NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F102066

Metagenome Family F102066

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F102066
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 56 residues
Representative Sequence MDIILTVGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK
Number of Associated Samples 81
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 24.51 %
% of genes from short scaffolds (< 2000 bps) 80.39 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.353 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(26.471 % of family members)
Environment Ontology (ENVO) Unclassified
(85.294 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.118 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.36%    β-sheet: 0.00%    Coil/Unstructured: 44.64%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF08774VRR_NUC 13.73
PF00574CLP_protease 1.96
PF13730HTH_36 1.96
PF14090HTH_39 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 3.92
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 3.92
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.35 %
All OrganismsrootAll Organisms17.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10021919All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.3706Open in IMG/M
3300000115|DelMOSum2011_c10196878Not Available564Open in IMG/M
3300000115|DelMOSum2011_c10201171Not Available554Open in IMG/M
3300000117|DelMOWin2010_c10159481Not Available735Open in IMG/M
3300000117|DelMOWin2010_c10197138Not Available622Open in IMG/M
3300000149|LPaug09P1610mDRAFT_c1003210Not Available2575Open in IMG/M
3300001450|JGI24006J15134_10054451All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1614Open in IMG/M
3300001450|JGI24006J15134_10113716Not Available948Open in IMG/M
3300001472|JGI24004J15324_10057379Not Available1132Open in IMG/M
3300001472|JGI24004J15324_10063828Not Available1048Open in IMG/M
3300001846|ACM22_1081164All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1864Open in IMG/M
3300001963|GOS2229_1012870Not Available1808Open in IMG/M
3300002231|KVRMV2_100977980Not Available906Open in IMG/M
3300002483|JGI25132J35274_1123390Not Available517Open in IMG/M
3300003477|nap3_10037722Not Available1070Open in IMG/M
3300005590|Ga0070727_10851553Not Available512Open in IMG/M
3300006735|Ga0098038_1054980Not Available1431Open in IMG/M
3300006737|Ga0098037_1024161All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2260Open in IMG/M
3300006737|Ga0098037_1032130Not Available1931Open in IMG/M
3300006752|Ga0098048_1047863All Organisms → Viruses → Predicted Viral1350Open in IMG/M
3300006789|Ga0098054_1208530Not Available711Open in IMG/M
3300006793|Ga0098055_1111321All Organisms → Viruses → Predicted Viral1066Open in IMG/M
3300006793|Ga0098055_1151560Not Available892Open in IMG/M
3300006793|Ga0098055_1195934Not Available768Open in IMG/M
3300006793|Ga0098055_1303296Not Available596Open in IMG/M
3300006810|Ga0070754_10004858Not Available9126Open in IMG/M
3300006916|Ga0070750_10048722All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2058Open in IMG/M
3300006916|Ga0070750_10298338Not Available689Open in IMG/M
3300006919|Ga0070746_10518213Not Available521Open in IMG/M
3300006925|Ga0098050_1057838All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1014Open in IMG/M
3300006925|Ga0098050_1143901Not Available601Open in IMG/M
3300007539|Ga0099849_1328579Not Available547Open in IMG/M
3300009071|Ga0115566_10240248Not Available1089Open in IMG/M
3300009433|Ga0115545_1104007Not Available1025Open in IMG/M
3300010153|Ga0098059_1025015All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2430Open in IMG/M
3300010368|Ga0129324_10189709Not Available840Open in IMG/M
3300010430|Ga0118733_102819427Not Available957Open in IMG/M
3300012920|Ga0160423_10362251Not Available993Open in IMG/M
3300017706|Ga0181377_1031824Not Available1087Open in IMG/M
3300017706|Ga0181377_1063872Not Available679Open in IMG/M
3300017710|Ga0181403_1092793Not Available630Open in IMG/M
3300017714|Ga0181412_1013161Not Available2441Open in IMG/M
3300017714|Ga0181412_1040372Not Available1217Open in IMG/M
3300017720|Ga0181383_1056093Not Available1058Open in IMG/M
3300017726|Ga0181381_1051321Not Available905Open in IMG/M
3300017731|Ga0181416_1130003Not Available605Open in IMG/M
3300017735|Ga0181431_1098556Not Available656Open in IMG/M
3300017740|Ga0181418_1171321Not Available519Open in IMG/M
3300017743|Ga0181402_1123126Not Available663Open in IMG/M
3300017744|Ga0181397_1039307All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1335Open in IMG/M
3300017744|Ga0181397_1068613Not Available958Open in IMG/M
3300017746|Ga0181389_1167896Not Available577Open in IMG/M
3300017748|Ga0181393_1015542Not Available2266Open in IMG/M
3300017749|Ga0181392_1145699Not Available694Open in IMG/M
3300017753|Ga0181407_1044272All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1174Open in IMG/M
3300017755|Ga0181411_1119592Not Available770Open in IMG/M
3300017756|Ga0181382_1000882Not Available15155Open in IMG/M
3300017757|Ga0181420_1094683Not Available923Open in IMG/M
3300017759|Ga0181414_1186482Not Available538Open in IMG/M
3300017763|Ga0181410_1203097Not Available542Open in IMG/M
3300017767|Ga0181406_1042438All Organisms → Viruses → Predicted Viral1413Open in IMG/M
3300017770|Ga0187217_1303299Not Available514Open in IMG/M
3300017773|Ga0181386_1135590Not Available757Open in IMG/M
3300017776|Ga0181394_1174904Not Available661Open in IMG/M
3300017776|Ga0181394_1226649Not Available564Open in IMG/M
3300020385|Ga0211677_10021924Not Available3187Open in IMG/M
3300020385|Ga0211677_10118032Not Available1147Open in IMG/M
3300020388|Ga0211678_10332181Not Available614Open in IMG/M
3300020421|Ga0211653_10387364Not Available602Open in IMG/M
3300020438|Ga0211576_10375262Not Available730Open in IMG/M
3300020453|Ga0211550_10000512Not Available20515Open in IMG/M
3300020469|Ga0211577_10043176All Organisms → Viruses → Predicted Viral3336Open in IMG/M
3300020469|Ga0211577_10878980Not Available509Open in IMG/M
3300021371|Ga0213863_10246664Not Available766Open in IMG/M
3300021375|Ga0213869_10007692Not Available6671Open in IMG/M
3300021389|Ga0213868_10483300Not Available669Open in IMG/M
3300021957|Ga0222717_10037758All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3170Open in IMG/M
3300021957|Ga0222717_10242519Not Available1050Open in IMG/M
3300021957|Ga0222717_10339170Not Available847Open in IMG/M
3300021958|Ga0222718_10113209Not Available1581Open in IMG/M
3300021959|Ga0222716_10724245Not Available525Open in IMG/M
3300022053|Ga0212030_1054810Not Available567Open in IMG/M
3300022072|Ga0196889_1059223Not Available732Open in IMG/M
3300022187|Ga0196899_1148660Not Available653Open in IMG/M
(restricted) 3300023210|Ga0233412_10070344Not Available1443Open in IMG/M
(restricted) 3300024059|Ga0255040_10001377Not Available7042Open in IMG/M
3300025070|Ga0208667_1070362Not Available529Open in IMG/M
3300025084|Ga0208298_1003902All Organisms → Viruses → Predicted Viral4492Open in IMG/M
3300025084|Ga0208298_1042076Not Available917Open in IMG/M
3300025085|Ga0208792_1003316All Organisms → Viruses → Predicted Viral4437Open in IMG/M
3300025108|Ga0208793_1078924Not Available953Open in IMG/M
3300025137|Ga0209336_10018042Not Available2575Open in IMG/M
3300025138|Ga0209634_1072178All Organisms → Viruses → Predicted Viral1617Open in IMG/M
3300025168|Ga0209337_1000432Not Available33757Open in IMG/M
3300025508|Ga0208148_1111731Not Available574Open in IMG/M
3300025645|Ga0208643_1013924Not Available2975Open in IMG/M
3300025645|Ga0208643_1027167All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1927Open in IMG/M
3300025645|Ga0208643_1089899Not Available859Open in IMG/M
3300025759|Ga0208899_1206926Not Available619Open in IMG/M
3300025803|Ga0208425_1093640Not Available706Open in IMG/M
3300025881|Ga0209309_10386479Not Available606Open in IMG/M
3300032011|Ga0315316_10201772Not Available1660Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine26.47%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater25.49%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous13.73%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.84%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.90%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine4.90%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.94%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine2.94%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment1.96%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton0.98%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.98%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.98%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.98%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.98%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.98%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.98%
EstuarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine0.98%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.98%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000149Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 10mEnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001846Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM22, ROCA_DNA119_0.2um_25bEnvironmentalOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300003477Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3EnvironmentalOpen in IMG/M
3300005590Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2EnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006925Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017743Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017755Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300020388Marine microbial communities from Tara Oceans - TARA_B100001063 (ERX555965-ERR599064)EnvironmentalOpen in IMG/M
3300020421Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020453Marine microbial communities from Tara Oceans - TARA_B100001758 (ERX556003-ERR598963)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025137Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1002191993300000101MarineMDIILTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK*
DelMOSum2011_1019687813300000115MarineKKVKLKINKMDIILTVGLAIATYGFGFLSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINNN*
DelMOSum2011_1020117123300000115MarineMDIILTVGLALATYGFGFFSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK*
DelMOWin2010_1015948133300000117MarineMDFILTIILAIATYGFGFVSGVINTTETKETQEDNKPINEDRKEAFEFAFKNFINK*
DelMOWin2010_1019713833300000117MarineFILTIILAIATYGFGFVSGVINGTETKEIQEDNKPINEDRKEAFEFAFKNFINK*
LPaug09P1610mDRAFT_100321013300000149MarineMDIILTIGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKQAFEFAFKNFINK*
JGI24006J15134_1005445143300001450MarineMDIILTVGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK*
JGI24006J15134_1011371633300001450MarineMDIILTVGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKQAFEFAFKNFINK*
JGI24004J15324_1005737933300001472MarineMDIILTXGXAIATYGFGFFSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK*
JGI24004J15324_1006382823300001472MarineMDIILTXGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKEAFMFAFKNFINK*
ACM22_108116423300001846Marine PlanktonMEIILTIILAIVTYGFGFFSGVINNTQNDKTQTNKKPINKDRKEAFEFAFKDYINK*
GOS2229_101287043300001963MarineMDIILTVGLAIATYGFGFFSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNFINK*
KVRMV2_10097798013300002231Marine SedimentMDFILTIILAIATYGFGFVSGVINGTETKEIQEDNKPINEDRKEAFEFAFKNFINK*
JGI25132J35274_112339023300002483MarineMDFILTIILAIATYGFGFVSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK*
nap3_1003772233300003477EstuarineMDFILTIILAIATYGFGFVSGVINGTETKEIQEDNKPINEHRKEAFEFAFKNFINK*
Ga0070727_1085155333300005590Marine SedimentMDIILTVGLAIATYGFGFFSGVINSTETKEIQEDNKPINEDRKEAFEFAFKNYINNN*
Ga0098038_105498043300006735MarineMDIILTIGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNYINK*
Ga0098037_102416183300006737MarineMDIILTVGLAIATYGFGFFSGVLNSTETKEIQENNKPINEDRKEAFEFAFKNYINK*
Ga0098037_103213023300006737MarineMDIILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNYINK*
Ga0098048_104786323300006752MarineMDIILTVGLAIATYGFGFFSGVLNSTETNEIQENNKPINEDRKQAFEFAFKNFINK*
Ga0098054_120853033300006789MarineMDIILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNFINK*
Ga0098055_111132133300006793MarineMDIILTVGLAIATYGFGFFSGIINSTETKEIQENNKPINKDRKEAFEFAFKNFINK*
Ga0098055_115156023300006793MarineMDIILTVGLAIATYGFGFLSGVINTTETNEIQENNKPINEDRKEAFEFAFKNFINK*
Ga0098055_119593433300006793MarineGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNFINK*
Ga0098055_130329623300006793MarineMDIILTVGLAIATYGFGFFSGVLNSTETNEIQENNKPINEDRKQAFEFAFKNYINK*
Ga0070754_1000485883300006810AqueousMEIILTIILAIATYGFGFVSGVINNTQNNKTQTNEKPINQDRKEAFEFAFKNYINK*
Ga0070750_1004872213300006916AqueousMDIILTVGLAIATYGFGFFSGVINSSETKEIQENNKPINEDRKEAFEFAFKNFINK*
Ga0070750_1029833823300006916AqueousMDIILTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKQAFEFAFKNFINK*
Ga0070746_1051821313300006919AqueousKMDFILTIILAIATYGFGFVSGVINGTETKEIQEDNKPINEDRKEAFEFAFKNYINK*
Ga0098050_105783813300006925MarineMDIILTVGLAIATYGFGFFSGVINSTETNEIQENNKPINEDRKQAFEFAFKNFINK*
Ga0098050_114390113300006925MarineMDIILTVGLAIATYGFGFFSGVLNSTETNEIQENNKPINEDRKQAFEFAFKN
Ga0099849_132857933300007539AqueousMEIILTIILAIATYGFGFVSGFINNTENNKTQTNEKPINKDRKEAFEFAFKNYINK*
Ga0115566_1024024833300009071Pelagic MarineMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK*
Ga0115545_110400733300009433Pelagic MarineMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKQAFEFAFKNFINK*
Ga0098059_102501583300010153MarineMDIILTVGLAIATYGFGFLSGVINTTETKDIQENNKPINEDRKEAFEFAFKNFINK*
Ga0129324_1018970913300010368Freshwater To Marine Saline GradientMDFILTIILAIATYGFGFVSGVINTTETKETQEDNKPINEDRKEAFEFAF
Ga0118733_10281942713300010430Marine SedimentMDIILTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKEAFEFAFKNYINNN*
Ga0160423_1036225123300012920Surface SeawaterMETILIIALALITYGFGFVSGVINQTNTKETKEQKKPINKDRKEAFEFAFKNFINK*
Ga0181377_103182413300017706MarineTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0181377_106387213300017706MarineVKLKINKMDIILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNFINK
Ga0181403_109279323300017710SeawaterMDIILTIGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKQAFEFAFKKYINK
Ga0181412_101316113300017714SeawaterKINKMDIILTIGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0181412_104037213300017714SeawaterMDIILTVGLAIATYGFGFFSGVINSAETKEIQENNKPINKDRKEAFEFAFKNFINK
Ga0181383_105609333300017720SeawaterMDFILTIVLAIATYGFGFVSGVINGTETKEIQDKPTNEDRKEAFEFAFKNFINK
Ga0181381_105132143300017726SeawaterMDFILTIILAIATYGFGFFSGVINTTETKEIQEDNKPINEDRKQAFEFAFKNYINK
Ga0181416_113000333300017731SeawaterMICQNMCXRIIKKVKLKINKMDIILTIGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0181431_109855623300017735SeawaterMDIILTVGLAIATYGFGFFSGVLNSTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0181418_117132113300017740SeawaterAIATYGFGFFSGVINTTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0181402_112312623300017743SeawaterMDIILTVGLAIATYGFGFFSGVINSTETKEIQEDNKPINEDRKQAFEFAFKNYINK
Ga0181397_103930713300017744SeawaterMEIILTIVLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0181397_106861313300017744SeawaterIIKKVKLKINKIMDIILTVGLAIATYGFGFFSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNFINK
Ga0181389_116789633300017746SeawaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKQAFEFAFK
Ga0181393_101554263300017748SeawaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKQAFEFAFKNFINK
Ga0181392_114569933300017749SeawaterMDIILTIGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0181407_104427243300017753SeawaterMDIILTVGLAIATYGFGFFSGVLNSTETKEIQEDNKPINEDRKQAFEFAFKNYINK
Ga0181411_111959233300017755SeawaterMILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNFINK
Ga0181382_100088273300017756SeawaterMDFILTIILAIATYGFGFVSGVINGTETKEIQDKPTNEDRKEAFEFAFKNFINK
Ga0181420_109468323300017757SeawaterMEIILTIVLAIATYGFGFFSGVINTTETKEIQEDNKPINEDRKQAFEFAFKDYINK
Ga0181414_118648213300017759SeawaterKVKLKINKMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0181410_120309733300017763SeawaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKQAFEFAFKDYINK
Ga0181406_104243823300017767SeawaterMDFILTIILAIATYGFGFVSGVINGTETKEIQEDNKPINEDRKEAFEFAFKNFINK
Ga0187217_130329913300017770SeawaterINKIMDIILTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0181386_113559033300017773SeawaterMEIILTIVLAIATYGFGFFSGVINTTETKEIQDKPINEDRKEAFEFAFKNFINK
Ga0181394_117490413300017776SeawaterIILTIVLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0181394_122664913300017776SeawaterMDIILTVGLAIATYGFGFFSGVLNSTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0211677_1002192433300020385MarineMDIILTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0211677_1011803213300020385MarineMDIILTVGLAIATYGFGFFSGVLNSTETNEIQENNKPINEDRKEAFEFAFKNYINK
Ga0211678_1033218123300020388MarineMDIILTVGLALATYGFGFFSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0211653_1038736423300020421MarineMDFILTIILAIATYGFGFVSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0211576_1037526233300020438MarineMDIILTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0211550_10000512103300020453MarineMDFILTIILAIATYGFGFVSGVINGTETKEIQEDNKPINQDRKEAFEFAFKNYINK
Ga0211577_10043176103300020469MarineMDFILTIILAIATYGFGFVSGVINGTETKEIQDKPINEDRKEAFEFAFKNFINK
Ga0211577_1087898033300020469MarineMDIILTVGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKQAFEFAFKN
Ga0213863_1024666423300021371SeawaterMDFILTIILAIATYGFGFVSGVINGTETKEIQEDNKPINEDRKEAFEFAFKNYINK
Ga0213869_10007692203300021375SeawaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0213868_1048330023300021389SeawaterMDFILTIILAIATYGFGFVSGVINTTETKETQEDNKPINEDRKEAFEFAFKNFINK
Ga0222717_1003775843300021957Estuarine WaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0222717_1024251923300021957Estuarine WaterMDIILTIGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKQAFEFAFKNYINK
Ga0222717_1033917033300021957Estuarine WaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINKDRKEAFEFAFKNFINK
Ga0222718_1011320943300021958Estuarine WaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKQAFEFAFKNYIN
Ga0222716_1072424523300021959Estuarine WaterMDIILTIGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0212030_105481023300022053AqueousMEIILTIILAIATYGFGFVSGVINNTQNNKTQTNEKPINQDRKEAFEFAFKNYINK
Ga0196889_105922333300022072AqueousMDIILTVGLAIATYGFGFLSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0196899_114866013300022187AqueousMEIILTIILAIATYGFGFVSGVINNTQNNKTQTNEKPINQDRKEAFEFAFKNYI
(restricted) Ga0233412_1007034423300023210SeawaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKQAFEFAFKNYINK
(restricted) Ga0255040_1000137723300024059SeawaterMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKQAFEFAFKNFINK
Ga0208667_107036223300025070MarineMDIILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKEAFEFAFKNFINK
Ga0208298_100390273300025084MarineMDIILTVGLAIATYGFGFLSGVINSTETNEIQENNKPINEDRKQAFEFAFKNYINK
Ga0208298_104207633300025084MarineMDIILTVGLAIATYGFGFFSGIINSTETKEIQENNKPINKDRKEAFEFAFKNFINK
Ga0208792_100331653300025085MarineMDIILTVGLAIATYGFGFLSGVINSTETNEIQENNKPINEDRKQAFEFAFKNFINK
Ga0208793_107892433300025108MarineMDIILTVGLAIATYGFGFFSGVLNSTETNEIQENNKPINEDRKQAFEFAFKNYINK
Ga0209336_1001804213300025137MarineMDIILTIGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKQAFEFAFKNFINK
Ga0209634_107217863300025138MarineMDIILTVGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKQAFEFAFKNFINK
Ga0209337_1000432113300025168MarineMDIILTVGLAIATYGFGFFSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0208148_111173123300025508AqueousMDIILTVGLAIATYGFGFFTGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0208643_101392473300025645AqueousMDIILTVGLAIATYGFGFLSGVINSTETKEIQENNKPINEDRKEAFEFAFKNFINNN
Ga0208643_102716713300025645AqueousMDIILTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKEAFEFAFK
Ga0208643_108989923300025645AqueousIKKVKFKINKIMDIILTVGLAIATYGFGFFSGVINSSETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0208899_120692623300025759AqueousMDIILTVGLAIATYGFGFFSGVINSTETKEIQENNKPINEDRKQAFEFAFKNFINK
Ga0208425_109364033300025803AqueousMDFILTIILAIATYGFGFVSGVINTTETKETQEDNKPINEDRKEAFE
Ga0209309_1038647913300025881Pelagic MarineINKIMDIILTVGLAIATYGFGFLSGVINTTETKEIQENNKPINEDRKEAFEFAFKNFINK
Ga0315316_1020177253300032011SeawaterMDFILTVGLAIATYGFGFLSGVINTTETKEIQEDNKPINEDRKQAFEFAFKNYINK


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