Metagenome Family F102410

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102410
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	94 residues
Representative Sequence	PPQYSGGPTGYRLMLKRQEMGEEMFEPAQVETTIRVLAAAHPDRPASTWDLLRSVVADSAKSLDQRLEQSGRLEPERFSLREANERLAKLLQYRRFA
Number of Associated Samples	76
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	26.00 %
% of genes near scaffold ends (potentially truncated)	73.27 %
% of genes from short scaffolds (< 2000 bps)	91.09 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.475 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.683 % of family members)
Environment Ontology (ENVO)	Unclassified (54.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.60% β-sheet: 0.00% Coil/Unstructured: 42.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF07929	PRiA4_ORF3	3.96
PF02796	HTH_7	1.98
PF10503	Esterase_PHB	0.99
PF13701	DDE_Tnp_1_4	0.99
PF14384	BrnA_antitoxin	0.99
PF13271	DUF4062	0.99
PF01526	DDE_Tnp_Tn3	0.99
PF01131	Topoisom_bac	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0550	DNA topoisomerase IA	Replication, recombination and repair [L]	0.99
COG1110	Reverse gyrase	Replication, recombination and repair [L]	0.99
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
All Organisms	root	All Organisms	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
cellular organisms	root	All Organisms → cellular organisms	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.94 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.95 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	4.95 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	4.95 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Herpetosiphonales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales	4.95 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.95 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Herpetosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae	4.95 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.95 %
Xanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
unclassified Herpetosiphonaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae	4.95 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.95 %
Xanthomonas campestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas campestris	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.48 %
Herpetosiphonaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	4.95 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4.95 %
Xanthomonas campestris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas campestris	0.99 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005591\|Ga0070761_10057865	All Organisms → cellular organisms → Bacteria	2186	Open in IMG/M
3300005602\|Ga0070762_10610092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	725	Open in IMG/M
3300005764\|Ga0066903_105751389	Not Available	652	Open in IMG/M
3300005764\|Ga0066903_107895885	Not Available	546	Open in IMG/M
3300009143\|Ga0099792_10702479	Not Available	654	Open in IMG/M
3300010043\|Ga0126380_10570022	Not Available	885	Open in IMG/M
3300010366\|Ga0126379_12097929	Not Available	667	Open in IMG/M
3300010376\|Ga0126381_100117705	All Organisms → cellular organisms → Bacteria → Proteobacteria	3431	Open in IMG/M
3300010376\|Ga0126381_101289318	Not Available	1056	Open in IMG/M
3300010398\|Ga0126383_11700626	Not Available	720	Open in IMG/M
3300010398\|Ga0126383_12307753	Not Available	624	Open in IMG/M
3300014169\|Ga0181531_10675064	Not Available	642	Open in IMG/M
3300014493\|Ga0182016_10831206	Not Available	512	Open in IMG/M
3300014499\|Ga0182012_10008008	All Organisms → cellular organisms → Bacteria	10485	Open in IMG/M
3300014499\|Ga0182012_10983125	Not Available	531	Open in IMG/M
3300014655\|Ga0181516_10334419	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300014838\|Ga0182030_10094421	All Organisms → cellular organisms → Bacteria	4190	Open in IMG/M
3300015360\|Ga0163144_11474559	Not Available	599	Open in IMG/M
3300016270\|Ga0182036_10133535	Not Available	1743	Open in IMG/M
3300016270\|Ga0182036_10338974	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300016294\|Ga0182041_10197008	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300016294\|Ga0182041_10382927	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300016294\|Ga0182041_10479330	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300016294\|Ga0182041_10632342	Not Available	943	Open in IMG/M
3300016319\|Ga0182033_10378420	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300016341\|Ga0182035_12157733	Not Available	505	Open in IMG/M
3300016371\|Ga0182034_10526300	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300016371\|Ga0182034_11666723	Not Available	560	Open in IMG/M
3300016387\|Ga0182040_10172456	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300016404\|Ga0182037_10801976	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300016404\|Ga0182037_11925504	Not Available	530	Open in IMG/M
3300018052\|Ga0184638_1233130	Not Available	639	Open in IMG/M
3300020027\|Ga0193752_1041897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2034	Open in IMG/M
3300020034\|Ga0193753_10027306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Xanthomonas → Xanthomonas campestris	3272	Open in IMG/M
3300020213\|Ga0163152_10108432	Not Available	1701	Open in IMG/M
3300025942\|Ga0207689_11050682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300027853\|Ga0209274_10312027	Not Available	808	Open in IMG/M
3300027884\|Ga0209275_10566269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	651	Open in IMG/M
3300028572\|Ga0302152_10224955	Not Available	610	Open in IMG/M
3300028573\|Ga0265334_10214773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	666	Open in IMG/M
3300029883\|Ga0311327_10130808	Not Available	1802	Open in IMG/M
3300029883\|Ga0311327_10182827	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300029911\|Ga0311361_11242232	Not Available	591	Open in IMG/M
3300029954\|Ga0311331_10516585	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300029987\|Ga0311334_10202578	Not Available	1519	Open in IMG/M
3300029999\|Ga0311339_11427094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	620	Open in IMG/M
3300030007\|Ga0311338_10272162	Not Available	1889	Open in IMG/M
3300030399\|Ga0311353_10815860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	795	Open in IMG/M
3300030503\|Ga0311370_10386324	Not Available	1766	Open in IMG/M
3300031233\|Ga0302307_10176980	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300031234\|Ga0302325_10062383	All Organisms → cellular organisms → Bacteria → Acidobacteria	7299	Open in IMG/M
3300031236\|Ga0302324_101797163	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031543\|Ga0318516_10584488	Not Available	638	Open in IMG/M
3300031561\|Ga0318528_10071119	Not Available	1791	Open in IMG/M
3300031573\|Ga0310915_10144654	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1641	Open in IMG/M
3300031573\|Ga0310915_10329624	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300031573\|Ga0310915_10903224	Not Available	619	Open in IMG/M
3300031640\|Ga0318555_10291391	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300031716\|Ga0310813_11862311	Not Available	566	Open in IMG/M
3300031744\|Ga0306918_10168642	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300031744\|Ga0306918_10400190	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300031748\|Ga0318492_10143267	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031765\|Ga0318554_10460402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	721	Open in IMG/M
3300031770\|Ga0318521_10232630	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300031770\|Ga0318521_10346548	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300031771\|Ga0318546_10320297	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300031833\|Ga0310917_10582519	Not Available	760	Open in IMG/M
3300031879\|Ga0306919_10268901	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300031890\|Ga0306925_12097950	Not Available	530	Open in IMG/M
3300031890\|Ga0306925_12100532	Not Available	529	Open in IMG/M
3300031897\|Ga0318520_10071805	Not Available	1879	Open in IMG/M
3300031897\|Ga0318520_10991818	Not Available	530	Open in IMG/M
3300031910\|Ga0306923_10319311	Not Available	1773	Open in IMG/M
3300031910\|Ga0306923_10323407	Not Available	1760	Open in IMG/M
3300031912\|Ga0306921_12101065	Not Available	598	Open in IMG/M
3300031941\|Ga0310912_10585320	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300031945\|Ga0310913_10103230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1931	Open in IMG/M
3300031945\|Ga0310913_10113305	Not Available	1846	Open in IMG/M
3300031946\|Ga0310910_10148008	Not Available	1794	Open in IMG/M
3300031946\|Ga0310910_10204048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1534	Open in IMG/M
3300031946\|Ga0310910_10326675	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300031954\|Ga0306926_11089066	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300032025\|Ga0318507_10327828	Not Available	666	Open in IMG/M
3300032025\|Ga0318507_10387585	Not Available	609	Open in IMG/M
3300032035\|Ga0310911_10170613	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300032039\|Ga0318559_10301461	Not Available	744	Open in IMG/M
3300032042\|Ga0318545_10029138	Not Available	1801	Open in IMG/M
3300032042\|Ga0318545_10302763	Not Available	575	Open in IMG/M
3300032052\|Ga0318506_10074608	Not Available	1414	Open in IMG/M
3300032052\|Ga0318506_10147394	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300032068\|Ga0318553_10406609	Not Available	713	Open in IMG/M
3300032090\|Ga0318518_10594164	Not Available	565	Open in IMG/M
3300032094\|Ga0318540_10210413	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300032261\|Ga0306920_100853020	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300033289\|Ga0310914_10212647	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1729	Open in IMG/M
3300033414\|Ga0316619_10064650	All Organisms → cellular organisms → Bacteria	2157	Open in IMG/M
3300033414\|Ga0316619_12186836	Not Available	506	Open in IMG/M
3300033416\|Ga0316622_103411796	Not Available	500	Open in IMG/M
3300033418\|Ga0316625_100950134	Not Available	759	Open in IMG/M
3300033475\|Ga0310811_11394939	Not Available	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.02%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.07%
Aquatic	Environmental → Aquatic	4.95%
Plants	Host-Associated → Plants	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.20%
Peat	Environmental → Terrestrial → Peat	12.87%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Sediment	Environmental → Aquatic → Sediment	0.99%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.92%
Loam	Environmental → Terrestrial → Soil → Loam	5.94%
Lake	Environmental → Aquatic → Freshwater → Lake	1.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.46%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.96%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.95%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.96%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020213	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070761_100578653	3300005591	Soil	MLKRQQRGEQMFQPAQVESSIRVLAAAHPDRPASTWDILRSVLADGAESLDRRLEQSGRLEPRRFSLREANERLAKLLLCRRFA*
Ga0070762_106100922	3300005602	Soil	SGGPTGYRLMLKRQDRGEQMFQPAQVESSIRVLAAAHPDRPASTWDILRSVLADGAESLDRRLEQSGRLEPRRFSLREANERLAKLLLCRRFA*
Ga0066903_1057513891	3300005764	Tropical Forest Soil	PPQYSGGPTGYRLMLKRQEMGEEMFEPAQVETTIRVLAAAHPDRPASTWDLLRSVVADSAKSLDQRLEQSGRLEPERFSLREANERLAKLLQYRRFA*
Ga0066903_1078958852	3300005764	Tropical Forest Soil	MLKRQQLGEHMFEPAQVETAIGVLAAAHPDRPASTWELLRSVLADSAESLDRRLEQSGRLEPGRFNLREVNERLAKLLEYRRFA*
Ga0099792_107024791	3300009143	Vadose Zone Soil	YRLMLKRQALGDMMCRPAEIESVIGLLAATHPDRPASTWELLRRALDEGCQSLDRRLEQQGPLAPERFRLREANERLDQRLKSRRFA*
Ga0126380_105700222	3300010043	Tropical Forest Soil	VCIGGRGATPPQYSGGPTGYRLLLKRQQMGEQMFQPEQVETAIRVLTAAHPDRPVSTWDLLRSVVADSAKSLDQRLEQSGRLEPERFSLKEANQRLAKLLEYRRFA*
Ga0126379_120979292	3300010366	Tropical Forest Soil	EWELRVVDLQDGAEGDETPMCVGGRGASPPQYSGGPTGYRLMLKRQERGEKMFEPSEVETTIQVLAAAHPDHPVSTWELLRSVLADGAKSLDRRLEQSGRLEPERFSLTEANQRLSKLLTYRRFA*
Ga0126381_1001177052	3300010376	Tropical Forest Soil	MLKRQQMGEQMFPPAQVETAIRVLTAAHPDRPVSTWDLLRSVVADSAKSLDHRLEQSGRLEPERFSLQEANQRLAKLLEYRRFA*
Ga0126381_1012893182	3300010376	Tropical Forest Soil	VEGDETPVCVGGRGAAPPQYSGGPTGYRLMLKRQEMGEEMFEPAQVETTIRVLAAAHPDRPASTWDLLRSVVADSAKSLDQRLEQSGRLEPERFSLREANERLAKLLQYRRFA*
Ga0126383_117006263	3300010398	Tropical Forest Soil	MGEHMFEPAQVETASGVLAAAHPDRPASTWELLRSVLADSAESLDRRLEQSGRLEPGRFNLREVNERLAKLLEYRRFA*
Ga0126383_123077531	3300010398	Tropical Forest Soil	GAAPPQYFGGPTGYRLMLKRQQMGEQMFEPAQVETAIGVLAAAHPDRPASTWELLRSVLAEGAKSLDRRLEQSGRLEPERFNLKAANARLAKLLEYRRFA*
Ga0181531_106750642	3300014169	Bog	MFPPAEVETVIGILTAEEPDRPANTWQVLRSVLAEECQSLDRRLEQYGPLQPERFSLREANERLGKLLGYRRFA*
Ga0182016_108312062	3300014493	Bog	GPTGYRLMLKRQEMGEQMFKPAQVETAIGVLAAAHPEHPANTWELLRSVLHDGTESLDRRLEQSGRLEPERFSLREANERLAKLLQYRRFA*
Ga0182012_1000800810	3300014499	Bog	YSGGPTGYRLMLKRQEMGDKMFPPAEVETVIGMLTSAHPDGPASTWEVLRDVIAKSGASLDRRLEESGPLTPGRFSLLEANERLAKLLQYRRFA*
Ga0182012_109831251	3300014499	Bog	YSGGPTGYRLMLKRQEMGDKMFPPAEVETVIGMLTSAHPDGPASTWEVLRDVIAKSGVSLDRRLEESGPLTPGRFSLLEANERLAKLLQYRRFA*
Ga0181516_103344191	3300014655	Bog	PTGYRLMLKRQEMGEQMFKPAQVETAIGVLAAAHPDHPANTWELLRSVLHDGTESLDRRLEQSGRLEPERFSLREANERLVKLLQYRRFA*
Ga0182030_100944215	3300014838	Bog	LISSLARAEDKTPVCVGGRGATPPQYSGGPTGYRLMLKRQEMGDKMFPPAEVETVIGMLTSAHPDGPASTWEVLRDVIAKSGASLDRRLEESGPLTPGRFSLLEANERLAKLLQYRRFA*
Ga0163144_114745592	3300015360	Freshwater Microbial Mat	CGGPTGYRLMLKRQKMGDKMCPPDEVESVIGMLAAAHPDGPASTWELLRSVLADGHQSLDRRLQQYGPLQPERFILREANERLAKLLAYRRFA*
Ga0182036_101335353	3300016270	Soil	EMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0182036_103389741	3300016270	Soil	DQWEWEFRVIDLQDGAEGDHTPVCVGGRGAAPPQYSGGPTGYRLMLKRQQLGEQMFQPAQIEATIGALTAAHPGGPVSTWELLRSVVADSAKSLDQRLQQSGRLEPQRFSLQEANQRLAQLLESRRLA
Ga0182041_101970082	3300016294	Soil	LQDGAESDETAVCVGGRGAAPPQYSGGPTGYRLMLKRQPMGEHMFEPAQVETAIGVLAAAHPDRPASTWELLRSVLADGAESLDRRLEQSGRLEPERFNLKEVNERLAKLLEYRRFA
Ga0182041_103829272	3300016294	Soil	PAQIEATIRALTAAHPDGPVSTWELLRSVVADSAKSLDQRLQQSGRLEPERFSLQEANQRLAQLLESRRLA
Ga0182041_104793302	3300016294	Soil	PAQIEATIRALTAAHPDGPVSTWELLRSVVADSAKSLDQRLEQSGRLEPERFSLKEANQRLAKLLESRRFA
Ga0182041_106323421	3300016294	Soil	MLKRQQMGEQMFHPAQVETAIRMLTSAHSDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPEQFSLKEANQRLAKLLESRRLA
Ga0182033_103784202	3300016319	Soil	DLQDGAEGDETPVCVGGRGAVPPQYSGGPTGYRLMLKRQERGEKMFEPAQVETTIRVLAATHPDRPANSWDLLRSVLADGTESLDRRLEQSGRLEPERFSLIEANERLAKLLQYRRFA
Ga0182035_121577331	3300016341	Soil	MLKRQERGENMFEPSEVETTIQVLAAAHPDHPVSTWELLRSVLADGAKSLDRRLEQSGRLEPERFSLTEANQRLSKLLTYRRFA
Ga0182034_105263001	3300016371	Soil	QQMGEQMFHPAQVETAIRMLTSAHPDRPVSTWELLRSVVADSTKSLDQRLEQSGRLEPERFSLKEANQRVAKLLESRRFA
Ga0182034_116667231	3300016371	Soil	PPQYSGGPTGYHLMLKRQQMGEQMFHPAQVETAIRMLTSAHSDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPEQFSLKEANQRLAKLLESRRFA
Ga0182040_101724562	3300016387	Soil	MFEPAQVETTIRVLAATHPDRPANTWDLLRSVLADGTESLDRRLEQSGRLEPERFSLIEANERLAKLLQYRRFA
Ga0182037_108019761	3300016404	Soil	HTPVCVGGRGAAPPQYSGGPTGYHLMLKRQQMGEQMFHPAQVETAIRMLTSAHSDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPEQFSLKEANQRLAKLLESRRFA
Ga0182037_119255041	3300016404	Soil	AAPPQYSGGPTGYRLMLKRQPMGEHMFEPAQVETAIGVLAATHPDRSASTWEWLRSVLADGAESLDRRLEQSGRLEPERFHLKEVNERLAKLLEYRRFA
Ga0184638_12331301	3300018052	Groundwater Sediment	GGPTGYRLMLKRQELGEKMCPPAEVETVIGILAAAHPDRPAGTWELLRSVLADGCQSLDRRLEQYGPLEPERFSLREANARLGKLLEYRRFA
Ga0193752_10418971	3300020027	Soil	PVCLGGRGAAPPQYSGGPTGYRLMLKRQELGEKMFEPAQVETALALLTAEQPASTRELLREVLTDGATSLDRRLEASGRLEPQRFSLKEANERLTQRQQHRRFL
Ga0193753_100273061	3300020034	Soil	GYRLMLKRQELGEKMFEPAQVETALALLTAEQPASTRELLREVLTDGATSLDRRLEASGRLEPQRFSLKEANERLTQRQQHRRFL
Ga0163152_101084321	3300020213	Freshwater Microbial Mat	PELLRRYVNLEDGSAGDETPVCLGGRGASPPQYCGGPAGYRLMRKRQELGESMCMEAEVETVIGLLTAAHPDQPVTSFELLRTVVADGCRSLDRRLEEFGPLEPERFRLQEANARLAKLLEYRRFL
Ga0207689_110506822	3300025942	Miscanthus Rhizosphere	MGEQMFEPAQVETAIGVLAAAHPDRPASTWELLRSVMTDGAESLDRRLEQSGRLEPERFSLREANERLTKVLQYRRFA
Ga0209274_103120271	3300027853	Soil	MLKRQQRGEQMFQPAQVESSIRVLAAAHPDRPASTWDILRSVLADGAESLDRRLEQSGRLEPQRFSLREA
Ga0209275_105662692	3300027884	Soil	PPPQYSGGPTGYRLMLKRQDRGEQMFQPAQVESSIRVLAAAHPDRPASTWDILRSVLADGAESLDRRLEQSGRLEPRRFSLREANERLAKLLLCRRFA
Ga0302152_102249552	3300028572	Bog	TGYRLMLKRQEMGDKMFPPAEVETVIGMLTSAHPDGPVSTWEVLRDVIAKSGVSLDRRLEESGPLTPGRFSLLEANERLAKLLQYRRFA
Ga0265334_102147732	3300028573	Rhizosphere	MLKRQEMGEQMFQPAQVETAIGVLAGAHPDSPPSTWDLLRSVLAEGAQSLDRRLEQSGRLEPERFSLREANERLSKLLQYRRFA
Ga0311327_101308082	3300029883	Bog	MLKRQEMGDKMFPPAEVETVIGMLTSAHPDGPASTWEVLRDVIAKSGVSLDRRLEESGPLTPGRFSLLEANERLAKLLQYRRFA
Ga0311327_101828272	3300029883	Bog	LQQGAEGDETPVCLGGRGATPPEYSGGPTGYGLMLKRQELGEKMFPPAEVETVIATLTAEAPDRPANTWQVLRSVLAEECQSLDRRLEQYGPLQPERFSLREANERLGKLLGYRRFA
Ga0311361_112422321	3300029911	Bog	IRMVDLQDGAEGDEAPVCVGGRGAALPQYCGGPTGYRLMLKSQEMGEQMFPPPQVESSIRVLAAAHPDCPASSWELLQRVLADGAESLDRRLEQSRRLEPERFRLQEVNERLAKLLQYRRFA
Ga0311331_105165852	3300029954	Bog	EGDETPVCLGGRGATPPEYSGGPTGYGLMLKRQELGEKMFPPAEVETVIATLTAGAPDRPANTWQVLRRVLAEECQSLDRRLEQYGPLQPERFSLREANERLGKLLGYRRFA
Ga0311334_102025785	3300029987	Fen	MLKRQEMGAKMFEPAQVETAIGVLAGGHPDHPASTWELLRGVLTDSTESLDRRLEQSGRLEPERFSLRESNERLAKLLQYRRLA
Ga0311339_114270942	3300029999	Palsa	EQMFQPAQVESSIRVLAAAHPDRPASTWDILRSVLADGAESLDRRLEQSGRLEPQRFSLREANERLAKLLLCRRFA
Ga0311338_102721622	3300030007	Palsa	RGATPPQYSGGPTGYRLMLKRQEMGDKMFPPAEVETVIGMLTSAHPDGPASTWEVLRDVIAKSGVSLDRRLEESGPLTPGRFSLLEANERLAKLLQYRRFA
Ga0311353_108158602	3300030399	Palsa	VVDLQDGAKGDETPVCVGGRGAPPPQYSGGPTGYRLMLKRQQRGEQMFQPAQVESSIRVLAAAHPDRPASTWDILRSVLADGAESLDRRLEQSGRLEPQRFSLREANERLAKLLLYRRFA
Ga0311370_103863242	3300030503	Palsa	QPGAAEDKTPMCVGGRGATPPQYSGGPTGYRLMLKRQEMGDKMFPPAEVETVIGMLTSAHPDGPASTWEVLRDVIAKSGVSLDRRLEESGPLTPGRFSLLEANERLAKLLQYRRFA
Ga0302307_101769802	3300031233	Palsa	SGGPTGYRLMLKRQEMGDKMFPPAEVETVIGMLTSAHPDGPASTWEVLRDVIAKSGVSLDRRLEESGPLTPGRFSLLEANERLAKLLQYRRFA
Ga0302325_100623836	3300031234	Palsa	DETPVCLGGRGATPPQYSGGATGYGLMLKRQELGEKMFPPAEVETVIATLTAEAPDRPANTWQVLRSVLAEECQSLDRRLEQYGPLQPERFSLREANERLAKLLGYRRFA
Ga0302324_1017971632	3300031236	Palsa	QMFEPVQVETAIGVLAAAHPDRPASTWELLRSVLTDGGESLDRRLEQSGRLEPEKFSLREANERLAKLLQCRRFA
Ga0318516_105844882	3300031543	Soil	MLKRQQMGEQMFQPAQVETAIRMLTSAHSDRPVSTWELLRSVVSDSAKSLDQRLEQSGRLEPERFSLKEANQRVAKLLESRRFA
Ga0318528_100711192	3300031561	Soil	MLKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0310915_101446542	3300031573	Soil	DGAEGDETPVCVGGRGAVPPQYSGGPTGYRLMLKRQERGEKMFEPAQVETTIRVLAATHPDRPANTWDLLRSVLADGTESLDRRLEQSGRLEPERFSLIEANERLAKLLQYRRFA
Ga0310915_103296242	3300031573	Soil	MLKRQPMGEHMFEPAQVETAIGVLAATHPDRPASTWEWLQSVLADGAESLDRRLEQSGRLEPERFHLIEVNERLAKLLEYRRFA
Ga0310915_109032242	3300031573	Soil	MFQPAQVETAIRMLTSAHPDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPERFSLQEANQRLAKLVESRRFA
Ga0318555_102913911	3300031640	Soil	MFHPAQVETAIRMLTSAHSDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPERFSLKEANQRLAQLLESRRLA
Ga0310686_1105117182	3300031708	Soil	EPAQVETAIGVLAAAHPDRPASTWELLRSVLTDGGESLDRRLEQSGRLEPEKFSLREANERLAKLLQYRRFA
Ga0310813_118623111	3300031716	Soil	ETPVCVGGRGAAPPQYSGGPTGYRMMLRRQEMGEKMFEPAQVETAIGVLAAAHPDHPASTWELLRGVLTDSTESLDRRLEQSARLEPERFRLREANERLAKLLQYRRLA
Ga0306918_101686422	3300031744	Soil	MLKRQQMGEQMFQPAQVETAIGLLTSAHPDRPVSTWDLLRSVVADSAKSLDQRLQQSGRLEPERFSLQEANQRLAKLLESRRFA
Ga0306918_104001902	3300031744	Soil	APPQYSGGPTGYRLMLKRQPMGEHMFEPAQVETAIGVLAATHPDRPASTWEWLRSVLADGAESLDRRLEQSGRLEPERFHLIEVNERLAKLLEYRRFA
Ga0318492_101432672	3300031748	Soil	QYSGGPTGYRLRLKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318554_104604021	3300031765	Soil	PAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318521_102326301	3300031770	Soil	GPTGYHLMLKQQQMGEQMFHPAQVETAIRMLTSAHPDRPVSTWELLRSVVADSTKSLDQRLEQSGRLEPERFSLKEANQWLAKLLESRRFA
Ga0318521_103465482	3300031770	Soil	RVIDSQDGAEGDETPVCVGGRGAPPPQYSGGPTGYRLRLKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRF
Ga0318546_103202972	3300031771	Soil	RGARPPQYSGGPTGYRLMLKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0310917_105825191	3300031833	Soil	DGAEGDHTPVCVGGRGAAPPQYSGGPTGYHLMLKRQQMGEQMFHPAQVETAIRMLTSAHSDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPEQFSLKEANQRLAKLLESRRFA
Ga0306919_102689011	3300031879	Soil	CVGGRGAVPPQYSGGPTGYRLMLKRQERGEKMFEPAQVETTIRVLAATHPDRPANTWDLLRSVLADGTESLDRRLEQSGRLEPERFSLIEANERLAKLLQYRRFA
Ga0306925_120979501	3300031890	Soil	MLKRQQMGEQMFHPAQVETAIRMLTSAHSDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPERFSLKEANQRLAKLLESRRFA
Ga0306925_121005322	3300031890	Soil	VRRWTGSGAPPQYSGGPTGYRLMPKRQPMGEHMFEPAQVESAIGVLAATHPDRPASTWEWLRSVLANGAESLDRRLEQSGRLEPERFHLIEVNERLVKLLEYRRFA
Ga0318520_100718052	3300031897	Soil	MLKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLKRRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318520_109918182	3300031897	Soil	VPPQYSGGPTGYRLMLKRQERGEKMFEPAQVETTIRVLAATHPDRPANTWDLLRSVLADGTESLDRRLEQSGRLEPERFSLIEANERLAKLLQYRRFA
Ga0306923_103193112	3300031910	Soil	EWEFRIIDLQDGAEGDHTPVCVGGRGAAPPQYSGGPTGYHLMLKRQQMGEQMFHPAQVETAIRMLTSAHSDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPEQFSLKEANQRLAKLLESRRFA
Ga0306923_103234071	3300031910	Soil	MLKRQEMGEKMFGPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0306921_121010652	3300031912	Soil	MLKRQHLGEQMFQPAQIEATIGALTAAHPGGPVSTWELLRSVVAYSAKSLDQRLEQSGRLEPERFSLKEANQRLAQLLESRRLA
Ga0310912_105853201	3300031941	Soil	LKRQQMGEQMFQPAQVETAIRMLTSAHSDRPVSTWELLRSVVSDSAKSLDQRLEQSGRLEPERFSLKEANQRVAKLLESRRFA
Ga0310913_101032301	3300031945	Soil	DLQDGAEGDHTPVCVGGQGAAPPQYSGGPTGYHLMLKRQQMGEQMFQPAQVETAIRMLTSAHSDRPVSTWELLRSVVSDSAKSLDQRLEQSGRLEPERFSLKEANQRVAKLLESRRFA
Ga0310913_101133051	3300031945	Soil	FLCTLGALDQWEWEVRVIDLQDGAEGDETPVCVGGRGAPPPQYSGGPTGYRLRLKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0310910_101480082	3300031946	Soil	QEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0310910_102040482	3300031946	Soil	QPAQIEATIGALTAAHPDGPVSTWELLRSVVADSAKSLDQRLEQSGRLEPERFSLKEANQRLAQLLESRRLA
Ga0310910_103266752	3300031946	Soil	YRLMPKRQPMGEHMFEPAQVESAIGVLAATHPDRPASTWEWLQSVLADGAESLDRRLEQSGRLEPERFHLKEVNERLVKLLE
Ga0306926_110890661	3300031954	Soil	LKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318507_103278281	3300032025	Soil	PTGYRLRLKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318507_103875852	3300032025	Soil	MFEPAQVETTIRVLAATHPDRPANTWDLLRSVLADGTESLDRRLEQSGRLEPERFSLIEANEHLAKLLQYRRFA
Ga0310911_101706131	3300032035	Soil	YSGGPTGYRLMLKRQEMDEKMFGPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318559_103014612	3300032039	Soil	QREWEFRVIDLQDGAEGDHTPVCVGGRGAAPPQYSGGPTGYRLMLKRQQLGEQMFQPAQIEATIGALTAAHPDGPVSTWELLRSVVADSAKSLDQRLQQSGRLEPERFSLQEANQRLAQLLESRRLA
Ga0318545_100291381	3300032042	Soil	QYSGGPTGYRLMLKRQQLGEQMFQPAQIEATIGALTAAHPDGPVSTWELLRSVVADSAKSLDQRLEQSGRLEPERFSLQEANQRLAQLLESRRLA
Ga0318545_103027631	3300032042	Soil	MFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318506_100746082	3300032052	Soil	TGYRLRLKRQEMGEKMFEPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318506_101473942	3300032052	Soil	VGPPQYSGGPTGYRLMLKRQQLGEQMFQPAQIEATIGALTAAHPDGPVSTWELLRSVVADSAKSLDQRLQQSGRLEPERFSLQEANQRLAQLLESRRLA
Ga0318553_104066092	3300032068	Soil	MDLQDGAEGDETPVCVGGRGAPPPQYSGGPTGYRLMLKRQEMGEKMFGPAQVETTIRVLTAAHPDRPASTWDLLRSVLADGAKSLERRLEESGRLEPERFSLKEANERLARLLQYRRFV
Ga0318518_105941642	3300032090	Soil	MLKRQQLGEQMFQPAQIEATIRALTAAHPDGPVSTWELLRSVVADSAKSLDQRLEQSGRLEPERFSLKEANQRLAQLLESRRLA
Ga0318540_102104132	3300032094	Soil	MLKRQQMGEQMFHPAQVETAIRMLTSAPSDRPVSTWELLRSVVADSAKSLDQRLEQSGRLEPEPFSLKAANQRLAKLLESRRFA
Ga0306920_1008530201	3300032261	Soil	APKVTKRRCVSGGRGATPPQYSGGPTGYRLMLKRQQMGEQMFQPAQVETAIGLLTSAHPDRPVSTWDLLRSVVADSAKSLDQRLQQSGRLEPERFSLQEANQRLAKLVESRRFA
Ga0310914_102126471	3300033289	Soil	MLKRQQMGEQMFQPAQVETAIGLLTSAHPDRPVSTWDLLRSVVADSAKSLDQRLQQSGRLEPERFSLQEANQRLAQLLESRRLA
Ga0316619_100646501	3300033414	Soil	KRQEMGQKMFQPAQVESSIGVLAAACPDRPASTWDLLRSVLADGAESLDRRLEQSGRLEPERFSLREANERLAKLLQLRRFA
Ga0316619_121868361	3300033414	Soil	QMFQPAQVESTIGVLAAAHPDRPASTWDLLRSVLADGAESRARRLEQSGRLEPERFSLREATERLVKLLEYRRFA
Ga0316622_1034117962	3300033416	Soil	MGQQMFPPAQVESSIGVLAAACPDRPASTWDLLRSVLADGAESLDRRLEQSGRLEPERFSLREANERLAKLLQLRRFA
Ga0316625_1009501341	3300033418	Soil	DGAEGDETPVCVGGRGAAPPQYCGGPTGYRLMLKRQAMGEQMSPPAQVESSIGVLAAACPDHPPSTWELLRSVLADGAESLDRRLEQSGRLEPQRFSLREANERLAKLLQLRRFA
Ga0310811_113949391	3300033475	Soil	RRQEMGEKMFEPAQVETAIGVLAAAHLDHPASTWELLRGVLTDSTESLDRRLEQSARLEPGRFRLREANERLAKLLQYRRLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102410

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences