NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F101712

Metagenome / Metatranscriptome Family F101712

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101712
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 67 residues
Representative Sequence MDVSASASSIANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR
Number of Associated Samples 89
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.88 %
% of genes near scaffold ends (potentially truncated) 16.67 %
% of genes from short scaffolds (< 2000 bps) 88.24 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (76.471 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil
(21.569 % of family members)
Environment Ontology (ENVO) Unclassified
(28.431 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.882 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 60.00%    β-sheet: 0.00%    Coil/Unstructured: 40.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.102.1.1: Glucoamylased2fbaa_2fba0.67404
a.102.1.4: Glycosyltransferase family 36 C-terminal domaind1v7va11v7v0.66678
a.102.1.5: Bacterial glucoamylase C-terminal domain-liked1lf9a11lf90.64341
c.77.1.2: Monomeric isocitrate dehydrogenased2b0ta_2b0t0.64336
e.8.1.1: DNA polymerase Id1s5ja21s5j0.63563

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF11937DUF3455 3.92
PF03150CCP_MauG 2.94
PF00486Trans_reg_C 1.96
PF13751DDE_Tnp_1_6 1.96
PF00756Esterase 0.98
PF05598DUF772 0.98
PF01641SelR 0.98
PF13472Lipase_GDSL_2 0.98
PF06628Catalase-rel 0.98
PF00230MIP 0.98
PF06429Flg_bbr_C 0.98
PF06568DUF1127 0.98
PF03098An_peroxidase 0.98
PF03118RNA_pol_A_CTD 0.98
PF01970TctA 0.98
PF13533Biotin_lipoyl_2 0.98
PF02518HATPase_c 0.98
PF13419HAD_2 0.98
PF13817DDE_Tnp_IS66_C 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG1858Cytochrome c peroxidasePosttranslational modification, protein turnover, chaperones [O] 2.94
COG0202DNA-directed RNA polymerase, alpha subunit/40 kD subunitTranscription [K] 0.98
COG0229Peptide methionine sulfoxide reductase MsrBPosttranslational modification, protein turnover, chaperones [O] 0.98
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 0.98
COG0753CatalaseInorganic ion transport and metabolism [P] 0.98
COG1256Flagellar hook-associated protein FlgKCell motility [N] 0.98
COG1558Flagellar basal body rod protein FlgCCell motility [N] 0.98
COG1749Flagellar hook protein FlgECell motility [N] 0.98
COG1784TctA family transporterGeneral function prediction only [R] 0.98
COG3333TctA family transporterGeneral function prediction only [R] 0.98
COG4786Flagellar basal body rod protein FlgGCell motility [N] 0.98
COG4787Flagellar basal body rod protein FlgFCell motility [N] 0.98
COG5457Uncharacterized conserved protein YjiS, DUF1127 familyFunction unknown [S] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.47 %
UnclassifiedrootN/A23.53 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000363|ICChiseqgaiiFebDRAFT_14042209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi539Open in IMG/M
3300000732|JGI12023J11887_1001755All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00691245Open in IMG/M
3300000955|JGI1027J12803_103436466All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi1096Open in IMG/M
3300001471|JGI12712J15308_10180842All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium551Open in IMG/M
3300001593|JGI12635J15846_10245612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1152Open in IMG/M
3300001593|JGI12635J15846_10324632Not Available953Open in IMG/M
3300001661|JGI12053J15887_10148819All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium1231Open in IMG/M
3300001661|JGI12053J15887_10325046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium748Open in IMG/M
3300001661|JGI12053J15887_10540240All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi555Open in IMG/M
3300001661|JGI12053J15887_10640996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi505Open in IMG/M
3300002245|JGIcombinedJ26739_100170354All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2059Open in IMG/M
3300002245|JGIcombinedJ26739_100721499All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium875Open in IMG/M
3300002907|JGI25613J43889_10051349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi1155Open in IMG/M
3300005176|Ga0066679_10255493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1130Open in IMG/M
3300005177|Ga0066690_10159403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi1487Open in IMG/M
3300005435|Ga0070714_101800648Not Available598Open in IMG/M
3300005436|Ga0070713_101806885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi593Open in IMG/M
3300005437|Ga0070710_11480377All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium510Open in IMG/M
3300005446|Ga0066686_10175283All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1428Open in IMG/M
3300005447|Ga0066689_10099660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1663Open in IMG/M
3300005454|Ga0066687_10349664All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi847Open in IMG/M
3300005467|Ga0070706_101182813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi703Open in IMG/M
3300005536|Ga0070697_100213164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi1645Open in IMG/M
3300005552|Ga0066701_10892975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi527Open in IMG/M
3300005554|Ga0066661_10162255All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1372Open in IMG/M
3300005557|Ga0066704_10151513All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi1555Open in IMG/M
3300005561|Ga0066699_10921022Not Available609Open in IMG/M
3300005577|Ga0068857_100722141Not Available948Open in IMG/M
3300005616|Ga0068852_100973787Not Available867Open in IMG/M
3300005983|Ga0081540_1001850All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium17729Open in IMG/M
3300005983|Ga0081540_1157642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium886Open in IMG/M
3300006173|Ga0070716_101330419All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi582Open in IMG/M
3300006176|Ga0070765_101907977Not Available556Open in IMG/M
3300006797|Ga0066659_10513167All Organisms → cellular organisms → Bacteria963Open in IMG/M
3300006804|Ga0079221_10457720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens812Open in IMG/M
3300006903|Ga0075426_10092617All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2165Open in IMG/M
3300006904|Ga0075424_101554249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium702Open in IMG/M
3300007788|Ga0099795_10195679Not Available851Open in IMG/M
3300007788|Ga0099795_10527787Not Available553Open in IMG/M
3300009143|Ga0099792_10434006Not Available810Open in IMG/M
3300009143|Ga0099792_10631322All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi686Open in IMG/M
3300009545|Ga0105237_11550105Not Available669Open in IMG/M
3300009551|Ga0105238_10518996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR651194Open in IMG/M
3300010373|Ga0134128_10015734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium8994Open in IMG/M
3300010396|Ga0134126_10470539All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1452Open in IMG/M
3300010860|Ga0126351_1212211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi677Open in IMG/M
3300010861|Ga0126349_1179781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi608Open in IMG/M
3300011120|Ga0150983_10416203Not Available564Open in IMG/M
3300012203|Ga0137399_10547284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae972Open in IMG/M
3300012362|Ga0137361_10193031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1839Open in IMG/M
3300012683|Ga0137398_10017546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3810Open in IMG/M
3300012683|Ga0137398_11056484Not Available561Open in IMG/M
3300012685|Ga0137397_10061872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2701Open in IMG/M
3300012923|Ga0137359_10219752All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1697Open in IMG/M
3300012924|Ga0137413_10011955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4293Open in IMG/M
3300012925|Ga0137419_11015849Not Available688Open in IMG/M
3300012941|Ga0162652_100029616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi814Open in IMG/M
3300014501|Ga0182024_11712393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi707Open in IMG/M
3300018429|Ga0190272_10211101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1414Open in IMG/M
3300018433|Ga0066667_10964604All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium735Open in IMG/M
3300018468|Ga0066662_11081967All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales800Open in IMG/M
3300019889|Ga0193743_1013398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4524Open in IMG/M
3300020170|Ga0179594_10309221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi599Open in IMG/M
3300020199|Ga0179592_10308745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi702Open in IMG/M
3300020199|Ga0179592_10373259Not Available625Open in IMG/M
3300020582|Ga0210395_10747349All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales730Open in IMG/M
3300021170|Ga0210400_10256008All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1432Open in IMG/M
3300021178|Ga0210408_10412248All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1076Open in IMG/M
3300021178|Ga0210408_10737086Not Available774Open in IMG/M
3300021404|Ga0210389_10485737All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300021404|Ga0210389_10903305Not Available687Open in IMG/M
3300021479|Ga0210410_10234942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1643Open in IMG/M
3300023046|Ga0233356_1015820Not Available856Open in IMG/M
3300024288|Ga0179589_10464753Not Available585Open in IMG/M
3300025929|Ga0207664_10953129Not Available770Open in IMG/M
3300025939|Ga0207665_10052639All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2743Open in IMG/M
3300025944|Ga0207661_10350664All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1331Open in IMG/M
3300026142|Ga0207698_10826011All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens930Open in IMG/M
3300026295|Ga0209234_1194612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales695Open in IMG/M
3300026301|Ga0209238_1171394All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi642Open in IMG/M
3300026320|Ga0209131_1213747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium866Open in IMG/M
3300026333|Ga0209158_1243738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi616Open in IMG/M
3300026555|Ga0179593_1101245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1783Open in IMG/M
3300027181|Ga0208997_1005707All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00691568Open in IMG/M
3300027480|Ga0208993_1020028All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1174Open in IMG/M
3300027537|Ga0209419_1006002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1909Open in IMG/M
3300027562|Ga0209735_1066683Not Available776Open in IMG/M
3300027603|Ga0209331_1109549Not Available671Open in IMG/M
3300027645|Ga0209117_1100503Not Available791Open in IMG/M
3300027660|Ga0209736_1009366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3154Open in IMG/M
3300027678|Ga0209011_1023534All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1988Open in IMG/M
3300027681|Ga0208991_1000375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium10889Open in IMG/M
3300027725|Ga0209178_1343776Not Available557Open in IMG/M
3300027895|Ga0209624_10247610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi1185Open in IMG/M
3300027903|Ga0209488_10262207All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00691294Open in IMG/M
3300027908|Ga0209006_10236120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1861577Open in IMG/M
3300028536|Ga0137415_10256900All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1555Open in IMG/M
3300028536|Ga0137415_10334665All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300028794|Ga0307515_10567249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi745Open in IMG/M
3300031152|Ga0307501_10253682All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium cenepequi525Open in IMG/M
3300032782|Ga0335082_11122563Not Available653Open in IMG/M
3300033475|Ga0310811_10069927All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4629Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil21.57%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil12.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.92%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.96%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.96%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.98%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.98%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.98%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.98%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000732Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010860Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012941Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300023046Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MSEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiFebDRAFT_1404220913300000363SoilMDVSVSARILASSLNTASASREITHEFRYHAKVLNDHLADVLRSGLFDDIDRFFKMLEAHVRNRRAKVMRRRRDR*
JGI12023J11887_100175533300000732Forest SoilMDVSSSASSIANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLELHVRNRRAR*
JGI1027J12803_10343646643300000955SoilMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHFFNMLEAHVRNRRAR*
JGI12712J15308_1018084223300001471Forest SoilMDLSASTRIIANALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEVHARNLGQE*
JGI12635J15846_1024561223300001593Forest SoilMDVSASASSLANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFCKMLEAHVRNRRAR*
JGI12635J15846_1032463233300001593Forest SoilANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFCKMLEAHARNRRAR*
JGI12053J15887_1014881913300001661Forest SoilMYLSVSTRIIANALNTASTSREIPHEFRYHAKVLNDRLAEVLRSGLFDDLDNFFKMLETHVRNPGQG*
JGI12053J15887_1032504623300001661Forest SoilMDVSSSASSIANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLDAHVRNRRAR*
JGI12053J15887_1054024023300001661Forest SoilAMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHFFEMLEAHVRNRRAR*
JGI12053J15887_1064099623300001661Forest SoilMGSRPSARILADALNTASTSREIPHEFRYHAKVLNDHLTEVLCSGMFEDIDHFFKMLERRVCNRRAR*
JGIcombinedJ26739_10017035433300002245Forest SoilMDVSASASSLANSLNTVSTSREIPHEFRYHAKVLNDQLADVLRSGLFDDIDHFCKMLEAHVRNRRAR*
JGIcombinedJ26739_10072149923300002245Forest SoilMDLSASTRIIANALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHVRNPGQG*
JGI25613J43889_1005134913300002907Grasslands SoilMYLSVSTRIIANALNTASTSREIPHEFRYHAKVLNDRLAEVLRSGLFDDLDNFFKMLEAHVRNPGQGDAPRSDR*
Ga0066679_1025549323300005176SoilMDISASARILADALNTASTSREIPHEFRYHAKVLNDHLTEVLCSGMFEDIDHFFKMLERRVCNRRAR*
Ga0066690_1015940323300005177SoilMDFSASARILADALNTASTSREIPHEFRYHAKVLNDHLTEVLRSGIFEDIDHFFKMLERRVCNRRAR*
Ga0070714_10180064823300005435Agricultural SoilMDVSASARILADALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHMRNPGLGDAPTK*
Ga0070713_10180688513300005436Corn, Switchgrass And Miscanthus RhizosphereMDVSVSARILASSLNTASASGEIPHEFRYHAKVLNEHLADVLRSGLFDDIDHFFKMLEAHVRNGRAR*
Ga0070710_1148037713300005437Corn, Switchgrass And Miscanthus RhizosphereASARIIAAALNTVSTSREMPHEFRYHAKVLNDHLDEVLRSGMFDDIDDFFKLLERRVCNRRTS*
Ga0066686_1017528333300005446SoilMDVSVSARIIANSLNTASTSREIPQEFCYHATVLDDHLAEVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0066689_1009966023300005447SoilMDVSVSARIIANSLNTASTSREIPQEFCYHATVLNDHLAEVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0066687_1034966423300005454SoilMDVSASASSIANSLNTVSISREIPHEFRYHAKVLNDHLADVLRSGLFDDIDQFFKMLEAHVRNRRAR*
Ga0070706_10118281313300005467Corn, Switchgrass And Miscanthus RhizosphereMDVSASASIIANSLNTVSTSREIPHELRYHAKVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNSRAR*
Ga0070697_10021316433300005536Corn, Switchgrass And Miscanthus RhizosphereMDVSVSARIIANSLYTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0066701_1089297513300005552SoilMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLAEVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0066661_1016225533300005554SoilMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0066704_1015151313300005557SoilMDVSVSARIIANSLNTASTSREIPQEFCYHATVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0066699_1092102213300005561SoilMDFSASARILADALNTASTSREIPHEFRYHAKVLNDHLTEVLCSGMFEDIDHFFKMLERRVCNRRAR*
Ga0068857_10072214113300005577Corn RhizosphereMDVSVSASLIVSSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDRFFKMLEAHERNRRAR*
Ga0068852_10097378723300005616Corn RhizosphereSVSASLIASSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDHFFKMLEAHERNRRAR*
Ga0081540_1001850173300005983Tabebuia Heterophylla RhizosphereMVVSASARIIAAALSDVSLSCEMPPEFRYHAKVLNEHLTEVMRSGMFDDIDEFFKLLEGRVCDRGSP*
Ga0081540_115764223300005983Tabebuia Heterophylla RhizosphereMVVSASARIIAAALSDVSSSCEMPPEFRYHATVLNEHLTEVMRSGMFDDIDQFFKLLEGRVCDRGSP*
Ga0070716_10133041913300006173Corn, Switchgrass And Miscanthus RhizosphereMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNGRAR*
Ga0070765_10190797713300006176SoilMDLSASTRIIANALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHARNPGQG*
Ga0066659_1051316713300006797SoilMDVSASASSIANSLNTVSISREIPHEFRYHAKVLNDHLADVLRSGLFEDIDHFFKMLEAHVRNRRAR*
Ga0079221_1045772013300006804Agricultural SoilTMDVSVSASLIVSSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDRFFKMLEAHERNRRAR*
Ga0075426_1009261713300006903Populus RhizosphereMDVSVSASLIVSSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDHFFKMLEAHERNRRAR*
Ga0075424_10155424923300006904Populus RhizosphereMDVSASARIIAAALNTVSTSREMPHEFRYHAKVLNDHLDEVLRSGMFDDIDDFFKLLERRACNRRTS*
Ga0099795_1019567913300007788Vadose Zone SoilMDVSVSARIIANALNTASTSREIPHEFRYHATVLNDHLADVLRSGLFHDLDHFFKMLEAHVRNPGQG*
Ga0099795_1052778723300007788Vadose Zone SoilMYLSVSTRIIANSLNTASTSHEIPHEFRYQAKVLNDRLAEVLRSGLFDDLDNFFKMLETHVRNPGQG*
Ga0099792_1043400623300009143Vadose Zone SoilMDVSSSASSIAKSLNTVSTSREIPNELRYHAKVLNDHLADVLRSGLFDDIDHFFKMLE
Ga0099792_1063132213300009143Vadose Zone SoilMDVSAGASSLANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLELHVRNRRAR*
Ga0105237_1155010513300009545Corn RhizosphereMDVSVSASLIASSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDHFFKMLEAHERNRRAR*
Ga0105238_1051899623300009551Corn RhizosphereMDVSVSASLIVNTLNNVSTSREIPHELRYHAQVLNDHLADVLRSGLFDGIDRFFKMLEAHERNRRAR*
Ga0134128_1001573413300010373Terrestrial SoilSSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDHFFKMLEAHERNRRAR*
Ga0134126_1047053913300010396Terrestrial SoilMRRKQTMGVSVSANLIANSLNAVSTSRRIPHELRYHAKVLNDHLDDVLRSGLFDGIDHFFKILEAHERNRRPR*
Ga0126351_121221123300010860Boreal Forest SoilMDVSASASSLANSLNTVSTSREIPHEFRYHATVLNDHLADVLRSGLFHDLDHFFEMLEAHVRNRRAW*
Ga0126349_117978123300010861Boreal Forest SoilMDVSASASSIANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0150983_1041620323300011120Forest SoilMDLSASTRIIANALNTASASREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHARNPGQG*
Ga0137399_1054728423300012203Vadose Zone SoilMNLSVSTRIIANTLNTASTSSEIPHEFRHHAKVLNDRLADVLRSGLFDDLDNFFKMLEAHVRNPGQG*
Ga0137361_1019303133300012362Vadose Zone SoilMDVSVGARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0137398_1001754623300012683Vadose Zone SoilMDLSAGAHIIANALNTASTSREVPHEFRYHATVLNDHLADVLRSGLFHDLDHFFKMLEAHVRNPGQG*
Ga0137398_1105648413300012683Vadose Zone SoilMYLSVSTRIIANALNTASTSREIPHEFRYHAKVLNDRLADVLRSGLFDDLDNFFKMLEAHVRNPGQG*
Ga0137397_1006187223300012685Vadose Zone SoilMDLSASTHIIANALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHVRNPGQG*
Ga0137359_1021975233300012923Vadose Zone SoilMDVSVSASSIANALNTVSTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR*
Ga0137413_1001195523300012924Vadose Zone SoilMDLSASAHIIANALNTASTSREIPHEFRYHATVLNDHLADVLRSGLFHDLDHFFKMLEAHVRNPGQG*
Ga0137419_1101584923300012925Vadose Zone SoilMDVSASARILADALNTASTSREIPHEFRYHAKVLNDHLTEVLCSGMFEDIDHFFKMLERRVCNRRAR*
Ga0162652_10002961623300012941SoilMDFSASARILADALNTASTSREMPREFRYHAKVLNDHLTEVLRSGMLEGIDHFFKMLERRVCNRRAR*
Ga0182024_1171239323300014501PermafrostMDVSASARILADALNTASTSRAIPHEFRYHAKVLNDHLTEVLRSGMFEEIDHFFKMLERRVCNRRAR*
Ga0190272_1021110123300018429SoilMDVSASASIIANSLNTVSTSREIPHELRYHAKVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR
Ga0066667_1096460413300018433Grasslands SoilMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLAEVLRSGLFDDIDHFFKMLEAHVRNRRAR
Ga0066662_1108196713300018468Grasslands SoilSNVAEWTGVNPHAAKQAMDVSASASSIANSLNTVSISREIPHEFRYHAKVLNDHLADVLRSGLFDDIDQFFKMLEAHVRNRRAR
Ga0193743_101339853300019889SoilMDVSASASIIANSLNTVSTSREIPHELRYHAKVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAK
Ga0179594_1030922113300020170Vadose Zone SoilMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR
Ga0179592_1030874513300020199Vadose Zone SoilMDLSASTSSIANSLNTVSTTREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRSAR
Ga0179592_1037325923300020199Vadose Zone SoilMYLSVSTRIIANALNTASTSREIPHEFRYHAKVLNDRLAEVLRSGLFDDLDNFFKMLEAHVRNP
Ga0210395_1074734923300020582SoilMDLSASTRIIANALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHARNPGQG
Ga0210400_1025600823300021170SoilMDLSASTRIIANALNAASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHMRNAGQG
Ga0210408_1041224823300021178SoilMDVSASARMIAAALNAVSTSPEMPSEFRYHAQVLNEHLAEVLHSGMFDDIDNFFKLLEGRVCNRRTS
Ga0210408_1073708623300021178SoilMDLSASTRIIANALNAASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHARNPGQG
Ga0210389_1048573713300021404SoilMDLSASTRIIANALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHVRNPGQG
Ga0210389_1090330523300021404SoilMDLSASTRIIANALNTASTSREIPHEFRYHAKVLNDHLTDVLRSGLFDDLDNFFKMLEAHARNPGQG
Ga0210410_1023494243300021479SoilMDLSASTRIIANALNTASASREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKML
Ga0233356_101582013300023046SoilMDLSASAHIIANALNTASTSREIPHEFRYHATVLNDHLADVLRSGLFHDLDHFFKMLEAHVRNPGQG
Ga0179589_1046475313300024288Vadose Zone SoilMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFHDLDHFFKMLEAHVRNPGQG
Ga0207664_1095312913300025929Agricultural SoilMDVSVSASLIVSSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDRFFKMLEAHERNRRAR
Ga0207665_1005263933300025939Corn, Switchgrass And Miscanthus RhizosphereMDVSASARIIAAALNTVSTSREMPHEFRYHAKVLNDHLDEVLRSGMFDDIDDFFKLLQAVFEFRHIRSPQSL
Ga0207661_1035066423300025944Corn RhizosphereMDVSVSASLIANSLNTVSTSREIPHELRYHAKVLNDHLADVLRSGLFDGIDHFFKMLEAHERNRRAR
Ga0207698_1082601123300026142Corn RhizosphereLIASSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDRFFKMLEAHERNRRAR
Ga0209234_119461213300026295Grasslands SoilAMDVSASASSIANSLNTVSISREIPHEFRYHAKVLNDHLADVLRSGLFDDIDQFFKMLEAHVRNRRAR
Ga0209238_117139413300026301Grasslands SoilMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIEHFFKMLEAHVRNRRAR
Ga0209131_121374713300026320Grasslands SoilYLSVSTRIIANSLNTASTSHEIPHEFRYQAKVLNDRLAEVLRSGLFDDLDNFFKMLETHVRNPGQG
Ga0209158_124373823300026333SoilMDVSVSARIIANSLNTASTSREIPQEFCYHATVLNDHLAEVLRSGLFDDIDHFFKMLEAHVRNRRAR
Ga0179593_110124533300026555Vadose Zone SoilMYLSVSTRIIANSLNTASTSHEIPHEFRYQAKVLNDRLAEVLRSGLFDDLDNFFKMLETHVRNPGQG
Ga0208997_100570733300027181Forest SoilMDVSSSASSIANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLELHVRNRRAR
Ga0208993_102002813300027480Forest SoilMYLSVSTRIIANALNTASTSREIPHEFRYHAKVLNDRLAEVLRSGLFDDLDNFFKMLETHVRNPGQG
Ga0209419_100600243300027537Forest SoilMDVSASASSLANSLNTVSTSREIPHEFRYHAKVLNDQLADVLRSGLFDDIDHFCKMLEAHVRNRRAR
Ga0209735_106668313300027562Forest SoilMDLSASAHIIANALNTASTSREIPHEFRYHATVLNDHLAAVLRSGLFHDLDHFFKMLEAHVRNPGQG
Ga0209331_110954913300027603Forest SoilMDLSASTRIIANALNIASTSCEIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHVRNPGQG
Ga0209117_110050313300027645Forest SoilMDLSASTRIIANALNTASTSREIPHEFRYHAKVLNDHLADGLRSGLFDDLDNFFTMLEAHVRNPGQG
Ga0209736_100936623300027660Forest SoilMDVSASASSLANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFCKMLEAHVRNRRAR
Ga0209011_102353443300027678Forest SoilMDVSASASSLANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFHDLDHFFKMLEAHVRNRRAR
Ga0208991_100037513300027681Forest SoilANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLELHVRNRRAR
Ga0209178_134377613300027725Agricultural SoilTMDVSVSASLIVSSLNTVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDRFFKMLEAHERNRRAR
Ga0209624_1024761023300027895Forest SoilMDVSASARILADALNTASTSREIPHEFRYHAKVLNDHLTEVLRSGMFEDIDHFFKMLERRVCNRRAR
Ga0209488_1026220723300027903Vadose Zone SoilMDVSSSASSIANSLNTVSTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNR
Ga0209006_1023612033300027908Forest SoilMDLSASTCIIANALNTASTSREIPHEFRYHAKVLNDHLAEVLRSGLFDDLDNFFKMLEAHVRNPGQG
Ga0137415_1025690023300028536Vadose Zone SoilMDISASARILADALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDIDHFFKMLEAHVRNRRAR
Ga0137415_1033466513300028536Vadose Zone SoilMDLSASTHIIANALNTASTSREIPHEFRYHAKVLNDHLADVLRSGLFDDLDNFFKMLEAHVRNPGQA
Ga0307515_1056724913300028794EctomycorrhizaMDVSVSARIIANSLNTASTSREIPQEFRYHATVLNDHLADVLRSGLFDDIDHSFKMLEAHVRNRRAR
Ga0307501_1025368213300031152SoilMDVSVSARIIANSLNTASTSREIPQEFRNHATVLNDHLADVLRSGLFDDIDHFFEMLEAHVRNRRAR
Ga0335082_1112256313300032782SoilMVASASARIIAAALSEISSSCEMPPEFRYHAKVLNEHLTEVMCSGMFDDIDQFFKLLEGRDCDRGSP
Ga0310811_1006992723300033475SoilLRDGPQSTLTRRKQTMDVSVSASLIANSPNAVSTSRGIPHELRYHAKVLNDHLADVLRSGLFDGIDHFFKILEAHERNRGAR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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