Metagenome / Metatranscriptome Family F101606

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101606
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	94 residues
Representative Sequence	TLEEAFGIGTDPNFLPAAQAHWRAGTGGNPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLAPDDPSFVDAGALCDCQKDPPVGTPALDCRP
Number of Associated Samples	85
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.00 %
% of genes near scaffold ends (potentially truncated)	95.10 %
% of genes from short scaffolds (< 2000 bps)	96.08 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.804 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (14.706 % of family members)
Environment Ontology (ENVO)	Unclassified (37.255 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.059 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.50% β-sheet: 0.00% Coil/Unstructured: 59.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01568	Molydop_binding	4.90
PF04185	Phosphoesterase	4.90
PF12833	HTH_18	4.90
PF00488	MutS_V	3.92
PF00892	EamA	2.94
PF08281	Sigma70_r4_2	1.96
PF12680	SnoaL_2	1.96
PF11578	DUF3237	1.96
PF07993	NAD_binding_4	1.96
PF13540	RCC1_2	1.96
PF06314	ADC	0.98
PF01979	Amidohydro_1	0.98
PF01042	Ribonuc_L-PSP	0.98
PF07992	Pyr_redox_2	0.98
PF13087	AAA_12	0.98
PF04226	Transgly_assoc	0.98
PF01431	Peptidase_M13	0.98
PF00211	Guanylate_cyc	0.98
PF00296	Bac_luciferase	0.98
PF04828	GFA	0.98
PF02894	GFO_IDH_MocA_C	0.98
PF07366	SnoaL	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	4.90
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	3.92
COG1193	dsDNA-specific endonuclease/ATPase MutS2	Replication, recombination and repair [L]	3.92
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.98
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.98
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.98
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.98
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.98
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.98
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.80 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.80 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.80 %
Unclassified	root	N/A	40.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.94 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	12.75 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.96 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.98 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	12.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.96 %
Salinisphaerales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Salinisphaerales	1.96 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.98 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.98 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	6.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.94 %
Gammaproteobacteria bacterium 45_16_T64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium 45_16_T64	1.96 %
Salinisphaeraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Salinisphaerales → Salinisphaeraceae	1.96 %
Sedimentisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Sedimentisphaerales	0.98 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.98 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.98 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.86 %
unclassified Salinisphaeraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Salinisphaerales → Salinisphaeraceae → unclassified Salinisphaeraceae	1.96 %
Gammaproteobacteria bacterium 45_16_T64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium 45_16_T64	1.96 %
Sedimentisphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Sedimentisphaerales → Sedimentisphaeraceae	0.98 %
Candidatus Aminicenantes bacterium RBG_16_66_30	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_66_30	0.98 %
Phyllobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	0.98 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.98 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.98 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.86 %
Salinisphaeraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Salinisphaerales → Salinisphaeraceae → unclassified Salinisphaeraceae → Salinisphaeraceae bacterium	1.96 %
Gammaproteobacteria bacterium 45_16_T64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium 45_16_T64	1.96 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.98 %
Sedimentisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Sedimentisphaerales → Sedimentisphaeraceae → Sedimentisphaera	0.98 %
unclassified Phyllobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → unclassified Phyllobacterium	0.98 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.98 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.98 %
Candidatus Aminicenantes bacterium RBG_16_66_30	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_66_30	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.86 %
Salinisphaeraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Salinisphaerales → Salinisphaeraceae → unclassified Salinisphaeraceae → Salinisphaeraceae bacterium	1.96 %
Gammaproteobacteria bacterium 45_16_T64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium 45_16_T64	1.96 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.98 %
Sedimentisphaera salicampi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Sedimentisphaerales → Sedimentisphaeraceae → Sedimentisphaera → Sedimentisphaera salicampi	0.98 %
Phyllobacterium sp. YR531	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → unclassified Phyllobacterium → Phyllobacterium sp. YR531	0.98 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.98 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.98 %
Candidatus Aminicenantes bacterium RBG_16_66_30	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_66_30	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.20 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	6.86 %
Salinisphaeraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Salinisphaerales → Salinisphaeraceae → unclassified Salinisphaeraceae → Salinisphaeraceae bacterium	1.96 %
Gammaproteobacteria bacterium 45_16_T64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium 45_16_T64	1.96 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.98 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.98 %
Sedimentisphaera salicampi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Sedimentisphaerales → Sedimentisphaeraceae → Sedimentisphaera → Sedimentisphaera salicampi	0.98 %
Phyllobacterium sp. YR531	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → unclassified Phyllobacterium → Phyllobacterium sp. YR531	0.98 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.98 %
Candidatus Aminicenantes bacterium RBG_16_66_30	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_66_30	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_101687976	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300004156\|Ga0062589_102056159	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300004463\|Ga0063356_103394274	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005093\|Ga0062594_101981140	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005295\|Ga0065707_10312596	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005328\|Ga0070676_10492481	All Organisms → cellular organisms → Bacteria → Proteobacteria	869	Open in IMG/M
3300005332\|Ga0066388_101662062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1128	Open in IMG/M
3300005332\|Ga0066388_102873947	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005347\|Ga0070668_100835331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	820	Open in IMG/M
3300005347\|Ga0070668_102051696	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005353\|Ga0070669_101142932	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005355\|Ga0070671_100687105	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300005356\|Ga0070674_100299622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1281	Open in IMG/M
3300005363\|Ga0008090_10049900	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300005444\|Ga0070694_101870056	Not Available	512	Open in IMG/M
3300005458\|Ga0070681_11773228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Salinisphaerales → Salinisphaeraceae → unclassified Salinisphaeraceae → Salinisphaeraceae bacterium	544	Open in IMG/M
3300005467\|Ga0070706_102004127	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005539\|Ga0068853_101919408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	574	Open in IMG/M
3300005549\|Ga0070704_100426287	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Sedimentisphaerales → Sedimentisphaeraceae → Sedimentisphaera → Sedimentisphaera salicampi	1137	Open in IMG/M
3300005549\|Ga0070704_102234253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → unclassified Phyllobacterium → Phyllobacterium sp. YR531	509	Open in IMG/M
3300005713\|Ga0066905_100329563	All Organisms → cellular organisms → Bacteria → Proteobacteria	1211	Open in IMG/M
3300005719\|Ga0068861_100930946	Not Available	825	Open in IMG/M
3300005719\|Ga0068861_101680038	Not Available	627	Open in IMG/M
3300005764\|Ga0066903_101499021	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300005843\|Ga0068860_101577638	Not Available	678	Open in IMG/M
3300005843\|Ga0068860_102262558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium 45_16_T64	564	Open in IMG/M
3300005844\|Ga0068862_100248282	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300006175\|Ga0070712_101575896	Not Available	574	Open in IMG/M
3300006358\|Ga0068871_101910305	Not Available	564	Open in IMG/M
3300006844\|Ga0075428_100882780	All Organisms → cellular organisms → Bacteria → Proteobacteria	949	Open in IMG/M
3300006844\|Ga0075428_101804124	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006852\|Ga0075433_11205861	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006852\|Ga0075433_11342272	Not Available	619	Open in IMG/M
3300006853\|Ga0075420_101905578	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300006954\|Ga0079219_12220613	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300007076\|Ga0075435_100463588	Not Available	1093	Open in IMG/M
3300009100\|Ga0075418_12418858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Salinisphaerales → Salinisphaeraceae → unclassified Salinisphaeraceae → Salinisphaeraceae bacterium	573	Open in IMG/M
3300009156\|Ga0111538_10742978	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	1243	Open in IMG/M
3300009168\|Ga0105104_10667874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	595	Open in IMG/M
3300009690\|Ga0116143_10605252	Not Available	537	Open in IMG/M
3300010043\|Ga0126380_10724502	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300010043\|Ga0126380_11374056	Not Available	619	Open in IMG/M
3300010043\|Ga0126380_11438075	Not Available	607	Open in IMG/M
3300010046\|Ga0126384_10695883	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300010046\|Ga0126384_11882035	Not Available	570	Open in IMG/M
3300010047\|Ga0126382_10248526	Not Available	1302	Open in IMG/M
3300010356\|Ga0116237_11423362	Not Available	570	Open in IMG/M
3300010358\|Ga0126370_11566377	Not Available	629	Open in IMG/M
3300010359\|Ga0126376_10094977	Not Available	2257	Open in IMG/M
3300010359\|Ga0126376_13221961	Not Available	505	Open in IMG/M
3300010361\|Ga0126378_11537468	Not Available	755	Open in IMG/M
3300010361\|Ga0126378_11553916	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300010361\|Ga0126378_12837423	Not Available	553	Open in IMG/M
3300010362\|Ga0126377_12346094	Not Available	610	Open in IMG/M
3300010366\|Ga0126379_10743224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1077	Open in IMG/M
3300010397\|Ga0134124_11247399	Not Available	765	Open in IMG/M
3300010397\|Ga0134124_12501903	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010400\|Ga0134122_10725167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	938	Open in IMG/M
3300012905\|Ga0157296_10417349	Not Available	507	Open in IMG/M
3300012971\|Ga0126369_13669660	Not Available	503	Open in IMG/M
3300013306\|Ga0163162_10400425	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300013308\|Ga0157375_13633270	Not Available	513	Open in IMG/M
3300014745\|Ga0157377_10876434	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300014968\|Ga0157379_11908443	Not Available	585	Open in IMG/M
3300014969\|Ga0157376_11590868	Not Available	688	Open in IMG/M
3300015374\|Ga0132255_101129207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1179	Open in IMG/M
3300016319\|Ga0182033_11920808	Not Available	538	Open in IMG/M
3300016404\|Ga0182037_10231444	Not Available	1452	Open in IMG/M
3300019356\|Ga0173481_10691110	Not Available	550	Open in IMG/M
3300019360\|Ga0187894_10206062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	957	Open in IMG/M
3300025923\|Ga0207681_10498021	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300025931\|Ga0207644_11247410	Not Available	625	Open in IMG/M
3300025937\|Ga0207669_10472556	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300025945\|Ga0207679_11726833	Not Available	572	Open in IMG/M
3300025960\|Ga0207651_10311384	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300025972\|Ga0207668_10770325	Not Available	850	Open in IMG/M
3300026041\|Ga0207639_11257759	Not Available	695	Open in IMG/M
3300026088\|Ga0207641_10913782	Not Available	872	Open in IMG/M
3300026088\|Ga0207641_12251742	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300026088\|Ga0207641_12362587	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300026118\|Ga0207675_100837161	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300028380\|Ga0268265_10859712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	888	Open in IMG/M
3300028381\|Ga0268264_11985651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium 45_16_T64	591	Open in IMG/M
3300028812\|Ga0247825_10740296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	708	Open in IMG/M
3300031548\|Ga0307408_101667544	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300031679\|Ga0318561_10171507	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300031716\|Ga0310813_12357150	Not Available	505	Open in IMG/M
3300031723\|Ga0318493_10819796	Not Available	525	Open in IMG/M
3300031736\|Ga0318501_10245192	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300031740\|Ga0307468_102218250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300031793\|Ga0318548_10522178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300031910\|Ga0306923_10117806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3010	Open in IMG/M
3300031944\|Ga0310884_10859799	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	558	Open in IMG/M
3300031946\|Ga0310910_11088550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	623	Open in IMG/M
3300032180\|Ga0307471_102237842	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300032261\|Ga0306920_101104535	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300032770\|Ga0335085_12584427	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium RBG_16_66_30	502	Open in IMG/M
3300032782\|Ga0335082_11394644	Not Available	571	Open in IMG/M
3300033004\|Ga0335084_12224205	Not Available	531	Open in IMG/M
3300034178\|Ga0364934_0252100	Not Available	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.86%
Host-Associated	Host-Associated	41.18%
Engineered	Engineered	1.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.88%
Plants	Host-Associated → Plants	41.18%
Wastewater	Engineered → Wastewater	1.96%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.69%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Cave	Environmental → Terrestrial → Cave	0.98%
Floodplain	Environmental → Terrestrial → Floodplain	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.76%
Loam	Environmental → Terrestrial → Soil → Loam	9.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.92%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.94%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	10.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009690	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG	Engineered	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1016879762	3300004114	Soil	APYFRAGQADTLEEAFGLGTDPNFLPAAVLHWQAGTGGAANILDSDPTAVTDLIAFLRTIDDTTTPFPAADLAPTDPVFADSAALCECQVPVDPMFDCR*
Ga0062589_1020561591	3300004156	Soil	TLEEVFGIGTDPNFLSAAQAHWRAGTGGLPNVLDADQSAVTDLISFLRTIDDGTEPFPAADLAPNDPVFADAAALCDCQKDPPLGTPALDCTP*
Ga0063356_1033942742	3300004463	Arabidopsis Thaliana Rhizosphere	GAAATLEEAFGINTDPNFLPAVQAHWRAGTGGDPNILDSEPTAVTDLIAFLRTIDDRTPPFPAADLAPDDPAFVDFDKVCDCALDTPPMGITDCAP*
Ga0062594_1019811402	3300005093	Soil	NFLAAVQAHWRAGTGGAANVLDSDASAVTDLIAFLRTIDESTPPFPAADLAPDDAAFADATALCDCQKDPPLGTPALDCTP*
Ga0065707_103125961	3300005295	Switchgrass Rhizosphere	SAPYFRAGAAATLEEAFGIGTDPNFLPAVQAHWRAGTGGDPNILDNEPTAVTDLIAFLRTIDDRTPPFPAADLAPDDPAFVDFDKLCDCAQDPPPAGVTDCAP*
Ga0070676_104924812	3300005328	Miscanthus Rhizosphere	LEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILDTDPDATTDLIAFLKTIDDGTPPFPAADLAPDDPVFADADALCDCQLAVPLGTPALDCKP*
Ga0066388_1016620621	3300005332	Tropical Forest Soil	GGDGFNTPSLLGVGDGAPYFRTGAAATLEEAFGIGTDPNFLPAAQAHWRAGTGGDPNILDSDPSAVTDVISFLRTIDDSTPPFPAADLAPDDPTFADAGALCDCEKDPPAGTPALDCRP*
Ga0066388_1028739471	3300005332	Tropical Forest Soil	TGGNPNIIDTDATAVTDLVAFLRTIDDRTTPFPAADLAPDDPVFVDADALCDCQQDPLVGTLDCAP*
Ga0070668_1008353312	3300005347	Switchgrass Rhizosphere	LGIFDSAPYFRHGEAQTLEEVFGIGTDPNFLSAAQAHWRAGTGGVSNVLDADQSAVTDLISFLRTIDDGTEPFPAADLAPNDPVFADAAALCDCQKDPPLGTPALDCTP*
Ga0070668_1020516962	3300005347	Switchgrass Rhizosphere	IFDSAPYFRHGEAQSLEEAFGLGTDPNFLPAAVLHWQAGTGGAANILDSDPTAVTDLIAFLRTIDDTTTPFPAADLAPTDPVFADSAALCECQVPVDPMFDCR*
Ga0070669_1011429322	3300005353	Switchgrass Rhizosphere	HWRAGTGGVANVLDSDASAVADLIAFLRTIDESTPPFPAADLAPDDAAFADATALCDCQKDPPLGTPALDCTP*
Ga0070671_1006871051	3300005355	Switchgrass Rhizosphere	PSLIGVFDSAPYFYTGQAATLEEAFGIGTDPNFLPAAVAHWQAGTGGAANILDSDPTAVTDLIAFLRTIDDTTTPFPAADLAPTDPVFADSAALCDCQVPVDPMFDCR*
Ga0070674_1002996221	3300005356	Miscanthus Rhizosphere	APSLIGVFDSAPYFRSGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILDTDPDAITDLIAFLKTIDDGTPPFPAADLAADDPVFADADALCDCQLAVPLGTPALDCKP*
Ga0008090_100499002	3300005363	Tropical Rainforest Soil	LGKGRSLTARTGAVALDTDPSAVTDLISFLRTIDDSTPPFPAADLAPDDPAFVDAGALCDCQKDPPVGTPALDCRP*
Ga0070694_1018700561	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GIGTPQNLLPFVRAHWRAGTGGAANILESDASAVTDLISFLRTIDESTPPFPAADLAPDDPVFADAAALCDCQKEPAVGTPAIDCAP*
Ga0070681_117732282	3300005458	Corn Rhizosphere	PAVFAAMEAHWRAGTGGDPNILDTDPDAITDLIAFVKTIDDATSPFPAADLAPDDPVFADAGALCDCQLDVPLGTPALDCRP*
Ga0070706_1020041271	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IGVFDSAPYFRTGQADTLEEAFGIGTDPNFLPAAVLHWQAGTGGAANILDSDATAVTDLIAFLRTIDDTTTPFPAADLAPNDPVFVDSAALCDCAQTPPVDPMFDCAP*
Ga0068853_1019194081	3300005539	Corn Rhizosphere	PALAVNAAFGGDGFNAPSLIGVFDSAPYFRSGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILDTDPDAITDLIAFLKTIDDGTPPFPAADLAPDDPVFADADALCDCQLAVPLGTPALDCKP*
Ga0070704_1004262871	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	TDPNFLAAAQAHWRAGTSGMANHLDSDPTAVTDLIAFLRTIDDNTPAFPAVDLAPNDATFADASALCDCQKNPPLGTPALDCTP*
Ga0070704_1022342531	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AQTLEEVFGIGTDPNFLSAAQAHWRAGTGGVSNVLDADQSAVTDLISFLRTIDDGTEPFPAADLAPNDPVFADAAALCDCQKDPPLGTPALDCTP*
Ga0066905_1003295631	3300005713	Tropical Forest Soil	AFGIGTDPNFLAAARAHWRAGTGGAANILDSDPSAVADLISFLRTIDDRTPPFPAADLAPNDPTFADAGALCDCQKDPPLGNPVLDCSP*
Ga0068861_1009309462	3300005719	Switchgrass Rhizosphere	GADGFNTPTLLGIFDSAPYFRAGQAATLEAAFGIGTDPNFLPAAQAHWRAGTGGAANILDSDATAVTDLIAFLRTIDDNTPTFPAADLAPDDPVFADAAALCDCEKDPPLGTPALDCRP*
Ga0068861_1016800382	3300005719	Switchgrass Rhizosphere	TLEEAFGIGTDPNFLAAAQAHWRAGTSGTANVLDSDPTAVTDLIAFLRTIDDNTPAFPAVDLAPNAATFADARALCDCQKNPPLGTPALDCTP*
Ga0066903_1014990213	3300005764	Tropical Forest Soil	SVFPAMEAHWRAGTGGDPNVLDTDPDAVTDLIAFLKTIDDGTPPFPAADLAPDDPVFADAGALCDCQQTPPVGNPALDCRVP*
Ga0068860_1015776382	3300005843	Switchgrass Rhizosphere	TPSLIGVFDSAPYFRTGQADTLEEAFGIGTDPNFLPAAVLHWQAGTGGAANILDSDATAVTDLIAFLRTIDDTTPPFPAADLAPDDPVFADADALCDCQLAVPLGTPALDCKP*
Ga0068860_1022625582	3300005843	Switchgrass Rhizosphere	DSAPYFRNGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDSNILDTDPDAVTDLIAFVKTIDDGTPPFPAADLAPDDPTFADAGALCDCQLDVPLGTPALDCRP*
Ga0068862_1002482821	3300005844	Switchgrass Rhizosphere	GTGGVANVLDSDASAVADLIAFLRTIDESTPPFPAADLAPDDAAFADATALCDCQKDPPLGTPALDCTP*
Ga0070712_1015758962	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	PNFLAAAQAHWRAGTGGAPNVLDSDPSAVTDVISFLRTIDDNTPAFPAADLAPDDPTFADAGALCDCEKDPPLGTPALDCRIVP*
Ga0068871_1019103051	3300006358	Miscanthus Rhizosphere	VQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILDTDPDAITDLIAFLKTIDDGTPPFPAADLAADDPVFADADALCDCQLAVPLGTPALDCKP*
Ga0075428_1008827801	3300006844	Populus Rhizosphere	TPTLLGIFDSAPYFRHGEARSLREVFGIGTDPNFLPAVRAHWRSGTGGAPNILDSDPTAVTALISFLRTIDDRTEPFPAADLAPNDPAFVDAAALCDCQQDPPLGTPTLDCAP*
Ga0075428_1018041241	3300006844	Populus Rhizosphere	AVVHWQAGTGGVANILDSDATAVTDLIAFLRTIDDTTTPFPAADLAPNDPVFGDSTALCDCAQTPPVDPMFDCAP*
Ga0075433_112058613	3300006852	Populus Rhizosphere	FNTPSLIGVFDSAPYFYTGQAATLEEAFGIGTDPNFLPAAVLHWQAGTGGAANILDSDPTAVTDLIAFLRTIDDTTTPFPAADLAPTDPVFADSAALCECQVPVDPMFDCR*
Ga0075433_113422722	3300006852	Populus Rhizosphere	EEAFGIGTDPTVFAAMEAHWRAGTGGDPNILDTDPDAVTDLVAFLKTIDDSTEPFPAADLAPDDPVFADAAALCDCQLDVPLGTPALDCRP*
Ga0075420_1019055783	3300006853	Populus Rhizosphere	EAHWRAGTGGDANILDTDPDAVTDLIAFLKTIDDSTSPFPAADLAPDDPTFADADALCDCQLDVPLGTPALDCRP*
Ga0079219_122206131	3300006954	Agricultural Soil	TNPDFLPAAEAHWRAGTSGNPNVLDANATAVTDLIAFLRTIDDTTTPFPAADLAPNDPTFADAAALCDCQKTPPIGVPALDCAP*
Ga0075435_1004635883	3300007076	Populus Rhizosphere	GDPNILDTDPDAVTDLVAFLKTIDDSTEPFPAADLAPDDPVFADAAALCDCQLDVPLGTPALDCRP*
Ga0075418_124188582	3300009100	Populus Rhizosphere	MRDTFVSTTEDILDTDPDAVTDLIAFLKTIDDGTPPFPAADLAPDDPVFADAAALCDCQLDVPLGTPALDCRP*
Ga0111538_107429781	3300009156	Populus Rhizosphere	EAFGINTDPNFLPAVQAHWRAGTGGDPNILDSEPTAVTDLIAFLRTIDDRTPPFPAADLPPDDPAFVDFDKVCDCALDTPPMGITDCAP*
Ga0105104_106678741	3300009168	Freshwater Sediment	MRAVASSLIAAAGGSIATDPNFLAAARAHWRAGTSGAPNVLDSDPTAVTDLISFLRTIDDNTAPFPAADLTPNDPVFVDAAALYDCQKDPPLGTPALDWSQ*
Ga0116143_106052522	3300009690	Anaerobic Digestor Sludge	QAHYRAGTGGANNILDTDPSARVDLAAFLKSIDETTPPFPAANLAPNDPTFADAAALCDCEKDPPVGNPLLDCRP*
Ga0126380_107245022	3300010043	Tropical Forest Soil	AAQAHWRAGTGGNPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLAPHDPTFVDAGALCDCQKDPPVGTPALDCRP*
Ga0126380_113740561	3300010043	Tropical Forest Soil	QAHWRAGTGGDSNILDTDPTAVTDLIAFVRTIDASTPPFPAADRAPNDPVFADADALCDCQKDPPLGNPALSCKP*
Ga0126380_114380751	3300010043	Tropical Forest Soil	LEEAFGIGTDPNFLPAVQAHWRAGTGGAANILDNDANAVTDLIAFLKTIDGNTPSFPAADLAPDDAVFADAAALCDCQKDPPLGMPALDCRP*
Ga0126384_106958831	3300010046	Tropical Forest Soil	NGAAQTLEEAFGIGTDPNFLPAAQAHWRAGTGGAANILDNDPTAVTDLVAFLRTIDDRTPPFPAADLAPNDPTFVDAAALCDCQQTPPLGSPALDCTP*
Ga0126384_118820351	3300010046	Tropical Forest Soil	TPSLLGVFDSAPYFHNGAAATLEQAFGIGTDPNFLPAAQAHWRAGTGGDQNILDSDPSAVTDVISFLRTIDDNTPPFPAADLAPNDPTFADAGALCDCEKDPPLGTPALSCRP*
Ga0126382_102485261	3300010047	Tropical Forest Soil	NTPTLLGIFDSGPYFRHGEAQTLEEAFGIGTDPNFLAAVQKHWRSGTGGAANVLDTDPTAVTDLISFLRTIDDGTPPFPAADLAPNDPTFADAAAVCDCQKDPLPAGTLDCTP*
Ga0116237_114233622	3300010356	Anaerobic Digestor Sludge	IGPDASIAAAVQAHYRAGTGGGTNILDTDPSARVDLAAFLKSIDETTPPFPAANLAPNDPTFADAAALCDCEKDPPVGNPLLDCRP*
Ga0126370_115663771	3300010358	Tropical Forest Soil	AQAHWRSGTGGTANVLDTDASAVTDLIAFVRTIDASTQPFPAADLAPNDPVFADAAALCDCEKDPPVGTPALDCKP*
Ga0126376_100949771	3300010359	Tropical Forest Soil	GAPYFHNGAAQTLEEVFGVGTDPNFLPAAQAHWRAGTGGAANILDTDPSAVTDVISFLRTIDDNTPPFPAADLAPDDPTFADAGALCDCEKDTPVGTPALDCRP*
Ga0126376_132219611	3300010359	Tropical Forest Soil	AVQAHWRAGTGGASNILDSDASAKTDLIAFLKTIDASTPTFPAADLAPDDPVFADAAALCDCEKDPPVGMPPLDCRP*
Ga0126378_115374683	3300010361	Tropical Forest Soil	GGASNILDSDASAKTDLIAFLKTIDASTPTFPAADLAPDDPVFADAAALCDCEKDPPVGMPPLDCRP*
Ga0126378_115539162	3300010361	Tropical Forest Soil	AGTGGNPNVLDTDPSAVTDLISFLRTIDDSAPPFPAADLAPDDSTFVDAGALCDCQKNPPVGTPALDCRP*
Ga0126378_128374232	3300010361	Tropical Forest Soil	PNVLPAAQAHWRAGTGGAANIFDSDPSAVTDVISFLRTIDDNTPPFPAADLAPDDPTFADAGALCDCEKDTPVGTPALDCRP*
Ga0126377_123460941	3300010362	Tropical Forest Soil	DPNFLAAARAHWRAGTGGAANILDSDPSAVADLISFLRTIDDRTPPFPAADLAPNDPTFADAGALCDCQKDPPLGSPVLDCSP*
Ga0126379_107432242	3300010366	Tropical Forest Soil	TLEEAFGIGTDPNFLPAAQAHWRAGTGGNPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLAPDDPSFVDAGALCDCQKDPPVGTPALDCRP*
Ga0134124_112473991	3300010397	Terrestrial Soil	AHWRAGTGGANNVLDTDASAVTDLIAFVKTIDDNTPIFPAADLAPDNPVFADAAALCDCEKDPPLGTPALDCRP*
Ga0134124_125019032	3300010397	Terrestrial Soil	EEAFGIGTDPNFLAAARAHWRAGTGGNPNILDTDPSAVTDVISFLRTIDDSTPPFPAADLAPDDPTFADAGALCDCQKVPPLGTPAISCLP*
Ga0134122_107251672	3300010400	Terrestrial Soil	GAAATLEEAFGIGTDPNFLPAVQAHWRAGTGGVANILDSQPTAVTDLIAFLRTIDDRTPPFPAADLAPDDPTFADFAALCDCAKTPPLGTPALDCAP*
Ga0157296_104173491	3300012905	Soil	NTVPPALAVNAAFGGDGFNAPSLIGVFDSAPYFRSGAVQTLEEAFGIGTDPAVFAAMEAHWRAGTGGDSNILDTDPDAVTDLIAFLKTIDDSTPPFPAADLAPDDPVFADAATLCDCQLDVPLGTPALDCRP*
Ga0126369_136696601	3300012971	Tropical Forest Soil	VQAHWRAGTSGNPNILDSDPSAVTDLIAFVRTIDDRTPPFPAADLAPDDITFADAGALCDCQQTPPVGNPALDCRVP*
Ga0163162_104004251	3300013306	Switchgrass Rhizosphere	LGIFDDAPYFRAGQAKTLEEAFGIGTDPNFLAAAQAHWRAGTSGTANVLDSDPTAVTDLIAFLRTIDDNTPAFPAVDLAPNDATFADASALCDCQKNPPLGTPALDCTP*
Ga0157375_136332701	3300013308	Miscanthus Rhizosphere	PTLLGVFDSAPYFHNGSVPTLEHLFCVGTDASVLAAVQAHWRAGTGGANNVLDTDASAVTDLIAFVKTIDDNTPIFPAADLAPDNPVFADAAALCDCEKDPPLGTPALDCRP*
Ga0157377_108764341	3300014745	Miscanthus Rhizosphere	RAGTGGDPNILDSEPTAVTDLIAFLRTIDDRTPPFPAADLAPDDPAFVDFDKVCDCALDTPPMGITDCAP*
Ga0157379_119084431	3300014968	Switchgrass Rhizosphere	AAVQALWRSGTGGANNVLDTDASAVTDLIAFVKTIDDNTPIFPAADLAPDNPVFADAAALCDCEKDPPLGTPALDCRP*
Ga0157376_115908681	3300014969	Miscanthus Rhizosphere	AVNAAFGGDGFNAPSLIGVFDSAPYFRSGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILDTDPDAITDLIAFLKTIDDSTPPFPAADLAPDDPIFADAAALCDCQLAVPLGTPALDCKP*
Ga0132255_1011292072	3300015374	Arabidopsis Rhizosphere	LVAAAFGGDGFNAPSLLGVGDGAPYFRNGAAQTLEEAFGIGTDPNFLPAAQAHWRAGTGGDPNILDTDPSAVTDVISFLRTIDDNTPAFPAADLAPDDPTFADAAALCDCEKDTPLGTPALDCRP*
Ga0182033_119208081	3300016319	Soil	AHWRAGTGGAANVLDSDPSAVTDLIAFVRTIDATTPPFPAADLAPNDPVFADAAALCDCEKDPPLGTPALDCTP
Ga0182037_102314442	3300016404	Soil	GVGTDPAVLPAAQAHWRAGTGGAANVLDSDPSAVTDLIAFVRTIDATTPPFPAADLAPNDPVFADAAALCDCEKDPPLGTPALDCTP
Ga0173481_106911101	3300019356	Soil	NTPSLIGVFDSAPYFRAGQADTLEEAFGLGTDPNFLPAAVLHWQAGTGGAANILDSDPTAVTDLIAFLRTIDDTTTPFPAADLAPTDPVFADSAALCECQVPVDPMFDCR
Ga0187894_102060622	3300019360	Microbial Mat On Rocks	ATQAHWRAGTSGAMNILDSDPSAVTDLIAFLRTIDDNTTPFPAADLAPNDATFADAAALCDCQKDPPLGTPALDCTP
Ga0207681_104980211	3300025923	Switchgrass Rhizosphere	SPSNTVALALDVNAAFGGDGFNAPSLIGVFDSAPYFRSGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILDTDPDAITDLIAFLKTIDDGTPPFPAADLAPDDPVFADADALCDCQLAVPLGTPALDCKP
Ga0207644_112474102	3300025931	Switchgrass Rhizosphere	GAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDSNILDTDPDAVTDLIAFVKTIDDGTPPFPAADLAPDDPTFADADALCDCQLAVPLGTPALDCKP
Ga0207669_104725561	3300025937	Miscanthus Rhizosphere	GFNAPSLIGVFDSAPYFRSGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILDTDPDAITDLIAFLKTIDDGTPPFPAADLAADDPVFADADALCDCQLAVPLGTPALDCKP
Ga0207679_117268331	3300025945	Corn Rhizosphere	FGGDGFNAPSLLGVFDSGPYFRTGAAATLEEAFGIGTNPNFLAAVQAHWRAGTGGAANVLDSDASAVTDLIAFLRTIDESTPPFPAADLAPDDAAFADATALCDCQKDPPLGTPALDCTP
Ga0207651_103113841	3300025960	Switchgrass Rhizosphere	WRAGTGGNSNILDSDASAARDLVAFVKTIDERTNAFPAADLAPNDPTFADAAALCDCAKDPPLGTPAIDCRP
Ga0207668_107703251	3300025972	Switchgrass Rhizosphere	NFLSAAVLHWQAGTGGAANILDSDATAVTDLIAFLRTIDDTTTPFPAADLAPNDPVFVDSAALCDCAQTPPVDPMFDCAP
Ga0207639_112577591	3300026041	Corn Rhizosphere	PALAVNAAFGGDGFNAPSLIGVFDSAPYFRSGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILDTDPDAITDLIAFLKTIDDGTPPFPAADLAPDDPVFADADALCDCQLAVPLGTPALDCKP
Ga0207641_109137822	3300026088	Switchgrass Rhizosphere	GGNSNILDSDASAARDLVAFVKTIDERTNAFPAADLAPNDPTFADAAALCDCAKDPPLGTPAIDCRP
Ga0207641_122517422	3300026088	Switchgrass Rhizosphere	EAFGIGTNPNFLAAVQAHWRAGTGGVANVLDSDASAVADLIAFLRTIDESTPPFPAADLAPDDAAFADATALCDCQKDPPLGTPALDCTP
Ga0207641_123625872	3300026088	Switchgrass Rhizosphere	TDPNVLPAAQAHWRAGTGGDPNILDTDPSAVTDVISFLRTIDDSTPPFPAADLAPDDPTFADAGALCDCQKVPPLGTPAISCLP
Ga0207675_1008371611	3300026118	Switchgrass Rhizosphere	PSLIGVFDSAPYFRAGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDPNILNTDPDAITDLIAFLKTIDDGTPPFPAADLAPDDPTFADADALCDCQLAVPLGAPALDCKP
Ga0268265_108597121	3300028380	Switchgrass Rhizosphere	AVAHWQAGTGGVANILDSDATAVTDLIAFLRTIDDTTTPFPAADLAPNDPVFGDSAALCDCAQTPPVDPLFDCAP
Ga0268264_119856512	3300028381	Switchgrass Rhizosphere	FDSAPYFRNGAVQTLEEAFGIGTDPSVFAAMEAHWRAGTGGDSNILDTDPDAVTDLIAFVKTIDDGTPPFPAADLAPDDPTFADAGALCDCQLDVPLGTPALDCRP
Ga0247825_107402961	3300028812	Soil	VGQAATLEEAFGIGTDPNFLPAAVVHWQAGTGGVANILDSDATAVTDLIAFLRTIDDTTTPFPAADLAPNDPVFGDSAALCDCAQTPPVDPMFDCAP
Ga0247825_113455311	3300028812	Soil	PINTVQPALAVNAAFGGEGFSAPSLLGAFDTAPYFHNGSVPTLDALLGIGTDPAVLAAVQAHWRAGTGGNANILDNDQTARTDLVAFVRIIDETTAAFPAANLAPDDPTFGDAAALCDCAKEPPLGTPAIDCRP
Ga0307408_1016675441	3300031548	Rhizosphere	IGTDAAVFAAMEAHWRAGTGGDPNILDTDLDAITDLIAFVKTIDDATAPFPAADLAPDDPVFADAATLCDCQLDVPLGTPALDCRP
Ga0318561_101715071	3300031679	Soil	HHGAAQTLEEAFGIGTDPNFLPAAQAHWRAGTGGNPNILDTDPSAVTDLISFLRTIDDSTPPFPAADLASDNPTFVDAGALCDCEKDPPVGTPALDCRP
Ga0310813_123571501	3300031716	Soil	EEAFGIGTDPNFLPAAVAHWQAGTGGAANILDSDPTAVTDLIAFLKTIDDTTTPFPAADLAPNDPVFADSAALCDCQVPVDPMFDCR
Ga0318493_108197962	3300031723	Soil	FNTPSLLGVGDGAPYFRNGAAQTLEEAFGIGTDPNFLPAAQAHWRAGTGGNPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLAPDDPTFADAGALCDCEKDPPLGTPALDCRP
Ga0318501_102451922	3300031736	Soil	EAFGIGTDPNFLPAAQAHWRAGTGGNPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLAPDDPTFVDAGALCDCEKDPPVGTPALDCRP
Ga0307468_1022182502	3300031740	Hardwood Forest Soil	WRAGTGGAANVLDSQPTAVTNLIAFLRTIDDTTPAFPAADLAPDDPTFADAAALCDCQKEPPLGTPVLDCSP
Ga0318548_105221782	3300031793	Soil	GTDPNFLPAAQAHWRAGTGGNPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLAPDDPTFVDAGALCDCEKDPPVGTPALDCRP
Ga0306923_101178061	3300031910	Soil	FLPAAQAHWRAGTGGNPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLAPDDPTFADAGALCDCEKDPPLGTPALDCRP
Ga0310884_108597991	3300031944	Soil	PNFLPAAVVHWQAGTGGVANILDSDATAVTDLIAFLRTIDDTTTPFPAADLAPNDPVFGDSAALCDCAQTPPVDPMFDCAP
Ga0310910_110885502	3300031946	Soil	PYFRNGAAQTLEEAFGIGTDPNFLPAAQAHWRAGTGGSPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLAPDDPTFADAGALCDCEKDPPLGTPALDCRP
Ga0307471_1022378422	3300032180	Hardwood Forest Soil	DSAPYIRTGQADTLEEAFGIGTDPNFLPAAVLHWQAGTGGAANILDSDATAVTDLIAFLRTIDDTTTPFPAADLAPNDPVFVDSAALCDCAQTPPVDPMFDCAP
Ga0306920_1011045352	3300032261	Soil	LGVGDGAPYFRNGAAQTLEEAFGIGTDPNFLPAAQAHWRAGTGGNPNVLDTDPSAVTDLISFLRTIDDSTPPFPAADLASDNPTFVDAGALCDCEKDPPVGTPALDCRP
Ga0335085_125844271	3300032770	Soil	AGTGGMSNILDTDATAVTDLIAFVRTIDQTTTPFPAADLAPNDPVFGDAAALCDCQKDPPAGNPAIACTPSM
Ga0335082_113946441	3300032782	Soil	HWRSGTGGAANILDSDASAVTDLIAFVRTIDASTPPFPAADLSPNDPVFSDAAALCDCEKDPPVGTPALDCIP
Ga0335080_109638542	3300032828	Soil	LRSNGLSPVNTNTPTLTVAAAFGADGFNTPSLLGVFESAPYFHHGAAQTLEQVFGVGTDSIFLAAAQAHWRAGTGGAQNILDTDPTAVTDLVAFVSTIDERTQPFPAADLAPNDPVFADASAVCDCQKDPPLGTPALKCTP
Ga0335084_122242051	3300033004	Soil	PYFHDGAAANLEQAFGEGTNPNFLPAAQAHWRAGTGGAPNILDSDATAVADLIAFVKTIDAATAIFPASNLAPTDSAFADAAALCDCEKTPPLGTPALDCTP
Ga0364934_0252100_2_292	3300034178	Sediment	GAADTLEEAFGIGTDPNFLPAVQAHWRAGTGGVVNILDSDATAVTDLIAFLRTIDDRTTPFPAADLAPNDPIFADAGALCDCQLAVPIGTPPLDCN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101606

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences