NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F101829

Metagenome Family F101829

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101829
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 60 residues
Representative Sequence MKRPAMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEADE
Number of Associated Samples 91
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 60.78 %
% of genes near scaffold ends (potentially truncated) 31.37 %
% of genes from short scaffolds (< 2000 bps) 86.27 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(8.823 % of family members)
Environment Ontology (ENVO) Unclassified
(53.922 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 26.37%    β-sheet: 0.00%    Coil/Unstructured: 73.63%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF00239Resolvase 41.18
PF01695IstB_IS21 25.49
PF13408Zn_ribbon_recom 8.82
PF07508Recombinase 1.96
PF00118Cpn60_TCP1 0.98
PF08483Obsolete Pfam Family 0.98
PF00665rve 0.98
PF13384HTH_23 0.98
PF12779WXXGXW 0.98
PF00872Transposase_mut 0.98
PF00069Pkinase 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 43.14
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 41.18
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 25.49
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.92
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.98
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.98
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.98
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.98
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.98
COG4584TransposaseMobilome: prophages, transposons [X] 0.98

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.33 %
UnclassifiedrootN/A16.67 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101100721All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300004480|Ga0062592_102360500All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae533Open in IMG/M
3300004643|Ga0062591_101361873All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300005328|Ga0070676_11031818All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae619Open in IMG/M
3300005329|Ga0070683_100092581All Organisms → cellular organisms → Bacteria2839Open in IMG/M
3300005335|Ga0070666_11396330All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300005445|Ga0070708_100188485Not Available1929Open in IMG/M
3300005532|Ga0070739_10029228All Organisms → cellular organisms → Bacteria4126Open in IMG/M
3300005542|Ga0070732_10020316All Organisms → cellular organisms → Bacteria3733Open in IMG/M
3300005617|Ga0068859_101078606All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae883Open in IMG/M
3300005712|Ga0070764_10726904All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae613Open in IMG/M
3300005841|Ga0068863_100255046All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1695Open in IMG/M
3300005844|Ga0068862_101761715All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae628Open in IMG/M
3300006028|Ga0070717_11314099All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300006059|Ga0075017_100789735All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae733Open in IMG/M
3300006162|Ga0075030_100023122All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5331Open in IMG/M
3300006169|Ga0082029_1404287All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1301Open in IMG/M
3300006237|Ga0097621_102197567All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae528Open in IMG/M
3300006358|Ga0068871_100819464All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae859Open in IMG/M
3300006755|Ga0079222_10694448All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300006871|Ga0075434_102037258All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300006904|Ga0075424_101259417All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300009093|Ga0105240_10003723All Organisms → cellular organisms → Bacteria → Acidobacteria23554Open in IMG/M
3300009093|Ga0105240_10085868All Organisms → cellular organisms → Bacteria3855Open in IMG/M
3300009094|Ga0111539_10040236All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5628Open in IMG/M
3300009143|Ga0099792_11120915All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300009162|Ga0075423_11890414All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300009176|Ga0105242_10790270Not Available938Open in IMG/M
3300009177|Ga0105248_10757767All Organisms → cellular organisms → Bacteria → Acidobacteria1095Open in IMG/M
3300009177|Ga0105248_10857819All Organisms → cellular organisms → Bacteria → Acidobacteria1025Open in IMG/M
3300009177|Ga0105248_11042595All Organisms → cellular organisms → Bacteria → Acidobacteria924Open in IMG/M
3300009177|Ga0105248_11457346All Organisms → cellular organisms → Bacteria → Acidobacteria775Open in IMG/M
3300009545|Ga0105237_11786962All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300009545|Ga0105237_11890190All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300009553|Ga0105249_10525650All Organisms → cellular organisms → Bacteria → Acidobacteria1231Open in IMG/M
3300010373|Ga0134128_12035371Not Available632Open in IMG/M
3300010376|Ga0126381_100469892All Organisms → cellular organisms → Bacteria → Acidobacteria1767Open in IMG/M
3300010396|Ga0134126_10669589Not Available1182Open in IMG/M
3300010400|Ga0134122_12725344All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300011119|Ga0105246_10664798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium909Open in IMG/M
3300012199|Ga0137383_11300949Not Available518Open in IMG/M
3300012357|Ga0137384_10520761All Organisms → cellular organisms → Bacteria975Open in IMG/M
3300012362|Ga0137361_11819645Not Available527Open in IMG/M
3300012925|Ga0137419_11006616Not Available691Open in IMG/M
3300012971|Ga0126369_13610515All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300013104|Ga0157370_10122656All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2426Open in IMG/M
3300013105|Ga0157369_10735754All Organisms → cellular organisms → Bacteria → Acidobacteria1015Open in IMG/M
3300013297|Ga0157378_10612769All Organisms → cellular organisms → Bacteria → Acidobacteria1101Open in IMG/M
3300013297|Ga0157378_13178216Not Available510Open in IMG/M
3300013308|Ga0157375_11242300All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300014325|Ga0163163_10336950All Organisms → cellular organisms → Bacteria → Acidobacteria1563Open in IMG/M
3300014326|Ga0157380_11551364Not Available717Open in IMG/M
3300014745|Ga0157377_11040208All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300014968|Ga0157379_11448188All Organisms → cellular organisms → Bacteria → Acidobacteria667Open in IMG/M
3300014969|Ga0157376_11650988All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300014969|Ga0157376_12573715Not Available549Open in IMG/M
3300015077|Ga0173483_10485851All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300015371|Ga0132258_10511831All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3004Open in IMG/M
3300015371|Ga0132258_13271857All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1116Open in IMG/M
3300015374|Ga0132255_101003056All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300018038|Ga0187855_10744365All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300018081|Ga0184625_10590534Not Available546Open in IMG/M
3300018083|Ga0184628_10698292All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300019361|Ga0173482_10032374All Organisms → cellular organisms → Bacteria → Acidobacteria1590Open in IMG/M
3300021180|Ga0210396_11483922All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300021384|Ga0213876_10132250All Organisms → cellular organisms → Bacteria → Acidobacteria1326Open in IMG/M
3300021401|Ga0210393_10435411All Organisms → cellular organisms → Bacteria1070Open in IMG/M
3300021405|Ga0210387_10273876All Organisms → cellular organisms → Bacteria1481Open in IMG/M
3300021407|Ga0210383_10247696All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1529Open in IMG/M
3300021407|Ga0210383_10258633All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300021477|Ga0210398_10156631Not Available1853Open in IMG/M
3300021478|Ga0210402_11921275Not Available518Open in IMG/M
3300025903|Ga0207680_11087628All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300025913|Ga0207695_10007961All Organisms → cellular organisms → Bacteria13367Open in IMG/M
3300025914|Ga0207671_11073576All Organisms → cellular organisms → Bacteria → Acidobacteria633Open in IMG/M
3300026078|Ga0207702_11735438All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae617Open in IMG/M
3300026088|Ga0207641_10895378All Organisms → cellular organisms → Bacteria → Acidobacteria881Open in IMG/M
3300027773|Ga0209810_1021783All Organisms → cellular organisms → Bacteria4140Open in IMG/M
3300027842|Ga0209580_10028484All Organisms → cellular organisms → Bacteria2527Open in IMG/M
3300027903|Ga0209488_11057606All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300027907|Ga0207428_10093893All Organisms → cellular organisms → Bacteria → Acidobacteria2326Open in IMG/M
3300027911|Ga0209698_10321014All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1222Open in IMG/M
3300029922|Ga0311363_10443569All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300029952|Ga0311346_11460676All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300030507|Ga0302192_10434452All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300031199|Ga0307495_10233537Not Available521Open in IMG/M
3300031366|Ga0307506_10074148All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1057Open in IMG/M
3300031716|Ga0310813_10566251All Organisms → cellular organisms → Bacteria → Acidobacteria1001Open in IMG/M
3300031740|Ga0307468_101413832All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300031996|Ga0308176_11159090Not Available819Open in IMG/M
3300032205|Ga0307472_101896561Not Available594Open in IMG/M
3300032261|Ga0306920_100957536All Organisms → cellular organisms → Bacteria → Acidobacteria1249Open in IMG/M
3300032770|Ga0335085_10057856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes5195Open in IMG/M
3300032783|Ga0335079_10492419All Organisms → cellular organisms → Bacteria1309Open in IMG/M
3300032828|Ga0335080_10254513All Organisms → cellular organisms → Bacteria → Acidobacteria1918Open in IMG/M
3300032828|Ga0335080_11835858All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300032829|Ga0335070_10999423All Organisms → cellular organisms → Bacteria → Acidobacteria772Open in IMG/M
3300032892|Ga0335081_12575909Not Available523Open in IMG/M
3300032955|Ga0335076_10535580All Organisms → cellular organisms → Bacteria → Acidobacteria1054Open in IMG/M
3300033158|Ga0335077_11570709All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300033158|Ga0335077_11774685All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300033412|Ga0310810_10299640All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1728Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil8.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.88%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere5.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere4.90%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.92%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.94%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.96%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.96%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.96%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.98%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.98%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.98%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.98%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.98%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027773Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030507Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10110072123300000364SoilPPMPTNMQFNLPLLDAPAAALPGNKKRELDLALVELLINAARESAVLPTQGDGNEPEADE
Ga0062592_10236050013300004480SoilMKRPAMSTNMQFNLPLLDVPAAALPANKQRELDPALVELLLSAARESAGQPAQGDGNEPEADE*
Ga0062591_10136187313300004643SoilMKRPAMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEADE*
Ga0070676_1103181813300005328Miscanthus RhizosphereMKRPAMPTNIQFNLPLLDVPATALPANKQRELDLALVEMLLNAARESAELPTQGDGNEPEADE*
Ga0070683_10009258133300005329Corn RhizosphereMKRPPTRTNMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARENANGLAQGGGSEPKADD*
Ga0070666_1139633023300005335Switchgrass RhizosphereMKRSAMPTNMQFNLPFLDVPAAALPVNKRRELDLALVELLLSAALESVGLPAQGEGNEPEAHE*
Ga0070708_10018848523300005445Corn, Switchgrass And Miscanthus RhizosphereMKRPAIHTNMQFNLPLPDAPAAALPDNKQRELDLALVELLISAARGSAGRPAQGGGNEPEVDN*
Ga0070739_1002922833300005532Surface SoilMKRPAVPTNMQFKLPLPDAPAAALPSDKQRELALALTELLLSAALGSNSRPGRGGRR*
Ga0070732_1002031633300005542Surface SoilMKRPATPTNLQFNLPLLDVPAATLPTNKQRELELALMELLLNAARERADLPAQGDGHEPEANQ*
Ga0068859_10107860623300005617Switchgrass RhizosphereRREWMKRPAMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEADE*
Ga0070764_1072690413300005712SoilMKRPVMPTNIQFNLPLLDEPATALPANKQRELDLALVELLLDAARESAGLPEQGDGNEPEADE*
Ga0068863_10025504613300005841Switchgrass RhizosphereMKRPATPTNMQFNLPLLDVPAAALPANKQRELELALVELLLNAARECAGLPAQGDGNEPETND*
Ga0068862_10176171513300005844Switchgrass RhizospherePQRREWMKRPAMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEADE*
Ga0070717_1131409933300006028Corn, Switchgrass And Miscanthus RhizosphereMQFNLPLLDVPAAALPANKQRELELALMELLINAACECAGLPAQGDGNEPEADE*
Ga0075017_10078973513300006059WatershedsMKRPAMPPNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESTGLPAQGDGNEPEADE*
Ga0075030_10002312223300006162WatershedsMKRPAMPPNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESASLPAQGDGNEPEADE*
Ga0082029_140428723300006169Termite NestVKRPAMLTNLQFKLPLPDAPAAALPSDKERELALALVELLLNAARGNHSHPKRGGGDEPEADE*
Ga0097621_10219756713300006237Miscanthus RhizosphereMKRPAMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEAHE*
Ga0068871_10081946413300006358Miscanthus RhizosphereMKRSAMPTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEAHE*
Ga0079222_1069444823300006755Agricultural SoilMKRPAIHTNMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARESVGRPAQGGGNEPEVDD*
Ga0075434_10203725813300006871Populus RhizosphereNLPLLDVPAAALPANKQRELELALMELLLNAARECAGLPAQGDGNEPETND*
Ga0075424_10125941723300006904Populus RhizosphereMKRPAMSTNMQFNLPLLDVPAAALPVNKRRELDLALVELLLSAAREGTGLPAQGEGNEPEADE*
Ga0105240_1000372343300009093Corn RhizosphereMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARENANGLAQGGGSEPKADD*
Ga0105240_1008586833300009093Corn RhizosphereMKRPAIPTNLQFNLPLPDAPAAALPGNKQRELDLALVELLISAARESAGRPAQGGGNEPEVDN*
Ga0111539_1004023653300009094Populus RhizosphereMPTNIQFNLPLLDVPATALPANKQRELDLALVEMLLNAARESAELPTQGDGNEPEADE*
Ga0099792_1112091513300009143Vadose Zone SoilDVPAAELPANKQRELALALVELLLNATRESAGLPAQGDGNEPEADE*
Ga0075423_1189041413300009162Populus RhizosphereMPTNMQFNLPLLDVPAAALPVNKRRELDLALVELLLSAAREGTGLPAQGEGNEPEADE*
Ga0105242_1079027023300009176Miscanthus RhizosphereMKRSAMPTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPETND*
Ga0105248_1075776723300009177Switchgrass RhizosphereMPTNMQFNLPFLDVPAAALPVNKRRELDLALVELLLSAALESVGLPAQGEGNEPEAHE*
Ga0105248_1085781923300009177Switchgrass RhizosphereMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQG
Ga0105248_1104259523300009177Switchgrass RhizosphereSAMPTNMQFNLPLLDVPAAALPVNKRRELDLALVELLLSAALESAGLPAQGEGNEPEADE
Ga0105248_1145734613300009177Switchgrass RhizosphereMQFNLPFLEASAAELPNNKQRELDLALVELLISAARENAARRSEGGENEPEVDE*
Ga0105237_1178696223300009545Corn RhizosphereMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARESVGRPAQGGGNEPEVDD*
Ga0105237_1189019023300009545Corn RhizosphereREWMKRPAIPTNLQFNLPLPDAPAAALPGNKQRELDLALVELLISAARESAGRPAQGGGNEPEVDN*
Ga0105249_1052565023300009553Switchgrass RhizosphereVNPQRREWMKRPAMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEADE*
Ga0134128_1203537123300010373Terrestrial SoilMQFNLPLPDAPAVALPFNKQRELELALVELLLSAARENADGLAQGGESEPKADD*
Ga0126381_10046989223300010376Tropical Forest SoilMKRPAMPTNIQFNLPLLEVPAAALPANKQRELDLALMELLLNAARESTSLPAQGDGNEREADE*
Ga0134126_1066958933300010396Terrestrial SoilMQFTLPLPDAPAAAIPSDKQRELALALVELLLSAVRGSESRSRRGACDEPE
Ga0134122_1272534413300010400Terrestrial SoilTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPETND*
Ga0105246_1066479813300011119Miscanthus RhizospherePQRREWMKRSAMPTNMQFNLPFLDVPAAALPVNKRRELDLALVELLLSAALESVGLPAQGEGNEPEADK*
Ga0137383_1130094913300012199Vadose Zone SoilMMKRPAKPTSPQLNLALVDVPAAAVPGNKQRELAVALVELLMSAARESVVRPTNGGGDE
Ga0137384_1052076113300012357Vadose Zone SoilMMKRPAKPTSPQLNLALVDVPAAAVPGNKQRELAVALVELLMSAARESVVRPTNGGGDEPEADR*
Ga0137361_1181964513300012362Vadose Zone SoilMKRSAMPTNMQFNLPLLDVPAAALPVNKRRELDLALVELLLSAARESAGQPAQGDGNEPEADK*
Ga0137419_1100661613300012925Vadose Zone SoilMQFNLPLLDVPAAALPTNKQRELELALMELLLNAARECADLPAQGDGNEPEADE*
Ga0126369_1361051523300012971Tropical Forest SoilMQLNLLLPDAPAAALPGNKQRELDLALVELLVSAARESAGRPAQGGGNEPEVDD*
Ga0157370_1012265633300013104Corn RhizosphereMKRPAMPLNMQFALPLPNAPAAAIPSDKQRELSLALVELLLSAARESEGCSRQGAGA*
Ga0157369_1073575413300013105Corn RhizosphereNLPLPDAPAAALPGNKQRELDLALVELLISAARESAGRPAQGGGNEPEVDN*
Ga0157378_1061276923300013297Miscanthus RhizosphereMQFNLPLLDVPAAALPANKQRELELALMELLLNAARECAGLPAQGDGNEPETND*
Ga0157378_1317821613300013297Miscanthus RhizosphereMPTNMQFNLPLLDVPAAALPVNKRRELDLALVELLLSAALESAGLPAQGEGNEPEAHE*
Ga0157375_1124230013300013308Miscanthus RhizosphereMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEADE*
Ga0163163_1033695013300014325Switchgrass RhizosphereVNPQRREWMKRSAMPTNMQFNLPFLDVPAAALPVNKRRELDLALVELLLSAALESVGLPAQGEGNEPEAHE*
Ga0157380_1155136413300014326Switchgrass RhizosphereMPTNIQFNLPLLDVPATALPANKQRELDLALVELLLSAARESAGQPAQGDRNEPEADQ*
Ga0157377_1104020813300014745Miscanthus RhizosphereMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGSEPEADE*
Ga0157379_1144818813300014968Switchgrass RhizosphereLLDVPATALPANKQRELDLALVEMLLNAARESAELPTQGDGNEPEADE*
Ga0157376_1165098823300014969Miscanthus RhizosphereMQFNLPFLEAPAAELPNNKQRELDLALVELLISAARENTARRSEGGENEPEVDE*
Ga0157376_1257371523300014969Miscanthus RhizosphereMQFNLPLLDVPAAALPTNKQRELELALMELLINAARECAGLPAQGDGNEPETND*
Ga0173483_1048585113300015077SoilNPQRREWMKRPAMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESTGLPAQGDENELEADD*
Ga0132258_1051183123300015371Arabidopsis RhizosphereMQFNLPLLDVPAAALPVNKQRELELALMELLLNAARECAGLPAQGDGNEPETND*
Ga0132258_1327185723300015371Arabidopsis RhizosphereMQFNLPLPDVPTAALPVNKQRELELALVELLLSAARECVGVQAQGDGNEPEADE*
Ga0132255_10100305623300015374Arabidopsis RhizosphereMKRPVTPTNMQFNLPLPDVPAAALPVNKQRELELALVELLLSAARECVGVQAQGDGNEPEADE*
Ga0187855_1074436513300018038PeatlandLLLPDAPAASLPGDKRQELILALAEMLLSAVRESAGQPAIGGSDESETE
Ga0184625_1059053423300018081Groundwater SedimentMKRPPMPTNMQFNLPLLDAPAAALPGNKKRELDLALVELLINAARESAVLPTQGDGNEPEADK
Ga0184628_1069829213300018083Groundwater SedimentMKRPGIHTNMQFNLPLPDAPAAALPRNKQRELDLALVELLLSAARESTGRPAQGGGNEPEVDD
Ga0173482_1003237423300019361SoilMKRPAMSTNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESAGQPAQGDGNEPEADE
Ga0210396_1148392213300021180SoilAIRTNMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARENVGSPAQGGKSEPKADE
Ga0213876_1013225023300021384Plant RootsMKRSAIRPNMQFNLPLPDAPTAALPVNKQRELDLALIELLLSAARENAGGPAQGGGSESKADE
Ga0210393_1043541123300021401SoilMKRPATPTNMQFNLPLLDVPAAALPANKQRELELALMELLLNAARECAGLPAQGDGNEPEANE
Ga0210387_1027387633300021405SoilMKRPATPTNLQFNLPLLDVPAATLPTNKQRELELALMELLLNAARECADLPAQGDGHEPEANQ
Ga0210383_1024769623300021407SoilMKRPAIRTNMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARENVGSPAQGGKSEPKADE
Ga0210383_1025863323300021407SoilMKRPAMRTNMQFNLPLPEPPAAVLPGNKQRELDLALVELLLSAARGNAGGPAQGGGSESKADK
Ga0210398_1015663123300021477SoilRTNMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARENVGSPAQGGKSEPKADE
Ga0210402_1192127513300021478SoilMKRPAMRTNMQFNLPLPEPPAAVLPGNKQRELDLALVELLLSAARGNAGGPA
Ga0207680_1108762823300025903Switchgrass RhizosphereMKRSAMPTNMQFNLPFLDVPAAALPVNKRRELDLALVELLLSAALESVGLPAQGEGNEPEAHE
Ga0207695_10007961133300025913Corn RhizosphereMKRPPTRTNMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARENANGLAQGGGSEPKADD
Ga0207671_1107357623300025914Corn RhizosphereMKRPAIHTNMQFNLPLPDAPAAALPGNKQRELDLALVELLLSAARESVGRPAQGGGNEPEVDN
Ga0207702_1173543813300026078Corn RhizosphereFLVPAAALPANKQRELELALMELLLNAAREFAGLPAQGDGNEPETND
Ga0207641_1089537823300026088Switchgrass RhizosphereMKRSAMPTNMQFNLPFLDVPAAALPVNKRRELDLALVELLLSAALESVGLPAQGEGNEPEADK
Ga0209810_102178333300027773Surface SoilMKRPAVPTNMQFKLPLPDAPAAALPSDKQRELALALTELLLSAALGSNSRPGRGGRR
Ga0209580_1002848423300027842Surface SoilMKRPATPTNLQFNLPLLDVPAATLPTNKQRELELALMELLLNAARERADLPAQGDGHEPEANQ
Ga0209488_1105760613300027903Vadose Zone SoilDVPAAELPANKQRELALALVELLLNATRESAGLPAQGDGNEPEADE
Ga0207428_1009389333300027907Populus RhizosphereMKRPAMPTNIQFNLPLLDVPATALPANKQRELDLALVEMLLNAARESAELPTQGDGNEPEADE
Ga0209698_1032101423300027911WatershedsMKRPAMPPNMQFNLPLLDVPAAALPANKQRELDLALVELLLSAARESASLPAQGDGNEPEADE
Ga0311363_1044356913300029922FenMQFNLPLLDVPAAALPANKQRELELALMELLLNAAREYAGLPAQGDGNEPEAND
Ga0311346_1146067623300029952BogRRERMKRPATPTNMQFNLPLLDVPAAALPANKQRELELALMELLLNAAREYAGLPAQGDGNEPEAND
Ga0302192_1043445213300030507BogMKRPATPTNMQFNLPLLDVPAAALPANKQRELELALMELLLNAAREYAGLPAQGDGNEPEAND
Ga0307495_1023353713300031199SoilMKRSAMPTNMQFNLPLLDVPAAALPVNKRRELDLALVELLLSAALESAGLPA
Ga0307506_1007414823300031366SoilMKRSAMPTNMQFNLPLLDVPAAALPVNKRRELDLALVELLLSAALESAGLPAQGEGNEPEAHE
Ga0310813_1056625123300031716SoilMKRPVTPTNMQFNLPLPDVPTAALPVNKQRELELALVELLLSAARECVGVQAQGDGNEPEADE
Ga0307468_10141383223300031740Hardwood Forest SoilTNMQFNLPLLDAPAAALPGNKKRELDLALVELLINAARESAVLPTQGDGNEPEADE
Ga0308176_1115909013300031996SoilMKRPTIHTIMQFNLPLPDAPAAALPGNKQRELDLALVELLVNAARESVGRPAQGGGNEP
Ga0307472_10189656123300032205Hardwood Forest SoilMKRPAIRTNMQFNLPLPDAPAAALPGNKQRELDLALVELLISAARESGGRPGQGGGNEPEVDN
Ga0306920_10095753613300032261SoilMKRPAIRTNMQFNLPLPDAPATALPGNKQKELDLALVELLLSAARENAGGLPQEGESESKADE
Ga0335085_1005785633300032770SoilMKRPAMRTNMQFNLPLPEAPAAVLPGNKQRELDLALVELLLSAARGNAGGPAQGGGSESKADE
Ga0335079_1049241923300032783SoilMKRPAMRTNMQFNLPLPDAPAAALPGNKQRELDLALVELLRSAARENVGSPAQGGKSEPKADE
Ga0335080_1025451323300032828SoilMKRPAIRTNMQFNLPLPDAPAAALPGNKQRELDLALVELLRSAARENVGSPAQGGKSEPKADE
Ga0335080_1183585823300032828SoilMKRPAMRTNMQFNLPLPDAPAAVLPGDKQRELDLALVELLLSAARGNAGGSAQ
Ga0335070_1099942323300032829SoilTNMQFNLPLLDVPAAALPANKQRELELALMELLLNAARECAGLPAQGDGNEPEADE
Ga0335081_1257590923300032892SoilMKRPAMPTTMQFNLPLLDVPAAELPANKQSELDLALVELLLSAARESVGLPTQGDGNEPEADE
Ga0335076_1053558023300032955SoilMKRPAMRTNMQFNLPLPDAPAAVLPGDKQRELDLALVELLLSAARGNAGGSAQGGGSESKADE
Ga0335077_1157070923300033158SoilMKRPAIRTNMQFNLPLPDAPAAALPGNTQRELDLALVELLRSAARENVGSPAQGGKSEPKADE
Ga0335077_1177468513300033158SoilMKRPAMRTNMQFNLPLPEAPAAVLPGNKQRELDLALVELLLSAARGNAGGSAQGGGSESKADE
Ga0310810_1029964023300033412SoilMKRPAMSTNMQFNLPLLDVPAAALPADKQRELDLALVELLLSAARESAGQPAQGDRNEPEADQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.