Metagenome / Metatranscriptome Family F101618

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101618
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	50 residues
Representative Sequence	MHPLLFVNWSSVSSMFRGLMWIAAIVLAAVIVVHLVPATPPAHHAVRLMR
Number of Associated Samples	66
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.18 %
% of genes near scaffold ends (potentially truncated)	21.57 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.902 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (32.353 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.098 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.59% β-sheet: 0.00% Coil/Unstructured: 56.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00892	EamA	19.61
PF06271	RDD	10.78
PF07729	FCD	7.84
PF12698	ABC2_membrane_3	4.90
PF01068	DNA_ligase_A_M	2.94
PF02538	Hydantoinase_B	1.96
PF13650	Asp_protease_2	1.96
PF07883	Cupin_2	1.96
PF13191	AAA_16	0.98
PF00196	GerE	0.98
PF00903	Glyoxalase	0.98
PF00440	TetR_N	0.98
PF01966	HD	0.98
PF00589	Phage_integrase	0.98
PF13551	HTH_29	0.98
PF02096	60KD_IMP	0.98
PF13560	HTH_31	0.98
PF02452	PemK_toxin	0.98
PF01053	Cys_Met_Meta_PP	0.98
PF07702	UTRA	0.98
PF04679	DNA_ligase_A_C	0.98
PF01230	HIT	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	10.78
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	7.84
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	7.84
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	3.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.92
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.94
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.98
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.98
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.98
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.98
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.98
COG0706	Membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	0.98
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.98
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.98
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.98
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.98
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.98
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
All Organisms	root	All Organisms	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
cellular organisms	root	All Organisms → cellular organisms	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.33 %
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.86 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.98 %
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.98 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.98 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.98 %
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.98 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.96 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.98 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	1.96 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	0.98 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.90 %
Solirubrobacter sp. CPCC 204708	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	0.98 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.98 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	0.98 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.98 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.98 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.98 %
bacterium HR12	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS402GJW5P	Not Available	507	Open in IMG/M
3300001546\|JGI12659J15293_10044997	Not Available	1026	Open in IMG/M
3300005437\|Ga0070710_10380276	All Organisms → cellular organisms → Bacteria → Terrabacteria group	942	Open in IMG/M
3300005529\|Ga0070741_10115571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2791	Open in IMG/M
3300005529\|Ga0070741_10924838	Not Available	753	Open in IMG/M
3300005529\|Ga0070741_11275331	Not Available	616	Open in IMG/M
3300005532\|Ga0070739_10047205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2849	Open in IMG/M
3300005610\|Ga0070763_10849284	Not Available	541	Open in IMG/M
3300005921\|Ga0070766_10840417	Not Available	627	Open in IMG/M
3300005921\|Ga0070766_10967403	Not Available	585	Open in IMG/M
3300006175\|Ga0070712_101255030	Not Available	645	Open in IMG/M
3300006176\|Ga0070765_100143558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2121	Open in IMG/M
3300006755\|Ga0079222_12191331	Not Available	549	Open in IMG/M
3300009698\|Ga0116216_10204383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1211	Open in IMG/M
3300010152\|Ga0126318_10214848	Not Available	577	Open in IMG/M
3300010361\|Ga0126378_12805884	Not Available	556	Open in IMG/M
3300010371\|Ga0134125_12462507	Not Available	566	Open in IMG/M
3300010373\|Ga0134128_12133054	Not Available	617	Open in IMG/M
3300010396\|Ga0134126_11247163	Not Available	825	Open in IMG/M
3300010396\|Ga0134126_11428699	Not Available	764	Open in IMG/M
3300011404\|Ga0153951_1080304	Not Available	595	Open in IMG/M
3300016319\|Ga0182033_11486004	Not Available	611	Open in IMG/M
3300016422\|Ga0182039_11476745	Not Available	619	Open in IMG/M
3300017937\|Ga0187809_10084985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300017961\|Ga0187778_10027447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3477	Open in IMG/M
3300017966\|Ga0187776_11336443	Not Available	543	Open in IMG/M
3300017966\|Ga0187776_11468008	Not Available	522	Open in IMG/M
3300017972\|Ga0187781_11430865	Not Available	512	Open in IMG/M
3300017973\|Ga0187780_11330073	Not Available	529	Open in IMG/M
3300017993\|Ga0187823_10234178	Not Available	615	Open in IMG/M
3300017994\|Ga0187822_10262419	Not Available	597	Open in IMG/M
3300018060\|Ga0187765_10071897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1829	Open in IMG/M
3300018468\|Ga0066662_12534406	Not Available	541	Open in IMG/M
3300020582\|Ga0210395_10133199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1850	Open in IMG/M
3300020582\|Ga0210395_10136704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1825	Open in IMG/M
3300021171\|Ga0210405_10334390	Not Available	1196	Open in IMG/M
3300021374\|Ga0213881_10310275	Not Available	705	Open in IMG/M
3300021377\|Ga0213874_10100024	Not Available	963	Open in IMG/M
3300021377\|Ga0213874_10133405	Not Available	854	Open in IMG/M
3300021377\|Ga0213874_10187241	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300021377\|Ga0213874_10339866	Not Available	573	Open in IMG/M
3300021384\|Ga0213876_10072240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1822	Open in IMG/M
3300021388\|Ga0213875_10079124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1533	Open in IMG/M
3300021388\|Ga0213875_10490534	Not Available	590	Open in IMG/M
3300021402\|Ga0210385_10174125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1553	Open in IMG/M
3300021402\|Ga0210385_10309591	Not Available	1172	Open in IMG/M
3300021406\|Ga0210386_11198858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300021407\|Ga0210383_10391702	Not Available	1198	Open in IMG/M
3300021407\|Ga0210383_10793154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	811	Open in IMG/M
3300021474\|Ga0210390_10897852	Not Available	729	Open in IMG/M
3300022467\|Ga0224712_10445992	Not Available	621	Open in IMG/M
3300027117\|Ga0209732_1091914	Not Available	528	Open in IMG/M
3300027773\|Ga0209810_1135194	Not Available	1049	Open in IMG/M
3300027857\|Ga0209166_10326241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	805	Open in IMG/M
3300027889\|Ga0209380_10346920	Not Available	872	Open in IMG/M
3300027895\|Ga0209624_10048176	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2725	Open in IMG/M
3300027895\|Ga0209624_10090764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1988	Open in IMG/M
3300030494\|Ga0310037_10098102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1360	Open in IMG/M
3300031543\|Ga0318516_10570834	Not Available	647	Open in IMG/M
3300031561\|Ga0318528_10149996	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1241	Open in IMG/M
3300031715\|Ga0307476_10067381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2474	Open in IMG/M
3300031744\|Ga0306918_10310879	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1216	Open in IMG/M
3300031770\|Ga0318521_10337846	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium HR12	891	Open in IMG/M
3300031771\|Ga0318546_10949671	Not Available	605	Open in IMG/M
3300031896\|Ga0318551_10225389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300031910\|Ga0306923_10176637	All Organisms → cellular organisms → Bacteria	2439	Open in IMG/M
3300032052\|Ga0318506_10447793	Not Available	573	Open in IMG/M
3300032055\|Ga0318575_10259473	All Organisms → cellular organisms → Bacteria → Terrabacteria group	877	Open in IMG/M
3300032770\|Ga0335085_10085779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4116	Open in IMG/M
3300032770\|Ga0335085_10418726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1550	Open in IMG/M
3300032770\|Ga0335085_11520868	Not Available	696	Open in IMG/M
3300032782\|Ga0335082_11673540	Not Available	510	Open in IMG/M
3300032783\|Ga0335079_10013684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9272	Open in IMG/M
3300032783\|Ga0335079_10315841	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1701	Open in IMG/M
3300032805\|Ga0335078_10020095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9926	Open in IMG/M
3300032805\|Ga0335078_10154155	Not Available	3246	Open in IMG/M
3300032805\|Ga0335078_10875838	Not Available	1082	Open in IMG/M
3300032805\|Ga0335078_11082375	Not Available	940	Open in IMG/M
3300032805\|Ga0335078_11501013	Not Available	753	Open in IMG/M
3300032828\|Ga0335080_10010937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9535	Open in IMG/M
3300032828\|Ga0335080_10705554	Not Available	1051	Open in IMG/M
3300032828\|Ga0335080_11489635	Not Available	670	Open in IMG/M
3300032892\|Ga0335081_10038668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7594	Open in IMG/M
3300032892\|Ga0335081_10053488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6304	Open in IMG/M
3300032892\|Ga0335081_11438970	Not Available	767	Open in IMG/M
3300032892\|Ga0335081_11621292	Not Available	710	Open in IMG/M
3300032892\|Ga0335081_11791758	Not Available	664	Open in IMG/M
3300032895\|Ga0335074_10001715	All Organisms → cellular organisms → Bacteria	29578	Open in IMG/M
3300032895\|Ga0335074_10007426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15201	Open in IMG/M
3300032895\|Ga0335074_10104347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3723	Open in IMG/M
3300032895\|Ga0335074_10188043	Not Available	2542	Open in IMG/M
3300032895\|Ga0335074_10266272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	1998	Open in IMG/M
3300032895\|Ga0335074_10381521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1543	Open in IMG/M
3300032896\|Ga0335075_10038590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6793	Open in IMG/M
3300032896\|Ga0335075_10217928	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2251	Open in IMG/M
3300032896\|Ga0335075_11540288	Not Available	551	Open in IMG/M
3300032898\|Ga0335072_10100914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3691	Open in IMG/M
3300032898\|Ga0335072_10421967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1420	Open in IMG/M
3300032954\|Ga0335083_10080399	Not Available	3287	Open in IMG/M
3300033134\|Ga0335073_10226030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2302	Open in IMG/M
3300033134\|Ga0335073_10507921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	1374	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.16%
Host-Associated	Host-Associated	7.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.24%
Plants	Host-Associated → Plants	6.86%
Aquatic	Environmental → Aquatic	3.92%
Fungi	Host-Associated → Fungi	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.25%
Roots	Host-Associated → Plants → Roots	6.86%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.98%
Mycelium	Host-Associated → Fungi → Mycelium	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.24%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	38.24%
Loam	Environmental → Terrestrial → Soil → Loam	10.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	6.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	38.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.82%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	6.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	32.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	6.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_08187920	2189573004	Grass Soil	SLFRGLMWIMAIALAAVIIVHLVPATQSAHHAVRMMR
JGI12659J15293_100449972	3300001546	Forest Soil	MHPLLFVNWSSVNALFRGLMWITAIVLAGVIVTHLVPATPSVHHTIRMMR*
Ga0070710_103802762	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHPLLFVNWSSVSSMFRGLMWIMAIALAAVIVVHVVPTAHSAHHAVRLMR*
Ga0070741_101155713	3300005529	Surface Soil	MHPLLFVNWSSVSSRFRGLMWIVAIALAAVIIVHLVPTAPSPHHAVRLTR*
Ga0070741_109248381	3300005529	Surface Soil	MHPLLFVNWSSVSSMFRGLMWIVAIALAALIVVHLVPAAHQAHHAVRLMR*
Ga0070741_112753311	3300005529	Surface Soil	MHPLLFVNWSSVSSMFRGLMWIVAIVLAGVIIVHLVPATPSAHHAVRLMR*
Ga0070739_100472051	3300005532	Surface Soil	MHPLLFVNWSSVSSMFRGLMWIAAIVLAAVIVVHLVPATPPAHHAVRLMR*
Ga0070763_108492841	3300005610	Soil	MHPLLFVNWSSVNKLFRGLMWLCVIVLATVIVVYLMPDPAAAHHSMRVLR*
Ga0070766_108404172	3300005921	Soil	MRPFLFVNWSSVNRMFRGLMWLCAIALATVIVVHLIPASAPAHHSMRLLR*
Ga0070766_109674031	3300005921	Soil	MHPLLFVNWASVSRVFRGLMWLVAIVLAGVIAVHLVPAAPTVHH
Ga0070712_1012550302	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LMGPLMFVNWSSVSSMFRGLMWIVAIVLAGLIVIHLMPMASEVRHSTRMLR*
Ga0070765_1001435583	3300006176	Soil	MHPLLFVNWASVSRVFRGLMWLVAIVLAGVIAVHLVPAAPTVHHTARLLR*
Ga0079222_121913312	3300006755	Agricultural Soil	MHPLLFVNWSSVSSMFRGLMWIVAIALAAVIIVHLVPTAPSAHHAVRLMR*
Ga0116216_102043832	3300009698	Peatlands Soil	MHPLLFVNWSSVNRMFRGLMWLCAIALATVVVVHLIPASAPAHHSMRVQR*
Ga0126318_102148481	3300010152	Soil	MHPLLFVNWSSVSSMFRGLMWIVAVALAAVIVVHLVPTAHSAHHAVRLMR*
Ga0126378_128058841	3300010361	Tropical Forest Soil	MKGILMGPLMFVNWSSVSSKFRGLMWIVAILLAGLIVVHLMPVAAQPNHTTR
Ga0134125_124625071	3300010371	Terrestrial Soil	MHPLLFVNWSSVSSMFRGLMWIVAIALAAVIVVHLVPTAHSAHHAVPLMR*
Ga0134128_121330541	3300010373	Terrestrial Soil	MHPLLFVNWSWVSSMFRGLMWIVAIALAAVIVVHLVPTAHQAHHAVRLMR*
Ga0134126_112471632	3300010396	Terrestrial Soil	MPPLLFVNWSSVSSMFRGLMWIMAIALAAVIVVHLVPTAHSAHHAVRLMR*
Ga0134126_114286991	3300010396	Terrestrial Soil	MHPLLFVNWSSVSSMFRGLMWIMAIALAAVIVVHLVPSAPSAHHAVRLMR*
Ga0153951_10803042	3300011404	Attine Ant Fungus Gardens	MFRGLMWIAAIVLASVIVIHLVPGSHPAHHSVQVLR*
Ga0182033_114860041	3300016319	Soil	VSSMFRGLMWIVAIALAGVIIIHLMPDMSSAHHAATRLMR
Ga0182039_114767452	3300016422	Soil	MHPLQFVNWSSVSSMFRGLMWIAAIVLAGVIIIHLMPDAPSAHHAATRLMR
Ga0187809_100849852	3300017937	Freshwater Sediment	MHPLLFVNWSSVNRMFRGLMWLCAIALATVIVVHLIPGSAPAHHPVRVLR
Ga0187778_100274475	3300017961	Tropical Peatland	MQPLLFVNWSSVNVMFRGLMWVVAIVLAGVNVTHLAAMTAPVHHSIRTMR
Ga0187776_113364431	3300017966	Tropical Peatland	MHPLLFVNWSSVNKMFRGLMWLCVNAVATVIVVHLLPASTPAHHAVHVLR
Ga0187776_114680082	3300017966	Tropical Peatland	MHPLLFVNWSSVNRMFRGLMWLCAIAIATVIVVHLIPTSAPVHHSMRILR
Ga0187781_114308652	3300017972	Tropical Peatland	MQPLLFVNWSSENVMFRGLMWVVASVLAGMIVLHLAAMTAPVHHSIRTIR
Ga0187780_113300732	3300017973	Tropical Peatland	MQPLLFVNWSSVNVMFRGLMWVVAIVLAGVNVTHLAAMTAPVHH
Ga0187823_102341782	3300017993	Freshwater Sediment	MHPLLFVNWSSVSSMFRGLMWIVAIALAAVIVVHLVPSAHQA
Ga0187822_102624192	3300017994	Freshwater Sediment	MHPLLFVNWSSVNSMFRGLMWLCAIALATAIVVHLVPASEPVHHSIRVLR
Ga0187765_100718973	3300018060	Tropical Peatland	MHPLLFVNWSSVNRMFRGLMWLCAIALATVIVIHLIPASAPVHHSIRVLR
Ga0066662_125344061	3300018468	Grasslands Soil	MHPLLFVNWSSVNSLFRGLMWIVAIVLAAVIVIHLMPATPPGHHAVRLMH
Ga0210395_101331991	3300020582	Soil	MHPLLFVNWSSVNGMFRGLMWIVAIVLAGVVVTHLVPAAPAVHHAIR
Ga0210395_101367042	3300020582	Soil	MRPFLFVNWSSVNRMFRGLMWLCAIALATVIVVHLIPASAPPHHSMRLLR
Ga0210395_112455012	3300020582	Soil	MHPLLFVNWSSVNALFRGLMWITAIVLAGVIVTHLVPAT
Ga0210405_103343902	3300021171	Soil	MRPFLFVNWSSVNRMFRGLMWLCAIALATVIVVHLIPASAPAHHSMRLLR
Ga0213881_103102752	3300021374	Exposed Rock	MHPLLFVNWSWVSSLFRGLMWIMALVLATVILIHLVPMTSVAHHATRTMR
Ga0213874_101000241	3300021377	Plant Roots	MNPLLFVNWRAVSSMFRGLMWLIAIVLAGVIVVHLLATTPAHHATQLLR
Ga0213874_101334052	3300021377	Plant Roots	MHPLLFVNWSWVSALFRGLMWIVVVVLAGVIVIHLLSVGPEVHHSVRSLR
Ga0213874_101872412	3300021377	Plant Roots	MNPLLFVNWYSVNSIFRVLMWLIAIGLAGVIVLHLISTTPPVHHTTQLMR
Ga0213874_103398662	3300021377	Plant Roots	MHPLLFVNWSSVNALFRGLMWLVVIVLACVVMMHLMSAAAPVHHSLRAIR
Ga0213876_100722402	3300021384	Plant Roots	MHPLLFVNWSSVSSKFRGLMWIVAIALAAVIVVHLVPAAPAHHAVRLMR
Ga0213875_100791243	3300021388	Plant Roots	MHPLLFVNWSSVSSMFRGLMWIVAIVLIGVIVVHLVPATPETHHALRLMR
Ga0213875_104905341	3300021388	Plant Roots	RDGKETMHPLLFVNWSWVSSLFRGLMWIMALVLATVILIHLVPMTSVAHHATRTMR
Ga0210385_101741253	3300021402	Soil	MHPLLFVNWSSVNKLFRGLMWLCVIVLATVIVVYLMPDPAAAHHSMRVLR
Ga0210385_103095912	3300021402	Soil	MHPLLFVNWSSVSRMFRGLMWLCAIALATVIVVHLIPASPPAHDAIRVLR
Ga0210386_111988582	3300021406	Soil	MRPFLFVNWSSVNRMFRGLMWLCAIALATVIVIHLIPASAPVHHSV
Ga0210383_103917021	3300021407	Soil	VGGEREPMHPLLFVNWSSVSRMFRGLMWLCAIALATVIVVHLIPASPPAHDAIRVLR
Ga0210383_107931542	3300021407	Soil	MRPLLFVNWSSVNRMFRGLMWLCAIALATVIVVHLIPASAPAHHSMRLLR
Ga0210390_108978521	3300021474	Soil	FRGLMWITAIVLAGVIVTHLVPATPSVHHTIRMMR
Ga0224712_104459922	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	RPGSRRSTRIEREKMHPLLFVNWRSVSSMFRGLMWIMAIALAAVIVVHLVPTAHTAHHAARLMR
Ga0209732_10919141	3300027117	Forest Soil	SKEPMHPLLFVNWSSVNALFRGLMWITAIVLAGVIVTHLVPATPSVHHTIRMMR
Ga0209810_11351941	3300027773	Surface Soil	MHPLLFVNWSSVSSMFRGLMWIAAIVLAAVIVVHLVPATPPAHHAVRLMR
Ga0209166_103262411	3300027857	Surface Soil	MRPLLFVNWSSVSSKFRGLMWIVAIVLAAVIVVHLV
Ga0209380_103469203	3300027889	Soil	MHPLLFVNWASVSRVFRGLMWLVAIVLAGVIAVHLVPAAPTVHHTARLLR
Ga0209624_100481762	3300027895	Forest Soil	MHPLLFVNWSSVNALFRGLMWITAIVLAGVIVTHLVPATPSVHHTIRMMR
Ga0209624_100907643	3300027895	Forest Soil	MHPLLFVNWSSVNGMFRGLMWIVAIVLAGVVVTHLVPAAPAVHHAIRVQR
Ga0310037_100981022	3300030494	Peatlands Soil	MTAPAANSGRKDPMHPLLFVNWSSVNRMFRGLMWLCAIALATVVVVHLIPASAPAHHSMRVQR
Ga0318516_105708342	3300031543	Soil	MHPLQFVNWSSVSSMFRGLMWIVAIALAGVIIIHLMPDMSSAHHAATRLMR
Ga0318528_101499962	3300031561	Soil	MHPLLFVNWSSVSKMFRGLMWIVAIALAGVIIIHLMPDTSSAHHAATRLMR
Ga0307476_100673815	3300031715	Hardwood Forest Soil	MRPLLFVNWSSVNRMFRGLMWLCAIALATVIVVHLIPASAPPHHSMRLLR
Ga0306918_103108793	3300031744	Soil	MHPLQFVNWSSVSSMFRGLMWIVAIALASVIIIHLMPDMSSAHHAATRLMR
Ga0318521_103378461	3300031770	Soil	MHPLQFVNWSSVSSMFRGLMWIVAIALAGVIIVHLMPDTSSAHHAATRLMR
Ga0318546_109496712	3300031771	Soil	SSVSSMFRGLMWIVAIALAGVIIIHLMPDMSSAHHAATRLMR
Ga0318551_102253892	3300031896	Soil	MHPLQFVNWSSVSSMFRGLMWIVAIALAGVIIIHLMPDTSSAHHAATRLMR
Ga0306923_101766371	3300031910	Soil	TMHPLQFVNWSSVSSMFRGLMWIVAIALAGVIIIHLMPDTSSAHHAATRLMR
Ga0318506_104477931	3300032052	Soil	MHPLQFVNWSSVSSMFRGLMWIVAIALAGVIIIHLMPDVSSAHHAATRLMR
Ga0318575_102594731	3300032055	Soil	VNWSSVSSMFRGLMWIVAIALAGVIIIHLMPDMSSAHHAATRLMR
Ga0335085_100857794	3300032770	Soil	MGPLMFVNWSSVSSMFRGLMWIVAIVLAGLIVIHLMPMASEAHHTARLMR
Ga0335085_104187262	3300032770	Soil	MHPLLFVNWASVSRMFRALMWLAAIALAAVLVIHLVPAEPAAHHTARMLR
Ga0335085_115208681	3300032770	Soil	MHPLLFVNWSWVNRMFRGLMWLCAIALATVIVVHLIPASAPAHHAMRVLR
Ga0335082_116735402	3300032782	Soil	SSVSSMFRGLMWIVAIVLAGVIVVHLVPASPSAHHAVRLMR
Ga0335079_100136848	3300032783	Soil	MHPLLFVNWSSVNRLFRGLMWLCAIALATVIVVHLIPASAPAHHTMRVLR
Ga0335079_103158411	3300032783	Soil	ETMQPLLFVNWASVSRMFRGLMWLAAIVLAAVIVIDLVPATPAAHHTARLMR
Ga0335078_100200952	3300032805	Soil	MRPLLFVNWSSVNAMFRGLMWLCAIALATVIVVHLIPASPPAHHAVHLLR
Ga0335078_101541554	3300032805	Soil	MGPWPRIGLRSERGRKETMQPLLFVNWASVSRMFRGLMWLAAIVLAAVIVIDLVPATPAAHHTARLMR
Ga0335078_108758383	3300032805	Soil	RKETMHPLLFVNWASVSRMFRALMWLAAIALAAVLVIHLVPAEPAAHHTARMLR
Ga0335078_110823752	3300032805	Soil	MMGPLMFVNWSSVSSMFRGLMWIVAIVLAGLIVVHLMPVASEAHHTTRLIR
Ga0335078_115010131	3300032805	Soil	MRPLLFVNWSSVSSMFRGLMWLAAVVLAAVIVVHLVPSAPPAHHVVRMMR
Ga0335080_100109372	3300032828	Soil	MGPLMFVNWSSVSSMFRGLMWIVAIVLAGLIVVHLMPVASEAHHTTRLIR
Ga0335080_107055543	3300032828	Soil	RTDRGRKETMHPLLFVNWSSVNVMFRSLMWLVAIVLAGILVVHLVPATPAVHHTARVLR
Ga0335080_114896352	3300032828	Soil	MHPLLFVNWSSVNVMFRGLMWLVAIVLAGILVVHLVPATPAVHHTARVLR
Ga0335081_100386682	3300032892	Soil	MHPLLFVNWASVNRMFRGLMWLAAIVLAAVIVIHLVPATPAAHHTARLLR
Ga0335081_100534889	3300032892	Soil	MHPLLFVNWASVSRMFRGLMWLVAIVLAGVIVIHLVPATPAAHHTARLLR
Ga0335081_114389701	3300032892	Soil	MQPLLFVNWASVSRMFRGLMWLAAIVLAAVIVIDLVPATPAAHHTARLMR
Ga0335081_116212922	3300032892	Soil	MHPLLFVNWSSVSAMFRALMWIVAIVLVGVIVVHLVPSSPPAHHAIRLMR
Ga0335081_117917582	3300032892	Soil	MHPLLFVNWCSVNRMFRGLMWLCAIALAAVIVVHLTASPTPPHHAIRVLR
Ga0335074_100017159	3300032895	Soil	MRPLLFVNWSSVNGMFRGLMWVVVIVLAAVIALHLMAAAPPAHHSARILR
Ga0335074_100074264	3300032895	Soil	MQPLLFVNWSWVNAMFRGLMWIVAIVLAALIVIHFVPATAPVHHSIRIMR
Ga0335074_101043473	3300032895	Soil	MHPLLFVNWSSVNGMFRGLMWIIAIVLVGVIAVHLVPAGASVHHSVRVLR
Ga0335074_101880434	3300032895	Soil	MHPLLFVNWSSVSRMFRGLMWLCAIALAAVIVVHLIPASPPAHHAIRVLR
Ga0335074_102662722	3300032895	Soil	MRPLLFVNWSSVNGMFRALMWIAVIVLVGVIAVHFMAATPPAHHSAQMLR
Ga0335074_103815211	3300032895	Soil	MHPLLFVNWARVSRMFRGLMWLAAIALAAVIVVHLVPASAPAQHTVRILR
Ga0335075_1003859010	3300032896	Soil	MHPLLFVNWSSVNVMFRGLMWIVAIVLVGVIVTHLIPATPPMHHSVRPIR
Ga0335075_102179282	3300032896	Soil	MHPLLFVNWSSVNGMFRGLMWIIAIVLVGVIAVHLVPTGASVHHSVRVLR
Ga0335075_115402881	3300032896	Soil	MQPLLFVNWSWVNAMFRGLMWIVAIVLAALIVIHFVPATAPVHHSIRIIR
Ga0335072_101009143	3300032898	Soil	MHPLLFVNWSSVNRMFRGLMWLCAIALAAAIVVHLTASPPPAHHAVRALR
Ga0335072_104219673	3300032898	Soil	TRKMGPRARIGLWSDRGRKETMHPLLFVNWASVSRMFRALMWLAAIALAAVLVIHLVPAEPAAHHTARMLR
Ga0335083_100803996	3300032954	Soil	MKGKMMGPLMFVNWSSVSSMFRGLMWIVAIVLAGLIVVHLMPVASEAHHTTRLIR
Ga0335073_102260304	3300033134	Soil	MHPLLFVNWSWVNRMFRGLMWLCAIALATVIVIHLIPTSAPVHHSMPVLR
Ga0335073_105079212	3300033134	Soil	MHPLLFVNWARVSRMFRGLMWLAAIALAAVIVVHLIPASAPAQHTVRILR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101618

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences