Metagenome / Metatranscriptome Family F102442

Basic Information
Family ID	F102442
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	76 residues
Representative Sequence	MSSDHSTTQPAGAGAGTFSAADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLMQTVMQLVNHAAES
Number of Associated Samples	84
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.02 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	93.07 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Bacteria (78.218 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.545 % of family members)
Environment Ontology (ENVO)	Unclassified (44.554 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.574 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.46% β-sheet: 0.00% Coil/Unstructured: 49.54%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00871	Acetate_kinase	76.24
PF13561	adh_short_C2	4.95
PF05494	MlaC	3.96
PF13742	tRNA_anti_2	1.98
PF07505	DUF5131	0.99
PF13565	HTH_32	0.99
PF01255	Prenyltransf	0.99
PF00484	Pro_CA	0.99
PF00710	Asparaginase	0.99
PF00300	His_Phos_1	0.99
PF16576	HlyD_D23	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0282	Acetate kinase	Energy production and conversion [C]	76.24
COG3426	Butyrate kinase	Energy production and conversion [C]	76.24
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	3.96
COG0252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	Translation, ribosomal structure and biogenesis [J]	1.98
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.99
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.99
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.22 %
Unclassified	root	N/A	21.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.22 %
Unclassified	root	N/A	21.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.22 %
Unclassified	root	N/A	21.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.39 %
Unclassified	root	N/A	21.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	8.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.91 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.91 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.91 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	0.99 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10027920	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300004080\|Ga0062385_11167151	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300004082\|Ga0062384_100989111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300004091\|Ga0062387_100151658	All Organisms → cellular organisms → Bacteria → Proteobacteria	1336	Open in IMG/M
3300004092\|Ga0062389_100580330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1282	Open in IMG/M
3300005171\|Ga0066677_10198251	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300005363\|Ga0008090_15396919	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300009038\|Ga0099829_10520562	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300009088\|Ga0099830_11709216	All Organisms → cellular organisms → Bacteria → Proteobacteria	525	Open in IMG/M
3300010048\|Ga0126373_11326953	Not Available	785	Open in IMG/M
3300010343\|Ga0074044_10974448	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300010361\|Ga0126378_11837265	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300010361\|Ga0126378_12578476	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300010361\|Ga0126378_13183298	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300010362\|Ga0126377_13093509	Not Available	537	Open in IMG/M
3300010376\|Ga0126381_102050826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300010376\|Ga0126381_102395218	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300010376\|Ga0126381_103022543	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300010379\|Ga0136449_103316176	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300010401\|Ga0134121_10664194	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300012285\|Ga0137370_10793652	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300012362\|Ga0137361_10222927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1711	Open in IMG/M
3300012363\|Ga0137390_11235883	All Organisms → cellular organisms → Bacteria → Proteobacteria	694	Open in IMG/M
3300012363\|Ga0137390_11641575	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300012923\|Ga0137359_11184242	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300012927\|Ga0137416_10203465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1590	Open in IMG/M
3300012927\|Ga0137416_11679954	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300014497\|Ga0182008_10686165	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300015200\|Ga0173480_11135155	Not Available	524	Open in IMG/M
3300015373\|Ga0132257_100925683	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300016294\|Ga0182041_10666256	Not Available	920	Open in IMG/M
3300016357\|Ga0182032_11871576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300016371\|Ga0182034_10280267	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300016404\|Ga0182037_10324486	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300017970\|Ga0187783_10592710	Not Available	802	Open in IMG/M
3300021088\|Ga0210404_10448984	Not Available	725	Open in IMG/M
3300021358\|Ga0213873_10303459	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300021377\|Ga0213874_10193915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300021404\|Ga0210389_11085025	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300021439\|Ga0213879_10060778	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300021474\|Ga0210390_11506947	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300021475\|Ga0210392_11491850	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300021476\|Ga0187846_10082387	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300021476\|Ga0187846_10158151	Not Available	958	Open in IMG/M
3300021476\|Ga0187846_10473320	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300021479\|Ga0210410_10078844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2892	Open in IMG/M
3300021479\|Ga0210410_10779295	Not Available	841	Open in IMG/M
3300021560\|Ga0126371_10264272	All Organisms → cellular organisms → Bacteria → Proteobacteria	1839	Open in IMG/M
3300022533\|Ga0242662_10239628	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300022718\|Ga0242675_1066105	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300022726\|Ga0242654_10032604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	1372	Open in IMG/M
3300025915\|Ga0207693_10231196	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300025916\|Ga0207663_10207592	Not Available	1417	Open in IMG/M
3300025939\|Ga0207665_10131808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1775	Open in IMG/M
3300027090\|Ga0208604_1017394	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300027825\|Ga0209039_10000403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	42124	Open in IMG/M
3300028536\|Ga0137415_11147468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300028906\|Ga0308309_10095562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2285	Open in IMG/M
3300029636\|Ga0222749_10578802	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300031469\|Ga0170819_17573668	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300031544\|Ga0318534_10706460	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300031546\|Ga0318538_10262972	Not Available	927	Open in IMG/M
3300031561\|Ga0318528_10079751	All Organisms → cellular organisms → Bacteria → Proteobacteria	1696	Open in IMG/M
3300031561\|Ga0318528_10183407	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300031573\|Ga0310915_10735140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M
3300031668\|Ga0318542_10410048	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300031680\|Ga0318574_10499058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300031681\|Ga0318572_10699275	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300031719\|Ga0306917_10628509	Not Available	844	Open in IMG/M
3300031736\|Ga0318501_10516737	All Organisms → cellular organisms → Bacteria → Proteobacteria	652	Open in IMG/M
3300031747\|Ga0318502_10210168	Not Available	1127	Open in IMG/M
3300031770\|Ga0318521_10356243	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300031770\|Ga0318521_10715376	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300031770\|Ga0318521_10997244	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300031770\|Ga0318521_11036682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300031771\|Ga0318546_10249796	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300031778\|Ga0318498_10196321	Not Available	916	Open in IMG/M
3300031779\|Ga0318566_10422316	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300031819\|Ga0318568_10316775	Not Available	969	Open in IMG/M
3300031835\|Ga0318517_10517667	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300031879\|Ga0306919_11074888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300031893\|Ga0318536_10188021	Not Available	1052	Open in IMG/M
3300031942\|Ga0310916_10621986	Not Available	917	Open in IMG/M
3300031946\|Ga0310910_11118059	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300031947\|Ga0310909_10201176	All Organisms → cellular organisms → Bacteria → Proteobacteria	1656	Open in IMG/M
3300031947\|Ga0310909_10839899	Not Available	757	Open in IMG/M
3300031954\|Ga0306926_10878265	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300032044\|Ga0318558_10286241	Not Available	814	Open in IMG/M
3300032054\|Ga0318570_10107176	Not Available	1224	Open in IMG/M
3300032063\|Ga0318504_10095205	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300032064\|Ga0318510_10104151	Not Available	1083	Open in IMG/M
3300032066\|Ga0318514_10676010	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300032076\|Ga0306924_10921318	Not Available	965	Open in IMG/M
3300032090\|Ga0318518_10031777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2420	Open in IMG/M
3300032091\|Ga0318577_10020322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2752	Open in IMG/M
3300032261\|Ga0306920_102405209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300033289\|Ga0310914_10131983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2185	Open in IMG/M
3300033289\|Ga0310914_10214237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1723	Open in IMG/M
3300033289\|Ga0310914_10806004	Not Available	837	Open in IMG/M
3300033290\|Ga0318519_10542112	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300033290\|Ga0318519_10566600	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.04%
Host-Associated	Host-Associated	3.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.10%
Aquatic	Environmental → Aquatic	5.94%
Plants	Host-Associated → Plants	3.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.13%
Freshwater	Environmental → Aquatic → Freshwater	5.94%
Cave	Environmental → Terrestrial → Cave	2.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.94%
Loam	Environmental → Terrestrial → Soil → Loam	5.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.97%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.97%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.99%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100279201	3300003218	Bog Forest Soil	MSSDRSTTQTAATGTGTFSAADLKRRMAEREAAKAAEELHRMREHEEKQKAVMEEFHKPPDRTPEQLMQTIMQLVNHAAEG
Ga0062385_111671512	3300004080	Bog Forest Soil	MSENRSATPAVGTGIFSAADLKRRMAELEMAKAAEELRRMQAQEEQQKAVMAEFHKPPERTAGQ
Ga0062384_1009891112	3300004082	Bog Forest Soil	MSENRSTAQPTSAGVYSAADIKHRIAEREAAKAAEDLRHVKDQEEKQKAVMEELHKPFDRSADQLMQVVMQLVSHAADRGQSE
Ga0062387_1001516581	3300004091	Bog Forest Soil	MSSDHSTTQTAGTGSGTFSAADIKRRMAEREAAKAAEELRRMREHEAKQKAVMEEFHKPPERTPEQL
Ga0062389_1005803302	3300004092	Bog Forest Soil	MSENRSTMPPAGAGSLSAADLRRRMAEREAAKAAEELRHMQEQEEKQKAVMAEFYKPPERTAEQLLELVMQLVNRAAERGQSEVQVY
Ga0066677_101982511	3300005171	Soil	MSESRTTTKPAEAGMFSAADIKRRMTEREVQKAAEELRHMKEQEEKQKAVMAEFHQPAARSPEQLTQALMQL
Ga0008090_153969191	3300005363	Tropical Rainforest Soil	MSSDRSATQAPGTGAGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQLVSHAA
Ga0099829_105205621	3300009038	Vadose Zone Soil	MSEDRSTPHSAGPVAFSAADLRRRMAEREAAKAAEELRHMQEQEEKQKAVIEEFHKPPARTPDQL
Ga0099830_117092162	3300009088	Vadose Zone Soil	MSSDRGTTQIAGTGAGTFSAADLKRRMAERAAARAAEELQHMREQEEKQKAVMEEFHKPPARTPEE
Ga0126373_113269531	3300010048	Tropical Forest Soil	MSSDRSATQTAGTGTGTFSAADLKRRMAEREAAKAAEELRRMREHEEKQKQVMAEFHKPPERTPEQLMQVVMQLVNHAAENGQT
Ga0074044_109744482	3300010343	Bog Forest Soil	MSSDRSTTQTAGTGTGTFSAADLKHRMAEREAAKAAEELARMREHEEKQKAVMEEFHKPPDRTPEQLMQTVMQLVNHAAE
Ga0126378_118372652	3300010361	Tropical Forest Soil	MSSDHSTTPNFSAADIKRRMTEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVMQLVDHAAEA
Ga0126378_125784762	3300010361	Tropical Forest Soil	MAGIFSADDIKRRMAEREAQKAAEELRRMKEQEEKQKAVMAEFHAPPARTPEQLVPLVMQLVNQ
Ga0126378_131832981	3300010361	Tropical Forest Soil	MSSDHSTTQPAGTGTGAFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQVM
Ga0126377_130935091	3300010362	Tropical Forest Soil	MSESRGTAKPATAGIFSAADIKRRMAEREAQKAAEELRRMKEQEEKQKAVMAEFHAPPTRTPEQLLQTIMQLVN
Ga0126381_1020508261	3300010376	Tropical Forest Soil	MSSDQRGPMPAAAGAFSAADVKRRMAEREAAKAAEELRHMKEQEEHQKAVMAEFHKPPERTPEQLLQLVTQLVRQAAERGQTEVQV
Ga0126381_1023952181	3300010376	Tropical Forest Soil	MSDSRGTAKPAAAGLFSAADIKRQMAEREAQKAAEELRHMKEQEEKQKAVMAEFHAPPARTPEQLMQLLMQLVNHAAERGQT*
Ga0126381_1030225431	3300010376	Tropical Forest Soil	MSSDHSTTPNFSAADIKRRMTEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQVLHFVMQLVD
Ga0136449_1033161762	3300010379	Peatlands Soil	MSDNRGTPQPVGTGIFTVADLKRRMTEREAAKAAEEVRRMQVQEEQQKAVMGEFQKPPERTAE
Ga0134121_106641941	3300010401	Terrestrial Soil	MSENRGTTTSGTGGFSATDLRRRMAEREAAKAAEELRHMKEQEEKQKAVMAEFHKPPERTPEQLMQVIMQLVDKAAER
Ga0137370_107936522	3300012285	Vadose Zone Soil	MSSDRGTTQIAGTGAGTFSAADLKRRMAERAAARAAEELRHMREQEEKQKAMMEEFHKPPARTPEQLMQLIMRLVPQAAESGQNEIQI
Ga0137361_102229273	3300012362	Vadose Zone Soil	MSENRGTAQPAGAGVFSVADLKRRMAEREAAKAAEEVRHMQEQEEKQKAVMAEFHKPPERTADQLMQLVMGLV
Ga0137390_112358832	3300012363	Vadose Zone Soil	MSSEDRSTPQTVGTGAGTFSAADLKRRMAERQTAKAAEELQHMREQEEKQKAVIEEFHKPPARTPDQLMQLVMTLVDRAAESG
Ga0137390_116415752	3300012363	Vadose Zone Soil	MSSDHGNTPTAGTGVGTFSAADLKRRMAERAAARAAEELQHMREQEEKQKAVMEEFHKPPARTPEELMQLIMRLVTQAAE
Ga0137359_111842421	3300012923	Vadose Zone Soil	MSSDRGTTQIAGTEAGTFSAVDLKRRMAERAAARAVEELQHMREQEEKQKAVIEEFHKPPARTPEQLMQLIMRLVTQA
Ga0137416_102034651	3300012927	Vadose Zone Soil	MAENRSTTQPTGAGVFSVADLRRRMAEREAAEAAKEVRHMQEQKEKEKAVMGEFHKPPERSADQLMQLVMGLVNTATERGQSE
Ga0137416_116799542	3300012927	Vadose Zone Soil	MPGRWWAADFGRMEGEVMSSDRGTTQTAGTGAGTFSTADLKRRMAERQAAKAAEELQRMREHEEKQKAVMAEFHKPPERTPEQLMQLVTTLVNHAAE
Ga0182008_106861651	3300014497	Rhizosphere	MSESRSPTKPAGASVFSATDIKRRMAEREAAKAAEELRHMKEQEEKQKAVMAEFHQPPARTPEQLMQLLMQLVTRAAER
Ga0173480_111351552	3300015200	Soil	MSENRSPTQPTGPAVFSAADIKHRMAEREAAKAAEEMRHMKEQEEKLKAVMEEFHKPPERTPDQLMQVVMQLVTHAA
Ga0132257_1009256831	3300015373	Arabidopsis Rhizosphere	MSESRSPTKPAGASVFSATDIKRRMAEREAAKAAEELRHMKEQEEKQKAVMAEFHQPPARTPEQL
Ga0182041_106662561	3300016294	Soil	MSESRDTTPPAGAGSFSATDLRRRMAEREAAKAAEELRHMQEQEEKQKAVMAEFYKPPERTVEQVLQLVM
Ga0182032_118715762	3300016357	Soil	MSSEQRSTKPATAGTFSAADLKRRMAEREAAKAAEELSRMKEQEERQKAVMAEFHKPPDRTAEQLLQSVMQLVNQAADRGQTEVQVY
Ga0182034_102802672	3300016371	Soil	MSDNRSPAQPPGAGTLSADGIKRRMAEREAAKAAEEARHMSEQEEHQKAVMEEFHRPPDRTPDQLMQLITTLVDRAADQGQTEV
Ga0182037_103244862	3300016404	Soil	MSSDHSTTQPAGAGAGTFSAADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLMQTVMQLVNHAAES
Ga0187783_105927102	3300017970	Tropical Peatland	MSDNRSPAQPGAGAFSAADIKRRMAEREAAKAAQELQHMREQEEHQKKIMEEFHAPPDRTPEQLMTLMTTLVDRAADQGQ
Ga0210404_104489842	3300021088	Soil	MSENRSTTPPAGAGKFSAADLRRRMAEREAAKAAEEMRHMKEQEDKQKAVMEEFPKPPARTPEQLMEL
Ga0213873_103034592	3300021358	Rhizosphere	MSENRSPTQPVAGAFSAEAIKRRMAEREAAKAAEQAAHMREQEQKQKAVMAEFLKPPERTPDQLMHFVTQLVDHAAEMGQTEVQ
Ga0213874_101939151	3300021377	Plant Roots	MSENHSAAPTESGVFSAADIRHRMAEREAARAAEELRHSKDKEEKQKAVMEEFHKPFDRSSEQLMKVVMQLVSHAAEGGQ
Ga0210389_110850252	3300021404	Soil	MSSDRGTTQTTATGSGTFSAADLKRRMAERAAARAAEELQHMREQEEKQKAVIEEFHKPPARTPEQLMQLIMRLVTQ
Ga0213879_100607782	3300021439	Bulk Soil	MSENRGAAQPAGAGTFSAADLRRRMAEREAAKTAEELRHVKEQEEKQKAVMAEFHKPPDRTTEQLMQLVTQLVNQAAERGQSEVQ
Ga0210390_115069471	3300021474	Soil	MSDSRSTAKPAAAGAFSAADIKRRMAEREAQKAAEELRRMKEQEEKQKAVMAESHAPPTRTPEQLMQLIMQLVN
Ga0210392_114918502	3300021475	Soil	MSSDRGTTQTTATGSGTFSAADLKRRMAERAAARAAEELQHMREQEEKQKAVIEEFHKPPARTPEQL
Ga0187846_100823872	3300021476	Biofilm	MSSEDRSPAQTPGIFSAADIKRRMAEREAARAAEELRRMREQEDRQKKVMEEFHAPPARTPDQLMQLVMTLVSHAAEAGQTEV
Ga0187846_101581511	3300021476	Biofilm	MSSDRTTTPTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQVLHFVTQLVD
Ga0187846_104733202	3300021476	Biofilm	MSSDRSTTQTPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKSVMAEFHKPPERTPEQLLHFVQ
Ga0210410_100788444	3300021479	Soil	MSESHSTTSGNFSAADLRRRMTEREAAKAAEEVRHMKEQEDKQKAVMEEFHKPPDRTPDQLMQMLMQLVDRAAERGQS
Ga0210410_107792952	3300021479	Soil	MSETRNTGQPAGAGIFSAADLKRRMAEGEAARVAEELRRLQAQEEQQKAVMAEFQQPPGRTAEQLLPLVMRLVSQAA
Ga0126371_102642721	3300021560	Tropical Forest Soil	MSDSHGTAKPAAAGMFSAADIKRRMAEREAQKAAEELRRMKEQEEKQKAVMAEFHAPPTRTPEQLLQTIMQLV
Ga0242662_102396281	3300022533	Soil	MSSDRGSTQTTGTGSGTFSAADLKRRMAERAAARAAEELQHMREQEEKQKAVIEEFHKPPARTPEQL
Ga0242675_10661051	3300022718	Soil	MSETRNTGQPAGAGIFSAADLKRRMAEGEAARVAEELRRLQAQEEQQKAVMAEFQQPPGRTAEQLLPLVMRLVSQAADRGQSEVQ
Ga0242654_100326043	3300022726	Soil	MSSDRGTTQTAGTFSAADLKRRMAEREAAKAAEELQRMREHEEKQKAVMAEFHKPPERTPEQLMQLVTTLVNHAAEAGQTEVQAYRFP
Ga0207693_102311961	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSENRNFSAADLRRRMAEREAAKAAEEMRHMKEQEEKQKAVMDEFRKPPDRTPDQLMQMLMQLVDRAAERG
Ga0207663_102075923	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MSDSRSTPQSAGAGNFSVADLRRRMAEREAAKAAEELRHMQEQQEKQKAVMAEFHKPPERTAEQLMQLVMQLV
Ga0207665_101318083	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAENRSTTEPTGAGIFSVADLKRRMAERAAAEAAKEAHHMQEQKEKQKAVMAEFHKPPERSPDQLMQIVMGLVSHAAERGQSEVQVY
Ga0208604_10173941	3300027090	Forest Soil	MSETRNPIPPAGTGKFSAADLRRRMAEREAAKAAEEMRHLKEQEDKQKAVMEEFHKPPARTPDQLMELVTQL
Ga0209039_100004031	3300027825	Bog Forest Soil	MSSDRSTTQTAATGTGTFSAADLKRRMAEREAAKAAEELHRMREHEEKQKAVMEEFHKPPDRTPEQLMQTIMQLVNHAAEGG
Ga0137415_111474681	3300028536	Vadose Zone Soil	MAENRSTTQPTGAGIFSVADLKRRMAEREAARTAEEVRHMQEQKEKQKAVMAEFHKPPERTAEQLMQSVMGLVSQAAERGQSEIQV
Ga0308309_100955621	3300028906	Soil	MSDSRGTAKPAAAGTFSAADIKRRMAEREAQKAAEELRRMKEQEEKQKAVMAEFHTPPTRTPEQLM
Ga0222749_105788021	3300029636	Soil	MSENRSAPPPVGGGGFSAADLRRRMAEREAAKAAEEMRHMKEQEDKQKAVMEEFRKPPARTPDQLMELVMQLVS
Ga0170819_175736681	3300031469	Forest Soil	YRQYGGRVMSSDRDTTQTAGTGTFSAADLRRRMAEREAAKAAEELQHMREQDEKQKAVMAEFHKPPDRTPEQVMQLVTTLV
Ga0318534_107064602	3300031544	Soil	MSESRGTAKPAAAGIFSAADVKRRMAEREAQKAAEELRHMQEQAEKQKAVMAEFHAPPARTPEQLMQAIMQ
Ga0318538_102629722	3300031546	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLMQVV
Ga0318528_100797511	3300031561	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPDRTPEQLMQVVMRLVDHAAEAGQTEVQVYR
Ga0318528_101834072	3300031561	Soil	MSSDRSTTQTFSAADIKRRMAERESAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQLVSHAAEAGQTEVQ
Ga0310915_107351402	3300031573	Soil	MSENRGSPQPAGVGVFSTADIKRRMAEREAAKAAEELRHMKEQEEKQKAVIDEFHKPLERTPESRWQVE
Ga0318542_104100482	3300031668	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQ
Ga0318574_104990582	3300031680	Soil	MSENRGSMQPARVGVFSTADIKRRMAEREAAKAAEELRHMKEQEEKQKAVIDEFHKPLERTPESRWQVETKGIQR
Ga0318572_106992751	3300031681	Soil	MSSDRTTTPTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLMHFVMQLVDHAAEAGQTEVQVY
Ga0306917_106285092	3300031719	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLMQVVMRLV
Ga0318501_105167371	3300031736	Soil	MSSDRSTTPTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLMHFVMQLVDHAAEAG
Ga0318502_102101682	3300031747	Soil	MSSDRSTTQTPGTGAGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQLVSHAAEAGQTEVQV
Ga0318521_103562431	3300031770	Soil	MSSDRSTTQTFSAADIKRRMAERESAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQL
Ga0318521_107153762	3300031770	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQL
Ga0318521_109972441	3300031770	Soil	MSESRGTAKPAAAGIFSAADVKRRMAEREAQKAAEELRHMQEQAEKQKAVMAEFHAPPARTPEQLMQAIMQLVNHAAERGQT
Ga0318521_110366821	3300031770	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRRMREHEEKQKAVMEEFHKPPDRTPEQLMPTIMQLVNHAAEAGQTEVQVY
Ga0318546_102497961	3300031771	Soil	MSESRGTAKPAAAGIFSAADVKRRMAEREAQKAAEELRHMQEQAEKQKAVMAEFHAPPARTPEQLMQAIM
Ga0318498_101963211	3300031778	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPDRTPEQLMQVVMRLVDHAAEAGQ
Ga0318566_104223162	3300031779	Soil	MSSDRSTTQTFSAADIKRRMAERESAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQ
Ga0318568_103167751	3300031819	Soil	MSSDRSTTQTAGTGTGTFSAADLKRRMAEREAAKAAEELRRMREHEEKQKAVMEEFHKPPDRTPEQLMPTIMQLVNHAAEAGQTEVQ
Ga0318517_105176671	3300031835	Soil	MSSDRSTTQAPGTGTGTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLH
Ga0306919_110748881	3300031879	Soil	MSSDQRGPMPAAASAFSAADVKRRMAEREAAKAAEELRHMKEQEEHQKVVMAEFHKPPERTPEQLLQLVTQLVSQAAE
Ga0318536_101880212	3300031893	Soil	MSESRGTAKPAAAGIFSAADVKRRMAEREAQKAAEELRHMQEQAEKQKAVMAEFHAPPARTPEQLMQAIMQLVNHAAERGQTEVQV
Ga0310916_106219862	3300031942	Soil	MSSDHSATPTAGTGTGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPER
Ga0310910_111180591	3300031946	Soil	MSSDHSTTPAAGTGTGTFSATDIKRRMAERESAKAAEELRRMREQEEKQKAVMAEFHKPPERT
Ga0310909_102011761	3300031947	Soil	MSSDRTTQTAGAGTGAFSAADLKRRMAEREAAKAAEELRRTREQEEKQKAVMAEFLKPPERTPDQLMHFVTQLVNHAAEAG
Ga0310909_108398992	3300031947	Soil	MSSDHSATPTAGTGTGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQVLHFV
Ga0306926_108782652	3300031954	Soil	MSSDRTTTPTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLMHFVMQLVDH
Ga0318558_102862411	3300032044	Soil	MSSDRSTTQTPGTGAGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQLVSHAAEAGQTEVQVY
Ga0318570_101071761	3300032054	Soil	MSSDRSTTQAAGTGTGTFSAADLKRRMAEREAAKAAEELRRMREHEEQQKAVMAEFHKPPERTPEQVLQ
Ga0318504_100952052	3300032063	Soil	MSESRDTTPPAGAGSFSATDLRRRMAEREAAKAAEELRHMQEQEEKQKAVMAEFYKPPERTVEQV
Ga0318510_101041511	3300032064	Soil	MSSDHSTTQPAGVGAGTFSVADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPDRTPEQLMQVVMRLVDHAAEAGQTEVQ
Ga0318514_106760101	3300032066	Soil	MSSDRSTTQTPGTGAGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQLVSH
Ga0306924_109213181	3300032076	Soil	MSDNRSPAQPPGAGVLSADGIKRRMAEREAAKAAEEARHMREQEEHQKAVMEEFHRPPDRTPDQLMQLITTLV
Ga0318518_100317771	3300032090	Soil	MSSDRSTTQTPGTGAGPFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFV
Ga0318577_100203224	3300032091	Soil	MSESRGTAKPAAAGIFSAADVKRRMAEREAQKAAEELRHMQEQAEKQKAVMAEFHAPPARTPEQLMQAIMQLV
Ga0306920_1024052091	3300032261	Soil	MSSDRSTTQTPGTGTGTFSAADIKHRMAEREAAKAAEELRRMREQEDKQKAVMAEFHKPPERTPEQLLHFVQQLVSHAAEAG
Ga0310914_101319831	3300033289	Soil	MSETRKPGTFSAADLRRRMAEREAAKAAEEVRHAKEQEDKQKAVMEEFHKPPARTPDQLMELVMQLVGRAAE
Ga0310914_102142373	3300033289	Soil	MSSDHSTTQPAGAGAGTFSAADLKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPDRTPE
Ga0310914_108060041	3300033289	Soil	MSSDRSTTQTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQLVNHAAEAGQSEVQV
Ga0318519_105421122	3300033290	Soil	MSSDRTTTPTFSAADIKRRMAEREAAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLMHFVMQLVDHAAEAGQTEVQVYR
Ga0318519_105666001	3300033290	Soil	MSSDRSTTQTFSAADIKRRMAERESAKAAEELRRMREQEEKQKAVMAEFHKPPERTPEQLLHFVQQLVSHAAEAGQTEVQVYR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102442

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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