Metagenome / Metatranscriptome Family F102578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102578
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	43 residues
Representative Sequence	MSAEETFVAPTRRALKSDDGERQTWNPEYPAADRTPSMPVVRSIV
Number of Associated Samples	80
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.88 %
% of genes near scaffold ends (potentially truncated)	65.35 %
% of genes from short scaffolds (< 2000 bps)	97.03 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (91.089 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.495 % of family members)
Environment Ontology (ENVO)	Unclassified (42.574 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.317 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.33% β-sheet: 0.00% Coil/Unstructured: 87.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF04337	DUF480	0.99
PF13557	Phenol_MetA_deg	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3132	Uncharacterized conserved protein YceH, UPF0502 family	Function unknown [S]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
All Organisms	root	All Organisms	8.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
cellular organisms	root	All Organisms → cellular organisms	8.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.97 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.97 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.97 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.98 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.98 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.99 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.98 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.99 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.99 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → environmental samples	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	91.09 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.98 %
uncultured Verrucomicrobiales bacterium HF0010_05E02	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → environmental samples → uncultured Verrucomicrobiales bacterium HF0010_05E02	0.99 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.99 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.99 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004099\|Ga0058900_1011985	Not Available	529	Open in IMG/M
3300004119\|Ga0058887_1024429	Not Available	566	Open in IMG/M
3300004130\|Ga0058895_1006585	Not Available	527	Open in IMG/M
3300004133\|Ga0058892_1008465	Not Available	524	Open in IMG/M
3300004475\|Ga0068969_1474140	Not Available	518	Open in IMG/M
3300005640\|Ga0075035_1598331	Not Available	521	Open in IMG/M
3300007526\|Ga0075022_1712914	Not Available	566	Open in IMG/M
3300010860\|Ga0126351_1226515	Not Available	567	Open in IMG/M
3300010876\|Ga0126361_10723638	Not Available	567	Open in IMG/M
3300010877\|Ga0126356_10647702	Not Available	567	Open in IMG/M
3300010880\|Ga0126350_11962583	Not Available	526	Open in IMG/M
3300011060\|Ga0138583_1103626	Not Available	528	Open in IMG/M
3300011084\|Ga0138562_1208956	Not Available	568	Open in IMG/M
3300011087\|Ga0138570_1030584	Not Available	536	Open in IMG/M
3300011120\|Ga0150983_11001899	Not Available	525	Open in IMG/M
3300012382\|Ga0134038_1203238	Not Available	540	Open in IMG/M
3300019157\|Ga0184573_108369	Not Available	547	Open in IMG/M
3300019166\|Ga0184595_108586	Not Available	552	Open in IMG/M
3300019166\|Ga0184595_129885	Not Available	567	Open in IMG/M
3300019170\|Ga0184570_100709	Not Available	551	Open in IMG/M
3300019245\|Ga0187791_1372373	Not Available	572	Open in IMG/M
3300019251\|Ga0187795_1071796	Not Available	551	Open in IMG/M
3300019258\|Ga0181504_1527132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	629	Open in IMG/M
3300019275\|Ga0187798_1237278	Not Available	557	Open in IMG/M
3300019275\|Ga0187798_1475112	Not Available	514	Open in IMG/M
3300021181\|Ga0210388_10377020	Not Available	1247	Open in IMG/M
3300021855\|Ga0213854_1098724	Not Available	573	Open in IMG/M
3300021860\|Ga0213851_1449543	Not Available	569	Open in IMG/M
3300022498\|Ga0242644_1041266	Not Available	524	Open in IMG/M
3300022502\|Ga0242646_1018880	Not Available	639	Open in IMG/M
3300022502\|Ga0242646_1034855	Not Available	529	Open in IMG/M
3300022503\|Ga0242650_1020077	Not Available	555	Open in IMG/M
3300022504\|Ga0242642_1082263	Not Available	543	Open in IMG/M
3300022504\|Ga0242642_1085816	Not Available	535	Open in IMG/M
3300022505\|Ga0242647_1003516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1168	Open in IMG/M
3300022505\|Ga0242647_1037643	Not Available	541	Open in IMG/M
3300022506\|Ga0242648_1075025	Not Available	556	Open in IMG/M
3300022507\|Ga0222729_1057261	Not Available	551	Open in IMG/M
3300022508\|Ga0222728_1011059	Not Available	1175	Open in IMG/M
3300022508\|Ga0222728_1098183	Not Available	552	Open in IMG/M
3300022509\|Ga0242649_1062000	Not Available	546	Open in IMG/M
3300022509\|Ga0242649_1080986	Not Available	500	Open in IMG/M
3300022511\|Ga0242651_1038874	Not Available	559	Open in IMG/M
3300022511\|Ga0242651_1041354	Not Available	548	Open in IMG/M
3300022511\|Ga0242651_1053574	Not Available	504	Open in IMG/M
3300022512\|Ga0242676_1033895	Not Available	585	Open in IMG/M
3300022512\|Ga0242676_1055110	Not Available	504	Open in IMG/M
3300022533\|Ga0242662_10307966	Not Available	530	Open in IMG/M
3300022709\|Ga0222756_1037045	Not Available	692	Open in IMG/M
3300022711\|Ga0242674_1057108	Not Available	549	Open in IMG/M
3300022713\|Ga0242677_1075811	Not Available	535	Open in IMG/M
3300022714\|Ga0242671_1093072	Not Available	564	Open in IMG/M
3300022714\|Ga0242671_1099348	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	552	Open in IMG/M
3300022714\|Ga0242671_1119054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	519	Open in IMG/M
3300022715\|Ga0242678_1031102	Not Available	703	Open in IMG/M
3300022715\|Ga0242678_1074496	Not Available	531	Open in IMG/M
3300022717\|Ga0242661_1098030	Not Available	610	Open in IMG/M
3300022717\|Ga0242661_1127699	Not Available	554	Open in IMG/M
3300022717\|Ga0242661_1140903	Not Available	534	Open in IMG/M
3300022717\|Ga0242661_1144311	Not Available	530	Open in IMG/M
3300022718\|Ga0242675_1119425	Not Available	526	Open in IMG/M
3300022722\|Ga0242657_1071437	Not Available	806	Open in IMG/M
3300022722\|Ga0242657_1217240	Not Available	535	Open in IMG/M
3300023533\|Ga0247537_100668	Not Available	901	Open in IMG/M
3300023658\|Ga0184591_103709	Not Available	563	Open in IMG/M
3300023666\|Ga0247531_115757	Not Available	550	Open in IMG/M
3300029701\|Ga0222748_1101717	Not Available	560	Open in IMG/M
3300030539\|Ga0210281_1227004	Not Available	528	Open in IMG/M
3300030545\|Ga0210271_10196027	Not Available	558	Open in IMG/M
3300030545\|Ga0210271_11031582	Not Available	575	Open in IMG/M
3300030578\|Ga0210275_10407787	Not Available	500	Open in IMG/M
3300030593\|Ga0210263_1188867	Not Available	531	Open in IMG/M
3300030627\|Ga0210269_10347969	Not Available	528	Open in IMG/M
3300030761\|Ga0265722_102358	All Organisms → cellular organisms → Bacteria → Proteobacteria	716	Open in IMG/M
3300030762\|Ga0265775_113783	Not Available	532	Open in IMG/M
3300030805\|Ga0265756_113999	Not Available	547	Open in IMG/M
3300030812\|Ga0265734_101209	Not Available	916	Open in IMG/M
3300030849\|Ga0075393_11029247	Not Available	552	Open in IMG/M
3300030850\|Ga0075387_11700624	Not Available	553	Open in IMG/M
3300030854\|Ga0075385_10014504	Not Available	555	Open in IMG/M
3300030863\|Ga0265766_1022454	Not Available	527	Open in IMG/M
3300030873\|Ga0265751_105073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	753	Open in IMG/M
3300030873\|Ga0265751_113551	Not Available	547	Open in IMG/M
3300030874\|Ga0265742_1023135	Not Available	540	Open in IMG/M
3300030881\|Ga0265728_102468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → environmental samples → uncultured Verrucomicrobiales bacterium HF0010_05E02	562	Open in IMG/M
3300030917\|Ga0075382_10070646	Not Available	519	Open in IMG/M
3300030936\|Ga0138306_1642366	Not Available	538	Open in IMG/M
3300030963\|Ga0265768_115726	Not Available	527	Open in IMG/M
3300030971\|Ga0075375_10085363	Not Available	572	Open in IMG/M
3300031231\|Ga0170824_106751875	Not Available	500	Open in IMG/M
3300031231\|Ga0170824_123094102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	817	Open in IMG/M
3300031469\|Ga0170819_15906582	Not Available	560	Open in IMG/M
3300031474\|Ga0170818_114881043	Not Available	637	Open in IMG/M
3300031664\|Ga0310118_120670	Not Available	535	Open in IMG/M
3300031678\|Ga0310114_123030	Not Available	544	Open in IMG/M
3300031708\|Ga0310686_106036852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6285	Open in IMG/M
3300031810\|Ga0316044_127584	Not Available	552	Open in IMG/M
3300031868\|Ga0316038_114681	Not Available	553	Open in IMG/M
3300032515\|Ga0348332_12738290	Not Available	553	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.04%
Aquatic	Environmental → Aquatic	3.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.05%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.15%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.95%
Loam	Environmental → Terrestrial → Soil → Loam	4.95%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.99%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.95%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	3.96%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.96%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.99%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004130	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF226 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004133	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF220 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007526	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaT_CSR_2012 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011084	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011087	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 55 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019157	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019166	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019170	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019251	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022500	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023533	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023658	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023666	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030539	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO151-VCO111SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030593	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE024SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030627	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE095SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030761	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030762	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030805	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030812	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030849	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030850	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030863	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030873	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030874	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030881	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030936	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_OS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030971	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031664	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031678	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031810	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031868	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0058900_10119851	3300004099	Forest Soil	MSAEEAFVAPTRRALKSDGGERRMRIPEYPAADRTPSMPVVRSIVP*
Ga0058887_10244291	3300004119	Forest Soil	MSAEETFVAPTRHTLKSDDGERQTWNPEYPAADRTPSMPVVRSIVP*
Ga0058895_10065851	3300004130	Forest Soil	MSAEEAFVAPTRRALKSDGGERQMRIPEYPAADRTPSMPVVRSIVP*
Ga0058892_10084651	3300004133	Forest Soil	MSAEETFVALTRRALKSDGGERQMWNPEYLAADRTPSMPVVRSIVP*
Ga0068969_14741402	3300004475	Peatlands Soil	MSAEETFVALTRRALKSGDGEWQMWNPAYPAADRTPSMPVVRSIVP*
Ga0075035_15983312	3300005640	Permafrost Soil	MSAEETFVAPTRRTLKSDDGERQMWNPEYPAADRAPSMPVVRSIVP
Ga0075022_17129142	3300007526	Watersheds	MSAEEEFAALTRRALKSDDGERQTRNPEYPAADRTPSMPVVRSIVP*
Ga0126351_12265151	3300010860	Boreal Forest Soil	MSAEETFVAPTRRTLKGDDGERQMWNPEYPAADRAPSMPVVRSIVP*
Ga0126361_107236381	3300010876	Boreal Forest Soil	MSAEETFVALTRRALKSDDGERQMSNPEYPAADRAPSMPVVRSIVP*
Ga0126356_106477021	3300010877	Boreal Forest Soil	MSAEETFVAPTRRTLKSDDGERQMWNPEYLAADRTPSMPVVRSIVP*
Ga0126350_119625831	3300010880	Boreal Forest Soil	MSAEETFVAPTRRTLKSDDGERQMWNPEYLTADRAPSMPVVRSIVP*
Ga0138583_11036261	3300011060	Peatlands Soil	MSAEETFAALTRRALKSDDGERRMWNPEYPAADRTPS
Ga0138562_12089561	3300011084	Peatlands Soil	MSAEETFAALTRRALKSDDGERRMWNPEYPAADRTPSMPVFRSIVP*
Ga0138570_10305841	3300011087	Peatlands Soil	MSAEETFVAPTRRALKSDDGERQMWNPEYPPADRAPSMPV
Ga0150983_110018991	3300011120	Forest Soil	MSVEETFVAPTRRTLKSDDGERQMWNPEYPAADRTPSMPVVRSIVP
Ga0134038_12032381	3300012382	Grasslands Soil	MCLLHHLAALKSAGNEWQTRDPVHRAADRTPSMPVVRSIV
Ga0184573_1083691	3300019157	Soil	VATTRRTLKSVAGEWQTPNPDRPSADRTPSMPVVRSI
Ga0184595_1085861	3300019166	Soil	MFIRRGPFAAPTRRMLKGSVGEWQARNPDRPAADRTPSMPAVRSI
Ga0184595_1298852	3300019166	Soil	MAVEETFAAPTRRALKSGDGEWQMWNPDYPAADRTPSMPVVRSIVP
Ga0184570_1007091	3300019170	Soil	MSAEETFVALTRRALKSVDGERQMWNPEYSAADRTPSMPVVRSIVP
Ga0187791_13723731	3300019245	Peatland	MTAEGLLKAPTRRALKSNAGEPTAANPEHPAAERTPCMPVVRSIVP
Ga0187795_10717961	3300019251	Peatland	MFIREGPLTAPTRRKLKSGVGERKMANQDRLAADRTPSMQVVRSIVP
Ga0181504_15271321	3300019258	Peatland	APTRRALKSADGEWQTRNPEYPAADRTPSMPVVRSIVP
Ga0187798_12372781	3300019275	Peatland	MAALTRRALKSADGEWLARNPEHTAAERMPSMPVVRSIVP
Ga0187798_14751121	3300019275	Peatland	MRSVEGSLTALTRRALKSSAGERQATNREHLAADRTPSMPVVRSIVP
Ga0210388_103770202	3300021181	Soil	MSAEETFVALTRRALKSDDGERRMWNPEYPAADRAPSMPVVRSIVP
Ga0213854_10987241	3300021855	Watersheds	MSAEETFVALTRRALKSDDGERQMWNPEYLAADRTPSMPVVRSIVP
Ga0213851_14495432	3300021860	Watersheds	MSAEEEFAALTRRALKSDDGERQTRNPEYPAADRTPSMPVVRSIVP
Ga0242644_10412661	3300022498	Soil	MSAEETFVALTRRALKSDDGERQMWNPEYPAADRAPS
Ga0242643_1228281	3300022500	Soil	MSAEETFVAPTRRTLKSDDGERQTWNPEYPTADRA
Ga0242646_10188801	3300022502	Soil	MKTGFSAPTRRALKSVVGEREATYHEHPAADRTPSMPVVRSIVP
Ga0242646_10348551	3300022502	Soil	MSAEETFVALTRRALKSDDGERRMWNPEYPAADRAPSMP
Ga0242646_10382971	3300022502	Soil	MSAEEMFVTPTRCMLKSGGGEWRIWNPEYPTADRA
Ga0242650_10200771	3300022503	Soil	MSAEETFVAPTRRALKSNDGERQMWNPEYPAADRTPGMTVVRSIVP
Ga0242642_10822631	3300022504	Soil	MSAEETFVALTRRALKSDDGERQMWNPEYPAADRAPSMPVVRS
Ga0242642_10858161	3300022504	Soil	MSAEETFVAPTRRALKSDGGERQMRIPEYPAADRTPSMP
Ga0242647_10035161	3300022505	Soil	MFAALTRRALKGDDGERRMWNPAYPAADRTPSMPVVRSIVP
Ga0242647_10376432	3300022505	Soil	MSAEETFVAPTRRALKSNDGERQMWNPEYPAADRTPGMTVVRSIV
Ga0242648_10750251	3300022506	Soil	MSAEEAFVALTRRALKSDVGGRRMWNPECPAADRTPSMPVVRSIVPRTP
Ga0222729_10572611	3300022507	Soil	MSAEEAFVAPTRRALKSDGGERQMRIPEYPAADRTPSMPVVRSIVP
Ga0222728_10110591	3300022508	Soil	MSAEEAFVAPTRRALKSDGGERQMRIPEYPAADRTPSMPVVHSIVP
Ga0222728_10981831	3300022508	Soil	MKTGFSAPTRRALTSVVGEREATYHDRPAADRTPSMPVVRSIV
Ga0242649_10620001	3300022509	Soil	MSAEEAFVALTRCALKSDGGERQMWNPEYPAADRAPSMPVVRSIVP
Ga0242649_10809861	3300022509	Soil	TRRALKSDDGERQMWNPEYPAADRAPSMPVVRSIVP
Ga0242651_10388742	3300022511	Soil	ATTRRALKSAGGERQARDPERPSADRTLSMPVVRSIVP
Ga0242651_10413541	3300022511	Soil	MVREETFVAPTRRTLKSGDGERQMWNPEYLPADRTPSMPVVRSI
Ga0242651_10535741	3300022511	Soil	MSAEETFVAPTRRALKSNDGERQMWNPEYPAADRTP
Ga0242676_10338951	3300022512	Soil	VFPALIRRALKSVGGERDVWNRLNPVADQTPSMPVVRSIVPGALDRTGS
Ga0242676_10551101	3300022512	Soil	MSAEEMFVTPTRCMLKSGGGEWRIWNPEYPTADRAPSMPVVRSIV
Ga0242662_103079661	3300022533	Soil	MSVEDAFVAVTRLRLKSGDGERQMVYPEHPVAKRT
Ga0222756_10370451	3300022709	Soil	KSAEETFAAPTRRVLERDDGERQVWNPEYPAADRTPSMPVVRSIVP
Ga0242674_10571081	3300022711	Soil	MSAEETFVAPTRRALKSDDGERQTWNPEYPAADRTPSMPVVRSIV
Ga0242677_10758111	3300022713	Soil	MSAEETFSAPTRRTLKSDDGERQMWNPEYPAADRTPSMP
Ga0242671_10930721	3300022714	Soil	MYDEETFVALTRRALKSEDGERQMWNPEYPAADRAPSMPVVRSIVP
Ga0242671_10993482	3300022714	Soil	VALTRRALKSDVGERQMWNPEYPAADRTPSMPVVRSIVP
Ga0242671_11190542	3300022714	Soil	FVALTRRALKSDVGERQMWNPEYPAADRTPSMPVVRSIVP
Ga0242678_10311022	3300022715	Soil	MSAEETFVAPTRRALKSDDGERQTWNPEYPAPDRTPRTPAVRSKGFEKK
Ga0242678_10744961	3300022715	Soil	MSADETFVAPTRRALKSDDGGRQTWNPEYPAADRAPSM
Ga0242661_10980301	3300022717	Soil	MSAEEAFVALTRCALKSDGGERQMWNPEYPAADRAPSM
Ga0242661_11276991	3300022717	Soil	MSAEETFVARTRRALKSDDGERQMWNPEYPAADRAPSMPVVRSIVP
Ga0242661_11409032	3300022717	Soil	YMSAEETFVALTRRALKSDDGERQMWNPEYPAADRAPSMPVVHSIVP
Ga0242661_11443111	3300022717	Soil	MSAEETFSAPTRRALKSDDGERQMWNPEYPAADRAPSMP
Ga0242675_11194251	3300022718	Soil	MSAEETFVALTRRRLKSGDGEQRVWNPEYPAADRAP
Ga0242657_10714371	3300022722	Soil	VLVAPTRCALKSGGGERQTPNPEYPAADRTPSMPVVRSIVVDLVMVAK
Ga0242657_12172402	3300022722	Soil	MSAEETFAAPTRRTLKSDDGERQMWNPEYPAADRTPSMPAVRSIVP
Ga0247537_1006683	3300023533	Soil	MSAEETFVAPTRRALKSVDGERQMWNPEYSAADRTPSMPVVRSIVP
Ga0184591_1037091	3300023658	Soil	MSAEETFVALTRRALKSDDGERQMWNPEYPVADRAPSMPVVRSIVP
Ga0247531_1157571	3300023666	Soil	VATTRRTLKSVAGEWQTPNPDRPSADRTPSMPVVRSIV
Ga0222748_11017171	3300029701	Soil	MSAEETFAAPTRRTLKSDDGERQTWNPEYPTADRAPSMPVVRSIVP
Ga0210281_12270041	3300030539	Soil	VATTRRTLKSVAGEWQTPNPDRPSADRTPSMPVVR
Ga0210271_101960271	3300030545	Soil	MSAEETFAALTRRALKSVDGERQTWNPAYLAADRTPSMPVPKKKQKDKIIISQSK
Ga0210271_110315821	3300030545	Soil	VFVALTRRALKSADGERQTRIREHPSADRTPSMPVVRSIVP
Ga0210275_104077871	3300030578	Soil	MSAEETFAALTRRALKSDDGERRMWNPEYPAADRAP
Ga0210263_11888671	3300030593	Soil	MSAEETFVAPTRRALKSDDGERQTWNPEYPAADRAPSMPVVR
Ga0210269_103479691	3300030627	Soil	VATTRRTLKTVAVEWQTPNPDRPSADRTPSMPVVR
Ga0265722_1023581	3300030761	Soil	MSAEETFVALTRRRLKGGDGEQQMWNPEYPAADRTPSMPAVRSIVP
Ga0265775_1137831	3300030762	Soil	MSAEETFVALTRRRLKSGDGEQRVWNPEYPAADRAPSM
Ga0265756_1139991	3300030805	Soil	MSAEEAFVALTRRALKSDDGERQMWNPEYPAADRAPSMPVVRSIVP
Ga0265734_1012091	3300030812	Soil	MSAEETFVALTRRRLKSGDGEQRVWNPEYPAADRAPSMPVVRSIVP
Ga0075393_110292471	3300030849	Soil	MSAEETFVALTRRALKSDDGERQMWNPEYPTADRAPSMPVVRSIVP
Ga0075387_117006241	3300030850	Soil	MSAEETFVAPTRRALKSDDGERRMWNPEYPAADRTPSMPVVRSIV
Ga0075385_100145041	3300030854	Soil	MSAEETFAALTRRSLKSGDGERRMWNPEYPAADRTPSMPVVRSIVP
Ga0265766_10224541	3300030863	Soil	MSAEETFAGLTRRALICEDGERRMWNPEYPAADGTE
Ga0265751_1050732	3300030873	Soil	MSAEETFVAPTRRALKSDDGERQMWNPEYPPADRAPSMPAVRSIVP
Ga0265751_1135511	3300030873	Soil	MSAEETFVALTRRRLKSGDGERQMWNPEYPAADRTPSMPAVRS
Ga0265742_10231351	3300030874	Soil	MSAEETFVAPTRRTLKSDVGERQMWNPAYPAADRAPSMP
Ga0265728_1024681	3300030881	Soil	YMSAEETFVALTRRRLKSGDGERQMWNPEYPAADRTPS
Ga0075382_100706461	3300030917	Soil	MSVEEAFAAPTRRALKSDDGERRMWNPEYPAADRAPSMP
Ga0138306_16423661	3300030936	Soil	MSAEETFVALTRRRLKSGDGEQRVWNPEYPAADRAPSMPVVRSI
Ga0265768_1157261	3300030963	Soil	MSAEETFAALTRRALKSDDGERRMWNPEYPAADRTP
Ga0075375_100853631	3300030971	Soil	MSAEETFVALTRRALKGDDGERQMWNPEYLAADRTPSMPVVRSIVP
Ga0170824_1067518751	3300031231	Forest Soil	MSAEETFAALTRRMLKSGDGERQMWNPEYPAADRTPSMPVVRSKKKEN
Ga0170824_1230941022	3300031231	Forest Soil	MSAEEAFAAPTRGELKSSDGERQMWNPEYPAADRAPSLPAVRSIVP
Ga0170819_159065821	3300031469	Forest Soil	MSAEEAFVALTRRALKSDGGERQMWNPEYLAADRTPSMPVVRSIVP
Ga0170818_1148810431	3300031474	Forest Soil	MSVEETFVALTRRALKSDDGERQMWNPEYPTADRAPSMPVVRSIVP
Ga0310118_1206701	3300031664	Soil	MSAEETFVALTRRRLKSGDGEQRVWNPEYPAADRAPSMP
Ga0310114_1230301	3300031678	Soil	VATTRRTLKSVAGEWQTPNPDRPSADRTPSMPVVRSIVPLTLD
Ga0310686_1060368521	3300031708	Soil	APVGCKSAEGAFVATTRRTLKSVAGEWQTPNPDRPSADRTPSMPVVRSIVP
Ga0316044_1275841	3300031810	Soil	VATTRRTLKSVAGEWQTPNPDRPSADRTPSMPVVRSIVP
Ga0316038_1146811	3300031868	Soil	MSAEETFVAQTRRALKSDDGERQMWNPEYPAADRAPSMPVVRSIV
Ga0348332_127382901	3300032515	Plant Litter	MSAEETFVAPTRRALKSGDGERQVWNPEYPAADRTPSMTVVRSIV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102578

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences