Metagenome / Metatranscriptome Family F102443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102443
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	78 residues
Representative Sequence	MVPGLTDIYRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYSL
Number of Associated Samples	86
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.07 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.733 % of family members)
Environment Ontology (ENVO)	Unclassified (35.644 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.356 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.00% β-sheet: 0.00% Coil/Unstructured: 55.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00361	Proton_antipo_M	50.50
PF01059	Oxidored_q5_N	9.90
PF00662	Proton_antipo_N	0.99
PF04134	DCC1-like	0.99
PF00384	Molybdopterin	0.99
PF00499	Oxidored_q3	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	1.98
COG0839	NADH:ubiquinone oxidoreductase subunit 6 (chain J)	Energy production and conversion [C]	0.99
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.51 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	36.63 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.93 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.93 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	36.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.93 %
Unclassified	root	N/A	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10087993	Not Available	1598	Open in IMG/M
3300004082\|Ga0062384_100211456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1151	Open in IMG/M
3300004092\|Ga0062389_104660182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300004152\|Ga0062386_101067345	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005332\|Ga0066388_100567326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1762	Open in IMG/M
3300005332\|Ga0066388_101708735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300005332\|Ga0066388_106081207	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300005332\|Ga0066388_108826771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005764\|Ga0066903_104370065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	755	Open in IMG/M
3300009038\|Ga0099829_10404630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300009631\|Ga0116115_1052163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1086	Open in IMG/M
3300010048\|Ga0126373_11329911	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300010048\|Ga0126373_11645196	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300010048\|Ga0126373_12182626	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300010048\|Ga0126373_12360564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300010339\|Ga0074046_10726777	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010360\|Ga0126372_12917352	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300010361\|Ga0126378_10831697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300010379\|Ga0136449_100527384	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300012971\|Ga0126369_13417073	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300014152\|Ga0181533_1347655	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300015052\|Ga0137411_1072745	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300015054\|Ga0137420_1208772	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300016294\|Ga0182041_12234188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300016319\|Ga0182033_10336164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1258	Open in IMG/M
3300016341\|Ga0182035_11487842	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300016404\|Ga0182037_11476670	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300016422\|Ga0182039_10115705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2012	Open in IMG/M
3300016750\|Ga0181505_10072080	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300016750\|Ga0181505_10237559	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300017933\|Ga0187801_10469567	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300017955\|Ga0187817_10054107	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2478	Open in IMG/M
3300017961\|Ga0187778_10049293	All Organisms → cellular organisms → Bacteria → Acidobacteria	2573	Open in IMG/M
3300017972\|Ga0187781_10000923	All Organisms → cellular organisms → Bacteria → Acidobacteria	21788	Open in IMG/M
3300017972\|Ga0187781_10444666	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300017995\|Ga0187816_10473162	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300018006\|Ga0187804_10325941	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300018007\|Ga0187805_10389885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300018040\|Ga0187862_10697809	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300018085\|Ga0187772_10307693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M
3300018086\|Ga0187769_11312160	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300018088\|Ga0187771_11106372	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300018088\|Ga0187771_11542601	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300018090\|Ga0187770_11679307	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300020579\|Ga0210407_10322112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300020580\|Ga0210403_10123340	All Organisms → cellular organisms → Bacteria → Acidobacteria	2109	Open in IMG/M
3300020580\|Ga0210403_11008742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300021168\|Ga0210406_10651471	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300021403\|Ga0210397_10106338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1903	Open in IMG/M
3300021403\|Ga0210397_10668567	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300021406\|Ga0210386_11140109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300021407\|Ga0210383_10619566	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300021432\|Ga0210384_10911679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300021474\|Ga0210390_11012692	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300021477\|Ga0210398_10398049	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300021478\|Ga0210402_10570204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300021559\|Ga0210409_10404462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300021559\|Ga0210409_10738613	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300021560\|Ga0126371_11026362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300022533\|Ga0242662_10031480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279	Open in IMG/M
3300024288\|Ga0179589_10029215	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300024288\|Ga0179589_10361696	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300024330\|Ga0137417_1331630	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300025480\|Ga0208688_1012753	All Organisms → cellular organisms → Bacteria → Acidobacteria	2359	Open in IMG/M
3300025910\|Ga0207684_11190808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300025928\|Ga0207700_10574730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300026377\|Ga0257171_1073220	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300026514\|Ga0257168_1052054	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300026551\|Ga0209648_10284420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300026959\|Ga0207852_1009372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300027003\|Ga0207722_1021098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300027035\|Ga0207776_1015275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300027703\|Ga0207862_1191939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300027825\|Ga0209039_10093791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1295	Open in IMG/M
3300027857\|Ga0209166_10697227	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300027889\|Ga0209380_10391625	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300028906\|Ga0308309_10733931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300030844\|Ga0075377_11173944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300031170\|Ga0307498_10077728	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300031545\|Ga0318541_10404211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300031640\|Ga0318555_10333842	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300031708\|Ga0310686_117931893	All Organisms → cellular organisms → Bacteria → Acidobacteria	3381	Open in IMG/M
3300031744\|Ga0306918_11204846	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031770\|Ga0318521_10621573	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031796\|Ga0318576_10168782	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300031797\|Ga0318550_10353422	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300031820\|Ga0307473_10189645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300031890\|Ga0306925_11147975	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031947\|Ga0310909_10390235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300031954\|Ga0306926_10883662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1071	Open in IMG/M
3300032001\|Ga0306922_10995731	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300032035\|Ga0310911_10008849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4514	Open in IMG/M
3300032059\|Ga0318533_10250409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1279	Open in IMG/M
3300032076\|Ga0306924_11403020	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300032160\|Ga0311301_10233777	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3068	Open in IMG/M
3300032180\|Ga0307471_100267735	Not Available	1774	Open in IMG/M
3300032180\|Ga0307471_101630882	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300032180\|Ga0307471_103099848	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300033289\|Ga0310914_11136019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300033402\|Ga0326728_10040298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7318	Open in IMG/M
3300033561\|Ga0371490_1125113	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.15%
Aquatic	Environmental → Aquatic	14.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.17%
Freshwater	Environmental → Aquatic → Freshwater	14.85%
Peat	Environmental → Terrestrial → Peat	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.85%
Loam	Environmental → Terrestrial → Soil → Loam	12.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.95%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025480	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100879932	3300001356	Peatlands Soil	MTPPGAQDILRVLPELTWCGAGVLLMLLQPFVKNRQALTFISMLGAAAGTMVTFNLAFGEGFGGLVQFDIF
Ga0062384_1002114561	3300004082	Bog Forest Soil	MVPKIDDILRVLPELVWCGFGVLLMLAQPFVKSRQALTFIAMLGAANGTLATFFCVPGSGFFGLVQFDTYSLFFHWL
Ga0062389_1046601822	3300004092	Bog Forest Soil	MVPKIDDILRVLPELTWCGFGVLLMLAQPFIKSRQVLTFIAMLGAAAGTLVTFFCVPGSGFFGLVQFDTYSLFFHWLVGLVAFLVFLASDSYLQRENLEGAEYY
Ga0062386_1010673452	3300004152	Bog Forest Soil	MTPPGAQDILRVLPELAWCGAGVLLMLLQPFVKSRQALTFISMLGAAAGTLVTFKAAFGEGFGGLVQFDIFSLFFHWLIGL
Ga0066388_1005673261	3300005332	Tropical Forest Soil	MVPHAADIARVLPEIIWCAFGVFLMLLQPFLKNRQVLTLFAMVGAALGTLSTYFGQMGAGFFGLIQFDTCGLFFHWLVGLVAFLVI
Ga0066388_1017087352	3300005332	Tropical Forest Soil	MIPIPGIADINRVLPELVWCCFGVILMLLQPFVRFRQALTFIAMIGAALGTLATFFGTYGSGFVGLIQFDTF
Ga0066388_1060812072	3300005332	Tropical Forest Soil	MVPGLTDISRVLPELTWCVFGVILMLLQPFLKSRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYS
Ga0066388_1088267712	3300005332	Tropical Forest Soil	MIPRTPDILGVLPELIWCGFGVFLMLLQPFLKSRQALTFFAMLGASLGTLSTFFAGSGIGFGGLVMFDTYSLFFHWLVGLVSFLVILSADSYLQR
Ga0066903_1043700652	3300005764	Tropical Forest Soil	MVPQVPQTADIIRVLPEISWCGFGVLLMLLQPFLKNRQALTLFAMFGAAVGTLSTFYGHIGPGFFGLIQFDTYSLFF
Ga0099829_104046302	3300009038	Vadose Zone Soil	MTPSAADLIRVLPEIIWCGFGVLLMLLQPFLKNRQGLTLFAMVGAAAGTLATYFGQMGSGFFGLIQFDTYS
Ga0116115_10521632	3300009631	Peatland	LTPPGAQDILRVLPELAWCGAGVLLMLLQPFVKNRQALTFISMLGASAGTLVTFKAAFGEGFGGLVQFDIFSLFFHWLIGLVAFL
Ga0126373_113299111	3300010048	Tropical Forest Soil	MPLQIPQTPDLVRVLPEIIWCAFGVFLMLLQPFLKNRQMLTLFAMIGAALGTLSTFFGQMGAGFSGLIQFDMLSLF
Ga0126373_116451961	3300010048	Tropical Forest Soil	MQSLNQVMLQNVFHVLPELVWCIFGVILMLLQPFVKGRQALTYIAMVGAAAGTLVTFSTAMGPGFSGLIQFDTFSLFFHWLVGLVAFLVI
Ga0126373_121826261	3300010048	Tropical Forest Soil	MVPGLTDISRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQF
Ga0126373_123605642	3300010048	Tropical Forest Soil	MVAQIPQSADIVRVLPEIIWCAFGAFLMLLEPFLKNRRQLLTLFGMIGASLGTLSTFYGHTGPGFFGLIQFDILSLFFPW
Ga0074046_107267771	3300010339	Bog Forest Soil	MTPPGAQDILRVLPELAWCGAGVLLMLLQPFVKNRQALTFISMLGAAAGTLVTFRAAFGEGFGGLVQFDIFSLFFHWLIGLV
Ga0126372_129173522	3300010360	Tropical Forest Soil	MNPSPASLIDIHRVLPELCWCAFGVVLMLLQPFLKNRQGLTFVALVGAAAGTLTTSVAAYGSGFKGLVQ
Ga0126378_108316971	3300010361	Tropical Forest Soil	MIWCGFGVLLMLLQPFLKNRQVLTLFAMFGAAVGTLSTFFGQMGSAFFGLIQFDPLSLFFHWMLGLVAFLVILAADSYLGRENLEPAEFFALI
Ga0136449_1005273841	3300010379	Peatlands Soil	MTPPGAQDILRVLPELAWCGAGVLLMLLQPFVKSRQALTFISMLGAAAGTLVTFKAAFGEGFGGLVQFDI
Ga0126369_134170731	3300012971	Tropical Forest Soil	MVPGLTDIYRVLPELVWCASGVLLMLLQPFLKNRQMLTFLAMVGAAIGTLSTFIGIPGSGFSGLIQFDTFSLFFH
Ga0181533_13476551	3300014152	Bog	MTPPGTQDILRVLPEVAWCGAGVLLMLLQPFVKNRQALTFIAMLGAAAGTLVTFKAAFGEAFGG
Ga0137411_10727452	3300015052	Vadose Zone Soil	MTPSAADLIRVLPEIIWCGFGVLLMLLQPYLKNRQGLTLFAMVGAAAGTLATYFGQMG
Ga0137420_12087721	3300015054	Vadose Zone Soil	MTPSAADLIRVLPEIIWCGFGVLLMLLQPYLKNRQGLTLFAMVGAAVGTLATYFGQMGSGFFGLIQFDTYSVQSLFPLARWL
Ga0182041_122341882	3300016294	Soil	MIPNPPGLIDVYRVLPELCWCAFGVVLMLLQPFLKNRQGLTFVGLIGAAAGTLTTSIAAYGSGFNGLVQFDTFSMFFHWLVGL
Ga0182033_103361642	3300016319	Soil	MVPGLTDIYRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYSLFFHWLVGLITFLVFLSSDSYLAREN
Ga0182035_114878422	3300016341	Soil	MVPQVPQTADIIRVLPEISWCGFGVLLMLLQPFLKNRQGLTLFAMLGAAVGTLSTFYGHLGPGFFGL
Ga0182037_114766702	3300016404	Soil	MVPGLTDISRVLPELTWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFD
Ga0182039_101157052	3300016422	Soil	MDSLNQIMLRNVFHVLPELLWCGFGVILMLLQPFTKSRQVLTFVALVGAAAGTLVTFFTFVGSGFSCLIQFDTLSLFFHWLVG
Ga0181505_100720801	3300016750	Peatland	MTPPGTQDILRVLPEIAWCGAGVLLMLLQPFVKHRQTLTLIGMLGAAAGTLVTFKAAFGEGFGGLVQFDIFSLF
Ga0181505_102375591	3300016750	Peatland	MNSLNQVMVGNLLHVLPEIVWCGFGVILMLLQPFVKSRQTLTFVAMLGAAFGTLISFFGLAGSGFSGLIECDTFSLFFHWLIGLVTFLVILSSD
Ga0187801_104695672	3300017933	Freshwater Sediment	MSLNEQMLRDILRVLPELLWCGFGVLLMLAQPFVKARKALTFIAMVGAALGTLSTFFGIFGSGFGGLIQFDTFSIFL
Ga0187817_100541073	3300017955	Freshwater Sediment	MESLNQVMLQNVFHVLPELMWCAFGVILMLLQPFVKGRQALTYIAMVGAAAGTLVTFSTSMGPGFSGLIQFDTFSLFFHWLVGLVAFLVI
Ga0187778_100492933	3300017961	Tropical Peatland	MTPPGTQDVLRVLPELAWCGAGVLLMLLQPFVKSRQALTFISMVGAAAGTLVTFKAPFGEGFEGLVQSDVFSLFFHWLIGLV
Ga0187781_1000092324	3300017972	Tropical Peatland	MESLNQIMLRNVFHVLPELVWCGFGVILMLLQPFMKSRQALTFLALLGAAAGTLSTFSTLIGSGFSGLITFDTFSLFFHWLVGLVAFLVIL
Ga0187781_104446662	3300017972	Tropical Peatland	MTPPGGQDILRVLPELAWCGAGVLLMLLQPFVRSRQALTFVSMLGAAAGTLVTFKAAFGEGFGGLVQSD
Ga0187816_104731621	3300017995	Freshwater Sediment	MTPPGAQDLIRVLPELAWCGAAVLLMLLQPFVKSRQVLTFLSMLGAAAGTLVTLRTAFGEAFGGLVQCDVFSLFFHW
Ga0187804_103259412	3300018006	Freshwater Sediment	MSLNEQMLRDILRVLPELLWCGFGVLLMLAQPFVKARKALTFIAMVGAALGTLSTFFGIFGSGFGGLIQFDTFSIFLHWLVGLVTFLVIL
Ga0187805_103898851	3300018007	Freshwater Sediment	MIPGFADLQRVLPELIWCGFGVVLMLVQPFVKSRQALTFIAMAGAAAGTLVTFFGIPGSGFSGLIQFDTFSLFFHWLIGLITF
Ga0187862_106978091	3300018040	Peatland	MTPPGAQDILRVLPELAWCGAGVLLMLLQPFVKNRQALTFISMLGASAGTLVTFKAAFGEGFGGLVQFDIFSLFFHWLIGLVA
Ga0187772_103076931	3300018085	Tropical Peatland	MSLNEQMLRDIPKVLPELIWCAFGVLLMLAQPFVKVRKALTFIAMIGAALGTMATFVLFQGVSGSGFGGLIQFDTFSIFLHWLVGLVSFLVLLASESYLER
Ga0187769_113121601	3300018086	Tropical Peatland	MSLNEQMLRDLPKVLPELVWCGFGVALMLLQPFLKSRKALTFIAMIGAAMGTLATRYGSYGAGFSGLVQRDDF
Ga0187771_111063721	3300018088	Tropical Peatland	MIPGAADLLRVLPELAWCGFGVLLMLVQPFVKNRQALTFMAMIGAAVGTLVTFFGIFGSGFLGLIQF
Ga0187771_115426011	3300018088	Tropical Peatland	MTPPGTQDILRVLPELAWCGAGVLLMLLQPFVKNRQALTFISMLGAAAGTLVTFRAAFGEGFGGLVQFDIFSLFFHWL
Ga0187770_116793072	3300018090	Tropical Peatland	MTPPGAQDIIRVLPELAWCGAGVLLMLLQPFLKNRLALTFIGMLGAAVGTLVTFRSTFGEAFGGLV
Ga0210407_103221122	3300020579	Soil	MTPTAADLIRILPEIIWCGFGVLLMLLQPFLKNRQGLTLFAMVGAAAGTLATYFGHMGSGFFGLIQFDTYSLFFHWLVG
Ga0210403_101233401	3300020580	Soil	MTPSTADLIRVLPEIIWCGFGVLLMLLQPVLKNRQGLTLFAMLGAAAGTLATYFGQMGSGFFGLIQFDTYS
Ga0210403_110087421	3300020580	Soil	MIPRTQDILGVLPELIWCGFGVLLMLLQPFLKNRQALTFFAMLGASLGTLSTFFAGSGIGFGGLVMFDTYSLFFHWLVGLVSFLVI
Ga0210406_106514711	3300021168	Soil	MNPPQMADILRVLPELAWCGFGVILMLLQPFVKFRQAITFIAMIGAALGTLLTFFRIPGPGFSGLIQSDVYSL
Ga0210397_101063382	3300021403	Soil	MIPRTQDILGVLPELIWCGFGVLLMLLQPFLKNRQALTFFAMFGAALGTLSTFFAGSGIGFGGLVMFDTYSLFFHWLVGLVSFLVILSADSYLQR
Ga0210397_106685672	3300021403	Soil	MNPPQMADILRVLPELAWCGFGVILMLLQPFVKFRQAITFIAMIGAALGTLLTFFRIPGPGFSGLIQSDVYSLFFHWL
Ga0210386_111401092	3300021406	Soil	MIPRTQDILGVLPELIWCGFGVLLMLLQPFLKNRQALTFFAMFGAALGTLSTFFAGSGIGFGGLVMFDTYSLFFHWLVGLVSFL
Ga0210383_106195661	3300021407	Soil	MIPRTPDILGVLPELIWCGFGVFLMLLQPFLKNRQALTFFAMLGASLGTLSTFFAGSGIGFGGLVMFDTYS
Ga0210384_109116792	3300021432	Soil	MNPPQMADILRVLPELAWCGFGVILMLLQPFVKFRQAITFIAMIGAALGTLLTFFRIPGPGFSGLIQSDVYSLFFHWLVGLVAFLVIL
Ga0210390_110126921	3300021474	Soil	MTPTTADMFRILPELIWCGFGVLLMLLEPFLKNRQGLTLLAMLGAATGTLATYFGQMGSGFFGLIQFDTYSLFFH
Ga0210398_103980492	3300021477	Soil	MTPTTADMFRILPELIWCGFGVLLMLLEPFLKNRQGLTLLAMLGAATGTLATYFGQMGSGFFGLIQFDTYSLFFHWLVGLVAFLVILASDS
Ga0210402_105702041	3300021478	Soil	MVPKIDDILRVLPELVWCGFGVLLMLVQPFIKSRQALTFIAMLGAAAGTLATFFGVPGSGFFGLVQ
Ga0210409_104044621	3300021559	Soil	MVPKIDDILRVLPELVWCGFGVLLMLVQPFVKSRQALTFIAMMGAAIGTLVTFFCVPGSGFFGLV
Ga0210409_107386131	3300021559	Soil	MTPSAADLIRVLPEIIWCGFGVLLMLLQPFLKNRQGLTLFAMVGAAGGTLATYFGQMGNGFFGLIQFD
Ga0126371_110263621	3300021560	Tropical Forest Soil	MIPIPGIADINRVLPELVWCGFGVILMLLQPFVRFRQALTFIAMIGAALGTLATFFGTYGSGFVGLIQFDTFSIFLHWLVGLVAFLVI
Ga0242662_100314801	3300022533	Soil	MTPSAADLIRILPETIWCGFGVLLMLLQPFLKNRQGLTLFAMVGAAGGTLATYFGQMGSGFF
Ga0179589_100292153	3300024288	Vadose Zone Soil	MTPSAADLIRILPEIIWCGFGVLLMLLQPFLKNRQGLTLFAMVGAAAGTLATYFGQMGSGFFGLVQFDTYS
Ga0179589_103616961	3300024288	Vadose Zone Soil	MTPSAADLIRVLPEIIWCGFGVLLMLLQPYLKNRQGLTLFAMVGAAAGTLATYFGQMGTGFFGLIQ
Ga0137417_13316302	3300024330	Vadose Zone Soil	MTPSAADLIRVLPEIIWCGFGVLLMLLQPYLKNRQGLTLFAMVGAAAGTLGTYFGQMGTGFFGLIQFDTYSLFF
Ga0208688_10127533	3300025480	Peatland	MTPPGTQDILRVLPELAWCSAGVLLMLLQPFVKNRQALTFISMLGAAAGTLVTFKAAFGEGFGGLVQFDIFSLFFHWLIG
Ga0207684_111908081	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIPRTQDILGVLPELIWCGFGVLLMLLQPFLKNRQALTFFAMLGAALGTLSTFFAGSGIGFGGLVMFDTYSLFFHWLVGLVSFLVILSAD
Ga0207700_105747301	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MIPRTQDILGVLPELIWCGFGVLLMLLQPFLKNRQALTFFAMLGAALGTLSTFFAGSGIGFGGLVMFDTYSLFFHWLVGLVSFL
Ga0257171_10732202	3300026377	Soil	MTPSAADLIRVLPEIIWCGFGVLLMLLQPLLKNRQGLTLFAMVGAAAGTLATYFGKMGSGFFGLIQFDTYSLFFHWLVG
Ga0257168_10520541	3300026514	Soil	MTPSTADLIRVLPEIIWCGFGMLLMLLQPFLKNRQGLTLFAMVGAAAGTLSTYFGQMGSGFFGLI
Ga0209648_102844201	3300026551	Grasslands Soil	MTPSAADLIRVLPEIIWCGFGVLLMLLQPYLKNRQGLTLFAMVGAAAGTLATYFGQMGS
Ga0207852_10093722	3300026959	Tropical Forest Soil	MIPQLGDILRVLPELIWCAFGVLLMMLQPFLKNRQGLTLLAMVGIALGTLSTFFGVPGAGFGGLIQFDLFSLFFHWLVGLVA
Ga0207722_10210982	3300027003	Tropical Forest Soil	MVPGLTDIYRVLPELVWCASGVVLMLLQPFLKNRQMLTFLAMVGAAIGTLSTFIGIPGSGFSGLIQFDTFSLFFHWLVGLITFLVI
Ga0207776_10152751	3300027035	Tropical Forest Soil	MVPGLTDIYRVLPELVWCASGVVLMLLQPFLKNRQMLTFLAMVGAAIGTLSTFIGIPGSGFSGLIQFDTFSLFFHWLVGLITFLV
Ga0207862_11919392	3300027703	Tropical Forest Soil	MIPQLGDILRVLPELIWCAFGVLLMMLQPFLKNRQGLTLLAMVGIALGTLSTFFGVPGAGFGGLIQFDLFSLFFHWLVGLVAF
Ga0209039_100937911	3300027825	Bog Forest Soil	MTPPGAQDILRVLPELAWCGAGVLLMLLQPFVKNRQALTFISMLGAAAGTLVTFKSAFGEGF
Ga0209166_106972272	3300027857	Surface Soil	MTPSTADLIRVLPEIIWCGFGVLLMLLQPYLKNRQGLTLFAMVGAAGGTLATYFGQMGSGFFGLIQFDT
Ga0209380_103916252	3300027889	Soil	MESLNQVMLRNVFHVLPELLWCGFGVMLMLLQPFVKSRQVLTFLALVGAAAGTLVTFFTFVGSAFSGLIQFDTFSLFFHWLVGLVA
Ga0308309_107339312	3300028906	Soil	MNPPQMADILRVLPELAWCGFGVILMLLQPFVKFRQAITFIAMIGAALGTLLTFFRIPGPGFSGLIQSDVYSLFFHWLVGLVAFLVI
Ga0075377_111739441	3300030844	Soil	MIPRTPDILGVLPELIWCGFGVFLMLLQPFLKNRQALTFFAMLGASLGTLSTFFAGSGIGFGGLVMFDTYSLFFHWLVGLVSFLVILSADSYLQ
Ga0307498_100777281	3300031170	Soil	MIPRTQDILGVLPELIWCGFGVLLMLLQPFLKNRQALTFFAMLGTSLGTLSTFFAGSGIGFGGLVMFDT
Ga0318541_104042111	3300031545	Soil	MVPGLTDIYRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYSLFFHWLVGLIT
Ga0318555_103338422	3300031640	Soil	MVPGLTDIYRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYSL
Ga0310686_1179318931	3300031708	Soil	MNSLNQEMLRNLLHVLPEMVWCGFGVLLMLLQPFVKNRQALTFIAMVGAAAGTVVGYFGMPGSGFSGLIQFDTFSLFLHCL
Ga0306918_112048462	3300031744	Soil	MVPGLTDISRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYSVFFHWLVGL
Ga0318521_106215731	3300031770	Soil	MVPGLTDISRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTY
Ga0318576_101687822	3300031796	Soil	MVPGLTDISRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYSLFFHWLVGLITFLVILSSDSYLARENL
Ga0318550_103534221	3300031797	Soil	MNSPVTTPDLLRVLPEFAWCGVGVLLMLLQPFVKNRQALTFIAMLGASVGTLATFFGPAGSAFSGLVQF
Ga0307473_101896452	3300031820	Hardwood Forest Soil	MIPRTPDILGVLPELIWCGFGVFLMLLQPFLKNRQALTFFAMLGASLGTLSTFFAGSGIGFGGLVMFDTYSLFFHWLVGLVSFLVI
Ga0306925_111479752	3300031890	Soil	MIPNPPGLIDVYRVLPELCWCAFGVVLMLLQPFLKNRQGLTFVGLIGAAAGTLTTSIAAYGSGFNGLVQFDTFSMFFHWLVG
Ga0310909_103902352	3300031947	Soil	MVPQVPQTADIIRVLPEISWCGFGVLLMLLQPFLKNRQGLTLFAMLGAAVGTLSTFYGHLGPGFFG
Ga0306926_108836622	3300031954	Soil	MIPIPGIADINRVLPELVWCCFGVILMLLQPFVKLRQALTFIAMIGAALGTLATFFGTYGSGFVGLIQFDTFS
Ga0306922_109957312	3300032001	Soil	MVPGLTDISRVLPELTWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYSLFFHWLVGLI
Ga0310911_100088491	3300032035	Soil	MVPGLTDIYRVLPELIWCAFGVILMLLQPFLKNRQMLTFLAMVGAAIGTLSTFFGVPGSGFFGLIQFDTYSLFFHWLVGLITFLVILSSDSYLARENLA
Ga0318533_102504092	3300032059	Soil	MVPQVPQTADIIRVLPEISWCGFGVLLMLLQPFLKNRQGLTLFAMLGAAVGTLSTFYGHLGPGFFGLIQFDTYSLFFHWLIGLVGFL
Ga0306924_114030202	3300032076	Soil	MIPRTADILGVLPELIWCGFGVFLMLVQPFLKNRQALTFFAMLGAAGGTLSTFFAGNGIGFGGLVMFDTYSLFFHWLVGL
Ga0311301_102337773	3300032160	Peatlands Soil	MTPPGAQDILRVLPELAWCGAGVLLMLLQPFVKSRQALTFISMLGAAAGTLVTFKAAFGEGFGGLVQFDIFSLFFH
Ga0307471_1002677351	3300032180	Hardwood Forest Soil	MSQFNIELLRNLLRVMPELVWCGFGVLLMLLQPFLKNRQALTFLAMAGAAIGTLSTFFGIPGSGFSGLIQCDTYSLFFHWLVGLIAFLVIL
Ga0307471_1016308822	3300032180	Hardwood Forest Soil	MIRILPEIIWCGFGVLLMLLQPFLKNRQGLTLFAMVGAAGGTLATYFGKMGSGFFGLI
Ga0307471_1030998482	3300032180	Hardwood Forest Soil	MIPRTQDILGVLPELIWCGFGVLLMLLQPFLKNRQALTFFAMLGASLGTLSTFFAGSGIGFGGRVMFDTYSLF
Ga0310914_111360192	3300033289	Soil	MIPNPPGLIDVYRVLPELCWCAFGVVLMLLQPFLKNRQGLTFVGLIGAAAGTLTTSIAAYGSGFDGLVQFDTFSMFFHWLVGLIAFLVILA
Ga0326728_100402981	3300033402	Peat Soil	MTPPGAQDILRVLPELAWCGAGVLLMLLQPFVKNRQALTFIAMLGAAAGTLVTFKAAFGEAFGGLVQFDIFSLFFHWLI
Ga0371490_11251132	3300033561	Peat Soil	MTPPGAQDILRVLQELAWCGAGVLLMLLQPFVKNRQALTFIAMLGAAAGTLVTFKAAFGEGFGGLVQCDIFSLFFHWLIGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102443

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences