Metagenome Family F102436

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Overview

Basic Information
Family ID	F102436
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	99 residues
Representative Sequence	MRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Number of Associated Samples	33
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	36.00 %
% of genes near scaffold ends (potentially truncated)	33.66 %
% of genes from short scaffolds (< 2000 bps)	78.22 %
Associated GOLD sequencing projects	29
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (89.109 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (67.327 % of family members)
Environment Ontology (ENVO)	Unclassified (85.149 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (71.287 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.51% β-sheet: 13.39% Coil/Unstructured: 81.10%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.11 %
All Organisms	root	All Organisms	10.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.11 %
Viruses	superkingdom	All Organisms → Viruses	10.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	10.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004096\|Ga0066177_10119381	Not Available	1026	Open in IMG/M
3300004096\|Ga0066177_10168385	Not Available	884	Open in IMG/M
3300004128\|Ga0066180_10089753	Not Available	1117	Open in IMG/M
3300004773\|Ga0007795_10035155	Not Available	1611	Open in IMG/M
3300005517\|Ga0070374_10185805	All Organisms → Viruses → Predicted Viral	1073	Open in IMG/M
3300009068\|Ga0114973_10079996	Not Available	1878	Open in IMG/M
3300009068\|Ga0114973_10103499	Not Available	1616	Open in IMG/M
3300009068\|Ga0114973_10354337	Not Available	774	Open in IMG/M
3300009154\|Ga0114963_10734476	Not Available	509	Open in IMG/M
3300009187\|Ga0114972_10040952	Not Available	3222	Open in IMG/M
3300009187\|Ga0114972_10097619	All Organisms → Viruses → Predicted Viral	1933	Open in IMG/M
3300010885\|Ga0133913_10221580	Not Available	5033	Open in IMG/M
3300010885\|Ga0133913_10737144	Not Available	2574	Open in IMG/M
3300010885\|Ga0133913_10750232	Not Available	2549	Open in IMG/M
3300010885\|Ga0133913_10759618	Not Available	2531	Open in IMG/M
3300010885\|Ga0133913_10956817	Not Available	2218	Open in IMG/M
3300010885\|Ga0133913_11182915	Not Available	1962	Open in IMG/M
3300010885\|Ga0133913_12061626	Not Available	1414	Open in IMG/M
3300010885\|Ga0133913_13309573	Not Available	1060	Open in IMG/M
3300013014\|Ga0164295_11029018	Not Available	639	Open in IMG/M
3300025532\|Ga0208249_1077466	Not Available	780	Open in IMG/M
3300027760\|Ga0209598_10030925	Not Available	2961	Open in IMG/M
3300027836\|Ga0209230_10133872	All Organisms → Viruses → Predicted Viral	1403	Open in IMG/M
3300027836\|Ga0209230_10281219	Not Available	959	Open in IMG/M
3300027892\|Ga0209550_10053126	Not Available	3260	Open in IMG/M
3300027892\|Ga0209550_10057750	Not Available	3094	Open in IMG/M
3300027892\|Ga0209550_10335426	Not Available	958	Open in IMG/M
3300027892\|Ga0209550_10576344	Not Available	664	Open in IMG/M
3300027892\|Ga0209550_10675817	Not Available	598	Open in IMG/M
3300031786\|Ga0315908_10483660	Not Available	1034	Open in IMG/M
3300031786\|Ga0315908_11573930	Not Available	510	Open in IMG/M
3300032092\|Ga0315905_10464689	Not Available	1174	Open in IMG/M
3300032092\|Ga0315905_10882649	Not Available	767	Open in IMG/M
3300032092\|Ga0315905_10977435	Not Available	715	Open in IMG/M
3300033978\|Ga0334977_0106159	Not Available	1497	Open in IMG/M
3300033978\|Ga0334977_0541013	Not Available	526	Open in IMG/M
3300033984\|Ga0334989_0637499	Not Available	506	Open in IMG/M
3300034019\|Ga0334998_0204744	Not Available	1224	Open in IMG/M
3300034021\|Ga0335004_0046978	Not Available	3039	Open in IMG/M
3300034021\|Ga0335004_0087451	Not Available	2109	Open in IMG/M
3300034021\|Ga0335004_0192470	All Organisms → Viruses → Predicted Viral	1279	Open in IMG/M
3300034021\|Ga0335004_0502452	Not Available	662	Open in IMG/M
3300034021\|Ga0335004_0618058	Not Available	571	Open in IMG/M
3300034021\|Ga0335004_0689894	Not Available	528	Open in IMG/M
3300034022\|Ga0335005_0169372	All Organisms → Viruses → Predicted Viral	1376	Open in IMG/M
3300034022\|Ga0335005_0171566	All Organisms → Viruses → Predicted Viral	1364	Open in IMG/M
3300034022\|Ga0335005_0250374	Not Available	1075	Open in IMG/M
3300034022\|Ga0335005_0415131	Not Available	768	Open in IMG/M
3300034022\|Ga0335005_0662210	Not Available	557	Open in IMG/M
3300034050\|Ga0335023_0003472	Not Available	9447	Open in IMG/M
3300034050\|Ga0335023_0012812	Not Available	4906	Open in IMG/M
3300034050\|Ga0335023_0028607	Not Available	3271	Open in IMG/M
3300034050\|Ga0335023_0057651	All Organisms → Viruses → Predicted Viral	2268	Open in IMG/M
3300034050\|Ga0335023_0062524	Not Available	2171	Open in IMG/M
3300034050\|Ga0335023_0090714	Not Available	1768	Open in IMG/M
3300034050\|Ga0335023_0097243	Not Available	1699	Open in IMG/M
3300034050\|Ga0335023_0118422	Not Available	1519	Open in IMG/M
3300034050\|Ga0335023_0152752	All Organisms → Viruses → Predicted Viral	1312	Open in IMG/M
3300034050\|Ga0335023_0221405	Not Available	1051	Open in IMG/M
3300034050\|Ga0335023_0311864	Not Available	851	Open in IMG/M
3300034050\|Ga0335023_0430902	Not Available	692	Open in IMG/M
3300034050\|Ga0335023_0584864	Not Available	568	Open in IMG/M
3300034051\|Ga0335024_0207516	Not Available	1041	Open in IMG/M
3300034051\|Ga0335024_0312087	Not Available	804	Open in IMG/M
3300034051\|Ga0335024_0469115	Not Available	619	Open in IMG/M
3300034051\|Ga0335024_0567859	Not Available	546	Open in IMG/M
3300034051\|Ga0335024_0568925	Not Available	545	Open in IMG/M
3300034060\|Ga0334983_0544157	Not Available	643	Open in IMG/M
3300034066\|Ga0335019_0765924	Not Available	548	Open in IMG/M
3300034068\|Ga0334990_0338175	Not Available	816	Open in IMG/M
3300034096\|Ga0335025_0072748	Not Available	2167	Open in IMG/M
3300034096\|Ga0335025_0196329	All Organisms → Viruses → Predicted Viral	1141	Open in IMG/M
3300034096\|Ga0335025_0257224	Not Available	954	Open in IMG/M
3300034096\|Ga0335025_0401991	Not Available	708	Open in IMG/M
3300034096\|Ga0335025_0568565	Not Available	563	Open in IMG/M
3300034107\|Ga0335037_0066754	Not Available	1943	Open in IMG/M
3300034107\|Ga0335037_0073714	Not Available	1848	Open in IMG/M
3300034107\|Ga0335037_0084433	Not Available	1720	Open in IMG/M
3300034107\|Ga0335037_0091849	Not Available	1646	Open in IMG/M
3300034109\|Ga0335051_0303271	Not Available	774	Open in IMG/M
3300034121\|Ga0335058_0104819	Not Available	1654	Open in IMG/M
3300034121\|Ga0335058_0543328	Not Available	655	Open in IMG/M
3300034122\|Ga0335060_0424343	Not Available	699	Open in IMG/M
3300034167\|Ga0335017_0025195	Not Available	3461	Open in IMG/M
3300034167\|Ga0335017_0051774	Not Available	2423	Open in IMG/M
3300034167\|Ga0335017_0074172	All Organisms → Viruses → Predicted Viral	2008	Open in IMG/M
3300034167\|Ga0335017_0087189	Not Available	1840	Open in IMG/M
3300034167\|Ga0335017_0125104	Not Available	1507	Open in IMG/M
3300034167\|Ga0335017_0129657	Not Available	1477	Open in IMG/M
3300034167\|Ga0335017_0139234	All Organisms → Viruses → Predicted Viral	1419	Open in IMG/M
3300034167\|Ga0335017_0356930	Not Available	801	Open in IMG/M
3300034167\|Ga0335017_0365525	Not Available	789	Open in IMG/M
3300034167\|Ga0335017_0486674	Not Available	655	Open in IMG/M
3300034167\|Ga0335017_0515436	Not Available	631	Open in IMG/M
3300034168\|Ga0335061_0099032	Not Available	1554	Open in IMG/M
3300034168\|Ga0335061_0283768	Not Available	868	Open in IMG/M
3300034168\|Ga0335061_0580139	Not Available	565	Open in IMG/M
3300034355\|Ga0335039_0023426	Not Available	3835	Open in IMG/M
3300034355\|Ga0335039_0112519	Not Available	1569	Open in IMG/M
3300034355\|Ga0335039_0498356	Not Available	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	82.18%
Lentic	Environmental → Aquatic → Freshwater → Lentic	12.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	82.18%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.95%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	67.33%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	14.85%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	8.91%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.95%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.98%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004128	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (version 2)	Environmental	Open in IMG/M
3300004773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009187	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300025532	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034051	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097	Environmental	Open in IMG/M
3300034060	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16May2013-rr0016	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034109	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME26Aug2009-rr0158	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066177_101193812	3300004096	Freshwater Lake	RRKVMRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVVGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY*
Ga0066177_101683851	3300004096	Freshwater Lake	MRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGKDPWDLEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY*
Ga0066180_100897532	3300004128	Freshwater Lake	MRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY*
Ga0007795_100351553	3300004773	Freshwater	MFILIGFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY*
Ga0070374_101858052	3300005517	Freshwater Lake	MFILIGFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESNFLY*
Ga0114973_100799963	3300009068	Freshwater Lake	MQKIEAVCGTFGLVSPREKTCLLHPVVGRFQTGDTIRVVQPAEVLQQLPWKLQDNKSCGLKVTFDLVHGKTLGNMTVRICWRTAVFRDEVGFVETHFMY*
Ga0114973_101034992	3300009068	Freshwater Lake	LYLTCFSPLYNRRKVMRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVVGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY*
Ga0114973_103543372	3300009068	Freshwater Lake	VCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPVEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWETAVYRDEPNYVESHFLY*
Ga0114963_107344761	3300009154	Freshwater Lake	MFILIGFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVC
Ga0114972_100409523	3300009187	Freshwater Lake	MRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVVGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY*
Ga0114972_100976192	3300009187	Freshwater Lake	MFFLIVFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPVEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY*
Ga0133913_102215804	3300010885	Freshwater Lake	MVTPREKICLLHPVVGHFQTGDTIRVVQPAEVIRQDPWELAENKSCGLRITYDVPEGHTVGTFTVRVCWCTAVFRDEVGYVGNHFTY*
Ga0133913_107371443	3300010885	Freshwater Lake	LRRLAGVCGTFGMVTPREKTCLLHSVVGRFATGDTIRVVQPAEVIAQSPWLLEDNKSCGLRMTFDVPHGKTLGTLTVRVCWRTTVFRDEVGYVESNFMY*
Ga0133913_107502324	3300010885	Freshwater Lake	MLKLAGMCGIYGMVTPREKTCLLHPVVGRFMTGDNIRVVLPAEVLRQLPWQLEENKSCGLRITFDVPEGHTVGTFTVRVCWCTTVFRDEVGYVDTHFTY*
Ga0133913_107596183	3300010885	Freshwater Lake	IFGMVSPCEKTCLLHPVVGRFHTGDIIRVVQPAEVVGQVPWVLEDNKSCGIRITFDVPHGKTLGTLTVRVCWRTAVYRDEIGYVETHFVY*
Ga0133913_109568172	3300010885	Freshwater Lake	MFILIRFSRLVLRQIESVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY*
Ga0133913_111829152	3300010885	Freshwater Lake	MVTPREKICLLHPVVGRFQTGDSIRVVLPAEVIRQLPWQLEDNKSCGLRVTFDVPEGETVGTFTVRVCWSTTVFRDEVGYVEKLFMY*
Ga0133913_120616262	3300010885	Freshwater Lake	MVSPREKTVLLHPVVGRFMTGDTMRVVQPAEVIGQVPWVLEGGKSCGLRVTFDVPRGKSFGTFTVRVCWRTSVYRDEVGYVEGHFMY*
Ga0133913_133095731	3300010885	Freshwater Lake	MFILIGLSRLVLRKIAGVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVSTTLPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESN
Ga0164295_110290181	3300013014	Freshwater	VCGTFGMVTPREKTCLLHSVVGGFATGDTIRVVQPAEVIAQSPWLLEDNKSCGLRMTFDVPHGKTLGTLTVRVCWRTTVFRDEVGYVESNFMY*
Ga0208249_10774661	3300025532	Freshwater	MFILIGFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0209598_100309252	3300027760	Freshwater Lake	MRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQLAEVVGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Ga0209230_101338722	3300027836	Freshwater And Sediment	MQKLAGVCGIFGMVTPREKTCLLHPVVGRFMTGDNIRVVLPAEVLRQLPWQLEENKSCGLRITFDVPEGHTVGTFTVRVCWCTTVFRDEVGYVDTHFTY
Ga0209230_102812192	3300027836	Freshwater And Sediment	MRQIAAVCGTFGMVSPREKACLLHPVVGRFMTGDTIRVVQPAEVVGKDPWELEGKKSCGLRLTFDLPNGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Ga0209550_100531264	3300027892	Freshwater Lake	MFILIGLSRLVLREIAGVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVSTTLPWALEGNKSCGLKTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESNFLY
Ga0209550_100577502	3300027892	Freshwater Lake	LRRLAGVCGTFGMVTPREKTCLLHSVVGRFATGDTIRVVQPAEVIAKSPWVLEDNKSCGLRMTFDVPHGKTLGTLTVRVCWRTTVFRDEVGYVESNFMY
Ga0209550_103354261	3300027892	Freshwater Lake	MRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Ga0209550_105763441	3300027892	Freshwater Lake	WELLCLYLTCFSPLYNRRKVMRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVVGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Ga0209550_106758171	3300027892	Freshwater Lake	MVTPREKTCLLHPVVGRFMTGDNIRVVLPAEVIRQLPWQLEDNKSCGLRVTFDVPEGETVGTFTVRVCWCTAVYRDEVGYVEQHFTY
Ga0315908_104836601	3300031786	Freshwater	MFILIGLSRLVLRKIAGVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVSTTLPWALEGNKSCGLRTTFDVPHGKSVGTFTVR
Ga0315908_115739301	3300031786	Freshwater	MLILIRFSRLVLRQIESVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDE
Ga0315905_104646892	3300032092	Freshwater	MFILIGFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKT
Ga0315905_108826491	3300032092	Freshwater	MFILIGLSRLVLRKIAGVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVSTTLPWALEGNKSCGLRTTFDVPHGKSVGTFTVRMCWKTAVYRDEPHYVE
Ga0315905_109774351	3300032092	Freshwater	LRRLAGVCGTFGMVTPREKTCLLHSVVGRFATGDTIRVVQPAEVIAQSPWLLEDNKSCGLRMTFDVPHGKTLGTLTVRVCWRTTVFRDEVGYVESNFMY
Ga0334977_0106159_180_512	3300033978	Freshwater	MLILIGLSRLVLRKIAGVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0334977_0541013_6_305	3300033978	Freshwater	MRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVVGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Ga0334989_0637499_125_388	3300033984	Freshwater	MVTPREKICLLHPVVGRFQTGDSIRVVLPAEVIRQLPWQLEDNKSCGLRVTFDVPEGETVGTFTVRVCWSTTVFRDEVGYVEKLFMY
Ga0334998_0204744_536_868	3300034019	Freshwater	MFILIRFSRLVLRQIESVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0335004_0046978_2287_2631	3300034021	Freshwater	MYLTCFSPLYNRRKVMRQIAAVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVVGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Ga0335004_0087451_2_292	3300034021	Freshwater	MFFLIVFSRFVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPVEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVY
Ga0335004_0192470_796_1095	3300034021	Freshwater	MQKLAGMCGIYGMVTPREKTCLLHPVVGRFMTGDNIRVVLPAEVLRQLPWQLEENKSCGLRITFDVPEGHTVGTFTVRVCWCTTVFRDEVGYVDTHFTY
Ga0335004_0502452_102_401	3300034021	Freshwater	MQKIEAVCGTFGLVSPREKTCLLHPVVGRFQTGDTIRVVQPAEVLQQLPWKLQDNKSCGLKVTFDLVHGKTLGNMTVRICWRTAVFRDEVGFVETHFMY
Ga0335004_0618058_87_440	3300034021	Freshwater	MRNSPCVFHCLFLACREALRQVVSASGTFGLVTPRDKTYLLHAVVGRFMTGDTIRVVQPAEVVLQVPWALEGNKSSGIRLTYDLAHGKTVGTLTVRICWRTTVYRDEDGFVEKHFLY
Ga0335004_0689894_21_320	3300034021	Freshwater	MHQIVAVSGKFGMVAPRDKTCLLHPVVGRFHTGDTVRVVQPAEIIAQVPWLLEGNKSCGLRFTFDVQRGKSVGTLTVRVCWRSAVYRDENGFVDKHFTY
Ga0335005_0169372_1091_1375	3300034022	Freshwater	CVEPTVWLVPVRRHVFCIQPVVGRFMTGDTIRVVQPAEVSTTLPWALEGNKSCGLRTTFDVPHGKTVGTFTVRVCWKTAVYRDEPNYVETHFLY
Ga0335005_0171566_312_611	3300034022	Freshwater	MQKLAGMCGIFGMVTPREKTCLLHPVVGRFMTGDNIRVVLPAEVLRQLPWQLEENKSCGLRITFDVPEGHTVGTFTVRVCWCTTVFRDEVGYVDTHFTY
Ga0335005_0250374_149_481	3300034022	Freshwater	MHQIVAVSGKFGMVAPRDKTCLLHPVVGRFHTGDTVRVVQPAEIIAQVPWLLEGNKSCGLRFTFDVQRGKSVGTLTVRVCWRSAVYRDEKALLTNTSRTDVYVKKLSVLT
Ga0335005_0415131_180_512	3300034022	Freshwater	MFFLIVFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPVEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0335005_0662210_1_294	3300034022	Freshwater	KIVGVCGTFGMVSPREKTVLLHPVVGRFMTGDTIRVVQPAEVIGQVPWVLEGGKSCGLRVTFDVPRGKSFGTFTVRVCWRTSVYRDEVGYVEGHFMY
Ga0335023_0003472_408_689	3300034050	Freshwater	MCGTFGLVTPREKTCLLHPVVGRFNTGDTIRVVQPAEVVGQAPWELENHKSCGLKVTYDLPHGKTLGYMAVRVCWNTAVYRDEYGFVETHFLY
Ga0335023_0012812_2046_2309	3300034050	Freshwater	MVTPREKICLLHPVVGHFQTGDTIRVVQPAEVIRQVPWELAENKTCGLRITYDVPEGHTVGTFTVRVCWCTAVFRDEVGYVGNHFTY
Ga0335023_0028607_980_1240	3300034050	Freshwater	MTPREKTCLLHPVVGRFNTGDTIRVVQPAEVVGQAPWELENHKSCGLKITYDLPYGKTLGYMTVRVCWNTAVYRDEHGFVETHFLY
Ga0335023_0057651_1138_1401	3300034050	Freshwater	MVSPREKTCLLHPVVGRFATGDTIRVVQPAEVLGKDPWELEGNKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Ga0335023_0062524_1315_1596	3300034050	Freshwater	MCGTFGLVTPREKTCLLHPVVGRFNTGDTIRVVQPAEVIGQAPWELENNKSCGLKVTYDLPHGKTLGYMAVRVCWNTAVYRDEYGYVETHFLY
Ga0335023_0090714_1_243	3300034050	Freshwater	MVSPREKTCLLHPVVGRFQTGDTIRVVQPAEVLGLVPWVLEDNKSCGLRLTFDVPHGKTFGTLTVRVCWRTQVFRDEVGFV
Ga0335023_0097243_1293_1595	3300034050	Freshwater	MLRHIQSVSGFFGMVTPREKTCLLHPVVGRLSSGDTIRIVQPAEVAHTVPWILEGNKSCGLRLTFDVHRGKSLGTLTVRVCWRTIVYRDEEGFDDFHFKY
Ga0335023_0118422_540_803	3300034050	Freshwater	MVTPREKTCLLHPVVGRFQTGDTIRVVLPAEIIRQLPWQLEDNKSCGLRVTFDVPEGETVGTFTVRVCWSTTVFRDEVGYVEKLFMY
Ga0335023_0152752_1022_1312	3300034050	Freshwater	NSRCLWYFWLVTPREKTCLLHPVVGRFMTGDTIRVVQPAEVLGQGPWQLEGDRSSGLRLTYDVVHGKGIGTLTVRVCWSTAVYRDEVGFVESHFMY
Ga0335023_0221405_223_552	3300034050	Freshwater	MRPRLSNRAVMRKIIGVCGTFGLVTPREKTCLLHPVVGRFNTGDTIRVVQPAEVVGQSPWELENHKSCGLKVTYDLPHSKTLGYMAVRVCWNTAVYRDENGFVETHFLY
Ga0335023_0311864_3_281	3300034050	Freshwater	GFFGMVTPREKTCLLHPVVGRLSSGDTIRIVQPAEVVHTASWILEGNNSCGLRLTFDVHRGKSLGTLTVRVCWRTIIVYRDEEGIDDFRFKY
Ga0335023_0430902_192_491	3300034050	Freshwater	MQKLAGVCGIFGMVTPRERICLLHPVVGRFQTGDTIRVVLPAEVVRQLPWQLEDNKSCGLRVTFDLPEGQTVGTLTVRVCWCTTVYRDECGYVENHFIY
Ga0335023_0584864_3_272	3300034050	Freshwater	MRQIAAVCGTFGMVSPRERTCLLHPVVGRFTTGDTIRVVQPAEVLGKDPWELEGNKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEV
Ga0335024_0207516_517_816	3300034051	Freshwater	MQKLAGVCGIFGMVTPRERICLLHPVVGRFQTGDTIRVVLPAEVVRQLPWQLEDNKSCGLRVTFDLPEGQTVGTLTVRVCWCTTVFRDECGYVENHFIY
Ga0335024_0312087_174_434	3300034051	Freshwater	VTPREKICLLHPVVGRFNTGDTIRVVQPAEVVGQAPWELENHKSCGLKITYDIPYGKTLGYMTVRVCWNTAVYRDEHGFVETHFLY
Ga0335024_0469115_330_617	3300034051	Freshwater	AGVCGTFGMVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVLGQVPWELEGNKSSGLRITFDLPHGKSFGTFTVRVCWCTSVYRDEPGYVESQYLY
Ga0335024_0567859_1_324	3300034051	Freshwater	PFDFRRKALQQIVGASGTFGLVTPREKTCLLHPVVGRFMTGDTIRVVQPAEVMGQTPWHIEGNRSSGLRLTYDVLHGKGIGTLTVRVCWCTLVYRDEIGFVERHFMY
Ga0335024_0568925_2_265	3300034051	Freshwater	MVTPREKTCLLHPVVGTFQTGDTIRVVQPAEVLHKSPWTLQDNKSCGLRLTFDVHRGKSLGTLTVRVCWRTAVYRDEPGFVDGHFTY
Ga0334983_0439928_290_625	3300034060	Freshwater	MTLLSLLLPSKVMQQLVSVSGMYGMVTPREKTCLLHPVVGRFHTGDTIRVVQPAEVIGQVPWVLEGNKSCGLRVTYDVRSGKSLGTFTVRVCWRTAIYRDEFGFDEKHFMY
Ga0334983_0544157_305_604	3300034060	Freshwater	MRRIVGVCGTFGLVTPREKTCLLHPVVGRFNTGDTIRVVQPAEVVGQAPWELENHKSCGLKVTYDLPHGKTLGYMAVRVCWNTAVYRDEYGFVETHFLY
Ga0335019_0765924_270_548	3300034066	Freshwater	MFILIGFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWK
Ga0334990_0338175_1_243	3300034068	Freshwater	ICLLHPVVGRFQTGDSIRVVLPAEVIRQLPWQLEDNKSCGLRVTFDVPEGETVGTFTVRVCWSTTVFRDEVGYVEKLFMY
Ga0335025_0072748_1_303	3300034096	Freshwater	MDFIRKALQQIVGVSGTFGLVTPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGQIPWQLEGNRSSGMRLTFDVQHGKGMGTLTVRVCWCTAVFRDEVGFVE
Ga0335025_0196329_215_547	3300034096	Freshwater	MFFLIVFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPVEVSTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0335025_0257224_364_663	3300034096	Freshwater	MHQIVAVSGKFGMVAPRDKTCLLHPVVGRFHTGDTVRVVQPAEIVAQVPWLLEGNKSCGLRFTFDVQRGKYVGTLTVRVCWRSAVYRDENGFVDKHFTY
Ga0335025_0401991_1_270	3300034096	Freshwater	YGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVSTTLPWALEGNKSCGLRTTFDVPHGKTVGTFTVRVCWKTAVYRDEPNYVETHFLY
Ga0335025_0568565_1_318	3300034096	Freshwater	THCSSVLQKIEGVCGTFGMVSPREKTVLLHPVVGRFMMGDTIRVVQPAEVIGQVPWVLEGGKSCGLRVTFDVPRGKSFGTFTVRVCWRTSVYRDEVGYVEGHFMY
Ga0335037_0066754_1438_1737	3300034107	Freshwater	MHQIVAVSGKFGMVAPRDKTCLLHPVVGRFHTGDTVRVVQPAEIVAQVPWLLEGNKSCGLRFTFDVQRGKSVGTLTVRVCWRSAVYRDENGFVDKHFTY
Ga0335037_0073714_613_876	3300034107	Freshwater	MVSPREKTVLLHPVVGRFMTGDTIRVVQPAEVLGQVPWVLEGGKSCGLRVTFDVPRGKSFGTFTVRVCWRTSVYRDEVGYVEGHFMY
Ga0335037_0084433_114_449	3300034107	Freshwater	MMFILIGLSRLVLRKIAGVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVSTTLPWALEGNKSCGLRTTFDVPHGKTVGTFTVRVCWKTAVYRDEPNYVETHFLY
Ga0335037_0091849_489_842	3300034107	Freshwater	MRNSPCVFHCLFLACREALRQVVSASGTFGLVTPRDKTYLLHAVVGRFMTGDTIRVVQPAEVVLQVPWALEGNKSSGIRLTYDLAHGKTVGTLTVRICWRTTVYRDEDGFVVKHFLY
Ga0335051_0303271_108_440	3300034109	Freshwater	MFILIGFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVRTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0335058_0104819_511_813	3300034121	Freshwater	MLRKIESVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0335058_0543328_232_495	3300034121	Freshwater	MVSPREKTVLLHPVVGRFMTGDTIRVVQPAEVIGQVPWVLEGGKSCGLRVTFDVPRGKSFGTFTVRVCWRTSVYRDEVGYVEGHFMY
Ga0335060_0424343_432_698	3300034122	Freshwater	MRRLAGVCGTFGMVTPREKTCLLHSVVGRFATGDTIRVVQPAEVIAQSPWLLEDNKSCGLRMTFDVPHGKTLGTLTVRVCWRTAVFRDE
Ga0335017_0025195_1368_1682	3300034167	Freshwater	MCSKVLRRIAAVSGIFGMVSPCEKTCLLHPVVGRFHTGDTIRVVQPAEVVGQVPWVLEDNKSCGLRLTFDVPHGKTLGTLTVRVCWRTAVYRDEVSYVETHFVY
Ga0335017_0051774_1769_2101	3300034167	Freshwater	MFILIGFSRLVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPAEVSTRLPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0335017_0074172_601_864	3300034167	Freshwater	MVSPREKACLLHPVVGRFMTGDTIRVVQPAEVVGKDPWELEGKKSCGLRLTFDLPHGKTVGTLTVRVCWRTAVFRDEVGFEERHFMY
Ga0335017_0087189_136_435	3300034167	Freshwater	MQKIEAVCGTFGLVSPREKTCLLHPVVGRFQTGDTIRVVQPAEVLQQLPWKLEDNKSCGLKVTFDLVHGKTLGNMTIRICWRTAVFRDEVGFVETHFMY
Ga0335017_0125104_269_625	3300034167	Freshwater	LQSIITVIFSFSLDFIRKALQQIVGVSGTFGLVTPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGQIPWQLEGNRSSGMRLTFDVQHGKGIGTLTVRVCWCTAVFRDEVGFVESHFLY
Ga0335017_0129657_1193_1477	3300034167	Freshwater	AVCGIFGMVTPREKICLLHPVVGHFQTGDTIRVVQPAEVIRQVPWELAENKTCGLRITYDVPEGHTVGTFTVRVCWCTAVFRDEVGYVGNHFTY
Ga0335017_0139234_806_1171	3300034167	Freshwater	MDLNYLSCFSLVKLLLYSHRAVMQKLADVCGIFGMVTPREKTCLLHPVVGRFTTGDTIRVVLPAEVVRQLPWQLEGNKSCELRITFDVPEGETVVTFTVRVCWCTTVFRDEVGYVEKHFT
Ga0335017_0356930_504_800	3300034167	Freshwater	MHKLSSVCGIFGMVTPREKICLLHPVVGRFQTGDTIRVVLPAEVIRQLPWQLEDNKSCGLRVTFDVPEGETVGTFTVRVCWSTTVFRDEVGYVENLFMY
Ga0335017_0365525_532_789	3300034167	Freshwater	TPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGQIPWQLEGNRSSGMRLTFDVQHGKGIGTLTVRVCWCTAVFRDEVGFVESHFLY
Ga0335017_0486674_371_655	3300034167	Freshwater	AVCGIFGMVTPREKICLLHPVVGHFQTGDTIRVVQPAEVIRQDPWELAENKSCGLRITYDVPEGHTVGTFTVRVCWCTAVFRDEVGYVGNHFTY
Ga0335017_0515436_383_631	3300034167	Freshwater	MHKLSSLCGIFGMVTPREKICLLHPVVGRFQTGDTIRVVLPAEVIRQLPWQLEDNKSCGLRVTFDVPEGETVGTFTVRVCWST
Ga0335061_0099032_1153_1452	3300034168	Freshwater	MQKIEAVCGTFGLVSPREKTCLLHPVVGRFQTGDTIRVVQPAEVLQQLPWKLEDNKSCGLKVTFDLVHGKTLGNMTVRICWRTAVFRDEVGFVETHFMY
Ga0335061_0283768_510_866	3300034168	Freshwater	LQSIITVIFSFSLDFIRKALQQIVGVSGSFGLVTPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGQIPWQLEGNRSSGMRLTFDVQHGKGIGTLTVRVCWCTAVFRDEVGFVESHFLY
Ga0335061_0580139_308_565	3300034168	Freshwater	MCGTFGLVTPREKTCLLHPVVGRFNTGDTIRVVQPAEVIGQAPWELENNKSCGLKVTYDLPHGKTLGYMAVRVCWNTAVYRDEYGY
Ga0335039_0023426_1738_2109	3300034355	Freshwater	MLLLQLQSILTVIFSFSLDFIRKALQQIVGVSGTFGLVTPREKTCLLHPVVGRFMTGDTIRVVQPAEVIGQIPWQLEGNRSSGMRLTFDVQHGKGMGTLTVRVCWCTAVFRDEVGFVESHFLY
Ga0335039_0112519_296_628	3300034355	Freshwater	MFFLIVFSRFVLRKIGSVCGTYGLVSPREKTCLLHPVVGRFMTGDTIRVVQPVEVCTRQPWALEGNKSCGLRTTFDVPHGKSVGTFTVRVCWKTAVYRDEPNYVESHFLY
Ga0335039_0498356_2_313	3300034355	Freshwater	CSSVLQKNVGVCGTFGMVSPREKTVLLHPVVGRFMTGDTIRVVQPAEVLGQVPWVLEGGKSCGLRVTFDVPRGKSFGTFTVRVCWRTSVYRDEVGYVEGHFMY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102436

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences