Metagenome / Metatranscriptome Family F102012

Basic Information
Family ID	F102012
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	43 residues
Representative Sequence	MNRAATLALVLLALPLAAPAKDLIGVFEDAVHNDPVIRQADANR
Number of Associated Samples	95
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.12 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	87.25 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (65.686 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.157 % of family members)
Environment Ontology (ENVO)	Unclassified (38.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.039 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 48.61% β-sheet: 0.00% Coil/Unstructured: 51.39%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01135	PCMT	79.41
PF08448	PAS_4	10.78
PF00672	HAMP	1.96
PF01904	DUF72	0.98
PF13188	PAS_8	0.98
PF13426	PAS_9	0.98
PF03030	H_PPase	0.98
PF00990	GGDEF	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	79.41
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	79.41
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	79.41
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	79.41
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.98
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
All Organisms	root	All Organisms	34.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
cellular organisms	root	All Organisms → cellular organisms	34.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	6.86 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	6.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	6.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.69 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	6.86 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10322445	Not Available	958	Open in IMG/M
3300005175\|Ga0066673_10222301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1085	Open in IMG/M
3300005332\|Ga0066388_103138576	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300005363\|Ga0008090_10102522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1540	Open in IMG/M
3300005534\|Ga0070735_10067401	All Organisms → cellular organisms → Bacteria → Proteobacteria	2316	Open in IMG/M
3300005546\|Ga0070696_101084438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	672	Open in IMG/M
3300005561\|Ga0066699_10107973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1846	Open in IMG/M
3300005568\|Ga0066703_10377707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	850	Open in IMG/M
3300005591\|Ga0070761_10098487	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300005921\|Ga0070766_10517918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	794	Open in IMG/M
3300006032\|Ga0066696_10740501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	629	Open in IMG/M
3300006046\|Ga0066652_101557502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	610	Open in IMG/M
3300009012\|Ga0066710_103362382	Not Available	609	Open in IMG/M
3300009148\|Ga0105243_10395762	Not Available	1282	Open in IMG/M
3300009551\|Ga0105238_12489461	Not Available	553	Open in IMG/M
3300010048\|Ga0126373_12805615	Not Available	544	Open in IMG/M
3300010159\|Ga0099796_10012162	All Organisms → cellular organisms → Bacteria → Proteobacteria	2422	Open in IMG/M
3300010335\|Ga0134063_10208925	Not Available	920	Open in IMG/M
3300010361\|Ga0126378_12510623	Not Available	589	Open in IMG/M
3300010362\|Ga0126377_12538801	Not Available	588	Open in IMG/M
3300010376\|Ga0126381_103061450	Not Available	663	Open in IMG/M
3300010376\|Ga0126381_103286396	Not Available	638	Open in IMG/M
3300012189\|Ga0137388_10556172	Not Available	1067	Open in IMG/M
3300012203\|Ga0137399_10022852	All Organisms → cellular organisms → Bacteria → Proteobacteria	4141	Open in IMG/M
3300012206\|Ga0137380_10398026	Not Available	1223	Open in IMG/M
3300012351\|Ga0137386_11229952	Not Available	523	Open in IMG/M
3300012359\|Ga0137385_11495931	Not Available	539	Open in IMG/M
3300012927\|Ga0137416_11642971	Not Available	585	Open in IMG/M
3300012948\|Ga0126375_11794640	Not Available	535	Open in IMG/M
3300012986\|Ga0164304_10950953	Not Available	676	Open in IMG/M
3300012988\|Ga0164306_11536924	Not Available	572	Open in IMG/M
3300015241\|Ga0137418_11305524	Not Available	506	Open in IMG/M
3300016294\|Ga0182041_10627298	Not Available	947	Open in IMG/M
3300016387\|Ga0182040_11798052	Not Available	524	Open in IMG/M
3300016422\|Ga0182039_11820239	Not Available	558	Open in IMG/M
3300017970\|Ga0187783_10958569	Not Available	617	Open in IMG/M
3300017995\|Ga0187816_10465378	Not Available	567	Open in IMG/M
3300018062\|Ga0187784_10517363	Not Available	961	Open in IMG/M
3300018064\|Ga0187773_10244576	Not Available	977	Open in IMG/M
3300018085\|Ga0187772_10757573	Not Available	699	Open in IMG/M
3300018085\|Ga0187772_11211479	Not Available	556	Open in IMG/M
3300020170\|Ga0179594_10187813	Not Available	772	Open in IMG/M
3300020199\|Ga0179592_10034012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2302	Open in IMG/M
3300020583\|Ga0210401_10598600	Not Available	964	Open in IMG/M
3300021171\|Ga0210405_10241659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1429	Open in IMG/M
3300021171\|Ga0210405_11246745	Not Available	549	Open in IMG/M
3300021178\|Ga0210408_11244272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	567	Open in IMG/M
3300021372\|Ga0213877_10289112	Not Available	553	Open in IMG/M
3300021402\|Ga0210385_11059476	Not Available	623	Open in IMG/M
3300021432\|Ga0210384_10128972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2269	Open in IMG/M
3300021478\|Ga0210402_11245675	Not Available	671	Open in IMG/M
3300024179\|Ga0247695_1044320	Not Available	644	Open in IMG/M
3300026312\|Ga0209153_1059364	All Organisms → cellular organisms → Bacteria → Proteobacteria	1370	Open in IMG/M
3300026314\|Ga0209268_1013383	All Organisms → cellular organisms → Bacteria → Proteobacteria	3211	Open in IMG/M
3300026355\|Ga0257149_1059030	Not Available	558	Open in IMG/M
3300026514\|Ga0257168_1129054	Not Available	563	Open in IMG/M
3300026557\|Ga0179587_10062147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2178	Open in IMG/M
3300027575\|Ga0209525_1165198	Not Available	501	Open in IMG/M
3300027616\|Ga0209106_1023300	All Organisms → cellular organisms → Bacteria → Proteobacteria	1352	Open in IMG/M
3300027645\|Ga0209117_1053335	All Organisms → cellular organisms → Bacteria → Proteobacteria	1190	Open in IMG/M
3300027869\|Ga0209579_10258388	Not Available	936	Open in IMG/M
3300028047\|Ga0209526_10895361	Not Available	540	Open in IMG/M
3300031231\|Ga0170824_109558504	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031545\|Ga0318541_10046185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2220	Open in IMG/M
3300031546\|Ga0318538_10044680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2140	Open in IMG/M
3300031549\|Ga0318571_10048594	Not Available	1256	Open in IMG/M
3300031719\|Ga0306917_10706759	Not Available	792	Open in IMG/M
3300031720\|Ga0307469_10255967	All Organisms → cellular organisms → Bacteria → Proteobacteria	1412	Open in IMG/M
3300031747\|Ga0318502_10269198	Not Available	997	Open in IMG/M
3300031751\|Ga0318494_10296969	Not Available	931	Open in IMG/M
3300031764\|Ga0318535_10341197	Not Available	670	Open in IMG/M
3300031765\|Ga0318554_10245618	Not Available	1019	Open in IMG/M
3300031768\|Ga0318509_10248726	Not Available	993	Open in IMG/M
3300031769\|Ga0318526_10038413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1784	Open in IMG/M
3300031778\|Ga0318498_10340812	Not Available	670	Open in IMG/M
3300031782\|Ga0318552_10029378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2509	Open in IMG/M
3300031782\|Ga0318552_10036499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2280	Open in IMG/M
3300031792\|Ga0318529_10038133	All Organisms → cellular organisms → Bacteria → Proteobacteria	2027	Open in IMG/M
3300031821\|Ga0318567_10258642	Not Available	978	Open in IMG/M
3300031831\|Ga0318564_10042948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1956	Open in IMG/M
3300031845\|Ga0318511_10178559	Not Available	938	Open in IMG/M
3300031893\|Ga0318536_10068891	All Organisms → cellular organisms → Bacteria → Proteobacteria	1737	Open in IMG/M
3300031897\|Ga0318520_10552878	Not Available	713	Open in IMG/M
3300031912\|Ga0306921_10952055	Not Available	971	Open in IMG/M
3300031941\|Ga0310912_10825227	Not Available	716	Open in IMG/M
3300031941\|Ga0310912_11162544	Not Available	588	Open in IMG/M
3300031945\|Ga0310913_10424051	Not Available	944	Open in IMG/M
3300031946\|Ga0310910_10807200	Not Available	739	Open in IMG/M
3300032008\|Ga0318562_10113499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1545	Open in IMG/M
3300032008\|Ga0318562_10829664	Not Available	529	Open in IMG/M
3300032041\|Ga0318549_10368409	Not Available	647	Open in IMG/M
3300032043\|Ga0318556_10004266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	5381	Open in IMG/M
3300032052\|Ga0318506_10358875	Not Available	646	Open in IMG/M
3300032054\|Ga0318570_10471284	Not Available	573	Open in IMG/M
3300032064\|Ga0318510_10319901	Not Available	650	Open in IMG/M
3300032067\|Ga0318524_10794719	Not Available	500	Open in IMG/M
3300032076\|Ga0306924_10980357	Not Available	929	Open in IMG/M
3300032174\|Ga0307470_10777448	Not Available	739	Open in IMG/M
3300032205\|Ga0307472_100212348	All Organisms → cellular organisms → Bacteria → Proteobacteria	1483	Open in IMG/M
3300033289\|Ga0310914_11009851	Not Available	732	Open in IMG/M
3300033290\|Ga0318519_10656195	Not Available	640	Open in IMG/M
3300033290\|Ga0318519_10674475	Not Available	631	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.06%
Plants	Host-Associated → Plants	1.96%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.35%
Loam	Environmental → Terrestrial → Soil → Loam	9.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103224452	3300001593	Forest Soil	MKRASTLTLLLLAFCGAAQAKDLIGVFEDAVHNDPVIRQADANRLAAREAR
Ga0066673_102223012	3300005175	Soil	MNRASTLALVLLAFSGAAPAKDLVGVFEDAVHNDPVIRQADANRLAAREARPQAL
Ga0066388_1031385761	3300005332	Tropical Forest Soil	MNRAATLALGLLALTGTAAAKDLVGVFQDAVQNDPTIKQANANRLATREA
Ga0008090_101025223	3300005363	Tropical Rainforest Soil	MNRAATIALALLGLPLAAPAKDLIGVFEDAVHNDPVIRQADANRLAAR
Ga0070735_100674011	3300005534	Surface Soil	MNRAAIATAGLVALLCSAVAEPKDLIGVFEDAVHNDPVIRQADANRLAAR
Ga0070696_1010844381	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNRAATLALVLLALPLAAPAKDLIAVFEDAVHNDPVIRQADANRLAAR
Ga0066699_101079731	3300005561	Soil	MNRASTLALVLLAFSGAAPAKDLVGVFEDAVHNDPVIRQADANR
Ga0066703_103777072	3300005568	Soil	MKRGLTALVLLVLAGAASAKDLVGVFEDAVHNDPQIRQADANRLAAREA
Ga0070761_100984871	3300005591	Soil	MNRAVTLALLLFAVAGSAAAKDLLGVFEDAVHSDPVIRQADANR
Ga0070766_105179182	3300005921	Soil	MNRASTLALVLLAFSGSAPAKDLVGVFEDAVHNDPVIRQADANRLAAR
Ga0066696_107405012	3300006032	Soil	MIRALIIAPMLLTLSGVAASKDLAGVFEDAVHNDPVIRQADANRLAAR
Ga0066652_1015575021	3300006046	Soil	MNRASTLALVLLAFSGAAQPKDLAGVFEDAVHNDPVIRQADANRLA
Ga0066710_1033623822	3300009012	Grasslands Soil	MKRGLAALVLLALADATSAKDLVGVFEDAVHNDPQIRQADANLLA
Ga0105243_103957623	3300009148	Miscanthus Rhizosphere	MNRAATLTLSLLALASAAGAKDLQGVFEDALHNDP
Ga0105238_124894612	3300009551	Corn Rhizosphere	MNRAATLTLSLLALASAAGAKDLQGVFEDALHNDPVIKQANA
Ga0126373_128056152	3300010048	Tropical Forest Soil	MNRAATLAPFLVALPLAAPAKDLIGVFEDALHNDPVIRQADAN
Ga0099796_100121623	3300010159	Vadose Zone Soil	MNRASTLALVLLAFSGGAPAKDLLGVFEDAVHNDPVIRQA
Ga0134063_102089252	3300010335	Grasslands Soil	MNRASTLALVLLAFSGAAPAKDLVGVFEDAVHNDPVIRQADAN
Ga0126378_125106232	3300010361	Tropical Forest Soil	MNRAASLALVLLALPLAAPAKDLIGVFEDAVHNDPVIRQ
Ga0126377_125388011	3300010362	Tropical Forest Soil	MNRAATLAPFLLALPLAAPAKDLIGVFEDALHNDPVIRQADANRLAA
Ga0126381_1030614502	3300010376	Tropical Forest Soil	MNRASTLALMLIIFAGAAQSKDLIGVFEDALHNDPVIRQADANRL
Ga0126381_1032863961	3300010376	Tropical Forest Soil	MLVCLLGTWAGTASSKDLIGVFEDALKNDPVIRQADANRLAA
Ga0137388_105561722	3300012189	Vadose Zone Soil	VLLAFSGAAPAKDLVGVFEDAVHNDPVIRQADANRLAAREAR
Ga0137399_100228521	3300012203	Vadose Zone Soil	MNRASTLALVLLAFSGAAPTKDLVGVFEDAVHNDPVIRQADANRLAAREARPQ
Ga0137380_103980263	3300012206	Vadose Zone Soil	MIRAPIIALMLLTLSGVAASKDLAGVFEDAVHNDPVIRQADANRL
Ga0137386_112299521	3300012351	Vadose Zone Soil	MNRASTLALVLLAFSGAAPAKDLVGVFEDAVHNDPVIRQADANRL
Ga0137385_114959312	3300012359	Vadose Zone Soil	MIRAPIIALMLLTLSGVAASKDLAGVFEDAVHNDPVI
Ga0137416_116429712	3300012927	Vadose Zone Soil	MNRASTLALVLLAFSGAAPTKDLVGVFEDAVHNDPVIRQADAN
Ga0126375_117946402	3300012948	Tropical Forest Soil	MNRAATLALVLLALPLAAPGKDLIGVFEDALHNDPVIRQADANRLAAR
Ga0164304_109509532	3300012986	Soil	MNRAATLTLSLLALASAAGAKDLQGVFEDALHNDPVIKQ
Ga0164306_115369242	3300012988	Soil	MNRAATLTLSLLALASAAGAKDLQGVFEDALHNDPVIKQA
Ga0137418_113055241	3300015241	Vadose Zone Soil	MNRASTLALVLLTFSGAAPAKDLVGVFEDAVRNDPVIRQAD
Ga0182041_106272982	3300016294	Soil	MNRAATLTLLLLALPLAAPAKDLIGVFEDALHNDPVIRQADANRLA
Ga0182040_117980521	3300016387	Soil	MNRAATLALLFSALPLAAPAKDLIGVFEDALHNDPVIRQADANRLAARE
Ga0182039_118202392	3300016422	Soil	MNRAATLAPVLLALPFAAPAKDLIGVFEDAVHNDPVIRQADDNRLA
Ga0187783_109585691	3300017970	Tropical Peatland	MPITRVLALAVLVLGCCCAQGKDLLAVFEDAVHNDPVIRQADANRLAARES
Ga0187816_104653781	3300017995	Freshwater Sediment	MNRVATVALALLALPLAAPAKDLIGVFEDALHNDPVIRQADANRLAAR
Ga0187784_105173631	3300018062	Tropical Peatland	MTRAFATALLLLVFAGAAQPKDLIGVFEDAVHNDPVILQADANRLAARE
Ga0187773_102445762	3300018064	Tropical Peatland	MKRAAPFACLLLGFAATAQPKDLIGVFEDALHNDPVIRQA
Ga0187772_107575731	3300018085	Tropical Peatland	MKRVAAVMLALLPLSGGAQGKDLIGVFQDALQNDPVIRQADANR
Ga0187772_112114792	3300018085	Tropical Peatland	MKRAATLACLLAGFAGSAQPKDLVGVFEDALKNDPVIRQADANRLAARE
Ga0179594_101878131	3300020170	Vadose Zone Soil	MNRASTLALVLLAFSGGAPAKDLLGVFEDAVHNDPVIRQADANRL
Ga0179592_100340121	3300020199	Vadose Zone Soil	MNRAPTLALVLLAFSGTAPAKDLVGVFEDAVHNDP
Ga0210401_105986001	3300020583	Soil	MTRAITLTACLLACAGLANAKDLTGVFEDAVKNDPVIRQADANRMA
Ga0210405_102416591	3300021171	Soil	MRAITLACLLAGFASTAQPNDLVGVFEDALKSDPVIRQADANR
Ga0210405_112467451	3300021171	Soil	MNRAATLLLGLLFYCAAAQPKDLVGVFEDALHNDPVIRQADANRLA
Ga0210408_112442722	3300021178	Soil	MNRAATLALVLLVSTGAAGAKDLVGVFEDAVNNDPVIRQADANRLAAREARPQALAAV
Ga0213877_102891121	3300021372	Bulk Soil	MSRASRLALVLLSFAGAAQARDLVGVFEDALRSDPVIRQAEANRMAS
Ga0210385_110594762	3300021402	Soil	MTRACTLALLLLAISGAAHSKDLIGVFEDAVHNDPVIRQADANR
Ga0210384_101289721	3300021432	Soil	MNRASTLALVLLGFSGSAPAKDLVGVFEDAVHNDPVIRQADANRLAAREARPQA
Ga0210402_112456752	3300021478	Soil	MNRAPTLALVLLAFSGAAGAKDLVGVFEDAVHNDPVIRQADANRLAARE
Ga0247695_10443202	3300024179	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDAVHNDPVIR
Ga0209153_10593643	3300026312	Soil	MIRAPIIALTLLTLSGVAASKDLAGVFEDAVHNDPVIRQADANRL
Ga0209268_10133834	3300026314	Soil	MNRASTLALVLLAFSGAAPAKDLVGVFEDAVHNDPVI
Ga0257149_10590302	3300026355	Soil	MNRAPTLALVLLAFSGTAPAKDLVGVFEDAVHNDPVIRQADANRLAAREA
Ga0257168_11290541	3300026514	Soil	MNMSRALGLALALLAATAAAPAKDLIGVFEDALMNDP
Ga0179587_100621471	3300026557	Vadose Zone Soil	MNRAPTLALVLLAFSGTAPAKDLVGVFEDAVHNDPVIRQADA
Ga0209525_11651981	3300027575	Forest Soil	MNRASTLALVLLAFSGTAPAKDLVGVFEDAVHNDPVIRQADAIGGIHGIG
Ga0209106_10233003	3300027616	Forest Soil	MNRAPTLALVILAFSGTAPAKDLVGVFEDAVHNDPVIRQADA
Ga0209117_10533351	3300027645	Forest Soil	MNRASTLALVLLAFSGAAPAMDLVGVFEDAVHNDPVIRQADA
Ga0209579_102583881	3300027869	Surface Soil	MKRAAVLALAALAVTGAAQGKDLIGVFEDAVHNDPVIRQADANRL
Ga0209526_108953612	3300028047	Forest Soil	MNRASTLALVLLAFSGTAPAKDLVGVFEDAVHNDPVIRQADAN
Ga0170824_1095585042	3300031231	Forest Soil	MNRAATLLLVLLVTAAPAQPKDLVGVFEDALRNDPVIRQADANRLAAREARPQ
Ga0318541_100461853	3300031545	Soil	MNRAATVALALLALPLAAPAKDLIGVFEDALHNDPVIRQADDRVIVE
Ga0318538_100446801	3300031546	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDALHNDPVIRQAD
Ga0318571_100485941	3300031549	Soil	MNRAATIALALLALPLAAPAKDLIGVFEDALQNDPVIRQADANRL
Ga0306917_107067592	3300031719	Soil	MNRAATLALLLLAFSATAPANDLIGVFEDALHNDPVIRQAD
Ga0307469_102559673	3300031720	Hardwood Forest Soil	MNRASTFALVLLAFSGTAPAKDLVGVFEDAVHNDPVIRQ
Ga0318502_102691981	3300031747	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDALHNDPVIRQADANR
Ga0318494_102969691	3300031751	Soil	MNRAATLAPVLLALPLAAPAKDLIGVFEDAVHNDPVIR
Ga0318535_103411972	3300031764	Soil	MNRAATLAPVLLALPLAAPAKDLIGVFEDAVHNDP
Ga0318554_102456182	3300031765	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDALHNDPVIRQADA
Ga0318509_102487262	3300031768	Soil	MNRAATLAPVLLALPLAAPAKDLIGVFEDAVHNDPVIRQADANRLA
Ga0318526_100384131	3300031769	Soil	MNRAATLAPVLLALPLAAPAKDLIGVFEDAVHNDPV
Ga0318498_103408122	3300031778	Soil	MNRAATLALYLFALPLAAPAKDLTGVFEDALQNDPVIR
Ga0318552_100293783	3300031782	Soil	MNRAATLTLLLLALPLAAPAKDLIGVFEDALHNDP
Ga0318552_100364991	3300031782	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDALHNDPVIR
Ga0318529_100381331	3300031792	Soil	MNRAATIALALLALPLAAPAKDLIGVFEDALQNDPV
Ga0318567_102586422	3300031821	Soil	MNRAATLTLLLLALPLAAPAKDLIGVFEDALHNDPVIRQADANRLAARE
Ga0318564_100429483	3300031831	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDAVHNDPV
Ga0318511_101785591	3300031845	Soil	MNRAATLTLLLLALPLAAPAKDLIGVFEDALHNDPVIRQADANRLAAR
Ga0318536_100688913	3300031893	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDAVHNDPVIRQADANRLAARESK
Ga0318520_105528781	3300031897	Soil	MNRASKLALLLLVAGAAEAKDLVGVYDDALHNDPVIRQADANRLAARESR
Ga0306921_109520552	3300031912	Soil	MNRAATLALLFSALPLAAPAKDLIGVFEDALHNDPVIRQ
Ga0310912_108252271	3300031941	Soil	MNRAATLALLFSALPLAAPAKDLIGVFEDALHNDPVIRQADANRLAARESK
Ga0310912_111625442	3300031941	Soil	MNRAATLALFLFALPLAAPAKDLIGVFEDALHNDPVIRQ
Ga0310913_104240512	3300031945	Soil	MNRAATLALLFSALPLAAPAKDLIGVFEDALHNDPVIRQADANRL
Ga0310910_108072002	3300031946	Soil	MNRAATLTLLLLALPLAAPAKDLIGVFEDALHNDPVI
Ga0318562_101134993	3300032008	Soil	MNRAATLALYLFALPLAAPAKDLIGVFEDALHNDPVIR
Ga0318562_108296642	3300032008	Soil	MNRAATLTLLLLALPLAAPAKDLIGVFEDALHNDPVIRQA
Ga0318549_103684091	3300032041	Soil	MNRAATLALYLFALPLAAPAKDLIGVFEDALHNDPVIRQAD
Ga0318556_100042664	3300032043	Soil	MNRAATLALLFSALPLAAPAKDLIGVFEDALHNDPV
Ga0318506_103588751	3300032052	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDAVHNDPVIRQADAN
Ga0318570_104712841	3300032054	Soil	MNRAATLALYLFALPLAAPAKDLTGVFEDALQNDPVIRQADANRLA
Ga0318510_103199012	3300032064	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDAVHNDPVIRQADANR
Ga0318524_107947191	3300032067	Soil	MNRAATLALVLLALPLAAPAKDLIGVFEDALHNDPVIRQADAN
Ga0306924_109803572	3300032076	Soil	MNRAATLALYLFALPLAAPAKDLIGVFEDALHNDPVI
Ga0307470_107774482	3300032174	Hardwood Forest Soil	MNRASTLALVLLAFSGTAPAKDLVGVFEDAVHNDPVIRQA
Ga0307472_1002123483	3300032205	Hardwood Forest Soil	MTRAITLTVCLLSCAGLADAKDLRGVFEDAVKNDPVIRQAEANRMAA
Ga0310914_110098512	3300033289	Soil	MNRAATLTLLLLALPLAAPAKDLIGVFEDALHNDPVIRQ
Ga0318519_106561952	3300033290	Soil	MNRAATIALALLALPLAAPAKDLIGVFEDALQNDPVIR
Ga0318519_106744752	3300033290	Soil	MNRAATLAPVLLALPLAAPAKDLIGVFEDAVHNDPVIRQADDR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102012

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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