Metagenome Family F102274

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102274
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	113 residues
Representative Sequence	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGKGKAVRVVDLYI
Number of Associated Samples	70
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.44 %
% of genes near scaffold ends (potentially truncated)	58.42 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.446 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.555 % of family members)
Environment Ontology (ENVO)	Unclassified (72.277 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.446 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.12% β-sheet: 10.22% Coil/Unstructured: 57.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00476	DNA_pol_A	13.86
PF05119	Terminase_4	0.99
PF01527	HTH_Tnp_1	0.99
PF00589	Phage_integrase	0.99
PF13683	rve_3	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	13.86
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.45 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.45 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.45 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	53.47 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.48 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	44.55 %
Unclassified	root	N/A	44.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	44.55 %
Unclassified	root	N/A	44.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	44.55 %
Unclassified	root	N/A	44.55 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	44.55 %
Unclassified	root	N/A	44.55 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.97 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.99 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	44.55 %
Unclassified	root	N/A	44.55 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	2.97 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1046348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	782	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10087290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	663	Open in IMG/M
3300004633\|Ga0066395_10696013	Not Available	603	Open in IMG/M
3300005332\|Ga0066388_106928314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	570	Open in IMG/M
3300005713\|Ga0066905_101816527	Not Available	562	Open in IMG/M
3300005764\|Ga0066903_100182369	All Organisms → cellular organisms → Bacteria → Proteobacteria	3098	Open in IMG/M
3300005764\|Ga0066903_100628464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1870	Open in IMG/M
3300005764\|Ga0066903_102618110	Not Available	978	Open in IMG/M
3300005764\|Ga0066903_105861370	Not Available	645	Open in IMG/M
3300005764\|Ga0066903_106358086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	616	Open in IMG/M
3300010046\|Ga0126384_12110089	Not Available	541	Open in IMG/M
3300010047\|Ga0126382_10663557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	869	Open in IMG/M
3300010048\|Ga0126373_10593353	Not Available	1160	Open in IMG/M
3300010048\|Ga0126373_12692398	Not Available	555	Open in IMG/M
3300010358\|Ga0126370_10151720	Not Available	1690	Open in IMG/M
3300010358\|Ga0126370_12313797	Not Available	532	Open in IMG/M
3300010359\|Ga0126376_10275211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1448	Open in IMG/M
3300010360\|Ga0126372_10266333	Not Available	1482	Open in IMG/M
3300010362\|Ga0126377_10700970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1065	Open in IMG/M
3300010366\|Ga0126379_10028861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	4296	Open in IMG/M
3300010366\|Ga0126379_13463149	Not Available	528	Open in IMG/M
3300010376\|Ga0126381_101126979	Not Available	1133	Open in IMG/M
3300010376\|Ga0126381_102422479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	753	Open in IMG/M
3300012971\|Ga0126369_10442159	Not Available	1347	Open in IMG/M
3300012971\|Ga0126369_12754887	Not Available	575	Open in IMG/M
3300012971\|Ga0126369_13231926	Not Available	534	Open in IMG/M
3300016294\|Ga0182041_10867484	Not Available	810	Open in IMG/M
3300016319\|Ga0182033_12149337	Not Available	509	Open in IMG/M
3300016357\|Ga0182032_10884692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	758	Open in IMG/M
3300016371\|Ga0182034_10007351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5982	Open in IMG/M
3300016371\|Ga0182034_10632253	Not Available	906	Open in IMG/M
3300016371\|Ga0182034_10792133	Not Available	811	Open in IMG/M
3300016371\|Ga0182034_10822367	Not Available	796	Open in IMG/M
3300016371\|Ga0182034_11625561	Not Available	567	Open in IMG/M
3300016387\|Ga0182040_11939222	Not Available	505	Open in IMG/M
3300016404\|Ga0182037_11138940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	684	Open in IMG/M
3300016404\|Ga0182037_11568024	Not Available	585	Open in IMG/M
3300016404\|Ga0182037_11930368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	529	Open in IMG/M
3300016422\|Ga0182039_11826283	Not Available	557	Open in IMG/M
3300016445\|Ga0182038_10483917	Not Available	1053	Open in IMG/M
3300016445\|Ga0182038_10910043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	775	Open in IMG/M
3300021560\|Ga0126371_10258846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1856	Open in IMG/M
3300021560\|Ga0126371_13538989	Not Available	527	Open in IMG/M
3300031543\|Ga0318516_10337998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	869	Open in IMG/M
3300031544\|Ga0318534_10525158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	675	Open in IMG/M
3300031545\|Ga0318541_10020793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3136	Open in IMG/M
3300031545\|Ga0318541_10214441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1067	Open in IMG/M
3300031546\|Ga0318538_10079144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1667	Open in IMG/M
3300031564\|Ga0318573_10175982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1129	Open in IMG/M
3300031572\|Ga0318515_10156158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1217	Open in IMG/M
3300031573\|Ga0310915_10008874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5755	Open in IMG/M
3300031640\|Ga0318555_10304868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	862	Open in IMG/M
3300031668\|Ga0318542_10411957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	698	Open in IMG/M
3300031679\|Ga0318561_10041250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	2276	Open in IMG/M
3300031679\|Ga0318561_10377136	Not Available	778	Open in IMG/M
3300031679\|Ga0318561_10521517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	654	Open in IMG/M
3300031680\|Ga0318574_10412075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	790	Open in IMG/M
3300031682\|Ga0318560_10440721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	705	Open in IMG/M
3300031682\|Ga0318560_10528732	Not Available	639	Open in IMG/M
3300031719\|Ga0306917_11381706	Not Available	543	Open in IMG/M
3300031724\|Ga0318500_10420650	Not Available	666	Open in IMG/M
3300031744\|Ga0306918_10451425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1005	Open in IMG/M
3300031744\|Ga0306918_11523074	Not Available	511	Open in IMG/M
3300031751\|Ga0318494_10930183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	510	Open in IMG/M
3300031765\|Ga0318554_10564736	Not Available	642	Open in IMG/M
3300031768\|Ga0318509_10736514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	546	Open in IMG/M
3300031777\|Ga0318543_10121041	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300031778\|Ga0318498_10506482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	531	Open in IMG/M
3300031781\|Ga0318547_10268085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1032	Open in IMG/M
3300031782\|Ga0318552_10687260	Not Available	522	Open in IMG/M
3300031794\|Ga0318503_10015298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2095	Open in IMG/M
3300031794\|Ga0318503_10095833	Not Available	939	Open in IMG/M
3300031795\|Ga0318557_10376686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	652	Open in IMG/M
3300031797\|Ga0318550_10007680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	3997	Open in IMG/M
3300031797\|Ga0318550_10116688	Not Available	1267	Open in IMG/M
3300031805\|Ga0318497_10433588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	736	Open in IMG/M
3300031845\|Ga0318511_10468980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	581	Open in IMG/M
3300031890\|Ga0306925_10157374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2446	Open in IMG/M
3300031890\|Ga0306925_11823010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	582	Open in IMG/M
3300031896\|Ga0318551_10372168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	810	Open in IMG/M
3300031910\|Ga0306923_10099528	All Organisms → cellular organisms → Bacteria	3280	Open in IMG/M
3300031910\|Ga0306923_12109142	Not Available	568	Open in IMG/M
3300031941\|Ga0310912_10242825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1384	Open in IMG/M
3300031947\|Ga0310909_10607611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	913	Open in IMG/M
3300031947\|Ga0310909_10844313	Not Available	755	Open in IMG/M
3300031954\|Ga0306926_10315504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1934	Open in IMG/M
3300031954\|Ga0306926_10783470	Not Available	1151	Open in IMG/M
3300032001\|Ga0306922_11478891	Not Available	680	Open in IMG/M
3300032001\|Ga0306922_11871982	Not Available	588	Open in IMG/M
3300032035\|Ga0310911_10753038	Not Available	564	Open in IMG/M
3300032041\|Ga0318549_10041323	Not Available	1870	Open in IMG/M
3300032043\|Ga0318556_10758290	Not Available	505	Open in IMG/M
3300032044\|Ga0318558_10405824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	678	Open in IMG/M
3300032059\|Ga0318533_10182159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1498	Open in IMG/M
3300032064\|Ga0318510_10425773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	568	Open in IMG/M
3300032066\|Ga0318514_10009274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	4171	Open in IMG/M
3300032076\|Ga0306924_12551477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	511	Open in IMG/M
3300032090\|Ga0318518_10260812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	889	Open in IMG/M
3300032090\|Ga0318518_10485772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	633	Open in IMG/M
3300032094\|Ga0318540_10395067	Not Available	668	Open in IMG/M
3300032261\|Ga0306920_101552532	Not Available	943	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.08%
Loam	Environmental → Terrestrial → Soil → Loam	7.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10463481	3300000655	Forest Soil	MRTSDFVIQGKELRALMKKMGTRRSVKTQQKSGFKVQWVKFPLRWIRILREVAATGSTYDLALTILVESFKLEQMAVKEVILSAEVTGLPRMSRMRAINNLVRLNLIKIRRGKGKAVRVVDLYI*
AF_2010_repII_A001DRAFT_100872901	3300000793	Forest Soil	MQISDFLIQGRELRALMKRMEARRSKMKTRKKSGFEVRWVRLPLRWIRILHQAAVSASTYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRGKGKAVRVVDLYI*
Ga0066395_106960131	3300004633	Tropical Forest Soil	AQRSKAKTRKKSRFEVQWVKLPFRWIRILHEATVMGSTYDLALTILVESFKLEQMAVKEVILSAEVTGLPRMSRMRAINNLVRLNLIKIRRGKGKAVRVVDLYI*
Ga0066388_1069283141	3300005332	Tropical Forest Soil	MPISDFIIQGKEMRALMKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI*
Ga0066905_1018165271	3300005713	Tropical Forest Soil	MRALMKKMGAQRSKAKTRRKSGFEVRWVKLPFRWIRILHQAAVSASTYDLAHTILVESFKLEQMAVKGIVLSAEVTGLSQGTRKRAINNLVRLNLIKVKRGKGKAVRVVDLYI*
Ga0066903_1001823693	3300005764	Tropical Forest Soil	MRRKRAPRRKTKKRKKSGFEVKWVKLPFRWIERLRGARGPTYDLAYTILVENYKLDQMAVKEIVLSEQVTGQSRHIRQRAINNLVKRGLIRVKRGKGKAVRVVDLYI*
Ga0066903_1006284641	3300005764	Tropical Forest Soil	MPISDFLIQGKELRALMRRMGAPRSKGKTRKKSGFKVRWIKLPFRWIRILHQAAASGSTYDLAHTILVESFKLEQMAVKEVVMSEEVTGMSPTVRRKAINNLVRLNLIKVKRGKGKAVRVVDLYI*
Ga0066903_1026181102	3300005764	Tropical Forest Soil	MPISDFVIQGKEMRALMRKMGAQRSKTKTRKKSGFEVKWVKLPFRWIEILHQAAVSASTYDLALTILVESFKLDQMAVREIVLSEQVTGLSRRTRQRAVSNLVRLKLIKAKRGKGKAVRVVDLYI*
Ga0066903_1058613701	3300005764	Tropical Forest Soil	MQISDFLIQGRELRALMKRMEARRSKMKTRKKAGFEFRWVRLPLRWIRILHQAAVSASTYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRGKGKAVRVVDLYI*
Ga0066903_1063580861	3300005764	Tropical Forest Soil	MKKRGAQRSKAKRQKKSRFEVEWIKLPLRWIRILHQAAVSASTHDLAHTILVESFKLEQMAVKEVVLSAGVTGLSQHARERAINNLVRLKLIKVKRGKGKAVRVVDLYI*
Ga0126384_121100891	3300010046	Tropical Forest Soil	SDFIIQGKEMRALMKKMGAQRSKAKTRRKSGFEVRWVKLPFRWIRILHQAAVSASTYDLAHTILVESFKLEQMAVKGIVLSAEVTGLSQGTRKRAINNLVRLNLIKVKRGKGKAVRVVDLYI*
Ga0126382_106635571	3300010047	Tropical Forest Soil	MRTSDFVIQGKELRALMKKMGTRRSVKTQQKSGFKVQWVKFPLRWIRILREVAATGSTYDLALTILVESFKLEQMAVKEVILSAEVTGLPRMSRMRAINNLVRLNLIKIRRGKGKAVRVVELYI*
Ga0126373_105933532	3300010048	Tropical Forest Soil	QGKEMRALMKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI*
Ga0126373_126923981	3300010048	Tropical Forest Soil	MPISDFLIQGKELRALMRRMGAQRSKGKTRKKSGFKVRWIKLPFRWIRILHQAAASGSTYDLAHTILVESFKLEQMAVKEVVMSEEVTGMSPTVRRKAINNLVRLNLIKVKRGKGKAVRVVDLYI*
Ga0126370_101517201	3300010358	Tropical Forest Soil	KKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI*
Ga0126370_123137971	3300010358	Tropical Forest Soil	MPISDFIIQGKEMRALMKKRGAQRSKAKRQKKSRFEVEWIKLPLRWIRILHQAAVSASTHDLAHTILVESFKLEQMAVKEVVLSAGVTGLSQHARERAINNLVRLKLIKVKRGKGKAVRVVDLYI*
Ga0126376_102752112	3300010359	Tropical Forest Soil	MGAQRSKAKTWKKSRFEVQWVKLPLRWIRILHQTAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI*
Ga0126372_102663331	3300010360	Tropical Forest Soil	KSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI*
Ga0126377_107009702	3300010362	Tropical Forest Soil	AIPTASSTNASARMECGIGTGLWHWLRRRKMPISDFIIQGKEMRALMKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI*
Ga0126379_100288614	3300010366	Tropical Forest Soil	MGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI*
Ga0126379_134631491	3300010366	Tropical Forest Soil	MQISDFLIQGRELRALMKRMEARRSKMKTRKKAGFEFRWVRLPLRWIRILHQAAVSASTYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRGKGKAVKVVDLYI*
Ga0126381_1011269792	3300010376	Tropical Forest Soil	MSTSDFVIQGKELRALMKKMGTRRSVKTQQKSGFKVQWVKFPLRWIRILREVAATGSTYDLALTILVESFKLEQMAVKEVILSAEVTGLPRMSRMRAINNLVRLNLIKIRRGKGKAVRVVDLYI*
Ga0126381_1024224792	3300010376	Tropical Forest Soil	MPISDFIVQDKKLRVLMKKMGARQSKAKTRKKTGFEVQWVKLPLRWIRILHQAAVSASTHDLAHTILVESFKLEQMAVKEVVLSAGVTGLSQHARERAINNLVRLKLIKVKRGRGKAVRVVDLYI*
Ga0126369_104421593	3300012971	Tropical Forest Soil	PISDFLIRGKELRALMRRMGAQRSKGKTRKRSGFKVRWIKLPFRWIRILHQAAASGSTYDLAHTILVESFKLEQMAVKEVVMSEEVTGMSPTVRRKAINNLVRLNLIKVKRGKGKAVRVVDLYI*
Ga0126369_127548871	3300012971	Tropical Forest Soil	RALMKRMGAQRSKAKTRKKSRFEVQWVKLPFRWIRILHEATVTGSTYDLALTILVESFRLEQMAVKEIVLSEKVTGLSKDARKKAVDNLVRLKLIKIKRGAGKAVRVIDLYI*
Ga0126369_132319261	3300012971	Tropical Forest Soil	KMPISDFIIQGKEMRALMKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI*
Ga0182041_108674841	3300016294	Soil	KTQQKSGFKVQWVKFPFRWISILREVAATGSTYNLALTILVESFKLEQMAVKEIILSAEVTGLPRMSRMRAINNLVRLNLIKIRRGKGKAVRVIDLYI
Ga0182033_121493372	3300016319	Soil	KKRKKSGFEFQWVKLPLRWIRILHQAAVSASTYDLAHTILVESFKLEQMAVKEIVLSAHVTGLSKHARTQAINNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0182032_108846922	3300016357	Soil	MGVQRSKAKTQKRSKFEVQWVKLPLRWIRILHQAAVSPSTYDLAHTILVESFKLEQMAVKEIVLSAHVTGLSKHARTQAINNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0182034_100073515	3300016371	Soil	MQISDFLIQGRELRALMKRMEARRSKMKTRKKSGFEVRWVRLPLRWIRILHQAAVSASIYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRGKGKAVRVVDLYI
Ga0182034_106322531	3300016371	Soil	MSTSDFVIQGKELRALMKKMGTRRSVKTQQKSGFKVQWVKFPFRWISILREVAATGSTYNLALTILVESFKLEQMAVKEIILSAEVTGLPRMSRTRAINNLVRLNLIKIRRGKGKAVRVIDLYI
Ga0182034_107921331	3300016371	Soil	KRSKFEVQWVKLPLRWIRILHQAAVSSSTYDLAHTILVESFKLEQMAVKEIILSEQVTGLSRRIRQRAINNLVRLKLIKVKRGKGKAVRVVDLYI
Ga0182034_108223671	3300016371	Soil	KSGFEFQWVKLPLRWIRILHQAAVSPSTYDLAHTILVESFKLEQMAVRQIVLSAHVTGLSKQARIRAINNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0182034_116255611	3300016371	Soil	QDKELRALMRRRGAPRSETKKRKKSGFEVKWVKLPFRWIERLRGARGPTYDLAYTVLVENYKLDQMAVKEIVLSEQVTGLSRHIRQRAINNLVKRGLIRVRRGKGKAVRVVDLYI
Ga0182040_119392221	3300016387	Soil	ISDFIIQDKELRALMRRRGAPRSETKKRKKSGFEVKWVKLPFRWIERLRGARGPTYDLAYTVLVENYKLDQMAVKEIVLSEQVTGLSRHIRQRAINNLVKRGLIRVRRGKGKAVRVVDLY
Ga0182037_111389402	3300016404	Soil	MKKMGTQRSKAKTRRKSGFEVRWVKLPFRWIRILREAGVGRGTHHLALTILVENYKLEQMAVKEIILSEQVTGLSRRIRQRAINNLVRLKLIKVKRGKGKAV
Ga0182037_115680241	3300016404	Soil	QRSKAKRQKKSGFEVEWVKLPFRWIRILHQAAVSPSTYDLALTILVESFKLDQMAVKEIVLSEQVTGLSRRIRQRAISNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0182037_119303681	3300016404	Soil	MPISDFVIQDKELRALMKKMGAQRLKAKTQKRSKFEVQWVKLPLRWIRILHQAAVSSSTYDLAHTILVESFKLEQMAVKEIVLSAHVTGLSKHARTQAINNLVRLRLIKVKR
Ga0182039_118262832	3300016422	Soil	TRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGKGKAVRVVDLYI
Ga0182038_104839171	3300016445	Soil	KELRALMRRMGAQRSSVKARQKSGFKIQWIKLPLRWIRVLREAGVGRGTYDLALTILVENFKLEQMVVKEIVLSAEVTGLSRGGRREAVNNLVRLNLIKIKRGRGKAVRVVDVYI
Ga0182038_109100431	3300016445	Soil	MGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEIVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI
Ga0126371_102588462	3300021560	Tropical Forest Soil	MPISDFIIQGKEMRALMKKMGAQRSKAKTWKKSRFEVQWVKLPLRWIRILHQTAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI
Ga0126371_135389891	3300021560	Tropical Forest Soil	ELRALMRRMGAQRSSVKARQKSGFKIQWIKLPLRWIKVLREAGVGRGTYDLALTILVENFKLEQMVVKEIVLSAEVTGLSRGGRREAVNNLVRLNLIKIKRGRGKAVRVVDLYI
Ga0318516_103379982	3300031543	Soil	MQISDFLIQGRELRALMKRMEARRSKMKTRKKSGFEVRWVRLPLRWIRILHQAAVSASTYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRGKGKAVRVVDLYI
Ga0318534_105251581	3300031544	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI
Ga0318541_100207934	3300031545	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGKGKAVRVVDL
Ga0318541_102144412	3300031545	Soil	MKKMGTQRSKAKTRRKSGFEVRWVKLPFRWIRILREAGVGRGTHHLALTILVENYKLEQMAVKEIILSEQVTGLSRRIRQRAINNLVRLKLIKVKRGKGKAVRVVDLYI
Ga0318538_100791441	3300031546	Soil	MPISDFIIQGKEMRALMKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGKGKAVRVVDLYI
Ga0318573_101759822	3300031564	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGK
Ga0318515_101561583	3300031572	Soil	MGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAVRVIDLYI
Ga0310915_100088748	3300031573	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRG
Ga0318555_103048681	3300031640	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGKGKAVRVVDLYI
Ga0318542_104119571	3300031668	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVD
Ga0318561_100412502	3300031679	Soil	MPISDFIIQGKEMRALMKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI
Ga0318561_103771361	3300031679	Soil	VQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAVRVIDLYI
Ga0318561_105215171	3300031679	Soil	MRKMRTRRSVKTPRKSGFKAQWVKLPLRWIRILREAAAPGSTYDLAFTILVENFKLEQMAVKEIVLSAEVTGLPRMSRIRAINDLVRLKGTSN
Ga0318574_104120752	3300031680	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGKGK
Ga0318560_104407212	3300031682	Soil	MKKMGSPRLKTKKRKKSGFEFQWVKLPLRWIRILHQAAVSPSTYDLAHTILVESFKLEQMAVRQIVLSAHVTGLSKQARIRAINNLVRLRLIKVKRGKGK
Ga0318560_105287321	3300031682	Soil	SSTNASARMECGIGTGLWHWLRRRKMPISDFIIQGKEMRALMKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI
Ga0306917_113817061	3300031719	Soil	MPISDFIIRGKEARALMKKMGSPRLKTKKRKKSGFEFQWVKLPLRWIRILHQAAVSPSTYDLAHTILVESFKLEQMAVRQIVLSAHVTGLSKQARIRAINNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0318500_104206501	3300031724	Soil	SDFLIQGRELRALMKRMEARRSKMKTRKKSGFEVRWVRLPLRWIRILHQAAVSASIYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRERERL
Ga0306918_104514252	3300031744	Soil	MPISDFIIQDKELRALMRRRGAPRSETKKRKKSGFEVKWVKLPFRWIERLRGARGPTYDLAYTVLVENYKLDQMAVKEIVLSEQVTGLSRHIRQRAINNLVKRGLIRVRRGKGKAVRVVDLYI
Ga0306918_115230741	3300031744	Soil	RMECGTGIGSWHSLRRLRMPISDFIIRGKEARALMKKMGSPRLKTKKRKKSGFEFQWVKLPLRWIRILHQAAVSPSTYDLAHTILVESFKLEQMAVRQIVLSAHVTGLSKQARIRAINNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0318494_109301831	3300031751	Soil	MPISDFIIQGKDLQALMKKMGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAV
Ga0318554_105647362	3300031765	Soil	DLQALMKQMGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAVRVIDLYI
Ga0318509_107365141	3300031768	Soil	MPISDFIIQGKDLQALMKKMGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAVR
Ga0318543_101210411	3300031777	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGKGKAVR
Ga0318498_105064821	3300031778	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGKGKAVRVVD
Ga0318547_102680852	3300031781	Soil	MGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAVRVID
Ga0318552_106872601	3300031782	Soil	MPISDFIIQGKDLQALMKKMGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAVRVIDLYI
Ga0318503_100152982	3300031794	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVERGKGKAVRVVDLYI
Ga0318503_100958331	3300031794	Soil	RSKMKTRKKSGFEVRWVRLPLRWIRILHQAAVSASTYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRERERL
Ga0318557_103766862	3300031795	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKRGR
Ga0318550_100076804	3300031797	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMAVKEVILSAGVTGLSPHARERAINNLIRLKLIKVKRGKGKAVRVIDLYI
Ga0318550_101166882	3300031797	Soil	MKKMGTRRSVKTQQKSGFKVQWVKFPFRWISILREVAATGSTYNLALTILVESFKLEQMAVKEIILSAEVTGLPRMSRTRAINNLVRLNLIKIRRGKGKAVRVIDLYI
Ga0318497_104335882	3300031805	Soil	MGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAVRV
Ga0318511_104689801	3300031845	Soil	MPISDFIIQGKEARALMKRMGARRSKAKTRKKSRFEVRWVKLPFRWVRILHEAVVSASTHDLAHTILVESYKLEQMAVKEVVLSAHVTGLSKQARIRAINNLVRLKLIKVKWGKGKAVRVIDLYI
Ga0306925_101573743	3300031890	Soil	MRRRGAPRSETKKRKKSGFEVKWVKLPFRWIERLRGARGPTYDLAYTVLVENYKLDQMAVKEIVLSEQVTGLSRHIRQRAINNLVKRGLIRVRRGKGKAVRVVDLYI
Ga0306925_118230101	3300031890	Soil	MPGSDFIIQGKELRALMEKMRAQRSKAKRQKKSGFEVEWVKLPFRWIRILHQAAVSPSTYDLALTILVESFKLDQMAVKEIVLSEQVTGLSPRIRQRAISNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0318551_103721681	3300031896	Soil	MGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRG
Ga0306923_100995285	3300031910	Soil	MKKMGSPRLKTKKRKKSGFEFQWVKLPLRWIRILHQAAVSPSTYDLAHTILVESFKLEQMAVRQIVLSAHVTGLSKQARIRAINNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0306923_121091421	3300031910	Soil	VQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMAVKEVILSAGVTGLSPHARERAINNLIRLKLIKVKRGKGKAVRVIDLYI
Ga0310912_102428251	3300031941	Soil	LRMPISDFIIQGKEARALMKRMGARRSKAKTRKKSRFEVRWVKLPFRWVRILHEAVVSASTHDLAHTILVESYKLEQMAVKEVVLSAHVTGLSKQARIRAINNLVRLKLIKVKWGKGKAVRVIDLYI
Ga0310909_106076112	3300031947	Soil	MKKMGSPRLKTKKRKKSGFEFQWVKLPLRWIRILHQAAVSASTYDLAHTILVESFKLEQMAVKEIVLSAHVTGLSKQARIRAINNLVRLRLIKVKWGKGKAVRVIDLYI
Ga0310909_108443131	3300031947	Soil	LMEKMRAQRSKAKRQKKSGFEVEWVKLPFRWIRILHQAAVSPSTYDLALTILVESFKLDQMAVKEIVLSEQVTGLSRRIRQRAISNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0306926_103155041	3300031954	Soil	MPVSDFIIQGKELRALMEKMRAQRSKAKRQKKSGFEVEWVKLPFRWIRILHQAAVSPSTYDLALTILVESFKLDQMAVKEIVLSEQVTGLSRRIRQRAISNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0306926_107834701	3300031954	Soil	RASDFVIQGKELRALMRRMGAQRSSVKARQKSGFKIQWIKLPLRWIRVLREAGVGRGTYDLALTILVENFKLEQMVVKEIVLSAEVTGLSRGGRREAVNNLVRLNLIKIKRGRGKAVRVVDLYI
Ga0306922_114788912	3300032001	Soil	MPGSDFIIQGKELRALMEKMRAQRSKAKRQKKSGFEVEWVKLPFRWIRILHQAAVSPSTYDLALTILVESFKLDQMAVKEIVLSEQVTGLSRRIRQRAISNLVRLRLIKVKRGKGKAVRVVDLYI
Ga0306922_118719821	3300032001	Soil	FIIQGKEMRALTKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMAVKEVILSAGVTGLSPHARERAINNLIRLKLIKVKRGKGKAVRVIDLYI
Ga0310911_107530381	3300032035	Soil	RLTVHTSDFVIQGKELRALMKKMGTRRSVKTQQKSGFKVQWVKFPFRWISILREVAATGSTYNLALTILVESFKLEQMAVKEIILSAEVTGLPRMSRMRAINNLVRLNLIKIRRGKGKAVRVIDLYI
Ga0318549_100413234	3300032041	Soil	LIQGRELRALMKRMEARRSKMKTRKKSGFEVRWVRLPLRWIRILHQAAVSASTYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRGKGKAVRVVDLYI
Ga0318556_107582901	3300032043	Soil	RELRALMKRMEARRSKMKTRKKSGFEVRWVRLPLRWIRILHQAAVSASTYDLALTILVESFKREQMAVKEIILSEGVTGMSPTVRRKAISNLVRLNLIKVKRGKGKAVRVVDLYI
Ga0318558_104058242	3300032044	Soil	MKKMGTQRSKAKTRRKSGFEVRWVKLPFRWIRILREAGVGRGTHHLALTILVENYKLEQMAVKEIILSEQVTGLSRRIRQRAINNLVRLKLIKVKRGKGKAVR
Ga0318533_101821593	3300032059	Soil	MQVSDFLIQGKEMRSLMKKMGTQRSKAKTRRKSGFEVRWVKLPFRWIRILREAGVGRGTHHLALTILVENYKLEQMAVKEIILSEQVTGLSRRIRQRAINNLVRLKLIKVKRGKGKAVRVVDLYI
Ga0318510_104257731	3300032064	Soil	MPISDFIIQDKELRALMRRRGAPRSKTKKRKKSGFEFQWVKLPLRWIRILHQAAVSASTHDLAHTILVESFRLEQMAVKEVVLSAGVTGLSQHARERAINNLVRLKLIKVKRGRGKAVRVVDLYI
Ga0318514_100092743	3300032066	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEIVLSAGVTGLSQHARERAINNLVRLNLIKVKRGRGKAVRVVDLYI
Ga0306924_125514771	3300032076	Soil	MGVQRSKAKTQKRSKFEVQWVKLPLRWIRILHQAAVSPSTYDLAHTILVESFKLEQMAVKEIVLSAHVTGLSKHARTQAINNLVRLRLIKVKRGKGKAVRVVDL
Ga0318518_102608122	3300032090	Soil	MKKMGAQRSKAKTRKKSRFEVQWVKLPLRWIRILHQAAVSASTYDLALTILVESFKLEQMATKEVVLSAGVTGLSQHARERAINNLVRLNLIKVKQG
Ga0318518_104857721	3300032090	Soil	MGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVGRGTHHLALTILVENYKLEQMAVKEIILSEQVTGLSRRIRQRAINNLVRLKLIKVKRGKGKAVRVVDLYI
Ga0318540_103950672	3300032094	Soil	PISDFIIQGKDLQALMKKMGVQRSKAKRRKKSGFEVEWVKLPFRWIRILREAGVRRRTYDLAHTILVENYKLEQMAIKEIVLSEEVTQLPKDARKRAVDNLVRLKLINVKRGRGKAVRVIDLYI
Ga0306920_1015525322	3300032261	Soil	KMGTRRSVKTQQKSGFKVQWVKFPFRWISILREVAATGSTYNLALTILVESFKLEQMAVKEIILSAEVTGLPRMSRTRAINNLVRLNLIKIRRGKGKAVRVIDLYI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102274

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences