Metagenome / Metatranscriptome Family F101721

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101721
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	67 residues
Representative Sequence	YLPVKSVTNTKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVATGDVTAWRIPR
Number of Associated Samples	92
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	98.04 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.843 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (27.451 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.157 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.14% β-sheet: 14.94% Coil/Unstructured: 60.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00535	Glycos_transf_2	25.49
PF13641	Glyco_tranf_2_3	6.86
PF08240	ADH_N	2.94
PF00196	GerE	0.98
PF00392	GntR	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
All Organisms	root	All Organisms	42.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
cellular organisms	root	All Organisms → cellular organisms	42.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	10.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.94 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	9.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	2.94 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.98 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	9.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.94 %
Klenkia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia	0.98 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	9.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	2.94 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.98 %
Klenkia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia soli	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.84 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	9.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.84 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.90 %
Frankia sp. Iso899	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	1.96 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.98 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.98 %
Klenkia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia soli	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E01DHO9A	Not Available	515	Open in IMG/M
3300005174\|Ga0066680_10917933	Not Available	518	Open in IMG/M
3300005175\|Ga0066673_10318902	Not Available	907	Open in IMG/M
3300005180\|Ga0066685_10940453	Not Available	575	Open in IMG/M
3300005353\|Ga0070669_100640248	Not Available	894	Open in IMG/M
3300005434\|Ga0070709_10848739	Not Available	719	Open in IMG/M
3300005434\|Ga0070709_11054196	Not Available	649	Open in IMG/M
3300005435\|Ga0070714_100419475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1267	Open in IMG/M
3300005445\|Ga0070708_102099606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Klenkia → Klenkia soli	522	Open in IMG/M
3300005456\|Ga0070678_101767855	Not Available	582	Open in IMG/M
3300005468\|Ga0070707_100580357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1083	Open in IMG/M
3300005518\|Ga0070699_101289623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	670	Open in IMG/M
3300005530\|Ga0070679_101511128	Not Available	618	Open in IMG/M
3300005545\|Ga0070695_101100652	Not Available	650	Open in IMG/M
3300005577\|Ga0068857_101963550	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300005578\|Ga0068854_100380897	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300005712\|Ga0070764_10755008	Not Available	602	Open in IMG/M
3300006173\|Ga0070716_101023007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	654	Open in IMG/M
3300006175\|Ga0070712_100877795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	772	Open in IMG/M
3300006755\|Ga0079222_11258940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	669	Open in IMG/M
3300006804\|Ga0079221_11614691	Not Available	525	Open in IMG/M
3300009137\|Ga0066709_104083355	Not Available	531	Open in IMG/M
3300009143\|Ga0099792_10586354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300009698\|Ga0116216_10145966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1454	Open in IMG/M
3300010048\|Ga0126373_10796002	Not Available	1007	Open in IMG/M
3300010373\|Ga0134128_12914868	Not Available	527	Open in IMG/M
3300010375\|Ga0105239_10713411	Not Available	1147	Open in IMG/M
3300010379\|Ga0136449_101753145	Not Available	932	Open in IMG/M
3300010396\|Ga0134126_10838718	Not Available	1037	Open in IMG/M
3300010396\|Ga0134126_11281466	Not Available	812	Open in IMG/M
3300012202\|Ga0137363_10972818	Not Available	721	Open in IMG/M
3300012203\|Ga0137399_10473864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1048	Open in IMG/M
3300012203\|Ga0137399_11659615	Not Available	527	Open in IMG/M
3300012206\|Ga0137380_10310559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1411	Open in IMG/M
3300012209\|Ga0137379_10753681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	879	Open in IMG/M
3300012209\|Ga0137379_11266082	Not Available	644	Open in IMG/M
3300012350\|Ga0137372_10261453	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300012360\|Ga0137375_10829024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	741	Open in IMG/M
3300012473\|Ga0157340_1002379	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300012951\|Ga0164300_10031207	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300012984\|Ga0164309_10664482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	822	Open in IMG/M
3300013104\|Ga0157370_10995406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300013296\|Ga0157374_10776563	Not Available	973	Open in IMG/M
3300013307\|Ga0157372_10154111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	2653	Open in IMG/M
3300013308\|Ga0157375_13460163	Not Available	525	Open in IMG/M
3300014168\|Ga0181534_10859635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300015374\|Ga0132255_103204587	Not Available	697	Open in IMG/M
3300018044\|Ga0187890_10419100	Not Available	751	Open in IMG/M
3300018433\|Ga0066667_12005922	Not Available	532	Open in IMG/M
3300018468\|Ga0066662_11636821	Not Available	672	Open in IMG/M
3300021180\|Ga0210396_10325642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1358	Open in IMG/M
3300021432\|Ga0210384_10861884	Not Available	805	Open in IMG/M
3300021475\|Ga0210392_10199745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1395	Open in IMG/M
3300021560\|Ga0126371_12982075	Not Available	573	Open in IMG/M
3300021560\|Ga0126371_13672698	Not Available	518	Open in IMG/M
3300022467\|Ga0224712_10218482	Not Available	872	Open in IMG/M
3300025898\|Ga0207692_10940705	Not Available	569	Open in IMG/M
3300025904\|Ga0207647_10225596	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300025910\|Ga0207684_11519413	Not Available	544	Open in IMG/M
3300025915\|Ga0207693_10735606	Not Available	763	Open in IMG/M
3300025920\|Ga0207649_10430615	Not Available	992	Open in IMG/M
3300025922\|Ga0207646_10587033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1001	Open in IMG/M
3300025932\|Ga0207690_10697789	Not Available	834	Open in IMG/M
3300025939\|Ga0207665_10798109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300025986\|Ga0207658_10341431	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300026095\|Ga0207676_10215497	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300026490\|Ga0257153_1080810	Not Available	652	Open in IMG/M
3300026550\|Ga0209474_10327748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	877	Open in IMG/M
3300026555\|Ga0179593_1133139	All Organisms → cellular organisms → Bacteria	3015	Open in IMG/M
3300027855\|Ga0209693_10288439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300027903\|Ga0209488_10428026	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300028718\|Ga0307307_10027273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	1608	Open in IMG/M
3300028784\|Ga0307282_10655837	Not Available	509	Open in IMG/M
3300028828\|Ga0307312_10266491	Not Available	1111	Open in IMG/M
3300028885\|Ga0307304_10037780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Iso899	1733	Open in IMG/M
3300029636\|Ga0222749_10570210	Not Available	617	Open in IMG/M
3300031680\|Ga0318574_10947489	Not Available	504	Open in IMG/M
3300031708\|Ga0310686_100247323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1142	Open in IMG/M
3300031708\|Ga0310686_105486376	Not Available	584	Open in IMG/M
3300031736\|Ga0318501_10814431	Not Available	517	Open in IMG/M
3300031744\|Ga0306918_10879645	Not Available	698	Open in IMG/M
3300031779\|Ga0318566_10279253	Not Available	827	Open in IMG/M
3300031782\|Ga0318552_10336991	Not Available	768	Open in IMG/M
3300031796\|Ga0318576_10122900	Not Available	1199	Open in IMG/M
3300031796\|Ga0318576_10513430	Not Available	565	Open in IMG/M
3300031845\|Ga0318511_10453583	Not Available	591	Open in IMG/M
3300031942\|Ga0310916_11507847	Not Available	548	Open in IMG/M
3300032001\|Ga0306922_12187063	Not Available	534	Open in IMG/M
3300032010\|Ga0318569_10150660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1070	Open in IMG/M
3300032044\|Ga0318558_10236946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300032066\|Ga0318514_10630887	Not Available	570	Open in IMG/M
3300032090\|Ga0318518_10513357	Not Available	613	Open in IMG/M
3300032180\|Ga0307471_102631850	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300032205\|Ga0307472_100347859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1216	Open in IMG/M
3300032205\|Ga0307472_100717978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	901	Open in IMG/M
3300032205\|Ga0307472_101736072	Not Available	618	Open in IMG/M
3300032261\|Ga0306920_103172818	Not Available	616	Open in IMG/M
3300032261\|Ga0306920_103888208	Not Available	544	Open in IMG/M
3300032782\|Ga0335082_11634375	Not Available	517	Open in IMG/M
3300032828\|Ga0335080_11823779	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300032897\|Ga0335071_11603541	Not Available	595	Open in IMG/M
3300033289\|Ga0310914_10884020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.31%
Host-Associated	Host-Associated	15.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.35%
Plants	Host-Associated → Plants	15.69%
Aquatic	Environmental → Aquatic	1.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.86%
Freshwater	Environmental → Aquatic → Freshwater	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.76%
Loam	Environmental → Terrestrial → Soil → Loam	17.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_06369900	2189573000	Grass Soil	NATGNLPVKSVTNTKMREQIRAWKVSAVVAVAAPGSRLGRYLTAILGSPAVATGDVTAWRFPAR
Ga0066680_109179331	3300005174	Soil	TKMREQIRAWKVSAVVAVATPGSRLARYLTAILGSPAVVTVDVMAWRVPPR*
Ga0066673_103189024	3300005175	Soil	TDTKMREQIRAWKVSAVVAVATPGSQLGRYLTALLGSPAVVTADVMAWRVPPR*
Ga0066685_109404532	3300005180	Soil	NKMLEQIRAWKVSAVVAVATPGSRLGRYLTALLGSPAVVAGDVTAWRTPASLR*
Ga0070669_1006402482	3300005353	Switchgrass Rhizosphere	NARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVAPPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0070709_108487392	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FSQAGRPQAAGGRAPNARPSATGNLPVKSVTNTKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0070709_110541961	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	APGARSGATGYLQVKSVTNAKMREQIRAWKVSAVVAVATPGSQLGRYLTAILGSPAVVTADVMAWRVLPR*
Ga0070714_1004194751	3300005435	Agricultural Soil	VKSVTNTKMREQIRAWKVSAVVAVATPSSRLGRYLTALLGSPAVVTTGVMAWRTPAR*
Ga0070708_1020996061	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AGGVAPNARSGATGSLPVKSVTNTKMRAQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVATGDVTAWRVPAR*
Ga0070678_1017678552	3300005456	Miscanthus Rhizosphere	GRTPNARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVAPPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0070707_1005803571	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ARPGPTGNLPVKSVTSTKMREQISAWRVSAVVAVATPGSRLGRYLTAILGSPAVVTGDVMAWRIPPR*
Ga0070699_1012896231	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	TGYLQVKSVTNAKMREQIRAWTVSAVVAVATPGSQLGRYLTAILGSPAVVTADVMAWRVSPR*
Ga0070679_1015111281	3300005530	Corn Rhizosphere	PPQPAGGRTPNARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0070695_1011006521	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LQVKSVTNAKMREQIRAWTVSAVVAVATPGSQLGRYLTAILGSPAVVTADVMAWRVSPR*
Ga0068857_1019635501	3300005577	Corn Rhizosphere	KSVTNTTMREQIRAWKVSAVVAVAPPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0068854_1003808971	3300005578	Corn Rhizosphere	VKSVTNTKMREQIRAWKVSAVVAVATPGSQLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0070764_107550081	3300005712	Soil	KALTGGIPPNAYRGSAGYVPVKVVTDTKMWEQIKAWRVSAVVAVAELNSRLGQYLTVLLGRPAVVAGDVLAWRTSAK*
Ga0070716_1010230071	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	YLPVKSVTNTTMREQIRAWKVSAVVAVAPPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0070712_1008777951	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TNAKMREQIRAWKVSAVVAVATPGSQLGRYLTAILGSPAVVTADVMAWRVSSR*
Ga0079222_112589401	3300006755	Agricultural Soil	KSVTSTKMREQIRAWQVSAVVAVTTPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0079221_116146911	3300006804	Agricultural Soil	AGGRAPNAPPSATGSLPVKSVTSTKMREQIRAWKVSAVVAVTTPGSRLGRYLTAILGSPAVVTGDMTAWRIPR*
Ga0066709_1040833552	3300009137	Grasslands Soil	YLPVKSVTNTTMREQIRAWKVSAVVAVTTPGSQLARYLTAILGSPAVVTADVMAWRVSPR
Ga0099792_105863543	3300009143	Vadose Zone Soil	YLQVKSVTNAKMREQIRAWKVSAVVAVATPGSRLARYLTAILGSPAVVTADVMAWRVSPR
Ga0116216_101459661	3300009698	Peatlands Soil	GYVPVKAVTDIKMREQIRAWRVSAVVAVTKPGSRLGRYLTFILGPPAVVAGDVLAWRASSDNTRLYDDYLSE*
Ga0126373_107960021	3300010048	Tropical Forest Soil	AAPPDAYPGRAGYVQVRSVTNTRMLEQIRAWRVSAVVAVAKPGTRLGRYLTGLLGPPAVVTGDVTAWRTPSSLR*
Ga0134128_129148682	3300010373	Terrestrial Soil	VKSVTNTKMREQIRAWNVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0105239_107134113	3300010375	Corn Rhizosphere	YLQVKSVTNAKMREQIRAWTVSAVVAVATPGSQLGRYLTAILGSPAVVTADVMAWRVSPR
Ga0136449_1017531451	3300010379	Peatlands Soil	PVTYPQMLKQIRAWRVSAVVAVAKPDSGLGLYLKVLLGPPTVVAGDVLAWRTSVKLPSAIR*
Ga0134126_108387181	3300010396	Terrestrial Soil	GGRTPNARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0134126_112814661	3300010396	Terrestrial Soil	GGRTPNARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVAPPGSRLGRYLTAILGSPAVAAADVTAWRIPR*
Ga0137363_109728181	3300012202	Vadose Zone Soil	PREAGGTAPNARPSATGNLPVRSVTNAKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVVTADVMAWRVSPR*
Ga0137399_104738641	3300012203	Vadose Zone Soil	PSAGAAPNARSGSTGNLPVKSVTSTKMREQISAWKVSAVVAVATPGSRLGRYLTAILGSPAVVTGGVMAWRIPPR*
Ga0137399_116596151	3300012203	Vadose Zone Soil	GSAAPAAGAAPNGGSGATGYLQVKSVTNAKMREQIRAWKVSAVVAVATPGSRLARYLTAILGSPAVVTADVMAWRVSPR*
Ga0137380_103105591	3300012206	Vadose Zone Soil	AGAPAGGPASPSARSGATGYRQVKSVTDTKMREQIRAWKVSAVVAVATPGSQLSRYLTAILGSPAVVKADVMAWRVPPR*
Ga0137379_107536813	3300012209	Vadose Zone Soil	GATGYRQVKSVTDTKMREQIRAWKVSAVVAVATPGSQLSRYLTAILGSPAVVKADVMAWRVPPR*
Ga0137379_112660821	3300012209	Vadose Zone Soil	KSVTNTKMREQIRAWKVSAVVAVATPGSRLARYLTAILGSPAVVTADVMAWRIPAR*
Ga0137372_102614534	3300012350	Vadose Zone Soil	VPAKTVTDTPMRKQIRAWQVSAVVAVARPDSRLGRYLTTLLGAPAVVTGDVIAWRIPPR*
Ga0137375_108290241	3300012360	Vadose Zone Soil	PNARPNATGNLPVKSVTNTKMREQIRAWKVSAVVAVAAPGSRLGRYLTAILGSPAVATGDVTAWRIPR*
Ga0157340_10023791	3300012473	Arabidopsis Rhizosphere	QAGPPQAGRPRAAGGYAPNARPNATGNLPVKSVTNTKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0164300_100312071	3300012951	Soil	TSPSARSGATGYLQVKSVTNAKMREQTRAWTVSAVVAVATPGSQLGRYLTAILGSPAVVTADVMAWRVSPR*
Ga0164309_106644823	3300012984	Soil	TNTKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0157370_109954061	3300013104	Corn Rhizosphere	RPNATGYLPVKSVTNTKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGAVTAWRIPR*
Ga0157374_107765633	3300013296	Miscanthus Rhizosphere	PPQPAGGRTPNARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVAPPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0157372_101541111	3300013307	Corn Rhizosphere	GKVPNARPNATGNLPVKSVTNTKMQEQIRAWKVSAVVAVAAPDSRLGRYLTAILGSPAVATGDVTAWRIPR*
Ga0157375_134601632	3300013308	Miscanthus Rhizosphere	PVKSVTNTTMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR*
Ga0181534_108596352	3300014168	Bog	RAQIRAWRVTAVVAVAKPGSVLGRYLTALLGAPAAAAGDVLAWRVSPAGAALSRVG*
Ga0132255_1032045871	3300015374	Arabidopsis Rhizosphere	ALAAGAPPDAHPGSAGYVQVKSVTNTRMREQIRAWRVSAVVAVAKPGTRLGRYLTDLLGPPAVVTGNVTAWRTPPSLR*
Ga0187890_104191002	3300018044	Peatland	PVKPVTYSQMLKQIWAWRVSAVVAVAKPDSGLGLYLKVLLGPPTVVTGDVIAWRAPAK
Ga0066667_120059221	3300018433	Grasslands Soil	GVVAPNARSGATGSLPVKSVTNNKMLEQIRAWKVSAVVAVATPGSRLGRYLTALLGSPAVVAGDVMAWRTPASLR
Ga0066662_116368213	3300018468	Grasslands Soil	GEPAAGPAAGAASPNAGSDATGYLPVKSVTNTTMREQIRAWKVSAVVAVTTPGSQLARYLTAILGSPAVVTADVMAWRVSPR
Ga0210396_103256421	3300021180	Soil	AGGTAPNVHPGAVGSLPAKSVTNAKMRKQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVVTGDVMAWRTSASLR
Ga0210384_108618841	3300021432	Soil	NTKMREQISAWKVSAVVAVAAPASRLGRYLTAILGSPAVVTGDVMAWRIPPR
Ga0210392_101997453	3300021475	Soil	AGAAGASATGNLPVKAVTNTKMREQIKAWKVSAVVAVATPGSQLGRYLTAILGSPAVVAGDVMAWRFPARLR
Ga0126371_129820752	3300021560	Tropical Forest Soil	SVTNTRMLEQIRAWRVSAVVAVAKPGTRLGRYLTGLLGPPAVVTGDVTAWRTPSSLR
Ga0126371_136726981	3300021560	Tropical Forest Soil	PVKSVTNAEMVRQITAWRVSAVVAVAKPDSRLAKYLTILLGRPTIAVGDVIAWRA
Ga0224712_102184821	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LPVKSVTNTTMREQIRAWKVSAVVAVAPPGSRLGRYLTAILGSPAVAAGDVTAWRIPR
Ga0207692_109407051	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GAAGASAPGNLPVKSVTNTKMREQIRAWKVSAVVAVATPSSRLGRYLTALLGSPAVVTTGVMAWRTPAR
Ga0207647_102255961	3300025904	Corn Rhizosphere	GPPQPAGGRTPNARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR
Ga0207684_115194132	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NARPNATGYLPVKSVTNTTMREQIKAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR
Ga0207693_107356061	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TNAKMREQIRAWKVSAVVAVATPGSQLGRYLTAILGSPAVVTADVMAWRVSSR
Ga0207649_104306151	3300025920	Corn Rhizosphere	VFSQAVPPQPAGGRTPNARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVAPPGSRLGRYLTAILGSPAVAAGDVTAWRIPR
Ga0207646_105870333	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GPPAAGAPTARPGPTGNLPVKSVTSTKMREQISAWRVSAVVAVATPGSRLGRYLTAILGSPAVVTGDVMAWRIPPR
Ga0207690_106977893	3300025932	Corn Rhizosphere	AGGRTPNARPNATGYLPVKSVTNTTMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR
Ga0207665_107981091	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	YAPNARSDAGGHLPVKSVTNTKMREQISAWKVSAVVAVAAPASRLGRYLTAILGSPAVVTGDVMAWRIPPR
Ga0207658_103414311	3300025986	Switchgrass Rhizosphere	WVFSQAGRPQATGGRAPNARPSATGNLPVKSVTNTGMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR
Ga0207676_102154971	3300026095	Switchgrass Rhizosphere	LPVKSVTNTTMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR
Ga0257153_10808101	3300026490	Soil	GAPSAGAAPNARSGSTGNLPVKSVTSTKMREQISAWKVSAVVAVATPGSRLGRYLTAILGSPAVVTGDVMAWRIPPR
Ga0209474_103277483	3300026550	Soil	SLPVKSVTNNKMLEQIRAWKVSAVVAVATPGSRLGRYLTALLGSPAVVAGDVMAWRTPASLR
Ga0179593_11331391	3300026555	Vadose Zone Soil	NLPVRSVTNAKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAIGDVTAWRIPR
Ga0209693_102884391	3300027855	Soil	NAYRGSAGYVPVKVVTDTKMREQIKAWRVSAVVAVAELNSRLGQYLTVLLGRPTVVAGDVLAWRTSAK
Ga0209488_104280263	3300027903	Vadose Zone Soil	AGAAPNGGSGATGYLQVKSVTNAKMREQIRAWKVSAVVAVATPGSRLARYLTAILGSPAVVTADVMAWRVSPR
Ga0307307_100272733	3300028718	Soil	YLPVKSVTNTKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVATGDVTAWRIPR
Ga0307282_106558372	3300028784	Soil	VTNAKMREQIRAWRVSAVVAVAAPGSRLGRYLTAILGSPAVATGDVTAWRVPAR
Ga0307312_102664911	3300028828	Soil	SVTNAKMREQIRAWRVSAVVAVAAPGSRLGRYLTAILGSPAVATGDVTAWRVPAR
Ga0307304_100377803	3300028885	Soil	GKAPNAPPSATGYLPVKSVTNTKMREQIRAWKVSAVVAVATPDSRLGRYLTAILGSPAVATGDVTAWRIPR
Ga0222749_105702102	3300029636	Soil	SGATGLLPVKSVTNTKMRAQIRAWKVSAVVAVATPGSQLSRYLTAILGSPAVVTADVMAWRVPAR
Ga0318574_109474891	3300031680	Soil	ARPGAAGYVPVKSVTNTAMRAQIRAWRVSAVVAVARPGTRLVSYLTILLGTPAVETGDVTAWRTPPSLR
Ga0310686_1002473232	3300031708	Soil	TPPNAYQGSAGYVPVKVVTDTKMREQIKAWRVSAVVAVAELNSRLGQYLTALLGRPAVVAGNVLAWRTPVK
Ga0310686_1054863762	3300031708	Soil	VPVKVVTDTKMREQIKAWRVSAVVAVAELNSRLGHYLTALLGRPAVVAGDVLAWRTSAK
Ga0318501_108144311	3300031736	Soil	HPGAAGYVPVRSVTNTAMRAQIRAWRVSAIVAVARPGTRLVRYLTILLGTPAVETGDVTAWRIPPSLR
Ga0306918_108796451	3300031744	Soil	GTTGYVPVKSVTNTKMRKQIRAWRVSAVVAVTKPGTRLARYLTDLLGKPAVTTGDVIAWRIPARLR
Ga0318566_102792533	3300031779	Soil	YVPVRSVTNTAMRAQIRAWRVSAIVAVARPGTRLVRYLTILLGTPAVETGDVTAWRIPPSLR
Ga0318552_103369911	3300031782	Soil	ALAAGSPPNARPGAAGYVPVKSVTNTAMRAQIRAWRVSAIVAVARPGTRLVSYLTILLGTPAVETGDVTAWRTPPGLR
Ga0318576_101229001	3300031796	Soil	TKMRKQIRAWRVSAVVAVTKPGTRLARYLTDLLGKPAVTTGDVIAWRIPARLR
Ga0318576_105134302	3300031796	Soil	LPASVRPGSPAYVPVKLVTDTRMRAQIRAWRVSAVVAVARPDSTLGRYLSALLGPPSVVTGDVLAWRLPAMPDK
Ga0318511_104535831	3300031845	Soil	NTAMRAQIRAWRVSAIVAVARPGTRLVRYLTILLGTPAVETGDVTAWRIPPSLR
Ga0310916_115078471	3300031942	Soil	GAAGYVPVKSVTNTAMRAQIRAWRVSAVVAVARPGTRLVSYLTILLGTPAVETGDVTAWRTPPSLR
Ga0306922_121870631	3300032001	Soil	LAAGSPPNAHPGAAGYVPVRSVTNTAMRAQIRAWRVSAIVAVARPGTRLVRYLTILLGTPAVETGDVTAWRIPPSLR
Ga0318569_101506601	3300032010	Soil	NARPGAAGYVPVKSVTNTAMRAQIRAWRVSAVVAVARPGTRLVSYLTILLGTPAVETGDVTAWRTPPSLR
Ga0318558_102369463	3300032044	Soil	SQQGLPRPLAAGSPPNAHPGAAGYVPVRSVTNTAMRAQIRAWRVSAIVAVARPGTRLVRYLTILLGTPAVETGDVTAWRIPPSLR
Ga0318514_106308872	3300032066	Soil	PNARPGAAGYVPVKSVTNTAMRAQIRAWRVSAVVAVARPGTRLVSYLTILLGTPAVETGDVTAWRTPPSLR
Ga0318518_105133571	3300032090	Soil	VKSVTNTKMRKQIRAWRVSAVVAVTKPGTRLARYLTDLLGKPAVTTGDVIAWRIPARLR
Ga0307471_1026318502	3300032180	Hardwood Forest Soil	GATPNPRLNVTGQLPVKAVTDTKMREQIRAWRVSAVVAVARPDTGLGRYLTAILGPPAVITGDVIAWRIPPR
Ga0307472_1003478593	3300032205	Hardwood Forest Soil	AGSDATGYLPVKSVTNMTMREQIRAWKVSAVVAVATPGSQLARYLTAILGSPVVVTADVMAWRVSPLLRPGVILRGDS
Ga0307472_1007179781	3300032205	Hardwood Forest Soil	RTPNARPNATGYLPVKSVTNTKMREQIRAWKVSAVVAVATPGSRLGRYLTAILGSPAVAAGDVTAWRIPR
Ga0307472_1017360721	3300032205	Hardwood Forest Soil	AAAGASVAGATPNPRLNVTGQLPVKAVTDTKMREQIRAWRVSAVVAVARPDTGLGRYLTAILGPPAVITGDVIAWRIPPR
Ga0306920_1031728182	3300032261	Soil	HPGSAGYVPVKSVTNTRMLEQIRAWRVSAVVAVATPGSRLGRYLTGLLGTPAVVTGHVTAWRTPPSLR
Ga0306920_1038882081	3300032261	Soil	YVPVKSVTNTAMRAQIRAWRVSAVVAVARPGTRLVSYLTILLGKPAVETGDVTAWRTPPSLR
Ga0335082_116343752	3300032782	Soil	AGAPADARPGVAGYVRVKSVTDMRMREQIRAWRVSAVVAVAKPGSRLGRYLTRLLGTPAVVTGDVTAWRTPPSLR
Ga0335080_118237792	3300032828	Soil	ARPGAAGYVPVKSVTNTAMRAQIRAWRVSAVVAVARPGTRLVSYLTILLGTPAVEIGDVTAWRTPPSLR
Ga0335071_116035411	3300032897	Soil	PNARPGAAGYLPVKSVTDTRMLAQIRAWQVSAVVAVAKPGSRLARCLTVLLGTPAVVTGDVIAWRTPSSLR
Ga0310914_108840201	3300033289	Soil	HPGAAGYVPVRSVTNTAMRAQIRAWRVSAVVAVARPGTRLVSYLTILLGTPAVETGDVTAWRTPPSLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101721

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences