Metagenome Family F101713

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101713
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	77 residues
Representative Sequence	KLVLFSDMTDTIGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTADKIVEQLKATGR
Number of Associated Samples	88
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	83.33 %
% of genes from short scaffolds (< 2000 bps)	81.37 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.314 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (46.078 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.686 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.64% β-sheet: 13.08% Coil/Unstructured: 53.27%
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01872	RibD_C	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.98
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	84.31 %
Unclassified	root	N/A	15.69 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	73.53 %
Unclassified	root	N/A	15.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.84 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	70.59 %
Unclassified	root	N/A	15.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.84 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	70.59 %
Unclassified	root	N/A	15.69 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.84 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	70.59 %
Unclassified	root	N/A	15.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0771146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1401	Open in IMG/M
3300002562\|JGI25382J37095_10240005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300004480\|Ga0062592_101098500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	735	Open in IMG/M
3300005167\|Ga0066672_10250087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1141	Open in IMG/M
3300005171\|Ga0066677_10736542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300005172\|Ga0066683_10289486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1018	Open in IMG/M
3300005175\|Ga0066673_10352707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	859	Open in IMG/M
3300005176\|Ga0066679_10590183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	724	Open in IMG/M
3300005186\|Ga0066676_10263398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1130	Open in IMG/M
3300005186\|Ga0066676_10813393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	632	Open in IMG/M
3300005345\|Ga0070692_10484023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300005450\|Ga0066682_10974075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300005457\|Ga0070662_100501045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1013	Open in IMG/M
3300005459\|Ga0068867_100739246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	872	Open in IMG/M
3300005467\|Ga0070706_101048058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300005468\|Ga0070707_100294067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1578	Open in IMG/M
3300005468\|Ga0070707_101540778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300005544\|Ga0070686_100229876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1345	Open in IMG/M
3300005549\|Ga0070704_101234299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	682	Open in IMG/M
3300005549\|Ga0070704_101302275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	665	Open in IMG/M
3300005552\|Ga0066701_10872469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300005553\|Ga0066695_10394354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	860	Open in IMG/M
3300005555\|Ga0066692_10010794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4312	Open in IMG/M
3300005558\|Ga0066698_10374577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	982	Open in IMG/M
3300005566\|Ga0066693_10149625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	876	Open in IMG/M
3300005568\|Ga0066703_10462782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300005575\|Ga0066702_10912924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300005586\|Ga0066691_10118021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1504	Open in IMG/M
3300006034\|Ga0066656_10372986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	922	Open in IMG/M
3300006046\|Ga0066652_100366055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1303	Open in IMG/M
3300006791\|Ga0066653_10214369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	978	Open in IMG/M
3300006794\|Ga0066658_10781869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300006876\|Ga0079217_10571401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300006904\|Ga0075424_100371516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1524	Open in IMG/M
3300006918\|Ga0079216_10166453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1169	Open in IMG/M
3300007004\|Ga0079218_11514247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300007076\|Ga0075435_102007390	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300009137\|Ga0066709_100927085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1271	Open in IMG/M
3300010303\|Ga0134082_10360354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300010303\|Ga0134082_10541978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	511	Open in IMG/M
3300010325\|Ga0134064_10448969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	525	Open in IMG/M
3300010326\|Ga0134065_10478907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300010403\|Ga0134123_10451863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1195	Open in IMG/M
3300012198\|Ga0137364_10391240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1040	Open in IMG/M
3300012198\|Ga0137364_11414541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012203\|Ga0137399_11416364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300012208\|Ga0137376_10975432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	726	Open in IMG/M
3300012208\|Ga0137376_11813320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300012358\|Ga0137368_10172920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1567	Open in IMG/M
3300012532\|Ga0137373_10395654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1074	Open in IMG/M
3300012918\|Ga0137396_10103235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2038	Open in IMG/M
3300012918\|Ga0137396_10544106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	860	Open in IMG/M
3300012918\|Ga0137396_11017012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	599	Open in IMG/M
3300012975\|Ga0134110_10097293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1187	Open in IMG/M
3300012976\|Ga0134076_10307535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300012977\|Ga0134087_10551985	All Organisms → cellular organisms → Bacteria → Terrabacteria group	588	Open in IMG/M
3300013764\|Ga0120111_1160608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	509	Open in IMG/M
3300014154\|Ga0134075_10213231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	832	Open in IMG/M
3300014157\|Ga0134078_10042520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1541	Open in IMG/M
3300018054\|Ga0184621_10270744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300018433\|Ga0066667_10571828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	940	Open in IMG/M
3300018433\|Ga0066667_10616163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	906	Open in IMG/M
3300019885\|Ga0193747_1064899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	902	Open in IMG/M
3300020003\|Ga0193739_1113569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300021078\|Ga0210381_10019871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1771	Open in IMG/M
3300021344\|Ga0193719_10005160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5337	Open in IMG/M
3300022534\|Ga0224452_1064696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1098	Open in IMG/M
3300022534\|Ga0224452_1258745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300022756\|Ga0222622_10257903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1184	Open in IMG/M
3300025922\|Ga0207646_11499173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300025960\|Ga0207651_11927488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300026313\|Ga0209761_1288967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	579	Open in IMG/M
3300026318\|Ga0209471_1201623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300026335\|Ga0209804_1159507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1000	Open in IMG/M
3300026529\|Ga0209806_1319189	All Organisms → cellular organisms → Bacteria → Terrabacteria group	521	Open in IMG/M
3300026536\|Ga0209058_1112414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1356	Open in IMG/M
3300026538\|Ga0209056_10243197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1283	Open in IMG/M
3300026542\|Ga0209805_1230271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300027637\|Ga0209818_1137896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	675	Open in IMG/M
3300027681\|Ga0208991_1214270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300027691\|Ga0209485_1055620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1027	Open in IMG/M
3300027886\|Ga0209486_10521509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300028719\|Ga0307301_10251933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300028784\|Ga0307282_10082788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1472	Open in IMG/M
3300028784\|Ga0307282_10582261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300028828\|Ga0307312_10597076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.10%
Host-Associated	Host-Associated	4.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.20%
Aquatic	Environmental → Aquatic	4.90%
Plants	Host-Associated → Plants	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.20%
Sediment	Environmental → Aquatic → Sediment	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.47%
Loam	Environmental → Terrestrial → Soil → Loam	13.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_07711461	3300000033	Soil	VASGVFKANPGTHKLLLFSDMTDTIGNPVRPDLAQSDVVVALYHRDDANDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR*
JGI25382J37095_102400052	3300002562	Grasslands Soil	LFSDMSDTVGNAVRPDLVQSDIVVALYHRDDPNDQGLAQKQWESALRTLGARATVFLPWAATTVDKIADQLREGGR*
Ga0062592_1010985001	3300004480	Soil	DMTDTIGNGVRPDLAQADVVIALYHRDDASDQGKGQRDWEATFKSLGARAPVFLSWAATTTEKLAEQLKGSAR*
Ga0066672_102500872	3300005167	Soil	MTDTIGNAVRPDLGQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR*
Ga0066677_107365422	3300005171	Soil	FSDMTDTIGNAVRPDLGQSDVVVGLYHRDDPSDQGKGQRDWEATFKTLGATTPVFLPWAATTPDKIAELLRVGTR*
Ga0066683_102894861	3300005172	Soil	MTDTIGNPVRPDLGQSEVLVALYHRDDASDQGKGQKDWEATFKALGARVPVFLPWAATTADKLAEQLKGSAR*
Ga0066673_103527072	3300005175	Soil	KHKLVLFSDMTDTIGNPIRPDLAQSDIVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0066679_105901832	3300005176	Soil	DLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0066676_102633981	3300005186	Soil	DMTDTIGNPVRADLAQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR*
Ga0066676_108133932	3300005186	Soil	LFSDMSDTIGNAVRPDLAQSDVVIALYHRDDPNDQGVAQKQWETALRTLGARATVFLPWAATTVDKIADQLKEGGR*
Ga0070692_104840231	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	FSDMTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR*
Ga0070705_1019354771	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GVRPDLAQSEIVVALYHRDDASDQGKGQKDWETTFKALGARAPVFLPWAATTADKLAEQLKGSAR*
Ga0066689_108651502	3300005447	Soil	PDLAQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR*
Ga0066682_109740752	3300005450	Soil	GKHKLVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0070662_1005010451	3300005457	Corn Rhizosphere	DLAQSDVVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR*
Ga0068867_1007392461	3300005459	Miscanthus Rhizosphere	TDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR*
Ga0070706_1010480582	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ANPGKHKLVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQRDWENTFKTLNARTPVFLPWAATTADKIVEQLKASGR*
Ga0070707_1002940672	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DLAQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR*
Ga0070707_1015407782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GVFKANPGTHKLLLFSDMTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR*
Ga0070686_1002298762	3300005544	Switchgrass Rhizosphere	DTIGNAVRPDLAQSDVVVALYHRDDASDQGKGQKDWETAFKALGARVPVFLPWAATTADKLAEQLKGSAR*
Ga0070704_1012342992	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	NPGTHKLLLFSDMTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR*
Ga0070704_1013022752	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LVLFSDMTDTVGNAVRPDLAQSEIVVALYHRDDASDQGKGQRDWETTFKALGARAPVFLPWAATTADKLAEQLKGSAR*
Ga0070704_1021766661	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	NPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR*
Ga0066701_108724692	3300005552	Soil	RHKLVVFSDMTDTVGNPVRPDLGQSDVVVGLYHRDDPSDQSTGQKDWEATFRKLNARTPVFLPWAATTADKIAEQLKASGR*
Ga0066695_103943542	3300005553	Soil	NPVRPDLAQSEVLVALYHRDDASDQGKGQKDWEATFKALGARAPVFLPWAATTADKLAEQLKGSAR*
Ga0066692_100107941	3300005555	Soil	TANPGTHKLVVFSDMTDTIGNPVRPDLAQSEVLVALYHRDDASDQGKGQKDWEATFKALGARVPVFLPWAATTADKLAEQLKGSAR*
Ga0066698_103745772	3300005558	Soil	KHKLVLFSDMTDTVGNPVRPDLSKSDIVVGLYHRDDPSDQGKGQRDWETTFRTLNAQTPVFLPWAATTVDKIVEQLKATGR*
Ga0066700_110867512	3300005559	Soil	RPDLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0066693_101496252	3300005566	Soil	KLVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0066703_104627821	3300005568	Soil	FGANPGKHKLVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0066702_109129242	3300005575	Soil	AGGVFKSNPGRHKLVLFSDMSDTIGSAVRPDLVQSDVVIALYHRDDPNDQGQGQKQWETALRTLGARGTVFLPWAATTVDKIADQLKESGR*
Ga0066691_101180211	3300005586	Soil	GGVFGANPGKHKLVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0066706_112397772	3300005598	Soil	TDTIGNPVRADLAQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR*
Ga0066656_103729861	3300006034	Soil	PVRADLAQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR*
Ga0066652_1003660552	3300006046	Soil	GKHKLVLFSDMTDTVGNPVRPDLEQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTADKIVEQLKATGR*
Ga0070716_1011980531	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	NAVRPDLGQSDVIVGLYHRDDPSDQGKGQRDWEATFKTLGATTPVFLPWAATTVDKIVEQLRATGR*
Ga0066653_102143691	3300006791	Soil	TVGNPVRPDLSQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0066658_107818692	3300006794	Soil	VVFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTADKIVEQLKATGR*
Ga0066659_101505752	3300006797	Soil	GNPVRPDLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0079217_105714011	3300006876	Agricultural Soil	THKLVLFSDMTDTIGNAVRPDLAQSEIVVALYHRDDATDQGKGQKDWEATFKSLGARAPVFLPWAATTADKLAEQLKGSAR*
Ga0075424_1003715161	3300006904	Populus Rhizosphere	GVFKANPGTHKLLLFSDMTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFKTLGARAPVFLAWAATTADKLAEQLKGSAR*
Ga0079216_101664532	3300006918	Agricultural Soil	ANPGTHKLVLFSDMTDTIGNAVRPDLAQSEIVVALYHRDDASDQGKGQKDWEATFKSLGARPPVFLPWAATTSDKLAEQLKGSAR*
Ga0079218_115142471	3300007004	Agricultural Soil	HKLVLFSDMTDTIGNGVRPDLAQAEVVVALYHRDDATDQGKGQKDWEATFKSLGARAPVFLSWAATTTEKLAEQLKGSTR*
Ga0075435_1020073902	3300007076	Populus Rhizosphere	GNPVRPDLAGSDVVIALYHRDDASDQSKGQKDWDAMFRSLGARAPVFLPWATTTADKLAEQLKGAAR*
Ga0066710_1039719131	3300009012	Grasslands Soil	RPDLAQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTTDKIVEQLRATGR
Ga0066709_1009270852	3300009137	Grasslands Soil	MTDTIGNPVRADLAQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR*
Ga0066709_1039169432	3300009137	Grasslands Soil	PDLAQSEVLVALYHRDDASDQGKGQKDWEATFKALGARVPVFLPWAATTADKLAEQLKGSAR*
Ga0134082_103603542	3300010303	Grasslands Soil	PGKHKIVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0134082_105419781	3300010303	Grasslands Soil	AVASGVFTANPGTHKLVVFSDMTDTIGNPVRPDLAQSEVLVALYHRDDASDQGKGQKDWEATFKALGARVPVFLPWAATTADKLAEQLKGSAR*
Ga0134064_104489692	3300010325	Grasslands Soil	VASGVFTANPGTHKLVVFSDMTDTIGNPVRPDLAQSEVLVALYHRDDASDQGKGQKDWEATFKALGARVPVFLPWAATTADKLAEQLKGSAR*
Ga0134065_104789071	3300010326	Grasslands Soil	ANPGKHKLVLFSDMTDTVGNPIRPDLSKSDIVIGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0134071_104713851	3300010336	Grasslands Soil	DMTDTVGNPVRPDLSKSDIVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR*
Ga0134123_104518632	3300010403	Terrestrial Soil	LFSNMTDTIGNPVRPDLAQSDVFVALDHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR*
Ga0137364_103912401	3300012198	Vadose Zone Soil	KLVLFSDMTDTIGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTADKIVEQLKATGR*
Ga0137364_114145412	3300012198	Vadose Zone Soil	MTDTIGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTSDKIVEQLKASGR*
Ga0137399_114163641	3300012203	Vadose Zone Soil	GGVFGANPGKHKLVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQRDWESTFKTLNARAPVFLPWAATTPDKIVEQLKASGR*
Ga0137376_109754322	3300012208	Vadose Zone Soil	NPVRPDLEQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTADKIVEQLKATGR*
Ga0137376_118133202	3300012208	Vadose Zone Soil	VFGANPGKHKLVLFSDMTDTVGNPVRPDLEQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTTDKIVEQLRATGR*
Ga0137368_101729202	3300012358	Vadose Zone Soil	FSDMTDTIGNPVRPDLAQSEVLVALYHRDDASDQGNGQKDWEATFKALGARAPVFLAWAVTTADKLAEQLKGSAR*
Ga0137373_103956541	3300012532	Vadose Zone Soil	HRLVVFSDMTDTIGNPVRPDLAQSEVLVALYHRDDASDQGNGQKDWEATFKALGARAPVFLPWAATTADKLAEQLKGSAR*
Ga0137396_101032352	3300012918	Vadose Zone Soil	VFGANPGKHKLVLFSDMTDTIGNPIRPDLAQSDIVVGLYHRDDPNDQGKGQRDWETTFKTLNARAPVFLPWAATTVDKIVEQLKATGR*
Ga0137396_105441062	3300012918	Vadose Zone Soil	FISNPGTHKLLVFSDMTDTMGNPVRPNLAQSEVVVALYHRDDASDQSKGQKDWESTFKALGARAPVFLPWITTTADKLAEQLKGSVR*
Ga0137396_110170122	3300012918	Vadose Zone Soil	PGTHKLLVFSDMTDTIGNPVRPDLAQSEVVVALYHRDDASDQGKGQKDWETTFKSLGARVPVFLPWAATTADKLAEQLKGSAR*
Ga0134110_100972932	3300012975	Grasslands Soil	PGRHKLVVFSDMTDTIGNPVRPDLGQSDVVVGLYHRDDPSDQSTGQKDWEATFRKLNARTPVFLPWAATTADKIAEQLKASGR*
Ga0134076_103075351	3300012976	Grasslands Soil	NPGKHKLVLFSDMTDTVGNPVRPDLAQSDIVVGLYHRDDPSDQGRGQRDWETTFKTLNARTPVFLPWAATTPDKIVEQLKATGR*
Ga0134087_105519852	3300012977	Grasslands Soil	VFSDMTDTVGNPVRPDLGQSDVVVGLYHRDDPSDQSIGQKDWEATFRKLNARTPVFLPWAATTADKIAEQLKASGR*
Ga0120111_11606082	3300013764	Permafrost	NPGKHKLVLFSDMTDTVGNPIRPDLSQSDIVVGLYHRDDPNDQGKGQRDWETTFKTLNAKAPVFLPWAATTVDKIVEQLKATGR*
Ga0134075_102132311	3300014154	Grasslands Soil	VFKSNPGRHKLVLFSDMSDTVGNAVRPDLAQSDVVIALYHRDDPNDQGVAQKQWETALRTLGARATVFLPWAATTVDKIADQLKEGGR*
Ga0134078_100425202	3300014157	Grasslands Soil	THKLVLFSDMTDTVGNPVRPDLGQSDVVIGLYHRDDPSDQGKGQRDWESTFKTLNARTPVFLPWAATTADKVVEMLRASGR*
Ga0184621_102707442	3300018054	Groundwater Sediment	LAVASGVFTANPGTHKLLLFSDMTDTIGNPVRPDLAQSEVVVALYHRDDASDQGKGQKDWEATFKALGARAPVFLAWAATTADKLAEQLKGSAR
Ga0066667_105718281	3300018433	Grasslands Soil	VFGANPGKHKLVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQLDWANTFKTLNARTPVFLPWAATTVDKIVEQLKATGR
Ga0066667_106161632	3300018433	Grasslands Soil	LFSDMTDTVGNPVRPDLEQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTADKIVEQLRATGR
Ga0193747_10648992	3300019885	Soil	AVAGGVFGANPGKHKLVLFSDMTDTVGNPIRPDLAQSDIVVGLYHRDDPSDQGKGQRDWETTFRTLNARAPVFLPWAATTPDKIVEQLKATGR
Ga0193739_11135692	3300020003	Soil	IGNAVRPDLAQSEIVVALYHRDDASDQGRGQKDWEATFKALGARAPVFLPWAATNADKLAEQLKGSAR
Ga0210381_100198712	3300021078	Groundwater Sediment	MTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR
Ga0193719_100051601	3300021344	Soil	PVRPDLAQSDVVVALYHRDDASDQGKGQKDWEVTFNTLGARVPVFLAWAATTADKLAEQLKGSAR
Ga0224452_10646962	3300022534	Groundwater Sediment	VRPDLAQSEVVVALYHRDDASDQGKGQKDWEATFKALGARAPVFLAWAATTADKLAEQLKGSAR
Ga0224452_12587452	3300022534	Groundwater Sediment	ANPGAHKLLLFSDMTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWETTFTTLGARAPVFLAWAATTADKLAEQLKGSAR
Ga0222622_102579032	3300022756	Groundwater Sediment	PIRPDLGQSDIVVGLYHRDDPSDQGKGQRDWETTFKTLNARAPVFLPWAATTVDKIVEQLKATGR
Ga0207646_114991731	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	KANPGTHKLLLFSDMTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFKTLGARAPVFLAWAATTADKLAEQLKGSAR
Ga0207651_119274882	3300025960	Switchgrass Rhizosphere	HKLLLFSDMTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR
Ga0209239_12337622	3300026310	Grasslands Soil	NPVRPDLGQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTADKIVEQLKATGR
Ga0209761_12889671	3300026313	Grasslands Soil	SDTIGNAVRPDLAQSDVVIALYHRDDPNDQGVAQKQWETALRTLGARATVFLPWAATTVDKIADQLKEGGR
Ga0209471_12016232	3300026318	Soil	LVLFSDMSDTVGNAVRPDLAQSDVVIALYHRDDPNDQGVAQKQWETALRTLGARATVFLPWAATTVDKIADQLKEGGR
Ga0209152_103236851	3300026325	Soil	DMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGRGQRDWETTFKTLNARTPVFLPWAATTADKIVEQLKATGR
Ga0209804_11595072	3300026335	Soil	VAGGVFKANPGKHKLVLFSDMTDTVGNPVRPDLAQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR
Ga0209806_13191892	3300026529	Soil	VFSDMTDTIGNPVRPDLAQSEVLVALYHRDDASDQGKGQKDWETTFKALGARVPVFLPWAATTADKLAEQLKGSAR
Ga0209058_11124142	3300026536	Soil	VRPDLAGSDVVVGLYHRDDASDQGKGQRDWENTFKSLNARPPVFLPWAATTPDKIVEQLKASGR
Ga0209056_102431972	3300026538	Soil	DMTDTIGNPVRADLAQSDVVVGLYHRDDPSDQGKGQKDWETTFRTLGAQTPVFLPWAATTPDKVAELLKGSGR
Ga0209805_12302711	3300026542	Soil	VFGANPGTHKLVLFSDMTDTVGNPVRPDLGQSDVVIGLYHRDDPSDQGKGQRDWESTFKTLNARTPVFLPWAATTADKVVEMLRASGR
Ga0209818_11378962	3300027637	Agricultural Soil	VLFSDMTDTIGNAVRPDLAQSEIVVALYHRDDATDQGKGQKDWEATFKSLGARAPVFLPWAATTADKLAEQLKGSAR
Ga0208991_12142701	3300027681	Forest Soil	PGAHKLVLFSDMTDTIGNGVRPDLAQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTAAKIVEQLKATGR
Ga0209485_10556202	3300027691	Agricultural Soil	ANPGTHKLVLFSDMTDTIGNAVRPDLAQSEIVVALYHRDDASDQGKGQKDWEATFKSLGARPPVFLPWAATTSDKLAEQLKGSAR
Ga0209486_105215091	3300027886	Agricultural Soil	LVLFSDMTDTIGNGVRPDLAQAEVVVALYHRDDATDQGKGQKDWEATFKSLGARAPVFLSWAATTTEKLAEQLKGSTR
Ga0307301_102519331	3300028719	Soil	HKLVLFSDMTDTIGNAVRPDLAQSEIVVALYHRDDASDQGKGQKDWEATFTTLGARAPVFLAWAATTADKLAEQLKGSAR
Ga0307320_103345122	3300028771	Soil	PIRPDIGQSDIVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTVDKIVEQLKSTGR
Ga0307282_100827881	3300028784	Soil	FKANPGTHKLLLFSDMTDTIGNPVRPDLAQSDVVVALYHRDDASDQGKGQKDWEVTFNTLGARVPVFLAWAATTADKLAEQLKGSAR
Ga0307282_104581881	3300028784	Soil	IRPDLGQSDVVVGLYHRDDPSDQGKGQRDWETTFKTLNAGTPVFLPWAATTVDKIVEQLKATGR
Ga0307282_105822612	3300028784	Soil	HKLVLFSDMTDTIGNPIRPDLAQSDIVVGLYHRDDPSDQGKGQRDWETTFKTLNARTPVFLPWAATTVDKVVEQLKATGR
Ga0307296_106427151	3300028819	Soil	VRPDLAQSDVVVALYHRDDASDQGKGQKDWETTFTTLGARAPVFLAWAATTADKLAEQLKGSAR
Ga0307312_105970761	3300028828	Soil	ANPGTHKLLLFSDMTDTIGNPVRPDLAQSEVVVALYHRDDASDQGKGQKDWEATFKALGARAPVFLAWAATTADKLAEQLKGSAR
Ga0307469_118930242	3300031720	Hardwood Forest Soil	VGNPVRPDLAKSDIVVGLYHRDDPTDQGKGQRDWETTFRTLNAQPPVFLPWAATTVDKIVEQLKATGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101713

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences