519	Freshwater	MLYLLRLAVFVTIEADRPGAWFSGQLDPYQALFPGSCLNRDLKHAKMPVNPMKTAFILASFGGSYSKKYILQLDSRIT*
Ga0105055_105185261	3300007519	Freshwater	MLYLPRLAVLVRIEADRPGAWFPGLLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVK
Ga0105055_108560312	3300007519	Freshwater	MLYLPRMADLVTIVADQPGAWFPSPLGSYLTRFPAICLSRDFKRAKVPGNPMKIPFCFGVFWGVIFQNILFLQVDS
Ga0105055_109831271	3300007519	Freshwater	MLQVDRNLMLHLPRLIILVTIVADRPGAWFPGPLGPYLTWFPAICLSRDFKRAKVPGNPMKSSFCFGVFWGIKLKIFYFREHTAESR*
Ga0105055_109907011	3300007519	Freshwater	MLYLPRLTVLFTIEADRPGAWFPGPLGPYQACFPGICLSRDFERAKVPENPMKSPFCVDVFLVPYSKKLFRK*
Ga0105055_110182101	3300007519	Freshwater	MLYLPRLSVLVTIVADRPGAWFPGPLGPYQAWFPGICLSRDFKHAKVPVNSMKAPFC
Ga0105055_112473721	3300007519	Freshwater	MLYLPRLAVLVRTETDRPGAWFPGPLGLYLTLFPAIWLSRDFKHAKVPRNPMETPFCFGVFWGSYSKNKNL
Ga0105054_103324842	3300007520	Freshwater	MFLEVHHTKSDPKSMRVMPLCLQVDRNLMLYLPRLAVLVTIEADRLGAWFPGPFGPYQALFPGICLSRDFKLAEVPVNTKKTPFCFGVFWGVLFKKIYFRE*
Ga0105054_107459551	3300007520	Freshwater	MVWSEYTILDQVIRIYRVDRNLALYLPRLTVSIEADRPGVWFPGPLGPYLTWFPAICLRRDFKRAKIPGNPMKSPFGFGVFLGVKLKKIYF*
Ga0105054_107497031	3300007520	Freshwater	MLYLPRLAVLVRTETDRPGAWFPGPLGLYLTLFPAIWLSRDFKHAKVPRNPMETPFCFGVFW
Ga0105054_108348061	3300007520	Freshwater	VDRNLALYLPRLTVLVSIEADRPGAWFPGPLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVK
Ga0105054_108701602	3300007520	Freshwater	MLYLPQLTVLVTIEADRPGAGFSGSLGPYLTWFPAICLSRDFKRAKVPGNPMKTPFCFGVFWGVIFKKNYFRK*
Ga0105054_111303461	3300007520	Freshwater	MPVVQVDRNLMLYLPRLTVFVTIVADRPGAWFPGPVGPYLTWFTAICLIRDFKRAKVPGNPMKSLFCFGVLWGFIFKKKYLRE*
Ga0105053_103924501	3300007522	Freshwater	VLYLPRLTVLVTIVADRPGAWFRGPLGPYLTWFPAIRLSRDLKRAEVPGNPMKSPFCFGVFLGV
Ga0105053_106135962	3300007522	Freshwater	MFFCQPLFELQVDRNLMLYLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKK
Ga0105053_108444372	3300007522	Freshwater	LMLYMPRLTVLVSIEADRPGAWFPGPLGPYQAWFHAISLSREFKRAKVPVNPMKTPFCFSVFLRVKFKKKIIFAS*
Ga0105053_109891541	3300007522	Freshwater	LPRLTVLVSIEADRPGAWFPGPLGPYQAWFSVICLGREFKRAKILENPMKSPFGFSDFWGVKFKRK*
Ga0105053_110260681	3300007522	Freshwater	MLHLPRQNVLVTIVADRPEAWFPGPLGPFLILFSAICLNRDFKRAKVPGNLMKSPFCFGVFWGGH
Ga0105053_110800991	3300007522	Freshwater	MLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKHAKVPGNPMETPFCFGVFWGVIFEKN
Ga0105053_111743122	3300007522	Freshwater	MLYLPRLAVLVTIAADRTGAWFPGTLGPYHAWFPGIDLSRDFKRAKVPGNPMKSPFCFGVFWGAIFKKIYFRKKTAESRITLAEWPV*
Ga0105053_111801851	3300007522	Freshwater	VDRNLAGYLPRLAVLVSIAADQAEAWFPGPLGPYQAWFPGIDLSWDFKRAKVPGNPMKSPFCFGVFWGV
Ga0105051_110902841	3300007722	Freshwater	VQVDRNLMLYLPRLAVLVSIETDRPEARFPGPLGPYQAWFCAIYLSRDFDLVKVPGNPMKSPFGFGVFLGVK*
Ga0136586_11613051	3300012272	Saline Lake	LDDLARIEADRPGPWFPGPLGPYLTRFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT*
Ga0136586_11679531	3300012272	Saline Lake	FGGRHVLQVDRNLMLYLPRLAVLVTIVADRPGAWFPGPLGPYQAWFPGICLSRDNKHVKVPGNPMKTPFCFGVFWGVIFEKIYFRK*
Ga0222669_10507641	3300022825	Saline Water	MLYLPRLTLLVSIETDRPGAWFPGPLGPYQAWFPAIWLSRDFKRAKVPVNPMKTPFCFGVFLGVKFKKKTIFAS
Ga0222707_10022694	3300022832	Saline Water	MLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0222707_10270761	3300022832	Saline Water	MHLFQLGFGLGPHLQVDRNLMLYLPRLAVLVSIAADRPGAWFPGPLGPYQAWFPGIDLSRDFKRAKVPGNPMKSPFCFGVFWGVIFKKSFFRK
Ga0222707_10337652	3300022832	Saline Water	VLCLPRLTVLVSTEADRPGAWFPGLFDPYPTFFLGIGLSRDFERVKVPGNPMKSPFCVGVFFVLVSLGVKFLRSLFVRVDSRVT
Ga0222644_10410991	3300022841	Saline Water	RNLVLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0222687_10916312	3300022844	Saline Water	FGVQVDRNLMLYLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0222668_10503551	3300022865	Saline Water	LYIQVDRNLMLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0222629_10365391	3300022867	Saline Water	MLYLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKNLFLTVDSRIT
Ga0222629_10663291	3300022867	Saline Water	QSSAAFYRVDRNLALYLPRLTVLVSIEADRPGAWFPGPLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0222648_10191442	3300023054	Saline Water	LALYLPRLTVLVSIEADRPGAWFPGPLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKNLFLTIDSRIT
Ga0222648_10898482	3300023054	Saline Water	YCLQVDRNLMLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0222690_10185801	3300023227	Saline Water	YLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0222709_10413751	3300023230	Saline Water	LMLYLPRLAVLVRIEADRPGAWFPGLLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0222689_10444951	3300023231	Saline Water	PPLQVDRNLMLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0222630_11053362	3300023243	Saline Water	SFCHYEEGTPSYPGIQVDRNLMLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0222710_10573511	3300023429	Saline Water	VPFYTCAIQVDRNLMLYLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0222686_10565761	3300023501	Saline Water	RANPKPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0208903_11091621	3300025502	Saline Lake	AIQVDRNLMLYLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0208413_10678291	3300025513	Saline Lake	ACLQVDRNLMLYLPRLAVLVTIVADRPGAWFPGPLGPYQAWFPGICLSRDLKHAKVPVNPMKTPFCFGVFWGVIFKKKLFLQVDSRIT
Ga0208413_11202111	3300025513	Saline Lake	MLYLPRLAVLVTIVADRPEAWFPGPLGPYQAWFSGICLSRDFKHAKVPVNPMKTPFC
Ga0208413_11298931	3300025513	Saline Lake	SLAGFLLLQVDRNLMLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFGFGVFWGVIFEKIYFRK
Ga0208413_11334131	3300025513	Saline Lake	RTTSTVPVYRVDRNLALYLPRLTVLVSIEADRPGAWFPGPLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0208413_11752492	3300025513	Saline Lake	MLYLPRLTLLVSIETDRPGAWFPGPLGPYQAWFPAIWLSRDFKRAKVPVNPMKTPFCFGVFLGVKFKKKLFSQVDSRIT
Ga0208413_11801411	3300025513	Saline Lake	VVQVDRNLMLYLPRLAVLFTIVADRPGAWFPGPLGLYLTWFPGILLSRDFKHAKVPVNPMKTPFC
Ga0208768_10508121	3300025601	Saline Lake	MLYLPRLTLLVSIEADRPGAWFPGPLGPYQAWFPAIWLSRDFKRAKVPVNPMKTPFCFGVFLGVKFKKKLFSQVD
Ga0208768_10914791	3300025601	Saline Lake	VDRNLALYLLRLTVLVSIEADRPGAWFPIPLGPYLIWFPAMYLSRDFKRAKMPGNPMKSPFGFGVFLGVKFK
Ga0208768_11041851	3300025601	Saline Lake	MDRNLVLYLPRLIVLVTIVADRPEAWFPGPLGPYLTWFAAICLSRDFKRAKVPGNPMKSPFCFGVFWGVIFKKYYFRK
Ga0208768_11106451	3300025601	Saline Lake	MLHLPRLVVLVTIVADRPGAWFPGPLGSYEAWFPGTCLSRDFKHAKEPVNPMKTPFCFGV
Ga0208768_11123581	3300025601	Saline Lake	MLYLPRLTVLVTIEADRPGAWFPGPLGPYQAWFPAICPSRDFKPAKVPGNPMKTPFCFG
Ga0208768_11406682	3300025601	Saline Lake	MHVWCLKAAKVIPLQVDRNLMLYLPRLTVLVTIVADRPGAWFPGPLGPYLAWFPAICLRRDFKRAKVPGNPMKSPFCFGVFWGGHIQKKIFLRVDSRIA
Ga0208768_11413861	3300025601	Saline Lake	MLYLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0208768_11891972	3300025601	Saline Lake	MLYLPRLTVLVNIVADRPGAWFPGPLGSYIVWFPAICLSRDFKRAKVPGNPMKSPFCFGVFWGIIFIKKYFYK
Ga0208768_11929941	3300025601	Saline Lake	MLYLPRLVVLVTIVADRPGAWFPGLLGPYQAWFPGICFSRDFKHAKVPVNPMKTPFCFGVFWGVIFKKKLFS
Ga0208414_11012971	3300025603	Saline Lake	HLQVDRNLMLYLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0209491_104560831	3300027832	Freshwater	MRVMPLCLQVDRNLMLYLPRLAVLVTIEADRLGAWFPGPFGPYQALFPGICLSRDFKLAEVPVNTKKTPFCFGVFWGVLFKKIYFRE
Ga0209491_106012851	3300027832	Freshwater	ARYFQPKSTKLQVDRNLMLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0209491_106255871	3300027832	Freshwater	HQLEVQHLARSAQLQVDRNLMLYLPRLAVLVRIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0209491_106946861	3300027832	Freshwater	MLYLPQLTVLVTIEADRPGAGFSGSLGPYLTWFPAICLSRDFKRAKVPGNPMKTPFCFGVFWGVIFKKKLFSRVD
Ga0209491_107023851	3300027832	Freshwater	MLLVQVDRNFAGCLPRLAVLVSIAADRPGAWFPGPLGPYRAWFPGIDLSRDFKRAKVPGNPMKSPFCFGVFWGVIFKKIYFRK
Ga0209390_102006891	3300027848	Freshwater	IPVLDYRVDRNLALYLPRLTVLVSIEADRPGAWFPGPLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT
Ga0209390_108150151	3300027848	Freshwater	VLVSIAADRPGAWFPGPLGPYQAWFPGIDLSRDFERAKVPGNPMKSPFCFGVFWGVIFKKKYFRK
Ga0335398_104806121	3300032435	Freshwater	MLNLPRLIVLVTIVADRPGAWFPGPLGPYQARFPGIYLSRDFKGAKAPGNPMKSPFCFGVFLGVEFKKKLFSRVDSRIT
Ga0335398_105085681	3300032435	Freshwater	MYLPRLTVLVTIVADRPGAWFPGPLGPYLTWFPAICLSRDFIRAKVPGNPIKSPFCFGVFWGSYSK
Ga0335398_105232162	3300032435	Freshwater	MLYLLRLAVFVTIEADRPGAWFSGQLDPYQALFPGSCLNRDLKHAKMPVNPMKTAFILASFGGSYSKKYILQLDSRIT
Ga0335398_105962521	3300032435	Freshwater	VDRNLVLYLPRLTVLVFIEAGRPEARFPGSLGPYRTWFPAIYLSRDFDLVKVPGNPMKSPFGFGVFLGVKFKKKYF
Ga0335398_107411011	3300032435	Freshwater	VDRNLMLYLPRLAVLVRIEADRPGAWFPGPLGPYLTWFPAIYLSRDFKLAKVPGNPMETPFCFGVFWGVIFEKIYFRK
Ga0335398_108819851	3300032435	Freshwater	VSGYRVDRNLALYLPRLTVLVSIEADRPGAWFPGSLGPYLTWFPAIYLSRDFDLVKVPENPMESPFGFGVFLGVKFKKKLFLTVDSRIT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102630

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign