Metagenome / Metatranscriptome Family F102270

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102270
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	56 residues
Representative Sequence	ETYLVTRVYTEALSTIVVLRKSGAEEESQMRVKVERTSDGQNIPGFAPAMEDDSF
Number of Associated Samples	79
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.00 %
% of genes near scaffold ends (potentially truncated)	82.18 %
% of genes from short scaffolds (< 2000 bps)	85.15 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.119 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.752 % of family members)
Environment Ontology (ENVO)	Unclassified (33.663 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.436 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 28.92% Coil/Unstructured: 71.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02585	PIG-L	24.75
PF01435	Peptidase_M48	2.97
PF13561	adh_short_C2	1.98
PF02583	Trns_repr_metal	1.98
PF00293	NUDIX	1.98
PF02517	Rce1-like	1.98
PF13411	MerR_1	1.98
PF00456	Transketolase_N	0.99
PF13557	Phenol_MetA_deg	0.99
PF02371	Transposase_20	0.99
PF07238	PilZ	0.99
PF03349	Toluene_X	0.99
PF05598	DUF772	0.99
PF00144	Beta-lactamase	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	24.75
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.98
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	1.98
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.98
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.99
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.99
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG2067	Long-chain fatty acid transport protein	Lipid transport and metabolism [I]	0.99
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.99
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.99
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.12 %
Unclassified	root	N/A	11.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.12 %
Unclassified	root	N/A	11.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.12 %
Unclassified	root	N/A	11.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.34 %
Unclassified	root	N/A	11.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	35.64 %
Unclassified	root	N/A	11.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.94 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.64 %
Unclassified	root	N/A	11.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	35.64 %
Unclassified	root	N/A	11.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003219\|JGI26341J46601_10109471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	798	Open in IMG/M
3300004082\|Ga0062384_100582753	Not Available	755	Open in IMG/M
3300004091\|Ga0062387_100554103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300004091\|Ga0062387_100610748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300005332\|Ga0066388_105820041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300006059\|Ga0075017_101618720	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300010048\|Ga0126373_11178350	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300010048\|Ga0126373_11397820	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300010048\|Ga0126373_11538486	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300010048\|Ga0126373_12419477	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300010048\|Ga0126373_12478228	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300010048\|Ga0126373_12681619	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300010154\|Ga0127503_10358254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300010341\|Ga0074045_10168297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1481	Open in IMG/M
3300010341\|Ga0074045_10830278	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300010343\|Ga0074044_10142369	Not Available	1606	Open in IMG/M
3300010359\|Ga0126376_12009717	Not Available	620	Open in IMG/M
3300010362\|Ga0126377_12609134	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300010376\|Ga0126381_103940459	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300010376\|Ga0126381_103954973	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300010376\|Ga0126381_104239753	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012918\|Ga0137396_10262085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300012927\|Ga0137416_10335310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1264	Open in IMG/M
3300012955\|Ga0164298_11163444	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300014155\|Ga0181524_10062986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2258	Open in IMG/M
3300014491\|Ga0182014_10460652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300014657\|Ga0181522_10366231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300015054\|Ga0137420_1014617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300016270\|Ga0182036_10904533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300016319\|Ga0182033_12136656	Not Available	511	Open in IMG/M
3300016341\|Ga0182035_10204089	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300016341\|Ga0182035_11936534	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300016404\|Ga0182037_11780460	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300016422\|Ga0182039_11231274	Not Available	677	Open in IMG/M
3300017933\|Ga0187801_10018930	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300017943\|Ga0187819_10022533	All Organisms → cellular organisms → Bacteria	3674	Open in IMG/M
3300017943\|Ga0187819_10203170	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300017955\|Ga0187817_10069769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2185	Open in IMG/M
3300017955\|Ga0187817_10482797	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300017966\|Ga0187776_10022778	All Organisms → cellular organisms → Bacteria	3441	Open in IMG/M
3300017970\|Ga0187783_10833454	Not Available	665	Open in IMG/M
3300017972\|Ga0187781_11383647	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300017995\|Ga0187816_10340194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300018012\|Ga0187810_10287846	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300018058\|Ga0187766_10288155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300018085\|Ga0187772_10242435	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300018088\|Ga0187771_10041366	All Organisms → cellular organisms → Bacteria	3556	Open in IMG/M
3300018088\|Ga0187771_10104712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2284	Open in IMG/M
3300018088\|Ga0187771_10176022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1769	Open in IMG/M
3300020580\|Ga0210403_10019446	All Organisms → cellular organisms → Bacteria → Acidobacteria	5423	Open in IMG/M
3300020580\|Ga0210403_11214350	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300021402\|Ga0210385_10014215	All Organisms → cellular organisms → Bacteria	4922	Open in IMG/M
3300021560\|Ga0126371_10181007	All Organisms → cellular organisms → Bacteria	2192	Open in IMG/M
3300021560\|Ga0126371_12733074	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300025469\|Ga0208687_1077401	Not Available	741	Open in IMG/M
3300025474\|Ga0208479_1001572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4501	Open in IMG/M
3300026823\|Ga0207759_119781	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300026941\|Ga0207741_1004022	Not Available	1823	Open in IMG/M
3300027023\|Ga0207736_104654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300027042\|Ga0207766_1040479	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300027641\|Ga0208827_1164330	Not Available	609	Open in IMG/M
3300027812\|Ga0209656_10384265	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300027905\|Ga0209415_10764979	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300029910\|Ga0311369_10868523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300031543\|Ga0318516_10440951	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300031561\|Ga0318528_10133928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300031640\|Ga0318555_10801701	Not Available	508	Open in IMG/M
3300031668\|Ga0318542_10477076	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300031680\|Ga0318574_10343279	Not Available	870	Open in IMG/M
3300031719\|Ga0306917_10290186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1261	Open in IMG/M
3300031768\|Ga0318509_10843761	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031771\|Ga0318546_10367171	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300031821\|Ga0318567_10131156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1376	Open in IMG/M
3300031833\|Ga0310917_10362274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300031833\|Ga0310917_10897291	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031890\|Ga0306925_10608180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300031896\|Ga0318551_10733815	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031897\|Ga0318520_10398239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300031945\|Ga0310913_10257188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300031945\|Ga0310913_10712425	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300031946\|Ga0310910_10332664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300031947\|Ga0310909_11406501	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300031981\|Ga0318531_10111781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300032035\|Ga0310911_10540600	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300032039\|Ga0318559_10302746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300032051\|Ga0318532_10360371	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300032054\|Ga0318570_10201731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300032063\|Ga0318504_10443837	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300032076\|Ga0306924_11228214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300032261\|Ga0306920_100098689	All Organisms → cellular organisms → Bacteria	4323	Open in IMG/M
3300032261\|Ga0306920_101220794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1085	Open in IMG/M
3300032261\|Ga0306920_102245602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300032783\|Ga0335079_11032049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300032783\|Ga0335079_11696446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300032805\|Ga0335078_10013859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11947	Open in IMG/M
3300032805\|Ga0335078_11054864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300032828\|Ga0335080_12289013	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300032955\|Ga0335076_10734377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300033402\|Ga0326728_11063473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300033405\|Ga0326727_10164572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.17%
Aquatic	Environmental → Aquatic	16.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.20%
Freshwater	Environmental → Aquatic → Freshwater	15.84%
Peat	Environmental → Terrestrial → Peat	2.97%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.85%
Loam	Environmental → Terrestrial → Soil → Loam	4.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.82%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.93%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.99%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.99%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.99%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027023	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 1 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26341J46601_101094712	3300003219	Bog Forest Soil	LVTRVYNEALSSIAVLRKSGAEGEDLVRVKVERTPEGQGLPGFVPAVDDD*
Ga0062384_1005827533	3300004082	Bog Forest Soil	MSVSKIQSGQLWKKNESGEIYLVTRVYTEALSTVAMLRKSGAETEPLIRVRVERTARGQNIP
Ga0062387_1005541032	3300004091	Bog Forest Soil	TMVVLRKSGAEDQSLIRLRVEGTATGQNIPGFTPALDDDAG*
Ga0062387_1006107481	3300004091	Bog Forest Soil	WKNLESGDTFLVTRVYTEALSTIVVLRKSGAEDQSQLRIKVERTPEGQNIPGFAPAMEDDSV*
Ga0066388_1058200411	3300005332	Tropical Forest Soil	YTEALSTIVVLRKPGAEDQSLVRVEVERTSGGQNIPGFAPAMDDDSG*
Ga0075017_1016187202	3300006059	Watersheds	LWKKEDTGDIFLVTRVYSEALSTIVVLRKSGAEEENVTRVKVERTPQGHNLPGFVPAVDDDSV*
Ga0126373_111783501	3300010048	Tropical Forest Soil	VYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF*
Ga0126373_113978202	3300010048	Tropical Forest Soil	WKRDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF*
Ga0126373_115384862	3300010048	Tropical Forest Soil	VLRKSGAEEESQIRLRVERTSEGQNIPGFVPATEDDAF*
Ga0126373_124194771	3300010048	Tropical Forest Soil	TIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF*
Ga0126373_124782283	3300010048	Tropical Forest Soil	EALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF*
Ga0126373_126816192	3300010048	Tropical Forest Soil	VTRVYTEALSTIVVLRKSGAEEESQMRVKVERTSDGQNIPGFAPAMEDDSF*
Ga0127503_103582541	3300010154	Soil	LVTRIYTEALSTIALLRKSGAEDQDLIRVRVERNPSGQSLPGFIPAVEDDSI*
Ga0074046_104474841	3300010339	Bog Forest Soil	YNEALSTIAVLRKSGSENENQLRIKVERTPAGQNLPGFSPAMEDDIV*
Ga0074045_101682973	3300010341	Bog Forest Soil	MSVRKLQIGQLWKKEDNGEIYLVTRVYSEALSTIAVLRKSGAEEENVTRVKVERTGRGQGLPGFVPAVDDDSM*
Ga0074045_108302782	3300010341	Bog Forest Soil	EALSTIVVLRKSGSENENQLRIKVERTPTGLTIPGFSPAMEDDIV*
Ga0074044_101423691	3300010343	Bog Forest Soil	LRKSGAEDEHQIRLKVERTPQGQGIPGFAPAMEDDSQ*
Ga0126376_120097172	3300010359	Tropical Forest Soil	MANSVSRIQIGQLWKKDETGETYLVTGVYSEALSTVATLRKSGAENEALVRVKVERAAGGQTLPGFSPAQEDDF*
Ga0126377_126091342	3300010362	Tropical Forest Soil	VTRVYTEALSTIAVLRKSGAEDQHLVRVKVERTPQGQGLPGFVPAVEDD*
Ga0126381_1039404592	3300010376	Tropical Forest Soil	QIGQLWKNLETGETYLVTRVYTEALSTIVVLRKSGAEDQSQVRVKVERTSGGQNIPGFAPAMDDDSG*
Ga0126381_1039549732	3300010376	Tropical Forest Soil	QIGQLWKNLETGETYLVTRVYTEALSTIVVLRKSGAEDQSLVRVKVERTSGGQNIPGFAPAMDDDSG*
Ga0126381_1042397532	3300010376	Tropical Forest Soil	LWKRDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFVPAMEDDSF*
Ga0137396_102620854	3300012918	Vadose Zone Soil	WKKKETGDTFLVTRVYHEALSTIVVLRKSGSEGEDLVRVKVERTPQGQGLPGFVPAVEDDTL*
Ga0137416_103353103	3300012927	Vadose Zone Soil	QIGQLWKKKETGDTFLVTRVYHEALSTIVVLRKSGSEGEDLVRVKVERTPQGQGLPGFVPAVEDDSL*
Ga0164298_111634441	3300012955	Soil	IQIGQLWKKEASGETYLVTRVYTEALSTIVVLRKSGSEGEALTRVKADRTGGGSALPGFVPAQEDERF*
Ga0181524_100629864	3300014155	Bog	RKSGSENENQLRIKVERTPDGQNLPGFSPAMEDDIV*
Ga0182014_104606522	3300014491	Bog	LRKSGAESQSQLRIKIERTPEGQNLPGFKPASVDDSV*
Ga0181522_103662311	3300014657	Bog	KNDSGEIYLVTRVYTEALSSVAMLRKSGAETEPLIRVRVERTSGGQNIPGFTPAQEDEKF
Ga0137420_10146171	3300015054	Vadose Zone Soil	IQIGQLWKKKETGDTFLVTRVYHEALSTIVVLRKSGSEGEDLVRVKVERTPQGQGLPGFVPAVEDDTL*
Ga0182036_109045332	3300016270	Soil	YTEALSTIVVLRKSGAEEESQIRVKVERTSEGQNIPGFVPAMEDDSF
Ga0182033_121366563	3300016319	Soil	GQLWKKNGTGETYLVTRVYTEALSTIAVLRKSGAEDQNLVRVKVERTAQGQGLPGFVPAVEDD
Ga0182035_102040891	3300016341	Soil	QLWKKDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQIRLKVERTSEGQNIPGFVPATEDDAF
Ga0182035_119365341	3300016341	Soil	VYTEALSTIVVLRKSGAEEESQMRVKVERTSDGQNIPGFAPAMEDDSF
Ga0182037_117804601	3300016404	Soil	YTEALSTIVVLRKSGAEEESQMRVKVERTSDGQNIPGFAPAMEDDSF
Ga0182039_112312742	3300016422	Soil	VYTEALSTIAVLRRSGAEEESQIRVKVERTSDGQNIPGFAPAMEDDSF
Ga0187801_100189303	3300017933	Freshwater Sediment	MSVKRIQIGQLWKQLETGETYLVTRVYTEALSTIVVLRKSGAEDQSQLRVKVERTPAGPNIPGFTPAMEDDSV
Ga0187819_100225333	3300017943	Freshwater Sediment	MSVKRIQIGQLWKKLETGETYLVTRVYTEALSTMVVLRKSGQEDQSQVRVKVERSGAGQNIPGFAPAMEDDSV
Ga0187819_102031701	3300017943	Freshwater Sediment	LESGETFLVTRVYTEALSTIVVLRKSGAEDQSQLRIKIERTPEGQNIPGFAPAMEDDSV
Ga0187817_100697692	3300017955	Freshwater Sediment	MTARRIQIGQLWKNLATEETYLVTRVYTEALSTIVVLRKSGAEDQSQIRLKVERTSAGQNIPGFVPAMEDDSV
Ga0187817_104827971	3300017955	Freshwater Sediment	ESGETFLVTRVYTEALSTIVVLRKSGAEDQSQLRIKIERTPEGQNIPGFAPAMEDDSV
Ga0187776_100227784	3300017966	Tropical Peatland	LDTGETFLVTRVYPEALSTFVVLRKSGAEDQSQVRVKVERTPAGQNIPGFAPAMEDDSV
Ga0187783_108334541	3300017970	Tropical Peatland	MSAKKVQIGQLWKNLETGDTFLVTRVYTEALSTIVVLRKSGAEDQQQIRLKVERTPEGQNIPGFMPALQDDTA
Ga0187781_113836471	3300017972	Tropical Peatland	ETGETYLVTRVYTEALSTIVVLRKSGAEDESQLRLKVERTPAGSTIPGFAPAMDDDAV
Ga0187816_103401942	3300017995	Freshwater Sediment	LETGETYLVTRVYTEALRTMVILRKSGQEDQSQVRVKVERAGSGQSIPGFAPAMEDDSL
Ga0187810_102878461	3300018012	Freshwater Sediment	MTARRIQIGQLWKNLATEETYLVTRVYTEALSTIVVLRKSGAEDQSQIRLKIERTSAGQNIPGFVPAMEDDSV
Ga0187766_102881552	3300018058	Tropical Peatland	GETYLVTRVYTEALSTIAVLRKSGAENQDLVRVKVERTPQGQGLPGFVPAVEDD
Ga0187772_102424353	3300018085	Tropical Peatland	AVLRKSGAEDQSQLRIKVERRGGIPSIPGFTPAMDEDDSV
Ga0187771_100413662	3300018088	Tropical Peatland	MSVKRIRIGQLWKKLDSGETYLVTRVYTEALSTIVVLRKSGAEEQSQLRIKVERTNGGQVIPGFALAMEDDNL
Ga0187771_101047122	3300018088	Tropical Peatland	MASMSVKRIQIGQLWKQLETGETYLVTRVYTEALSTIVVLRKSGAEDQSQLRVKVERTPDGPNIPGFSPAMEDDSI
Ga0187771_101760223	3300018088	Tropical Peatland	MSVKRIQIGQLWKQLETGETYLVTRVYTEALSTIVVLRKSGAEEQSQLRVKVERTPAGPNIPGFAPAMEDDSV
Ga0210403_100194462	3300020580	Soil	MSARKLQIGQLWKKKETGDTFLVTRVYTEALSTFVVLRKSGSEGESLVRVKVERTPEGQGLPGFVPAVEDDSV
Ga0210403_112143501	3300020580	Soil	LWKKAESGETYLVTRVYTEALSTMVVLRKSGAEDENQIRIKVERTGDGQNIPGFHPATDDDSV
Ga0210385_100142151	3300021402	Soil	RKSGAEDEHQLRIKVERTPQGQNIPGFAPAMDDDSM
Ga0126371_101810071	3300021560	Tropical Forest Soil	GQLWKNLETGETYLVTRVYTEALSTIVVLRKSGAEDQSQVRVKVERTSGGQNIPGFAPAMDDDSG
Ga0126371_127330743	3300021560	Tropical Forest Soil	GTGETYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0208687_10774011	3300025469	Peatland	KDGTAETYLVTRVYPEALSTIAVLRKSGSENENQLRVKVERTPAGQNLPGFSPAMEDDIV
Ga0208479_10015723	3300025474	Arctic Peat Soil	MSVRKLQIGQLWKKEDSGEIYLVTRVYSEALSTIAVLRKSGAEEESVTRVKVERTGKGQNLPGFTPAVDDDSV
Ga0207759_1197812	3300026823	Tropical Forest Soil	VYTEALSTIVVLRKSGAEEESQIRVKVERTSEGQNIPGFVPAMEDDSF
Ga0207741_10040223	3300026941	Tropical Forest Soil	LVTRVYTEALSTMVVLRKSGAEDQNLVRIKVESTGKGQNIPGFAPAMEDDSV
Ga0207736_1046541	3300027023	Tropical Forest Soil	RVYTEALSTIVVLRKSGAEEESQIRVKVERTSEGQNIPGFVPAMEDDSF
Ga0207766_10404791	3300027042	Tropical Forest Soil	RKSGAEEENLVRIKVERTAKGQNLPGFVPAVDDDSV
Ga0208827_11643302	3300027641	Peatlands Soil	IVVLRKSGAESEHQVRVKVERTPAGQNIPGFSPAMEDDIV
Ga0209656_103842651	3300027812	Bog Forest Soil	DGTADVFLVTRVYHEALTTIALLRKSGAEGENQVRVKVERSGAGFTLPGFVPALDDDSM
Ga0209415_107649792	3300027905	Peatlands Soil	MSVRRIQIGQLWKKEDTGETYLVTRIYEEALSTFALLRKSGAEDQDQVRVRVVRTAAGQSLTGFVLAMEDDSI
Ga0311369_108685231	3300029910	Palsa	GEIYLVTRVYTEALSSVAMLRKSGAETEPLIRVRVERTSGGQNIPGFTPAQEDEKF
Ga0318516_104409512	3300031543	Soil	TYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318528_101339282	3300031561	Soil	IQIGQLWKRDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318555_108017011	3300031640	Soil	YLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318542_104770761	3300031668	Soil	VYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318574_103432791	3300031680	Soil	GETFLVTRVYTEALSTMVVLRKSGAEDQNLVRIKIENTGKGQNIPGFAPAMEDDSL
Ga0306917_102901862	3300031719	Soil	CGARKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318509_108437612	3300031768	Soil	ALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318546_103671711	3300031771	Soil	LWKKDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQIRLKVERTSEGQNIPGFVPATEDDAF
Ga0318567_101311561	3300031821	Soil	IVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0310917_103622742	3300031833	Soil	KRDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDS
Ga0310917_108972911	3300031833	Soil	KRDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQMRVKVERTSDGQNIPGFAPAMEDDS
Ga0306925_106081802	3300031890	Soil	TIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318551_107338152	3300031896	Soil	DGTGETYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318520_103982392	3300031897	Soil	TIVVLRKSGAEEESQIRVKVERTSEGQNIPGFVPAMEDDSF
Ga0310913_102571882	3300031945	Soil	LRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0310913_107124252	3300031945	Soil	ETYLVTRVYTEALSTIVVLRKSGAEEESQMRVKVERTSDGQNIPGFAPAMEDDSF
Ga0310910_103326641	3300031946	Soil	TEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0310909_114065012	3300031947	Soil	ETYLVTRVYTEALSTIVVLRKSGAEEESQIRVKVERTSEGQNIPGFVPAMEDDPF
Ga0318531_101117812	3300031981	Soil	LWKRDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0310911_105406002	3300032035	Soil	KKDGTGETYLVTRVYTEALSTIAVLRKSGAEDQNLVRVKVERTPQGQGLPGFVPAVEDD
Ga0318559_103027461	3300032039	Soil	LWKKDGTGETYLVTRVYTEALSTIVVLRKSGAEEESQIRVKVERTSEGQNIPGFVPAMEDDSF
Ga0318532_103603712	3300032051	Soil	AVLRKSGAEEQNQIRVKVERTPEGQNIPGFAPALEDDSV
Ga0318570_102017312	3300032054	Soil	GETYLVTRVYTEALSTIVVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0318504_104438371	3300032063	Soil	VVLRKSGAEEESQMRIKVERTSDGQNIPGFAPAMEDDSF
Ga0306924_112282141	3300032076	Soil	STIAVLRKSGAEEQNQIRVKVERTPEGQNIPGFAPALEDDSV
Ga0306920_1000986896	3300032261	Soil	VTRVYTEALSTIVVLRKSGAEEQSQIRVKVERTSEGQNIPGFVPAMEDDSF
Ga0306920_1012207942	3300032261	Soil	TGETYLVTRVYTEALSTIVVLRKSGAEEESQMRVKVERTSDGQNIPGFAPAMEDDSF
Ga0306920_1022456022	3300032261	Soil	RVYTEALSTIAVLRKSGAEDQNLVRVKVERTPQGQGLPGFVPAVEDD
Ga0335079_110320491	3300032783	Soil	IQIGQLWKKLETGETYLVTRVYTEALSTMVILRKSGQEDQNQVRVKVERAGAGQSIPGFAPAMEDDSL
Ga0335079_116964462	3300032783	Soil	YLVTRIYTEALSTIALLRKSGAEDQDLIRVRVERTAIGQNLPGFVPAVEDDSI
Ga0335078_100138594	3300032805	Soil	MSVKRIQIGQLWKKLETGETYLVTRVYTEALSTMVILRKSGQEDQSQVRVKVERAGAGQSIPGFVPAMEDDSL
Ga0335078_110548641	3300032805	Soil	MSVKRIQIGQLWKKLETGETYLVTRVYTEALSTMVILRKSGQEDQNQIRVKVERAGAGQSIPGFAPAMEDDSL
Ga0335080_122890131	3300032828	Soil	STMVILRKSGQEDQNQVRVKVERAGAGQSIPGFAPAMEDDSL
Ga0335076_107343772	3300032955	Soil	VTRVYTEALSTMVILRKSGAEDESQLRLKVERTAEGQNIPGFTPAMEDDSV
Ga0326728_110634731	3300033402	Peat Soil	YTEALSTIAVLRKSGAEEQSQLRIKVERTPEGQNIPGFAPAMEDDSI
Ga0326727_101645722	3300033405	Peat Soil	MSVRKLQIGQLWKKEDNGEIYLVTRVYSEALSTIAVLRKSGAEEENVTRVKVERRGKGQGLPGFVPAVDDDSM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102270

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences