Metagenome / Metatranscriptome Family F101990

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101990
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	72 residues
Representative Sequence	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ
Number of Associated Samples	81
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.69 %
% of genes near scaffold ends (potentially truncated)	38.24 %
% of genes from short scaffolds (< 2000 bps)	79.41 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.941 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (39.216 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.882 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.00% β-sheet: 0.00% Coil/Unstructured: 49.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08281	Sigma70_r4_2	30.39
PF02321	OEP	2.94
PF04542	Sigma70_r2	1.96
PF00582	Usp	0.98
PF04116	FA_hydroxylase	0.98
PF00155	Aminotran_1_2	0.98
PF13090	PP_kinase_C	0.98
PF01066	CDP-OH_P_transf	0.98
PF04185	Phosphoesterase	0.98
PF07228	SpoIIE	0.98
PF16901	DAO_C	0.98
PF00005	ABC_tran	0.98
PF13365	Trypsin_2	0.98
PF01546	Peptidase_M20	0.98
PF01263	Aldose_epim	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	5.88
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.96
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.96
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.98
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.98
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.98
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.98
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.98
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.98
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
All Organisms	root	All Organisms	47.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
cellular organisms	root	All Organisms → cellular organisms	47.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.22 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	25.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.86 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.49 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.90 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.49 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	1.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.94 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.49 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100712619	All Organisms → cellular organisms → Bacteria	5358	Open in IMG/M
3300000955\|JGI1027J12803_102455087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1782	Open in IMG/M
3300004152\|Ga0062386_100001211	All Organisms → cellular organisms → Bacteria	16881	Open in IMG/M
3300004633\|Ga0066395_10269703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300005332\|Ga0066388_100835693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1508	Open in IMG/M
3300005437\|Ga0070710_10297253	Not Available	1053	Open in IMG/M
3300005439\|Ga0070711_100058706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2669	Open in IMG/M
3300005536\|Ga0070697_100781831	Not Available	844	Open in IMG/M
3300005764\|Ga0066903_100382622	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2302	Open in IMG/M
3300005764\|Ga0066903_101861780	Not Available	1151	Open in IMG/M
3300005764\|Ga0066903_103515890	Not Available	844	Open in IMG/M
3300005764\|Ga0066903_108075577	Not Available	539	Open in IMG/M
3300006163\|Ga0070715_10069544	Not Available	1569	Open in IMG/M
3300006174\|Ga0075014_100629237	Not Available	617	Open in IMG/M
3300006175\|Ga0070712_100121746	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300006854\|Ga0075425_100095942	All Organisms → cellular organisms → Bacteria	3366	Open in IMG/M
3300006854\|Ga0075425_100460596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1464	Open in IMG/M
3300009792\|Ga0126374_10315072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300010048\|Ga0126373_11991561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300010048\|Ga0126373_12134324	Not Available	622	Open in IMG/M
3300010343\|Ga0074044_10346409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300010359\|Ga0126376_10131544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1971	Open in IMG/M
3300010360\|Ga0126372_13152181	Not Available	512	Open in IMG/M
3300010361\|Ga0126378_11732980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300010361\|Ga0126378_12659996	Not Available	572	Open in IMG/M
3300010376\|Ga0126381_100206322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2631	Open in IMG/M
3300010376\|Ga0126381_101228544	Not Available	1083	Open in IMG/M
3300010376\|Ga0126381_101443739	Not Available	994	Open in IMG/M
3300010376\|Ga0126381_101891431	Not Available	861	Open in IMG/M
3300010398\|Ga0126383_10025607	All Organisms → cellular organisms → Bacteria → Acidobacteria	4603	Open in IMG/M
3300010398\|Ga0126383_10029186	All Organisms → cellular organisms → Bacteria	4352	Open in IMG/M
3300012202\|Ga0137363_10299773	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300012971\|Ga0126369_10276945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1666	Open in IMG/M
3300016270\|Ga0182036_10355056	Not Available	1131	Open in IMG/M
3300016319\|Ga0182033_10500352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300016341\|Ga0182035_10094518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2173	Open in IMG/M
3300016387\|Ga0182040_10070411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2265	Open in IMG/M
3300016387\|Ga0182040_11055754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300016404\|Ga0182037_10523790	Not Available	997	Open in IMG/M
3300016404\|Ga0182037_11614206	Not Available	577	Open in IMG/M
3300016422\|Ga0182039_11476502	Not Available	619	Open in IMG/M
3300017955\|Ga0187817_10220412	Not Available	1209	Open in IMG/M
3300020579\|Ga0210407_10692056	Not Available	791	Open in IMG/M
3300020580\|Ga0210403_10981393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300020580\|Ga0210403_11347445	Not Available	543	Open in IMG/M
3300020581\|Ga0210399_10002269	All Organisms → cellular organisms → Bacteria	14995	Open in IMG/M
3300020582\|Ga0210395_10884050	Not Available	664	Open in IMG/M
3300021168\|Ga0210406_10604947	Not Available	855	Open in IMG/M
3300021170\|Ga0210400_11495254	Not Available	536	Open in IMG/M
3300021171\|Ga0210405_10098850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2302	Open in IMG/M
3300021181\|Ga0210388_10416760	Not Available	1181	Open in IMG/M
3300021407\|Ga0210383_11380029	Not Available	587	Open in IMG/M
3300021475\|Ga0210392_10838784	Not Available	687	Open in IMG/M
3300021560\|Ga0126371_10635850	Not Available	1216	Open in IMG/M
3300021560\|Ga0126371_12406252	Not Available	637	Open in IMG/M
3300025905\|Ga0207685_10623262	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	581	Open in IMG/M
3300025906\|Ga0207699_10275328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300025910\|Ga0207684_10757450	Not Available	823	Open in IMG/M
3300025915\|Ga0207693_10135211	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1938	Open in IMG/M
3300027812\|Ga0209656_10321266	Not Available	711	Open in IMG/M
3300030854\|Ga0075385_11242814	Not Available	552	Open in IMG/M
3300031057\|Ga0170834_105648549	Not Available	856	Open in IMG/M
3300031090\|Ga0265760_10063452	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300031226\|Ga0307497_10419917	Not Available	643	Open in IMG/M
3300031231\|Ga0170824_111032230	Not Available	513	Open in IMG/M
3300031469\|Ga0170819_15319706	Not Available	892	Open in IMG/M
3300031545\|Ga0318541_10007951	All Organisms → cellular organisms → Bacteria → Acidobacteria	4629	Open in IMG/M
3300031545\|Ga0318541_10488384	Not Available	689	Open in IMG/M
3300031561\|Ga0318528_10599472	Not Available	591	Open in IMG/M
3300031573\|Ga0310915_10156697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1577	Open in IMG/M
3300031573\|Ga0310915_10368420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300031719\|Ga0306917_10011434	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5128	Open in IMG/M
3300031719\|Ga0306917_10075569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2349	Open in IMG/M
3300031720\|Ga0307469_10141981	All Organisms → cellular organisms → Bacteria → Acidobacteria	1781	Open in IMG/M
3300031744\|Ga0306918_10298699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300031754\|Ga0307475_10032035	All Organisms → cellular organisms → Bacteria → Acidobacteria	3828	Open in IMG/M
3300031768\|Ga0318509_10591891	Not Available	618	Open in IMG/M
3300031779\|Ga0318566_10189843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300031781\|Ga0318547_10475346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300031833\|Ga0310917_10358243	Not Available	990	Open in IMG/M
3300031879\|Ga0306919_11192870	Not Available	578	Open in IMG/M
3300031890\|Ga0306925_10234900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1977	Open in IMG/M
3300031910\|Ga0306923_11284381	Not Available	777	Open in IMG/M
3300031912\|Ga0306921_11890784	Not Available	639	Open in IMG/M
3300031945\|Ga0310913_10548137	Not Available	821	Open in IMG/M
3300031945\|Ga0310913_11187544	Not Available	531	Open in IMG/M
3300031954\|Ga0306926_11630938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300031962\|Ga0307479_10885363	Not Available	865	Open in IMG/M
3300032001\|Ga0306922_11583371	Not Available	652	Open in IMG/M
3300032025\|Ga0318507_10435707	Not Available	571	Open in IMG/M
3300032059\|Ga0318533_10800287	Not Available	692	Open in IMG/M
3300032076\|Ga0306924_10430193	Not Available	1509	Open in IMG/M
3300032091\|Ga0318577_10074095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300032180\|Ga0307471_100628110	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300032180\|Ga0307471_100726869	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1158	Open in IMG/M
3300032205\|Ga0307472_101362026	Not Available	686	Open in IMG/M
3300032955\|Ga0335076_10004794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13706	Open in IMG/M
3300033290\|Ga0318519_10777104	Not Available	588	Open in IMG/M
3300033402\|Ga0326728_10000014	All Organisms → cellular organisms → Bacteria → Acidobacteria	741953	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.04%
Host-Associated	Host-Associated	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.12%
Aquatic	Environmental → Aquatic	3.92%
Plants	Host-Associated → Plants	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.14%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Sediment	Environmental → Aquatic → Sediment	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.47%
Loam	Environmental → Terrestrial → Soil → Loam	14.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1007126194	3300000364	Soil	MSATIIHAEALPEANFPSGVDTHWETVNRTMWNEHERVREERELVYEISWIAELGVWRSFLRSQRRLSSWQ*
JGI1027J12803_1024550872	3300000955	Soil	MSATIIHAEALPEANFPSGVDTHWETVNRTMWNEHERVREERELVYEISWIAELGVWRS
Ga0062386_10000121112	3300004152	Bog Forest Soil	MAARITHAEAFFGAAFPVGINAHWEEEKRTVWNEQERANEERELIYEISWISELGVWRRFLRSQRMVKT*
Ga0066395_102697032	3300004633	Tropical Forest Soil	ASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0066388_1008356932	3300005332	Tropical Forest Soil	MLLSITHAEALLDATILSSGIDTHWVTKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNS*
Ga0070710_102972531	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSTSQ*
Ga0070711_1000587064	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSATIIHADALPEANFPTGVDTHWETVNRTMWNEHERVREERELVYEISWIAELGVWRSFLRSQRRVSSSQ*
Ga0070697_1007818311	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSSSQ*
Ga0066903_1003826223	3300005764	Tropical Forest Soil	VSASITHAEVLLGATLPSTGVDRLWVTNNRTVWNEQERVSEERELVYEISWTSKLGAWRSSCVHSEG*
Ga0066903_1018617801	3300005764	Tropical Forest Soil	MLLSITHAEALLDATILSSGIDMHWVTKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNS*
Ga0066903_1035158901	3300005764	Tropical Forest Soil	MSASITHAEALLGATFPSTGVDKHWVTNNRTVWNEQERVSEERELLYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0066903_1080755771	3300005764	Tropical Forest Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0070715_100695442	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MASSVPDKVPMSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSSSQ*
Ga0075014_1006292372	3300006174	Watersheds	MFASITHAEAFCGEAFPAGIDAHWEKENRTIWNEREHASEERELVYEISWISELGVWRRFLRSQRRVKT*
Ga0070712_1001217463	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLAARHKARNICRQLLVPMSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSSSQ*
Ga0075425_1000959424	3300006854	Populus Rhizosphere	MFASITHAEAFCGEAFPAGIDAHWEKENRTIWNEREHASEERELVYEISWISELGVWRRFLR*
Ga0075425_1004605962	3300006854	Populus Rhizosphere	MSATIIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSSSQ*
Ga0126374_103150722	3300009792	Tropical Forest Soil	VGSMTASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQKRVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0126373_100407306	3300010048	Tropical Forest Soil	MLVTPGPETIVTSGVVTMSGAIIHAEVLLDATFLSNGADTHWVTKNRTVWNELERVSEERELVYEISWVPELGAWRSFLCSQRRLVTVS*
Ga0126373_119915611	3300010048	Tropical Forest Soil	ARCPETIATSGVVGMSASITHAEALLGAMFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0126373_121343241	3300010048	Tropical Forest Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQR
Ga0074044_103464091	3300010343	Bog Forest Soil	MSASIIDGEALLGTPFPDRIDTYWETQNRTLWNEQESAFEERELVYEISWIPELDSWRRFLRCQRRRGGTQ*
Ga0126376_101315443	3300010359	Tropical Forest Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQKRVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0126372_131521812	3300010360	Tropical Forest Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRSVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0126378_117329801	3300010361	Tropical Forest Soil	SGVVTMSGAIIHAEVLLDATFLSNGADTHWVTKNRTVWNELERVSEERELVHEISWVPELGAWRSFLCSQRRLVTVS*
Ga0126378_126599961	3300010361	Tropical Forest Soil	EMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0126381_1002063226	3300010376	Tropical Forest Soil	MTASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQKRVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0126381_1012285442	3300010376	Tropical Forest Soil	MSASISHAEALLGAAFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRMSTSQ*
Ga0126381_1014437392	3300010376	Tropical Forest Soil	MSASITHAEALLGAMFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRSVSTTQ*
Ga0126381_1018914311	3300010376	Tropical Forest Soil	LDATILSSGIDTHWVTKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNS*
Ga0126383_100256072	3300010398	Tropical Forest Soil	MTASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ*
Ga0126383_100291862	3300010398	Tropical Forest Soil	MSLSITHAEALLDATILSSGIDMHWVTKNHTVWNERERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNS*
Ga0137363_102997731	3300012202	Vadose Zone Soil	MSASITHAEALLGAMFPAGTDTHWETENHKMWNEREHASEERELVYEISWISELGVWRRFLRSQRR
Ga0126369_102769452	3300012971	Tropical Forest Soil	MSLSITHAEALLDATILSSGVDTHWVTKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNS*
Ga0182036_103550561	3300016270	Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRR
Ga0182033_105003521	3300016319	Soil	VAMSGSITHAEALLDGTILSNGIDTHWVTKNHTVWNEQERVSEERELVYEISWMPELSAWRSFLRSQRRLVTNS
Ga0182035_100945185	3300016341	Soil	MSVSITQAEALLDATFLSSGIDTHWVTKNHTVWNEQERVSEERELVYEISWMPELSAWRSFLRSQRRLVTNS
Ga0182040_100704116	3300016387	Soil	PETIATSGVVGMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGAWRSFLRSERRVSKTQ
Ga0182040_110557541	3300016387	Soil	ALLDATFLSIGVHTHWITKNRTVWNERERVSEERELVYEISWIPELGAWRSFLRSQRRLVTSS
Ga0182037_105237902	3300016404	Soil	MSLSITHAEALLDATILSSGIDTYWETKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTSS
Ga0182037_116142062	3300016404	Soil	PETIATSGVVGMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ
Ga0182039_114765021	3300016422	Soil	MSGSITHAEALLDGTILSNGIDTHWVTKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTSS
Ga0187817_102204122	3300017955	Freshwater Sediment	MFASITHAEAFCGEAFPAGIDAHWEKENRTIWNEREHASEERELVYEIRWI
Ga0210407_106920561	3300020579	Soil	MSATVIHAEALPEANFPSGVDTHWETVNRTMWNEHDRVREERELVYEISWIAELGVWRSFLRSQRSVSTSQ
Ga0210403_109813931	3300020580	Soil	EGLLGATFPPGIDTHWETVNRKMWNERERDCEERELVYEISWIAELGVWRRFLRSQRKLT
Ga0210403_113474451	3300020580	Soil	MFASITHAEAFCGEAFPAGIDAHWEKENRTIWNEREPASEERELVYEISWISELGVWRHFLRSQRRVKT
Ga0210399_1000226913	3300020581	Soil	MSASATHAEGLLGATFPPGIDTHWETVNRKMWNERERDCEERELVYEISWIAELGVWRRFLRSQRKLTT
Ga0210395_108840501	3300020582	Soil	MSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVS
Ga0210406_106049472	3300021168	Soil	AARHKARNICRQLLVPMSATVIHAEALPEANFPSGVDTHWETVNRTMWNEHDRVREERELVYEISWIAELGVWRSFLRSQRRVSTSQ
Ga0210400_114952541	3300021170	Soil	MSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQ
Ga0210405_100988502	3300021171	Soil	MFASITHAEVFCGEAFPAGIDAHWEKENRTIWNEREHASEERELVYEISWISELGVWRRFLRSQRRVKT
Ga0210388_104167601	3300021181	Soil	MSATIIHADALPEANFPTGVDTHWETVNRTMWNEHERMREERELVYEISWIAELGVWRSFLRSQRRVSSSQ
Ga0210383_113800291	3300021407	Soil	MSATIIHADALPEANFPTGVDTHWETVNRTMWNEHERVREERELVYEISWIAELGVWRSF
Ga0210392_108387841	3300021475	Soil	MFASITHAEAFCGEAFPAGIDAHWEKENRTIWNEREHASEERELVYEISWISELGVWRHFLRSQRMVKT
Ga0126371_106358502	3300021560	Tropical Forest Soil	MSGSITHAEALLDTTFLSNGVDTHWVTENHTAWNEQERVSEERELVYEISWFPELGAWRSFLRSQRRLVTIS
Ga0126371_124062521	3300021560	Tropical Forest Soil	MSASITHAEALLGATFPSTGVDTQWVTNNRTLWNEQERVSEERELVYEISWIPELGAWRSFLRSQ
Ga0207685_106232622	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MASSVPDKVPMSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSTSQ
Ga0207699_102753282	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MASSVPDKVPMSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSSSQ
Ga0207684_107574501	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLR
Ga0207693_101352112	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLAARHKARNICRQLLVPMSATVIHAEALPEANFPSGVDTHWETVNRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSTSQ
Ga0209656_103212661	3300027812	Bog Forest Soil	MAARITHAEAFFGAAFPVGINAHWEEEKRTVWNEQERANEERELIYEISWISELGVWRRFLRSQRMVKT
Ga0075385_112428141	3300030854	Soil	MSATIIHADALPEANFPTGVETHWETVNRTMWNEHERVREERELVYEISWIAELGFWRSFLRSQRRVSSSQ
Ga0170834_1056485491	3300031057	Forest Soil	MSATIIHADALPEANFPTGVDTHWETVNRTMWNEHERVREERELVYEISWIAELGFWRSFLRSQRRVSSSQ
Ga0265760_100634522	3300031090	Soil	MFASTTHAEAFCGEAFPAGIDTHWEKENRTIWNEREHASEERELVYEISWISELGVWRGFLRSQRRVKTSASARLARRHCGPKCKVL
Ga0307497_104199171	3300031226	Soil	HAEALPEANFPRGVDTHWETINRTMWNERERVREERELVYEISWIAELGVWRSFLRSQRRVSSSQ
Ga0170824_1110322301	3300031231	Forest Soil	MFVSVTHTEAFYGEAFPAGIDAHWEKENRAIWNEWEHASEGRELVYEISWISELGVWRRFLRSQRRVKT
Ga0170819_153197061	3300031469	Forest Soil	MSATIFHAEALPEANFPSGVDTHWETVNRTMWNEHERVREERELVYEISWIAELGVWRSFLRSQRRVSSSQ
Ga0318541_100079515	3300031545	Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGAWRSFLRSERRVSKTQ
Ga0318541_102262832	3300031545	Soil	MLVTPGPETIVTSGVVRMSGAIIHAEVLLDATFLSNGADTHWVTKNRTVWNELERVSEERELVYEISWVPELGAWRSFLCSQRRLVTVS
Ga0318541_104883841	3300031545	Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ
Ga0318528_105994721	3300031561	Soil	MSLSITHAEALLDATILSSGIDTHWETKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNSSLLQD
Ga0310915_101566972	3300031573	Soil	MSGSITHAEALLDGTILSNGIDTHWVTKNHTVWNEQERVSEERELVYEISWMPELSAWRSFLRSQRRLVTNS
Ga0310915_103684202	3300031573	Soil	VEMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ
Ga0306917_100114343	3300031719	Soil	MSLSITHAEALLDATILSSGIDTHWETKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNSSLLQDRNSKVG
Ga0306917_100755696	3300031719	Soil	TIATSGVVGMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ
Ga0307469_101419813	3300031720	Hardwood Forest Soil	MFVSITHAEAFCGEAFPAGIDAHWEKENRTIWNEWEHASEERELVYEISWISELGVWRRFLRSQRRVKT
Ga0306918_102986992	3300031744	Soil	LLDGTILSNGIDTHWVTKNHTVWNEQERVSEERELVYEISWMPELSAWRSFLRSQRRLVTNS
Ga0307475_100320352	3300031754	Hardwood Forest Soil	MSATIIHPEDLREPTFPDGVDTHWETVNRTMWNQQERMSEERELVYETSWIAELGVWRGFLRSQRTLRACH
Ga0318509_105918911	3300031768	Soil	VSMSLSITHAEALLDATILSSGIDTYWETKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTSS
Ga0318546_113424171	3300031771	Soil	MLVTPGPETIVTSGVVRMSGAIIHAEVLLDATFLSNGADTHWVTKNRTVWNELERVSEERELVYEISWVPELGAWRS
Ga0318566_101898432	3300031779	Soil	AGRPETIATSGVVGMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGAWRSFLRSERRVSKTQ
Ga0318547_104753461	3300031781	Soil	VVGMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ
Ga0310917_103582431	3300031833	Soil	SGVVSMSLSITHAEALLDATILSSGIDTHWETKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNSSLLQDRNSKVG
Ga0306919_111928701	3300031879	Soil	AEALLDATFLSSGIDTHWVTKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNSSLLQDRNSKVG
Ga0306925_102349001	3300031890	Soil	MSGSITHVEALLDATFLSIGVHTHWITKNRTVWNERERVSEERELVYEISWIPELGAWRSFLRSQ
Ga0306923_112843811	3300031910	Soil	MSLSITHAEALLDATILSSGIDTHWETKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNS
Ga0306921_118907841	3300031912	Soil	MSVSITQAEALLDATFLSSGIDTHWVTKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTSS
Ga0310913_105481371	3300031945	Soil	MSVSITQAEALLDATFLSSGIDTHWVTKNHTVWNEQERVSEERELVYEISWIPELGAWRSFLRSQRRLVTNS
Ga0310913_111875442	3300031945	Soil	IATSGVVEMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFLRSQRRVSTTQ
Ga0306926_116309381	3300031954	Soil	ATSRVVWMSASIIHAEALPNVTFLGNVVDTHWVTKNHTVWNEQERVSEERELVYEISWMPELGAWRTFLRSQRRLLTR
Ga0307479_108853631	3300031962	Hardwood Forest Soil	MSATIIHPEDLREPTFPNGVDTHWETVNRTMWNQQERMSEERELVYEISWIAELGVWRSFLRSQRTLRACQ
Ga0306922_115833711	3300032001	Soil	MIHAEVLLDEAFLSNGVDTHWVTKNRTVWNEQERVSEERELVYEITWIPELGAWRSFLRSQRRLVTVS
Ga0318507_104357071	3300032025	Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGAWRSFLRSERRVSTTQ
Ga0318533_108002872	3300032059	Soil	STHAEALLGATFPSTGVDTHWVTANRTVWNELERVSEERELVYEISWIPELGAWRSFLRSQRRAGTSQ
Ga0306924_104301931	3300032076	Soil	MSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGVWRSFL
Ga0318577_100740951	3300032091	Soil	GVVEMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGAWRSFLRSERRVSKTQ
Ga0307471_1006281102	3300032180	Hardwood Forest Soil	MFVSITHTEAFCGEAFPAGIDAHWEKENRTIWNEWEHASEERELVYEISWISELGVWRRFLRSQRRKKT
Ga0307471_1007268693	3300032180	Hardwood Forest Soil	MSATVIHAEALPEANFPSGVDTHWETVNRTMWNEHERVREERELVYEISWIAELGVWRSFLRSQRRV
Ga0307472_1013620261	3300032205	Hardwood Forest Soil	MSSTIIHAEALPQATFPNGVDTHWKIVNRTIWNEHERVREERELVYEISWIAELGVWRSF
Ga0335076_100047949	3300032955	Soil	MSASITHAEALFGATFPTGIDTRWETENRRMWNEREHESEERELVYEISWISELGVWRRFLRSQRKIKT
Ga0318519_107771042	3300033290	Soil	LVAGRPETIATSGVVGMSASITHAEALLGATFPSTGVDTHWVTNNRTVWNEQERVSEERELVYEISWIPELGAWRSFLRSERRVSKTQ
Ga0326728_10000014189	3300033402	Peat Soil	MSASTIHAEALLGATFPAGIDTHWETENREMWNEQERTSEERELVYEISWISELGFWRRFLRSQRKVRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101990

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences