Metagenome / Metatranscriptome Family F102009

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102009
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	157 residues
Representative Sequence	MTGKRTLRVVLAALSLALLATGAAQGGGVRTHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQTFTVGTGTEFLRWSHGVPTVVHSDDLRAGDWVVVNVRAPHNASLSQVESRPAGIVADRVAKPNRPTYPLFLFRGTVAAPAGTS
Number of Associated Samples	90
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.57 %
% of genes near scaffold ends (potentially truncated)	99.02 %
% of genes from short scaffolds (< 2000 bps)	98.04 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.314 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.686 % of family members)
Environment Ontology (ENVO)	Unclassified (20.588 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.804 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.31% β-sheet: 26.78% Coil/Unstructured: 51.91%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF12802	MarR_2	4.90
PF12697	Abhydrolase_6	2.94
PF05995	CDO_I	0.98
PF13620	CarboxypepD_reg	0.98
PF09948	DUF2182	0.98
PF03466	LysR_substrate	0.98
PF10282	Lactonase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.37 %
Unclassified	root	N/A	15.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.37 %
Unclassified	root	N/A	15.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	66.67 %
Unclassified	root	N/A	15.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	64.71 %
Unclassified	root	N/A	15.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.98 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.98 %
Terasakiellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Terasakiellaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	64.71 %
Unclassified	root	N/A	15.69 %
Terasakiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Terasakiellaceae → Terasakiella	0.98 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	64.71 %
Unclassified	root	N/A	15.69 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.98 %
Terasakiella pusilla	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Terasakiellaceae → Terasakiella → Terasakiella pusilla	0.98 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	0.98 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	64.71 %
Unclassified	root	N/A	15.69 %
Methylobacterium sp. MB200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. MB200	0.98 %
Saccharothrix espanaensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix espanaensis	0.98 %
Terasakiella pusilla	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Terasakiellaceae → Terasakiella → Terasakiella pusilla	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1189150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300000890\|JGI11643J12802_12385634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1204	Open in IMG/M
3300001686\|C688J18823_10944984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300002568\|C688J35102_118030638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300002568\|C688J35102_120598337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1225	Open in IMG/M
3300004114\|Ga0062593_101811447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300004157\|Ga0062590_101966752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300004157\|Ga0062590_102718796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300004479\|Ga0062595_101806478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300004479\|Ga0062595_102253799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300004480\|Ga0062592_101604321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300004480\|Ga0062592_102402697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. MB200	528	Open in IMG/M
3300005093\|Ga0062594_101451994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300005178\|Ga0066688_10819409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300005186\|Ga0066676_10249044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1160	Open in IMG/M
3300005186\|Ga0066676_10294181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300005187\|Ga0066675_10799618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300005294\|Ga0065705_10475655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300005332\|Ga0066388_108338299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300005355\|Ga0070671_100909644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300005367\|Ga0070667_101711956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300005435\|Ga0070714_101670579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Terasakiellaceae → Terasakiella → Terasakiella pusilla	622	Open in IMG/M
3300005435\|Ga0070714_101917081	Not Available	578	Open in IMG/M
3300005438\|Ga0070701_10990942	Not Available	586	Open in IMG/M
3300005457\|Ga0070662_101561412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300005466\|Ga0070685_11342697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300005467\|Ga0070706_100054332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3696	Open in IMG/M
3300005467\|Ga0070706_101643078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300005471\|Ga0070698_101981663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix espanaensis	535	Open in IMG/M
3300005544\|Ga0070686_101629736	Not Available	546	Open in IMG/M
3300005713\|Ga0066905_101369402	Not Available	639	Open in IMG/M
3300005719\|Ga0068861_101560682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300005764\|Ga0066903_100136848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3467	Open in IMG/M
3300005764\|Ga0066903_102330099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1035	Open in IMG/M
3300005764\|Ga0066903_108225255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300006046\|Ga0066652_100875570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	858	Open in IMG/M
3300009137\|Ga0066709_103766347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300009137\|Ga0066709_104350307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300009148\|Ga0105243_12998966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300010038\|Ga0126315_11085816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300010040\|Ga0126308_10950247	Not Available	601	Open in IMG/M
3300010044\|Ga0126310_11422446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300010110\|Ga0126316_1063133	Not Available	523	Open in IMG/M
3300010124\|Ga0127498_1013590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300010140\|Ga0127456_1214109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300010321\|Ga0134067_10407199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300010329\|Ga0134111_10419326	Not Available	576	Open in IMG/M
3300010359\|Ga0126376_11631766	Not Available	678	Open in IMG/M
3300010366\|Ga0126379_10193303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1949	Open in IMG/M
3300010400\|Ga0134122_12300652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300012011\|Ga0120152_1080418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	964	Open in IMG/M
3300012204\|Ga0137374_10511560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300012204\|Ga0137374_11252787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300012350\|Ga0137372_10259049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1365	Open in IMG/M
3300012360\|Ga0137375_11231761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300012362\|Ga0137361_11168299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300012375\|Ga0134034_1252399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300012532\|Ga0137373_10555869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300012957\|Ga0164303_11322971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300012958\|Ga0164299_10911623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300012961\|Ga0164302_10755268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300012971\|Ga0126369_12723274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300012976\|Ga0134076_10572967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300012987\|Ga0164307_10663565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300012987\|Ga0164307_11405198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300012989\|Ga0164305_11482063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300013296\|Ga0157374_11121468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300013308\|Ga0157375_12932097	Not Available	570	Open in IMG/M
3300013501\|Ga0120154_1082171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300014058\|Ga0120149_1078119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300014157\|Ga0134078_10506740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300014166\|Ga0134079_10135337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300014325\|Ga0163163_12849270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300014745\|Ga0157377_11490019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300014823\|Ga0120170_1122680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300015373\|Ga0132257_101884219	Not Available	769	Open in IMG/M
3300015374\|Ga0132255_106365462	Not Available	500	Open in IMG/M
3300018027\|Ga0184605_10508062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300018073\|Ga0184624_10511063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300020080\|Ga0206350_10465958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300021073\|Ga0210378_10379571	Not Available	525	Open in IMG/M
3300021344\|Ga0193719_10171006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	934	Open in IMG/M
3300022195\|Ga0222625_1116103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300022756\|Ga0222622_10674533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300025922\|Ga0207646_10905640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300025933\|Ga0207706_11018171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300028707\|Ga0307291_1075132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300028716\|Ga0307311_10071668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300028744\|Ga0307318_10302730	Not Available	560	Open in IMG/M
3300028768\|Ga0307280_10294575	Not Available	591	Open in IMG/M
3300028782\|Ga0307306_10196733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300028784\|Ga0307282_10380043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	684	Open in IMG/M
3300028787\|Ga0307323_10383844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300028819\|Ga0307296_10399646	Not Available	751	Open in IMG/M
3300028884\|Ga0307308_10638393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300031544\|Ga0318534_10691824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300031572\|Ga0318515_10422557	Not Available	713	Open in IMG/M
3300031769\|Ga0318526_10263458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300031805\|Ga0318497_10754024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300031938\|Ga0308175_101942409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300032008\|Ga0318562_10429923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300032261\|Ga0306920_100813169	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.35%
Plants	Host-Associated → Plants	11.76%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.84%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Sediment	Environmental → Aquatic → Sediment	2.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.69%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010110	Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012375	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_00560230	2124908045	Soil	MTSKKTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGATVNQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLRAPWKATLAQVEARPASIVSDRVSEPTPPT
JGI11643J12802_123856341	3300000890	Soil	MTSKKTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGATVNQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLRAPWKATLAQVEARPASIVSDRVSEPTPPTRP
C688J18823_109449841	3300001686	Soil	MTGKRTLRIVLAALSVVLLAASAAQGGGVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQNFAVGTGTEFLRWSHGVPTVVHANDLRAGDWVVVNVRAPYDASLAQVESRPAGIVSDRVAKPNRP
C688J35102_1180306381	3300002568	Soil	APYVFRGQLLATPPANATSVSVAIAGGNHLALTKMLGSSVNQSFTVGTGTEFLKWSNGIPTVVRSNDLTAGDWVTVRVRAPRAATLAEVESHPAGIVADRVKEPTPPGKPLYLFRGTLASPAGATSVTLNVRGGNRHALRLLIGSGRQQTFTFGQDTIFLLWQGKVPTVVTPAQ
C688J35102_1205983371	3300002568	Soil	MTGKRTLRVVLATLSLALLASSAAQGGGVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKAMLGSSVDQTFAVGTGTEFLRWSHGVPTVVHSNDLRAGDWVVVNVRAPHNASLAQVESRPAGIVSDRVAKPNRPTYPLFLFRGRVAAPAGTSTLAVDVRGG
Ga0062593_1018114471	3300004114	Soil	MTSKKTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGATVNQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLRAPWKATLAQVEARPASIVSDRVSEPTPPTRPLFLYRGTLAAPVGASSLTLNV
Ga0062590_1019667521	3300004157	Soil	MTGKRTLRVVLAALSLALLATGAAQGGGVRTHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQTFTVGTGTEFLRWSHGVPTVVHSNDLRAGDWVVVNVRAPHNASLSQVESRPAGIVADRVAKPTRPTYPLFLFKGTVAAPAGTSTLAVDVRGGNRRAL
Ga0062590_1027187962	3300004157	Soil	MISKRTLRIVLAALSLALLAAGAAQGGPVRAHYIFRGHLLATPPANATSVSLSVEGGNRIALKKMLGQSVNQNFAVGTGTEFLQWSHGVPTVVHANDLEAGDWVVVHVRAPWEASLSQIESRPAGIVADRGTEPN
Ga0062595_1018064781	3300004479	Soil	MTGKRTLRVVLAALSLALLATGAAQGGGVRTHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQTFTVGTGTEFLRWSHGVPTVVHSDDLRAGDWVVVNVRAPHNASLSQVESRPAGIVADRVAKPNRPTYPLFLFRGTVAAPAGTS
Ga0062595_1022537991	3300004479	Soil	MNGRKILVLAVAIASLVLPAAGAARGGPAHTHFVFRGHLTATPPANATSISVEVEGGNRLALKKMLGASVNQNFTVGTGTEFLKWSHGVPTVVHSNDLAAGDWVIVHVRAPRNATLSEIVSRPAGIVGDRGPNPNPPSRPLFLFGGTLTAPAGASSVTLNVKG
Ga0062592_1016043211	3300004480	Soil	MISKRTLRIVLAALSLALLAAGAAQGGPVRAHYIFRGHLLATPPANATSVSLSVEGGNRIALKKMLGQSVNQNFAVGTGTEFLQWSHGIPTVVHANDLEAGDWVVVHVRAPWEASLSQIESRPAGIVADRGTEPNPPSQPLYLFRGKLAAAAGTNTVTVDVRGGNRRALRLLIGQSTQQSFTYGPETIFLLWQGK
Ga0062592_1024026971	3300004480	Soil	MNGRKILVLAVAIASLVLPAAGAARGGPAHTHFVFRGHLTATPPANATSISVEVEGGNRLALKKMLGASVNQNFTVGTGTEFLKWSHGVPTVVHSNDLAAGDWVIVHVRAPRNATLSEIVSRPAG
Ga0062594_1014519941	3300005093	Soil	MTSKRTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGASVDQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLHAPWRATLAQVEARPASIVSDRVSEPTPPTRPLFLYRGKLAAPAGASSLTLDVRGGN
Ga0066688_108194091	3300005178	Soil	MTGKKTLRVVLAALSLALLASAAAQGGGVRAHYIFRGHLLATPPANATSISLTVEGGNRIALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHANDLRAGDWAVVNVRAPYGSSLAQVESRPAGIVADRGAKPNPPAYPLFLFRGRVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTFG
Ga0066676_102490441	3300005186	Soil	MNRKRTLRIVLAALAVALLVAGAAQGGGGFRAHYIFRGHLLTTPPANATSISLTVEGGNRIALKKMLGQSVQQNFAVGTGTEFLEWSHGVPTVVHSNDLQAGDWIVLHVRAPYNASLAQIEARPAGIVADRAVKPNPPSKPLYLFRGRLAAAAGP
Ga0066676_102941812	3300005186	Soil	MTGKKTLRVVLAALSLALLASAAAQGGGVRAHYIFRGHLLATPPANATSISLTVEGGNRIALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHANDLRAGDWAVVNVRAPYGSSLAQVESRPAGIVADRGAKPNPPTYPLFLFRGRVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTF
Ga0066675_107996181	3300005187	Soil	MTGKKTLRAVLAALSLALLASAAAQGGGVRAHYIFRGHLLATPPANATSISLTVEGGNRIALKAMLGASVDQNFAVGSGTEFLRWSHGVPTVIQANDLRAGDWAVVNVRAPYGSSLAQVESRPAGIVADRGAKPNPPTYPLFLFRGRVAAPAGTSTLSVDVRGGNRRAL
Ga0065705_104756551	3300005294	Switchgrass Rhizosphere	MTSKRTTGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGATVNQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLRAPWKA
Ga0066388_1083382991	3300005332	Tropical Forest Soil	GPGAHYEFRGHLLATPSSNATSISISVEGGNRLALRKMLGQGVNQSFAVGTGTEFLKWSHGVPTVVHSSDLAAGDWVTVNVRAPRSASLSEVEGKAAGVVADRGPNPTTASKPLFLFRGKLAAPAGTSSVTLDVKGGNRNGLRLLIGASTQQSFAYGPETIFLRWQGKVPT
Ga0070671_1009096441	3300005355	Switchgrass Rhizosphere	MTRKGTLRVLLAALSLALVVAGAAQGGGVRTHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQTFAVGTGTEFLRWSHGVPTVVHSDDLRAGDWVVVNVRAPQNATLSQVESRPAGIVADRIAKPNRPTYPLFLFKGRLAAPAGT
Ga0070667_1017119561	3300005367	Switchgrass Rhizosphere	GTLRVLLAALSLALVVAGAAQGGGVRTHYIFRGHLLATPPANATSISLTVEGGNRIALKKMLGSSVDQTFSVGTGTEFLRWSHGVPTVVHSEDLRAGDWVVVNVRAPHNASLSQVESRPAGIVSDRVAKPNRPTYPLFLFRGTLAAPAGTNTLTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPTVI
Ga0070714_1016705791	3300005435	Agricultural Soil	MTGKKIVSIAVAALSLGLVSAAAAAQGGHGAHYVFRGHLLATPSSNATSISISVEGGNRLALRKMLGQSVDQAFAVGTGTEFLKWSHGVPTVVHSSDLAAGDWVTVNVRAPRTASLSEVEGKAAGVVADRGPNPTTASKPLF
Ga0070714_1019170811	3300005435	Agricultural Soil	MISKRTPTLVLAILSLALLAAGAAQGRGPGGAHYIFRGQLSATPVANATSIALTVAGGNHLALRAMLGSSVNQSFAVGTATEFLKWSHGVPTVVHANDLAAGDWVVVNVRAPARASLSEVESQPAGVVSDRVTKPGPPAQPLFLFRGKL
Ga0070701_109909421	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTGKRMLRVALPVAALALAIAGAGAAKGPGAGAPYVFRGHLLATPPANATSISVEVAGGNRLALKKMLGSSVDQNFTVGTGTEFLKWRNGIPTVVHSNDLTAGDWVTVRVRAP
Ga0070662_1015614121	3300005457	Corn Rhizosphere	MTSKRTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGASVDQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLHAPWRATLAQVEARPASIVSDRVSEPTPPTRPLFLYRGKLAAPAGASSLTLDV
Ga0070685_113426971	3300005466	Switchgrass Rhizosphere	LPVAALALAIAGAGAAKGPGAGAPYVFRGHLLATPPANATSISVEVAGGNRLALKKMLGSSVDQNFTVGTGTEFLKWSNGIPTVVHSNDLSAGDWVTVRVRAPRAATLTEVESHPAGIVADRVKEPTPPGEPLYLFRGTLASPAGANSVTLDVRGGNRHALRLLIGSGRQQTFSFGQDTIFL
Ga0070706_1000543327	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKRTLGILVATCLALLAVSAAQGGDAGVRYVFRGHLLATPPANATSISISVEGGNRIALEKMLGSSVDQTFGVGTRTEFLKWSHGVPTVVQSNDLTAGDWIVIRVRAPWRATLSQVEARPAGIVSDRVTEPTPPSRPLYLFQGKLAAPAGTSSLTLDVR
Ga0070706_1016430781	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKRTLGTLAAMCLALLAVSAAQGAGAGARYVFRGHLLATPPANATSISISVEGGNRIALEKMLGASVDQTFTVGTSTEFLKWSHGVPTVVHSEDLTAGDWIVIRLHAPWRATLSQVEARPAGI
Ga0070698_1019816631	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AASLSLLAAGAAQGGGGFRAHYVFRGHLLANPPADATSIAVSVEGGNRIALQKMLGQSVNQNFAVGTGTVFLKWSHGIPTVVHSNDLAAGDWVTVRVPGRWNASLAEIESHPAGIVADRGPNPNPPSKPLYLFRGKLAAAAGTNTVTVDVRGGNRAALRLLVGQSTQQSFTYGPETI
Ga0070686_1016297361	3300005544	Switchgrass Rhizosphere	MTGKRMLRVALPVAALALAIAGGGAAKGPGAGAPYVFRGHLLATPPANATSISVEVAGGNRLALKKMLGSSVDQSFTVGTGTEFLKWSNGIPTVVHSNDLSAGDWVTVRVRAPRAA
Ga0066905_1013694021	3300005713	Tropical Forest Soil	MTGKRTFRIALTALTLGLLVVGAGAAQGGGFRAHYIFRGHLLATPPANATSISLEVEGGNHIALRKLLGQSVDQTFAVGTGTEFLKWSHGVPTVVHANDLTAGDWVVVNVRAPWGASLSRIESHPAGIVSDRVAKPNPPAKPLFLFRGKLAAPAGTSTVTLKVNGGNRHALRTLLGSARLQSFTYGP
Ga0068861_1015606822	3300005719	Switchgrass Rhizosphere	MTSKRTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGASVDQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLRAPWKATLAQVEARPASIMSDRVSEPTPPTRPLFLYRGKLAAPAGA
Ga0066903_1001368481	3300005764	Tropical Forest Soil	MTRKRTLRVVLAALSLALLVAGAAQGGGGRAHYSFRGHLLSTPPANATSISLTVEGGNHIALKKMLGAGVDQNFAVGTGTEFLKWSHGVPTVVHANDLTAGDWIVVNVRAPWRASLTQVEARPAGVVSDRVAKPNPPARPLFLFRGKLAVPASTTSVT
Ga0066903_1023300992	3300005764	Tropical Forest Soil	MTGKKIVRIAVAAMSLGLVSAAAAAQGGPGAHYVFRGHLLATPSSNATSVSISVEGGNRLALRKMLGQSVDQSFAVGTGTEFLKWSHGVPTVVHSNDLAAGDWITVNVRAPRTASLSEVEGKAAGVVADR
Ga0066903_1082252551	3300005764	Tropical Forest Soil	AQGGHGAHHVFRGHLLATPSSNATSISISVEGGNRLALRKMLGQSVDQAFAVGTGTEFLKWSHGVPTVVHSNDLAAGDWVTVNVRAPRSASLSEVEGKAAGVVADRGPNPTPASKPLFLFRGKLAAPAGTSSVTLDVKGGNRHGLRLLIGQSTQQSFAFGSETIFLRWQGKVPTVIA
Ga0066652_1008755701	3300006046	Soil	MTGKRILRVVLAALSLALLVSSAAQGGGVRAHYIFRGHLLATPPANATSISLTVEGGNRVALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHAGDLRAGDWVVVNVRAPYDASLTQVESRPAGIVSDRGAKPNPPAYPLFLFRGK
Ga0066709_1037663471	3300009137	Grasslands Soil	MTGKRTLRIVLAALSLALLASSAAQGGDVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQSFAVGTGTEFLRWSHGVPTVVHSSDLRAGDWLVVNVRAPYEASLAQVESRPAGIVSDRVAKPNPPAYPLFLFRGRVAAPAGTSTLTVDVRGGNRRALRLVLG
Ga0066709_1043503071	3300009137	Grasslands Soil	EAASMTGKRTLRVVLAALSLALFAAGAAQGGGGRAHYIFRGHLLATPPANATSISVTVEGGNRIALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHAGDLRAGDWLVVNVRAPYDSSLAQIESRPAGIVADRVAKPNRPTYPLFLFRGNVAAPAGTSTLSVDVHGGNRRA
Ga0105243_129989661	3300009148	Miscanthus Rhizosphere	MTAKRALSIAVAALSLGLVSAAAAAHGNPGAHHVFRGHLLATPSSNATSISISVEGGNRLALRKMLGQSVNQSFAVGTGTEFLKWSHGVPTVVHANDLAAGDWVTVNVRAPRTASLSEVEGKAAGVVADRGPNPTTASK
Ga0126315_110858161	3300010038	Serpentine Soil	MTGKRRLRVVLAALSLALLASGAAQGGGVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQTFAVGTGTEFLRWSHGVPTVVHSNDLRAGDWVVVNVRAAYDASLAQVESRPAGIVSDR
Ga0126308_109502471	3300010040	Serpentine Soil	RPSRSTDARRGEFGCIPTNGGRDAISKRTLRTVLAALSLALLAAGAAQGGPVRTHYIFRGHLLATPPANATSVSLSVEGGNRIALNKMLGQSVNQNFTVGTGTEFLQWSHGIPTVVHANDLEAGDWVVVHVRAPWEASLSQIESRPAGIVPDRGTQPNPPSRPLYLFRGKLAAAAGTSTVTVDVRAGNRRALRLLIGQS
Ga0126310_114224461	3300010044	Serpentine Soil	MTGKRTLRVVLAALSLALLASGAAQGGGVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQNFAVGTGTEFLRWSHGVPTVVRANDLNAGDWVVVNVRAPFSASLSQIESRPAGIVSDRVA
Ga0126316_10631331	3300010110	Soil	PMTGKRNVSIAVAALSLGLASAAAAAQGGQGTHYVFRGHLLAAPSPNATSISISVEGGNRLALRKMLGQTVAQTFAVGTGTEFLKWSRGVPTVVHANDLAAGDWVAVNVRAPRTASLSEVEGKAAGIVADRGPNPSPSSKPLFLFRGTLAAPAGSSSVTLDVNGGNRRGLRLLI
Ga0127498_10135901	3300010124	Grasslands Soil	HYIFRGHLLATPPANATSISLTVEGGNRIALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHADDLRAGDWAVVNVRAPYGSSLAQVESRPAGIVADRGVKPNPPTYPLFLFRGRVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTFGPETIFLRWQGKVP
Ga0127456_12141091	3300010140	Grasslands Soil	ASMTGKKTLRVVLAALSLALLASAAAQGGGVRAHYIFRGHLLATPPANATSTSLTVEGGNRIALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHANDLRAGDWAVVNVRAPYGSSLAQVESRPAGIVADRGAKPNPPAYPLFLFRGRVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQ
Ga0134067_104071991	3300010321	Grasslands Soil	ALSLALLASAAAQGGGVRAHYIFRGHLLATPPANATSISLTVEGGNRIALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHANDLRAGDWAVVNVRAPYGSSLAQVESRPAGIVADRGAKPNPPAYPLFLFRGRVAAPAGTSTLSLDVRGGNRRALRLLLGNTRQQSFTFGPETIFLRW
Ga0134111_104193262	3300010329	Grasslands Soil	MNRKRTLRIVLAALAVALLVAGAAQGGGGFRAHYIFRGHLLTTPPANATSISLTVEGGNRMALKRMLGQSVQQNFPGATGSEFLEWSHGVPTVVHSNDLQPGDWIVPHVRAPYNASLAQIEARPAGIVADRAVKPNPPSK
Ga0126376_116317661	3300010359	Tropical Forest Soil	MTGKKIVSIAVAALSLGLVSAAAAAQGGPGAHYEFRGHLLATPSSNATSISISVEGGNRLALRTMLAQSVDQAFAVGTGTEFLKWSHGVPTVVHANDLAAGDWVTVNVRAPRTASLSEVEGKAAGVVADRGPNPTTASKPLFLFRGKLAAPAGTSSVTLDVNGGNRHGLRLLIGQSTEQSFAYGSETIFLRW
Ga0126379_101933033	3300010366	Tropical Forest Soil	MNRKRTLRVVLAALTLALLVAGAAQGGAVRAHYIFRGQLLATPPANATSISLEVQGGNRIALSKMLGASVDQTFAVGTGTEFLKWSHGVPTVVHANDLTAGDWVVVNVRAPWRASLTQVEARPAGVVSDRVAKPN
Ga0134122_123006522	3300010400	Terrestrial Soil	MTSKRTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGASVDQTFAVGTGTEFLKWSHGVPTVVHANDLAAGDWVTVNVRAPRTASLSEVEGKAAGVVAD
Ga0120152_10804182	3300012011	Permafrost	MLRIALAAVSLSLLTAGAAQGGGGFRAHYVFRGHLLASPPANATSIAVSVEGGNRIALKKMLGQSVDQNFAVGTGTEFLKWSHGIPTVVHSNDLAAGDWVTVRVPGRWNDSLAEIESHPAGIVADRGPNPN
Ga0137374_105115602	3300012204	Vadose Zone Soil	MTSKRTLRIALAALSLALLVAGAAQGGGFRAHYIFRGHLLATPPANATSVSVSVEGGNHIALQKMLGASVNQSFTVGTGTEFLRWSHGIPTVVHANDLTAGDWVVVHVRAPWDASLSQIESRPAGIVADRGPNPHPPNQPLYLF
Ga0137374_112527871	3300012204	Vadose Zone Soil	MISKRTLRIVLAALSLALLGAGAAQGGGVRAHYIFRGHLLATPPANATSIAVSVEGGNRIALKKMLGESVDQNFAVGTGTEFLRWSHGVPTVVHANDLTAGDWVVVNVRAPWDASLSQIE
Ga0137372_102590493	3300012350	Vadose Zone Soil	MTSKRTLGLLAALSLALLAAGAAQGAGTGVRYVFRGHLLATPPANATSISISVEGGNRIALKKMLGSSVDQTFAVGTGTEFLKWSHGVPTVVLSNDLTAGDWITIHLRAAWNATLAQVEARPAGIVSDRATEPLPPNRPLFLFRGTLAAPAGTSSLTVD
Ga0137375_112317611	3300012360	Vadose Zone Soil	MTSKRTLRIALAALSLALLVAGAAQGGGFRAHYIFRGHLLATPPANATSVSVSVEGGNRIALQKMLGASVNQSFTVGTGTEFLRWSQGIPTVVHANDLTAGDWVVVHVRAPWDASLSQIESRPAGIVADRGPNPHPPNQPLYLFRGKLAAAAGTSTVTVDVRGGNRRALRLL
Ga0137361_111682992	3300012362	Vadose Zone Soil	MKSKRTLGILAAMCLSLLAVSAAQGAGAGARYVFRGHLLATPPASAASISISVEGGNRIALEKMLGASVDQSFTVGAGTEFLKWSHGVPTVVQSNDLTAGDWIVIRLHAPWNATLSQVEARPAGIVSDRVTEPTP
Ga0134034_12523991	3300012375	Grasslands Soil	TEAASMTGKKTLRVVLAALSLALLASAAAQGGGVRAHYIFRGHLLATPPANATSISLTVEGGNRIALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVQANDLRAGDWAVVNVRAPYGSSLAQVESRPAGIVADRGAKPNPPAYPLFLFRGRVAAPAGTSTLSVDVHGGNRRALRLLLGSTRGQTFTYGPETIFLRWQGKVP
Ga0137373_105558691	3300012532	Vadose Zone Soil	MTSKRTLGLLAALSLALLAAGAAQGAGTGVRYVFRGHLLATPPANATSISISVEGGNRIALKKMLGSSVDQSFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWITIHLRAAWNATLAQVEARPAGIVSDRATEPLPPNRPLFLFRGTLA
Ga0164303_113229711	3300012957	Soil	MTGKRAFRIALTVLTLGLLAVGVGAAQGGGFRAHYIFRGHLSATPPANATSISLTVEGGNHIALRKMLGSGVDQTFAVGTGTEFLKWSHGVPTVVQASDLTAGDWIVVNVRAPGWASLSQIESRPAGVVSDRGTKPNPPAKPLFLFRGKLAAPETASTLTLRVHGGNRLA
Ga0164299_109116231	3300012958	Soil	MTSKRTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGATVNQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLRAPWKATLAQVETRPASIVSDRVSEPTPPTRPLFLYRGTL
Ga0164302_107552681	3300012961	Soil	MTSKKTIGLLAALCLALLAVSAAQGAGPGTRYVFRGHLLATPPANATSISISVEGGNRIALQKMLGASVDQTFTVGTGTEFLKWSHGVPTVVHSEDLRAGDWVVVNVRAPHNASLSQVESRPAGIVSDRVAKLNRPTYPLFLFRGTLAAPAGTNTLTVDVRRGNRRALRLVLGNARQQSFTYGPETIFLRWQ
Ga0126369_127232741	3300012971	Tropical Forest Soil	MIGKRTVSIAVAALSLGLVSAAAAAQGAPGAHYVFRGHLLAAPSPNATSVSISVEGGNRLSLRKMLGQSVDQSFAVGTGTEFLKWSHGVPTVVHSNDLAAGDWITVNVRAPRTASLSEVEGKAAGVVADRGPNPTTASKPLFLLRGKLAAPAGTSTVTLDVKGGNRHGLRLLIGQ
Ga0134076_105729671	3300012976	Grasslands Soil	VLAALSLALLASAAAQGGGVRAHYIFRGHLLATPPANATSISLTVEGGNRIALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHANDLRAGDWAVVNVRAPYGSSLAQVESRPAGIVADRGVKPNPPTYPLFLFRGRVAAPAGTSTLSVDVRGGNRRALRLLLGNTRQQSFTF
Ga0164307_106635651	3300012987	Soil	MLRVALPVAALALAIAGAGAAKGPGAGAPYVFRGHLLATPPANATSISVEVAGGNRLALKKMLGSSVDQSFTVGTGTEFLKWSNGIPTVVHSNDLSAGDWVTVRVRAPRAATLAEVESHPAGIVADRVKEPTPPGKPLYLFRGTLASPAGANSVTLDVRGGNRHALR
Ga0164307_114051981	3300012987	Soil	KRTLRVVLAALSLALLATGAAQGGGAGTHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSAVDQTFSVGTGTEFLKWSHGVPTVVHSEDLRAGDWVIVNVRAPHNASLSQVESRPAGIVSDRVAKPNRPTYPLFLFRGTLAAPAGTNTLTVDVRGGNRRALRLVLGNARQQSFTYGPETIFLRWQGKVPT
Ga0164305_114820631	3300012989	Soil	MTSKKTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGATVNQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLRAPWKATLAQVETRPASIVSDRVSEPTPPTRPLFLYRGTLAAPVGASSLTLNVSGGNRLALRTMIGQSNQ
Ga0157374_111214682	3300013296	Miscanthus Rhizosphere	MLRVALPVAALALAIAGAGAAKGPGAGAPYVFRGHLLATPPANATSISVEVAGGNRLALKKMLGSSVDQNFTVGTGTEFLKWSNGIPTVVHSNCLSAGDWVTVRVRAPRAATLAEVESHPAGIVANRVTEPTPPGKPLYLFRG
Ga0157375_129320971	3300013308	Miscanthus Rhizosphere	MTRKRTLRVVLAALSLALLATGAAQGGGAGTHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGSAVDQTFSVGTGTEFLKWSHGVPTVVHSEDLRAGDWVVVNVRAPHNASLSQVESRPAGIVSDRVAKPNRPTYPLFLFRGTLAAPAGTNTLT
Ga0120154_10821711	3300013501	Permafrost	MLRIALAAVSLSLLAAGAAQGGGGFRAHYVFRGHLLASPPANATSIAVSVEGGNRIALMKMLGQSVNQNFAVGTGTEFLKWSHGIPTVVHSNDLAAGDWVTVRVPGRWNDSLTEIESHPA
Ga0120149_10781191	3300014058	Permafrost	MLRIALAAVSLSLLAAGAAQGGGGFRAHYVFRGHLLASPPANATSIAVSVEGGNRIALMKMLGQSVNQNFAVGTGTEFLKWSHGIPTVVHSNDLAAGDWVTVRVPGRWNDSLTEIESHPAGIVADRGPNPNPPNKPLYLFRGKLTAAAGTNTVTLGVRGGNRPALRLLVGQSSQQWFTYGPATIFL
Ga0134078_105067401	3300014157	Grasslands Soil	MNRKRTLRIVLAALAVALLVAGAAQGGGGFRAHYIFRGHLLTTPPANATSISLTVEGGNRIALKKMLGQSVQQNFAVGTGTEFLEWSHGVPTVVHSNDLQAGDWIVLHVRAPYNASLAQIEARPAGIVADRAVKPNPPSKPLYLFRGRLAAAAGPTTVTVDVRGGNRRALRLLIGQPLQQSFT
Ga0134079_101353372	3300014166	Grasslands Soil	MTGKRILRVVLAALSLALLVSSAAQGGGVRAHYIFRGHLLATPPANATSISLTVEGGNRVALKAMLGASVDQNFAVGTGTEFLRWSHGVPTVVHAGDLRAGDWVVVNVRAPYDASLTQVESRPAGIVSDRGAKPNPPAYPLFLFRG
Ga0163163_128492701	3300014325	Switchgrass Rhizosphere	MLRVALPVAALALAIAGGGAAKGPGAGAPYVFRGHLLATPPANATSISIEVAGGNRLALKKMLGSSVDQNFTVGTGTEFLKWSNGIPTVVHSNDLSAGDWVTVRVRAPRAATLAEVESHPAGIVA
Ga0157377_114900191	3300014745	Miscanthus Rhizosphere	MTRKGTLRVLLAALSLALVVAGAAQGGGVRTHYIFRGHLLATPPANATSISLTVEGGNRIALKKMLGSSIDQTFSVGTGTEFLRWSHGVPTVVHSDDLRAGDWVVVNVRAPQNATLTQVESRPAGIVADRIAKPNQPTYPLFLFKGRLAAPAGTSTVTVDVRGGNRRAL
Ga0120170_11226801	3300014823	Permafrost	MNSKRMLGFALAVLALALPAAGGAKDRPDGAHYVFRGHLLSSPPANATSISVQIEGGNRIALQKMLGASVNQTFAVGTGTEFLKWSNGIPTVVHSNDLAAGDWLSVNVRAPRNASLAEIETHPAGIVGDSGPN
Ga0132257_1018842192	3300015373	Arabidopsis Rhizosphere	MIGKRALPVVLIALSLGLLAAGVAQGGGAGAHYVFRGHLLATPPANATSISVTVEGGNRIALKKMLGSSVDQTFAVGTGTEFLKWSHGVPTIVHANALQAGDWVAVNVRAAFDASLSQIESRPAGIVSDHVAKPNRPTYPLYLFRGTVAAPAATGTVSVDVRGGNRAQPV
Ga0132255_1063654621	3300015374	Arabidopsis Rhizosphere	MVRVALSVAALALVVVGAGAAKGPGAGAPYVFRGHLLAAPPANATSISVEVAGGNRLALKKMLGSSVDQNFTVGTGTEFLKWRNGIPTVVHSNDLTAGDWVTVRVRAPRAATLAEV
Ga0184605_105080621	3300018027	Groundwater Sediment	DMISKRTLRIVLAALSLALLGVGAAQGDSVRAHYIFRGHLLAAPPANATSISVTVEGGNRIALKKMLGASVNQNFTVGTGTEFLKWSNRVPTVVHSNDLTAGDWVVVHVRAPWEATLSQIESRPAGIVADRAVKPNPPNKPLYLFRGRLAASAGTSTVTVNVRGGNHRALRLLI
Ga0184624_105110631	3300018073	Groundwater Sediment	MTGKRTLRVVLAALSLALLAAGAAQGGGLRAHYIFRGHLLATPPANATSISLTVEGGNRIALKKMLGSSVDQTFAVGTGTEFLRWSNGIPTVVHSNDLAAGDWVTVRVRAPRAATLAEVASHPAGIVADRVKEP
Ga0206350_104659581	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	RQMTCKRTLRVVLAALSLALLAVGAAQGGGVRTHSIFRGHLLTTPPANATSISLTVEGGNRIALKKLLGSSVDQNFTVGTGTEFLKWRNGIPTVVHSNDLTAGDWVTVRVRAPRAATLTEVESHPAGIVADRIAKPNRPTYPLFLFRGRLAAPAGTSMLTVDVRGVNRRALRLV
Ga0210378_103795711	3300021073	Groundwater Sediment	MTSKRTIGVLAAMCLVLLAVSTAAQGAGGGVRYVFRGHLLATPPANATSISISVEGGNRIALKKMLGASVNQSFTVGTGTVFLKWSHGVPTVVHSNDLTAGDWVVIRVRAPWRATLAQVEARPAGIVSDRVAEPTPPNRPLFLFRGTLAAPAGTSSLTLDVRGGNRLALR
Ga0193719_101710062	3300021344	Soil	MISKRTLRIVLTALSLALLGVGAAQGDSVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGASVNQNFTVGTGTEFLKWSNGVPTVVHSNDLTAGDWVVVHVRAPWEATLSQIESRPAGIV
Ga0222625_11161031	3300022195	Groundwater Sediment	AVAVLSLVLPAAGAAQGGGPARTHFLFRGHLLATPPANATSISVEVEGGNRLALKKMLGSSVDQTFAVGTGTEFLKWSNGVPTVVHSNDLTAGDWVVVHVRAPWEATLSQIESRPAGIVADRAVKPNPPNKPLYLFRGRLAASAGTSTVTVNVRGGNHRALRLLIGQSLQQSFAYGPETIFLLWQ
Ga0222622_106745331	3300022756	Groundwater Sediment	MTGKRTLRVVLATLSLALLASGAAQGGGVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKAMLGSSVDQTFAVGTGTEFLRWSHGVPTVVHSNDLRAGDWVVVNVRAPYNASLAQIESRPAGIVSDRVAKPNRPTYPLFLFRGRVAAPAGTSTLAVDVRGGNRRAL
Ga0207646_109056402	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKSKRTLGTLAAMCLALLAVSAAQGAGAGARYVFRGHLLATPPANATSISISVEGGNRIALEKMLGASVDQTFTVGTSTEFLKWSHGVPTVVHSEDLTAGDWIVIRLHAPWRATLSQVEARPAGIVSDRVTEPTPPNRPLYLFRGKLAAPAGTSTLTLDVRGGNRPALRLLVGQSSQQTFTYGP
Ga0207706_110181711	3300025933	Corn Rhizosphere	MTSKRTIGLLAALCLALLAVSAAQGAGPGARYVFRGHLLATPPANATSISISVEGGNRIALQKMLGASVDQTFAVGTGTEFLKWSHGVPTVVHSNDLTAGDWIVIRLHAPWRATLAQVEARPASIVSDRVSEPTPPTRPLFLYRGKLAAPAGESSLTLDVRSGNRLALR
Ga0307291_10751321	3300028707	Soil	MTGKRTLRVVLATLSLALLASGAAQGGGVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKAMLGSSVDQTFAVGTGTEFLRWSHGVPTVVHSNDLRAGDWVVVNVRAPYNASLAQIESRPAGIVSDRVAKPNRPTYP
Ga0307311_100716681	3300028716	Soil	MISKRTLRIVLAALSLALLGVGAAQGDSVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGTSVNQNFTVGTGTEFLKWSNGVPTVVHSNDLTAGDWVVVHVRAPWEATLSQIE
Ga0307318_103027301	3300028744	Soil	MTGNRTLRVVLAALSLALLAAGAAQGGGLRAHYIFRGHLLATPPANATSISLTIEGGNRIALKKMLGSSVDQTFAVGTGTEFLKWSHGVPTVVHANDLRAGDWLVVNVRAPHDATLSQVESRPAGIVSDRGAKPNPPARPLFLFRGR
Ga0307280_102945751	3300028768	Soil	MISKRTLRIVLAALSLALLGVGAAQGDSVRAHYIFRGHLLAAPPANATSISVTVEGGNRIALKKMLGASVNQNFTVGTGTEFLKWSNRVPTVVHSNDLTAGDWVVVHVRAPWEATLSQIESRPAGIVADRAVKPNPPNKRLYLFRGRLAASAGTSTVTVNVRGGNHRALRLLIGQSLQQS
Ga0307306_101967331	3300028782	Soil	GKRTLRVVLATLSLALLASGAAQGGGVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKAMLGSSVDQTFAVGTGTEFLRWSHGVPTVVHSNDLRAGDWVVVNVRAPYNASLAQIESRPAGIVSDRVAKPNRPTYPLFLFRGRVAAPAGTSTLAVDVRGGNRRALRLVLGTGRQQSFTYGPETIFLRWQ
Ga0307282_103800431	3300028784	Soil	MISKRTLRIVLAALSLALLGVGAAQGDSVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGASVNQNFTVGTGTEFLKWSNRVPTVVHSNDLTAGDWVVVHVRAPWEATLSQIESRPAGIVADRAVKPNPPNKPLYLFRGRLA
Ga0307323_103838441	3300028787	Soil	MISKRTLRIVLAALSLALLGVGAAQGDSVRAHYIFRGHLLAAPPANATSISVTVEGGNRIALKKMLGASVNQNFTVGTGTEFLKWSNRVPTVVHSNDLTAGDWVVVHVRAPWEATLSQIESRPAGIVADRAVKPNPPNKPLYLFRGRLAASAGTSTVTVNVR
Ga0307296_103996461	3300028819	Soil	MTGKRMFRVVVSVAALALTVAGAGAAKGPGAGAPHIFRGHLLASPPANATSISVEVAGGNRLALKKMLGASVDQNFAVGTGTEFLRWSNGIPTVVHSNDLAAGDWVTVRVRAPRAATLAEVESHPAGMVADRVKEPTPPGKPLYLFRGTLASPAGANSVTLNVRGGNRHALRLLIGA
Ga0307308_106383931	3300028884	Soil	MISKRTLRIVLAALSLALLGVGAAQGDSVRAHYIFRGHLLAAPPANATSISVTVEGGNRIALKKMLGASVNQNFTVGTGTEFLKWSNGVPTVVHSNDLTAGDWVVVHVRAPWEGTLSQIESRPAGIVADRAVKPNPPNKPLYLFRGRLAASAGT
Ga0318534_106918241	3300031544	Soil	MTGKKIVSIAVAAMSLGLVSAAAAAQGGPGAHYVFRGRLLATPSSNATSVSISVEGGNRLALRQMLGQSVDQSFAVGTGTEFLKWSHGVPTVVHSNDLAAGDWITVNVRAPRTASLSEVEGKAAGVVADRGPNPTPASKPLFLFRGKLAAPAGTSSVTLDVRGGN
Ga0318515_104225571	3300031572	Soil	MNRKRTLRAALAALALGLLAVGAAQGGVVRAHNIYRGQLLATPPANATSISVSVEGGNKIALQKMLGSSVDQNFAVGTGTEFLKWSHGIPTVVQANALTAGDWVVVNVRAPWRASLAQIESQPAGVVSDRVAKPNPPAMPLFLFRGRLAAPAGTSTVTVNVHGGNRLALR
Ga0318526_102634582	3300031769	Soil	MTGKKIVSIAVAAMSLGLVSAAAAAQGGPGAHYVFRGRLLATPSSNATSVSISVEGGNRLALRQMLGQSVDQSFAVGTGTEFLKWSHGVPTVVHSNDLAAGDWITVNVRAPRTASLSEVEGKAAGVVADRGPNPTPASKPLFLFRGKLAAPAGTSSVTLDVRGGNRHGLRLL
Ga0318497_107540241	3300031805	Soil	MTGKKIVSIAVAALSLGLVSAAAAAQGGQGAHHVFRGHLLATPSSNATSISISVEGGNRLALRKMLGQSVDQSFAVGTGTEFLKWSHGVPTVVHSNDLAAGDWVTVNVRAPRTAS
Ga0308175_1019424091	3300031938	Soil	MTGKRTLRVVLAALSLALLASGAAQGGGVRAHYIFRGHLLATPPANATSISVTVEGGNRIALKKMLGASVDQTFAVAGSTEFLQWAKGVPDVVTAADLAAGDWVVVNVRAPRGADLATIEGRPAAIVSDRGDEPNPPAQPLYLFRGTVTSSSGSALAVHVAGGNRRALRLLLGASADRTFAVDGETIFLLWQG
Ga0318562_104299232	3300032008	Soil	MTGKKIVSIAVAAMSLGLVSAAAAAQGGPGAHYVFRGRLLATPSSNATSVSISVEGGNRLALRQMLGQSVDQSFAVGTGTEFLKWSHGVPTVVHSNDLAAGDWITVNVRAPRTASLS
Ga0306920_1008131693	3300032261	Soil	MTGKKIVSIAVAAMSLGLVSAAAAAQGGPGAHYVFRGRLLATPSSNATSVSISVEGGNRLALRQMLGQSVDQSFAVGTGTEFLKWSHGVPTVVHSNDLAAGDWITVNVRAPRTASLSEVEGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102009

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences