Metagenome Family F101731

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101731
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	66 residues
Representative Sequence	MPLEHEMAEPLIGHHFFLHADNPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQETP
Number of Associated Samples	93
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.61 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (68.627 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.745 % of family members)
Environment Ontology (ENVO)	Unclassified (43.137 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.941 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.65% β-sheet: 25.00% Coil/Unstructured: 54.35%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02826	2-Hacid_dh_C	23.53
PF00899	ThiF	17.65
PF05237	Obsolete Pfam Family	7.84
PF04392	ABC_sub_bind	5.88
PF03401	TctC	2.94
PF06035	Peptidase_C93	0.98
PF13437	HlyD_3	0.98
PF12849	PBP_like_2	0.98
PF00389	2-Hacid_dh	0.98
PF06764	DUF1223	0.98
PF00378	ECH_1	0.98
PF01471	PG_binding_1	0.98
PF01042	Ribonuc_L-PSP	0.98
PF13683	rve_3	0.98
PF06347	SH3_4	0.98
PF12760	Zn_Tnp_IS1595	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.88
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.94
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.98
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.63 %
Unclassified	root	N/A	31.37 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.63 %
Unclassified	root	N/A	31.37 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.63 %
Unclassified	root	N/A	31.37 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.75 %
Unclassified	root	N/A	31.37 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.84 %
Unclassified	root	N/A	31.37 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	40.20 %
Unclassified	root	N/A	31.37 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.92 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.37 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	8.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.96 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.98 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.37 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	8.82 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.96 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.98 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.37 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	8.82 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	1.96 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.37 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5.88 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	2.94 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	1.96 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Rhizobium freirei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei	0.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.37 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5.88 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	2.94 %
Methylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	1.96 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.96 %
Rhizobium freirei PRF 81	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	0.98 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_103587184	Not Available	536	Open in IMG/M
3300002568\|C688J35102_120936814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2591	Open in IMG/M
3300004062\|Ga0055500_10159758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	538	Open in IMG/M
3300004114\|Ga0062593_100020694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3467	Open in IMG/M
3300004153\|Ga0063455_100424241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	795	Open in IMG/M
3300004156\|Ga0062589_102339461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300004157\|Ga0062590_100544509	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300004479\|Ga0062595_100227033	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300004479\|Ga0062595_102113375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300005093\|Ga0062594_102858951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300005336\|Ga0070680_100707916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	867	Open in IMG/M
3300005338\|Ga0068868_100417850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1161	Open in IMG/M
3300005355\|Ga0070671_100145190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2003	Open in IMG/M
3300005365\|Ga0070688_100567190	Not Available	865	Open in IMG/M
3300005367\|Ga0070667_100296232	All Organisms → cellular organisms → Bacteria → Proteobacteria	1456	Open in IMG/M
3300005435\|Ga0070714_102077544	Not Available	554	Open in IMG/M
3300005451\|Ga0066681_10589613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	685	Open in IMG/M
3300005456\|Ga0070678_101694412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	595	Open in IMG/M
3300005526\|Ga0073909_10666572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300005719\|Ga0068861_102070101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	569	Open in IMG/M
3300005764\|Ga0066903_100924405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1582	Open in IMG/M
3300005834\|Ga0068851_10361526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300005842\|Ga0068858_100657384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1019	Open in IMG/M
3300006051\|Ga0075364_10605391	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300006173\|Ga0070716_100885783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300006791\|Ga0066653_10305530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300006854\|Ga0075425_101964410	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300006854\|Ga0075425_102895747	Not Available	526	Open in IMG/M
3300006881\|Ga0068865_102085255	Not Available	515	Open in IMG/M
3300009098\|Ga0105245_12302883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	592	Open in IMG/M
3300009143\|Ga0099792_10637841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300009174\|Ga0105241_10848702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	845	Open in IMG/M
3300009610\|Ga0105340_1168712	Not Available	910	Open in IMG/M
3300010036\|Ga0126305_10809807	Not Available	637	Open in IMG/M
3300010044\|Ga0126310_10324183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1070	Open in IMG/M
3300010045\|Ga0126311_10290808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1227	Open in IMG/M
3300010371\|Ga0134125_11475714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	741	Open in IMG/M
3300010397\|Ga0134124_12957176	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300010399\|Ga0134127_11872310	Not Available	677	Open in IMG/M
3300010400\|Ga0134122_10498935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1101	Open in IMG/M
3300010403\|Ga0134123_11169556	Not Available	797	Open in IMG/M
3300011419\|Ga0137446_1069546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300011443\|Ga0137457_1318912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	530	Open in IMG/M
3300012206\|Ga0137380_10941235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	741	Open in IMG/M
3300012207\|Ga0137381_10079923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2745	Open in IMG/M
3300012212\|Ga0150985_112620832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1270	Open in IMG/M
3300012357\|Ga0137384_10913181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	707	Open in IMG/M
3300012363\|Ga0137390_11631201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	582	Open in IMG/M
3300012683\|Ga0137398_10984424	Not Available	585	Open in IMG/M
3300012893\|Ga0157284_10101073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	753	Open in IMG/M
3300012899\|Ga0157299_10149315	Not Available	659	Open in IMG/M
3300012913\|Ga0157298_10174516	Not Available	666	Open in IMG/M
3300012917\|Ga0137395_10683737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	742	Open in IMG/M
3300012923\|Ga0137359_10606354	Not Available	960	Open in IMG/M
3300012924\|Ga0137413_10735917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	752	Open in IMG/M
3300012925\|Ga0137419_11087740	Not Available	665	Open in IMG/M
3300012929\|Ga0137404_12150342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	521	Open in IMG/M
3300012951\|Ga0164300_11006768	Not Available	536	Open in IMG/M
3300012960\|Ga0164301_11823918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp.	512	Open in IMG/M
3300012961\|Ga0164302_10222784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1178	Open in IMG/M
3300012987\|Ga0164307_11418287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	585	Open in IMG/M
3300013306\|Ga0163162_12407132	Not Available	605	Open in IMG/M
3300014262\|Ga0075301_1048502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	813	Open in IMG/M
3300014311\|Ga0075322_1117471	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300014326\|Ga0157380_10403994	Not Available	1297	Open in IMG/M
3300015245\|Ga0137409_11398245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300015371\|Ga0132258_10935511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2189	Open in IMG/M
3300015371\|Ga0132258_13724667	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300015372\|Ga0132256_100723335	Not Available	1111	Open in IMG/M
3300015372\|Ga0132256_102599061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	607	Open in IMG/M
3300015373\|Ga0132257_102269444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	703	Open in IMG/M
3300015373\|Ga0132257_103228660	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300015374\|Ga0132255_101538702	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300017792\|Ga0163161_10937242	Not Available	736	Open in IMG/M
3300017944\|Ga0187786_10471724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	562	Open in IMG/M
3300018067\|Ga0184611_1295291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300018067\|Ga0184611_1317544	Not Available	539	Open in IMG/M
3300018071\|Ga0184618_10100300	Not Available	1134	Open in IMG/M
3300018429\|Ga0190272_12602658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300019362\|Ga0173479_10529768	Not Available	601	Open in IMG/M
3300021082\|Ga0210380_10011844	Not Available	3649	Open in IMG/M
3300025315\|Ga0207697_10173524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	943	Open in IMG/M
3300025938\|Ga0207704_11817124	Not Available	524	Open in IMG/M
3300025939\|Ga0207665_11329198	Not Available	573	Open in IMG/M
3300025961\|Ga0207712_10634315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	927	Open in IMG/M
3300025981\|Ga0207640_10840985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	798	Open in IMG/M
3300026095\|Ga0207676_10095009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2457	Open in IMG/M
3300026118\|Ga0207675_101517249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	691	Open in IMG/M
3300026121\|Ga0207683_11734233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	574	Open in IMG/M
3300027866\|Ga0209813_10041154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 81	1407	Open in IMG/M
3300027866\|Ga0209813_10320165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	607	Open in IMG/M
3300027903\|Ga0209488_10092506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2260	Open in IMG/M
3300027915\|Ga0209069_10308247	Not Available	842	Open in IMG/M
3300028380\|Ga0268265_10391870	Not Available	1281	Open in IMG/M
3300028380\|Ga0268265_11764169	Not Available	625	Open in IMG/M
3300031446\|Ga0170820_16010337	Not Available	535	Open in IMG/M
3300031716\|Ga0310813_10883778	Not Available	809	Open in IMG/M
3300031716\|Ga0310813_11515334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	625	Open in IMG/M
3300031854\|Ga0310904_11105833	Not Available	568	Open in IMG/M
3300032421\|Ga0310812_10490531	Not Available	553	Open in IMG/M
3300032770\|Ga0335085_11619736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	670	Open in IMG/M
3300034149\|Ga0364929_0161277	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.69%
Host-Associated	Host-Associated	34.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.86%
Plants	Host-Associated → Plants	34.31%
Aquatic	Environmental → Aquatic	8.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.80%
Sediment	Environmental → Aquatic → Sediment	6.86%
Roots	Host-Associated → Plants → Roots	2.94%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Marine	Environmental → Aquatic → Marine	0.98%
Floodplain	Environmental → Terrestrial → Floodplain	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.73%
Loam	Environmental → Terrestrial → Soil → Loam	8.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.92%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.94%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.94%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.94%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014262	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1035871842	3300001431	Soil	MPLEHEMAEPLSGHHFFLHTXXXXXXXXXXDTKGDQRWYLMTRESLLALS
C688J35102_1209368142	3300002568	Soil	MPLEHEMAEPLTGHHFFLHADNPRLGILRLDTKNDQRWLLVTHQSLLALSEACARHARELQETP*
Ga0055500_101597581	3300004062	Natural And Restored Wetlands	MPLEFEMAEPLTGHHFFLHQDDPGLGILRLDTRGDQRCFLVTRKDLLALAKACAGY
Ga0062593_1000206943	3300004114	Soil	MPLEHEIADLLTGHHFFLHQENPSLGILRLDTKGDQRWWLVTRKDLAALSEACAKYAEELQDAD*
Ga0063455_1004242411	3300004153	Soil	MTLRVSGDVIMPLEHEMAEPLIGCHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0062589_1023394611	3300004156	Soil	LIYLTQQAWHESEAVSMGAVTMPLEHEMAELLTGHHFFLHSENPGLGILRLDAKGDQRWWLVTRQDLLALSEACAKYADELQDARS*
Ga0062590_1005445092	3300004157	Soil	MPLEHEMAEPLSGHHFFLHTKNPRVGILRLDTKGDQRWYLMTRESLLALSAACATHAKELQE*
Ga0062595_1002270331	3300004479	Soil	MGDIAMPLEHEMAELLTGYMFFLHPSDSRLGILRLDTRGQPVWVQVNRPGLLALAAACTKHAAELQE
Ga0062595_1021133751	3300004479	Soil	MPLEHEMAEPLTGLHFFLHAERPDLGILRLETKSDQRWLLVTRQSLLALSEACAKHAEELQEIK*
Ga0062594_1028589511	3300005093	Soil	MPLEHEMADFLTGHHFFLHQDNPRLGILRLDTKGDQRWWLVTRKDLIALSEACAKYAEELQDAD*
Ga0070680_1007079162	3300005336	Corn Rhizosphere	MPLEHEMAELLTGHHFFLHAENPSLGILRLDTKSDQRWLLMTRQSLLALSEACARHAEELQDAR*
Ga0068868_1004178502	3300005338	Miscanthus Rhizosphere	MTLRVSGDLIMPLEHEMAEPLIGYHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0070671_1001451902	3300005355	Switchgrass Rhizosphere	MTLRVSGDVIMPLEHEMAEPLIGYHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0070688_1005671902	3300005365	Switchgrass Rhizosphere	MPLEHEMADFLTGHHFFLHQDNPRLGILRLDTKGDQRWWLVTRKDLIALSEACAKYAE
Ga0070667_1002962321	3300005367	Switchgrass Rhizosphere	MPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACARHAEELQETP*
Ga0070714_1020775442	3300005435	Agricultural Soil	MPLEHELAEPLTGHHFFLHADKPDLGILRLDTKSDQRWLLMTRQSLLALSEACARHAEELQETP*
Ga0066681_105896132	3300005451	Soil	MPLEHEIAEPLTGHHFFLHAENPGVGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0070678_1016944122	3300005456	Miscanthus Rhizosphere	MPLEHEMAELLTGHHFFLHAENPSLGILRLDTKSDRRWLLMTRKSLLALSEACARHAEELQEAR*
Ga0073909_106665722	3300005526	Surface Soil	MPLEHEMAEPLTGHHFFLHADNPGLGILRLDTKNDQRWLLVTRQSLLALSEACVRHAEELQERP*
Ga0068861_1020701011	3300005719	Switchgrass Rhizosphere	MPLEHEMAELLTGHHFFLHAENPSLGILRLDTKSDQRWLLMTRQSLLALSEACARHAEELQEAR*
Ga0066903_1009244052	3300005764	Tropical Forest Soil	MGAVTMPLEHEMAELLTGHHFFLHSENPGLGILRLDAKGDQRWWLVTRQDLLALSKACAKYADELQEARS*
Ga0068851_103615262	3300005834	Corn Rhizosphere	MTLSVSGDVIMPLEHEMAEPLIGYHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0068858_1006573842	3300005842	Switchgrass Rhizosphere	MPLEHEMAEPLIGYHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0075364_106053912	3300006051	Populus Endosphere	MPLEHEMAEPLTGHHFFLHAERPDLGILRLETKSDQRWLLMTRQSLLALSEACAKHAEELQETK*
Ga0070716_1008857832	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPLEHELAEPLTGHHFFLHADKPDLGILRLDTKSDQRWLLMTRQSLLALSEACARHAEELQERP*
Ga0066653_103055302	3300006791	Soil	MPLEHEMAEPLIGHHFFLHADNPRLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQETP*
Ga0075425_1019644101	3300006854	Populus Rhizosphere	HRLCIQDGHDAKMASDPGDGAMPLEHEMADALTGHHFFLHQDNPKLGILRLDAKGDQRWWLVNRCDLLALSEACARYAAELQEAD*
Ga0075425_1028957471	3300006854	Populus Rhizosphere	MPLEHEMAEPLIGHHFFLHADNPRLGILRLDTKNDQRWLLMTRQSLLALSEACARHAEELQERP*
Ga0068865_1020852551	3300006881	Miscanthus Rhizosphere	MPLEHEMADFLTGHHFFLHQDNPRLGILRLDTKGDQRWWLVTRKDLIALSEA
Ga0105245_123028831	3300009098	Miscanthus Rhizosphere	MQSIAGDVTMPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACARHAEELQETP*
Ga0099792_106378411	3300009143	Vadose Zone Soil	MPLEHEMAEPLTGHHFFLHAENPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQERP*
Ga0105241_108487021	3300009174	Corn Rhizosphere	AQTGGQPVAGDVAMPLEHEMAEPLIGHHFFLHAENPRLGILRLDTRNDQRWLLMTRQSLLALSQACARHAEELQETP*
Ga0105340_11687121	3300009610	Soil	MQSIAGDVTMPLEHEMAEPLIGHHFFLHAENADLGILRLDTKNDQRWLLVTRQSLLALSEACARHADELQETP*
Ga0126305_108098072	3300010036	Serpentine Soil	MPLEHEMAEPLAGHHFFLHQDNPSVGILRLDTKNDQRWLLVTRKSLLALSEACAKHAEELQEIQ*
Ga0126310_103241832	3300010044	Serpentine Soil	MQSIAGDVAMPLEHEMAEPLIGHHFFLHAENADLGILRLDTKNDQRWLLVTRQSLLALSEACARHADELQETP*
Ga0126311_102908082	3300010045	Serpentine Soil	MPLEHEMAEPLIGHHFFLHAENADLGILRLDTKNDQRWLLVTRQSLLALSEACARHADELQETP*
Ga0134125_114757142	3300010371	Terrestrial Soil	MPIEFEMAELLTGHQFFLHTERADVGVLRVDTRSEQRCFLVTRKGLLALSEACARYAEELQDAR*
Ga0134124_129571761	3300010397	Terrestrial Soil	MGAVTMPLEHEMAELLTGHHFFLHSENPGLGILRLDANDDRRWWLVTRQDLLALSKACAKYADELQDVRS*
Ga0134127_118723102	3300010399	Terrestrial Soil	MPLEHEMAEPLSGHHFFLHTENPRVGILRLDTKGDQRWYLMTRESLLALSAACATHAKELQE*
Ga0134122_104989352	3300010400	Terrestrial Soil	MQSIAGDVTMPLEHEMADPLIGHHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0134123_111695562	3300010403	Terrestrial Soil	MQSIAGDVTMPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLITRQSLLALSEACARHAEELQETP*
Ga0137446_10695461	3300011419	Soil	MPLEHEMAELLTGYHFFLHPENPTLGILRLDTKGDQRWLLVTRKGLLALSDACAKHAKELTEVQ*
Ga0137457_13189121	3300011443	Soil	MPLEHEMAELLTGHHFFLHAENPSLGILRLETKSDQRWLLMTRKSLLALSEACARHAEELQEAR*
Ga0137380_109412352	3300012206	Vadose Zone Soil	MPLEHEMAEPLTGHHFFLHAENPKFGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQETP*
Ga0137381_100799232	3300012207	Vadose Zone Soil	MPLEHEMAEPLTGHHFFLHAENPKFGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQERP*
Ga0150985_1126208322	3300012212	Avena Fatua Rhizosphere	MPLEHEMADVLTGHHFFLHQDNPSLGILRLDTKDDQRWWLVTRKSLLALSEACAKHAEELAEVH*
Ga0137384_109131812	3300012357	Vadose Zone Soil	MPLEHEMAEPLTGHHFFLHAENPKFGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQEMP*
Ga0137390_116312012	3300012363	Vadose Zone Soil	CFDAQAGGQPVAGDPAMPLEHEMAEPLIGHHFFLHADNPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQETP*
Ga0137398_109844242	3300012683	Vadose Zone Soil	MPLEHEMAEPLTGHHFFLHAENPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQATP*
Ga0157284_101010732	3300012893	Soil	MQSIAGDVTMPLEHEMADPLIGHHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSQACARHAEELQETP*
Ga0157299_101493152	3300012899	Soil	MQSIAGDVTMPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0157298_101745162	3300012913	Soil	MQSIAGDVTMPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACAR
Ga0137395_106837372	3300012917	Vadose Zone Soil	MPLEHEMAEPLIGHLFFLHADNPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQETP*
Ga0137359_106063542	3300012923	Vadose Zone Soil	MPLEHEMAEPLIGHHFFLHADNPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQERP*
Ga0137413_107359172	3300012924	Vadose Zone Soil	MPLEHEMAEPLTGHHFFLHAENPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQKTP*
Ga0137419_110877402	3300012925	Vadose Zone Soil	MPLEHEMAEPLIGHHFFLHADNPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQETP*
Ga0137404_121503422	3300012929	Vadose Zone Soil	MTLSVLFGRVAMPLEHEMAEPLTGHHFFLHAENPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQATP*
Ga0164300_110067681	3300012951	Soil	MQSIEGEVTMPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACARHAEELQETP*
Ga0164301_118239181	3300012960	Soil	MQSIAGDVTMPLEHEMADPLIGHHFFLHAENPGLGILRLDTKNDQRWLLMTRQSLLALSQACARHAEELQETP*
Ga0164302_102227841	3300012961	Soil	GMTLRVSGDVIMPLEHEMAEPLIGYHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP*
Ga0164307_114182871	3300012987	Soil	MQSIAGDVTMPLEHEMAYPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACARHAEELQETP*
Ga0163162_124071322	3300013306	Switchgrass Rhizosphere	MQSIAGDVTMPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACARH
Ga0075301_10485022	3300014262	Natural And Restored Wetlands	MPLEFEMAELLAGHHFFLHQEERGLGILRLDTRGDQRCFLVTRESLLALAEACTRYAEELQ*
Ga0075322_11174712	3300014311	Natural And Restored Wetlands	MPLEFEMAESLTGHHFFLHQENPDLGILRFDSKDDQRCFLVTRKDLLALSEACAKYAEELR*
Ga0157380_104039942	3300014326	Switchgrass Rhizosphere	MADFLTGHHFFLHQDNPRLGILRLDTKGDQRWWLVTRKDLIALSEACAKYAEELQDAD*
Ga0137409_113982452	3300015245	Vadose Zone Soil	LGHQHEMAEPLIGHHFFLHADNPGLGILRLDTKNDQRWLLVTRQSLLALSEACARHAEELQETP*
Ga0132258_109355111	3300015371	Arabidopsis Rhizosphere	MAELLTGHHFFLHGENPGLGILRLDAKDDRRWWLVTRQDLLALSKACAKYAEELQDIRS*
Ga0132258_137246672	3300015371	Arabidopsis Rhizosphere	MGVVTMPLEHEMAELLTGHHFFLHSENPGLGILRLDAKGDQRWWLVTRQDLLVLSKACAKYADELQHARS*
Ga0132256_1007233352	3300015372	Arabidopsis Rhizosphere	MPLEHEMAELLTGHHFFLHSENPGLGILRLDAKGDRRWWLVTRQDLLALSKAC
Ga0132256_1025990612	3300015372	Arabidopsis Rhizosphere	MQSIAGDVTMPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLLSEACARYAEELQETP*
Ga0132257_1022694442	3300015373	Arabidopsis Rhizosphere	MGAVTMPLEHEMAELLTGHHFFLHSENPGLGILRLDAKDDRRWWLVTRQDLLALSNACAKYADELQDVRS*
Ga0132257_1032286602	3300015373	Arabidopsis Rhizosphere	MPLEHEMAELLTGHHFFLHSENPALGILRLDAKGDQRWWLVTRQDLLALSKACAKYADELQEAS*
Ga0132255_1015387021	3300015374	Arabidopsis Rhizosphere	EMAELLTGHHFFLHSENPGLGILRLDAKGDQRWWLVTRQDLLVLSKACAKYADELQHARS
Ga0163161_109372421	3300017792	Switchgrass Rhizosphere	MTLRVSGDVIMPLEHEMAEPLIGYHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP
Ga0187786_104717242	3300017944	Tropical Peatland	MPLEHEMAELLTGHHFFLHAENPSLGILRLDTKGDQRWFLMTRKNLLALSEACARHAEELQEA
Ga0184611_12952912	3300018067	Groundwater Sediment	MPLEHEMAEPLIGHHFFLHAENADLGILRLDTKNDQRWLLVTRQSLLALSEACARHADELQETP
Ga0184611_13175441	3300018067	Groundwater Sediment	MPLEHEMAEPLAGHHFFLHQDNPSVGILRLDTKNDQRWLLVTRKSLLALSEACAKHAEELQEIQ
Ga0184618_101003002	3300018071	Groundwater Sediment	MPLEHEMAEPLVGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSEACARH
Ga0190272_126026581	3300018429	Soil	MPVEHEMAEPLTGSHFFLHADDPAVGILRLDTKSDQRWLLMTRKSLLALSDACARHAQELRETNSGRSDSSG
Ga0173479_105297683	3300019362	Soil	MPLEHEMADFLTGLHFFLHQENPRLGILRLDTKGDQRWWLVTRKDLVALSKACAKYAKELEDAD
Ga0210380_100118448	3300021082	Groundwater Sediment	MPLEHEMADFLTGHHFFLHQDNPRLGILRLDTKGDQRWWLVTRKDLIALSEACAKYAEELQDAD
Ga0207697_101735242	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACARHAEELQETP
Ga0207704_118171243	3300025938	Miscanthus Rhizosphere	MPLEHEMADFLTGHHFFLHQDNPRLGILRLDTKGDQRWWLVTRKDLIALSEACAK
Ga0207665_113291981	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPLEHEMAEPLIGYHFFLHADNPELGILRLDTKNDQRWLLMTRQSLLALSEACTKHAE
Ga0207712_106343152	3300025961	Switchgrass Rhizosphere	MPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLRMTRLRLLLSEACARYAEELQETP
Ga0207640_108409852	3300025981	Corn Rhizosphere	LIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACARHAEELQETP
Ga0207676_100950091	3300026095	Switchgrass Rhizosphere	MPLEHEMADPLIGHHFFLHADNPGLGILRLDTKNDQRWLLMTRQSLLALSQACARH
Ga0207675_1015172492	3300026118	Switchgrass Rhizosphere	MPLEHEMAELLTGHHFFLHAENPSLGILRLDTKSDQRWLLMTRQSLLALSEACARHAEELQEAR
Ga0207683_117342332	3300026121	Miscanthus Rhizosphere	GDVAMPLEHEMAELLTGHHFFLHAENPSLGILRLDTKSDRRWLLMTRKSLLALSEACARHAEELQEAR
Ga0209813_100411541	3300027866	Populus Endosphere	MPLEHEMAEPLTGLHFFLHAERPDLGVLRLETKSDQRWLLMTRQSLLALSAACAKHADEL
Ga0209813_103201652	3300027866	Populus Endosphere	MPLEHEMAEPLTGHHFFLHAERPDLGILRLETKSDQRWLLVTRQSLLALSEACAKHAEELQETK
Ga0209488_100925062	3300027903	Vadose Zone Soil	MPLEHEMAEPLTRHHFFLHAENPGLGILRLDTKNDQRWLLVTRQSLLALSEACARNAEELQKTP
Ga0209069_103082472	3300027915	Watersheds	MPLEHEMAELLTGHHFFLHAENPSLGILRLDTKNDQRWLLMTRKSLLALSEACARHAEELQEAR
Ga0268265_103918701	3300028380	Switchgrass Rhizosphere	MPLEHEMAEPLTGHHFFLHAENPGLGILRLDTKNDQRWLLVTRQSLLALSEACA
Ga0268265_117641692	3300028380	Switchgrass Rhizosphere	MPLEHEMAEPLSGHHFFLHTKNPRVGILRLDTKGDQRWYLMTRESLLALSAACATHAKELQE
Ga0170820_160103371	3300031446	Forest Soil	MPLEHEMAEPLTGHHFFLHGEKPGLGILRLDTKSDQRWLLMTRESLLALSDACARHAEELQETR
Ga0310813_108837781	3300031716	Soil	MPLEHEMAGLLTGHHFFLHSENPALGILRLDAKGDQRWWLVTRKDLLALSEACVKYAAELREAD
Ga0310813_115153342	3300031716	Soil	MGAVTMPLEHEMAELLTGHHFFLHSENPGLGILRLDANDDRRWWLVTRQDLLALSKACAKYADELQDIMS
Ga0310904_111058331	3300031854	Soil	MPLEFEVAEPLAGHHFFLHKEKASLGILRLDTKGDQRCFLVTRTDLLTLSKACAKYAKELRGAE
Ga0310812_104905312	3300032421	Soil	MPLEHEMAEPLIGQHFFLHADNPRLGILRLDTKNDQRWLLMTRQSLLALSEACAKHAEELQETP
Ga0335085_116197362	3300032770	Soil	MPLEHEMAEPLVDHHFFLHADDPRLGILRLSTKSDQRWYLMTRESLLALAEACARHAEELQASR
Ga0364929_0161277_15_197	3300034149	Sediment	MAELLTGHHFFLHSENPGLGILRLDAKSDRRWWLVTRQDLLALSKACAKYAEELQEANPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101731

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences