Metagenome Family F101581

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101581
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	99 residues
Representative Sequence	MPGKLDEISRTIGAIETAIGELRRRADEDREIRDRWHAENRAAIATLTHKLDQHAAAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEAVVKWASGRILEHFQ
Number of Associated Samples	66
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	48.04 %
% of genes near scaffold ends (potentially truncated)	47.06 %
% of genes from short scaffolds (< 2000 bps)	84.31 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.922 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (39.216 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.863 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 76.64% β-sheet: 0.00% Coil/Unstructured: 23.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF14067	LssY_C	15.69
PF01124	MAPEG	4.90
PF04972	BON	3.92
PF07750	GcrA	3.92
PF00990	GGDEF	3.92
PF07043	DUF1328	1.96
PF00106	adh_short	0.98
PF01548	DEDD_Tnp_IS110	0.98
PF03330	DPBB_1	0.98
PF13539	Peptidase_M15_4	0.98
PF06314	ADC	0.98
PF03460	NIR_SIR_ferr	0.98
PF13403	Hint_2	0.98
PF09374	PG_binding_3	0.98
PF04060	FeS	0.98
PF00067	p450	0.98
PF01408	GFO_IDH_MocA	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG5352	Uncharacterized conserved protein	Function unknown [S]	3.92
COG5487	Uncharacterized membrane protein YtjA, UPF0391 family	Function unknown [S]	1.96
COG2124	Cytochrome P450	Defense mechanisms [V]	0.98
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.98
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
All Organisms	root	All Organisms	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
cellular organisms	root	All Organisms → cellular organisms	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.94 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.94 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.94 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.98 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.98 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.94 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.94 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.98 %
Phyllobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium	0.98 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.94 %
Methylocystis bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	0.98 %
Phyllobacterium endophyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium endophyticum	0.98 %
Desulfosporosinus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfosporosinus	0.98 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.94 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.98 %
Methylocystis bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	0.98 %
Phyllobacterium endophyticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium endophyticum	0.98 %
Desulfosporosinus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfosporosinus	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10005839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10607	Open in IMG/M
3300004092\|Ga0062389_101930244	Not Available	768	Open in IMG/M
3300004635\|Ga0062388_102463653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300004643\|Ga0062591_100485386	Not Available	1055	Open in IMG/M
3300005093\|Ga0062594_101610905	Not Available	673	Open in IMG/M
3300005456\|Ga0070678_100108400	All Organisms → cellular organisms → Bacteria → Proteobacteria	2168	Open in IMG/M
3300005591\|Ga0070761_10549369	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005591\|Ga0070761_10922136	Not Available	553	Open in IMG/M
3300005607\|Ga0070740_10152308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	999	Open in IMG/M
3300005617\|Ga0068859_101258011	Not Available	815	Open in IMG/M
3300005921\|Ga0070766_10189264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1281	Open in IMG/M
3300006176\|Ga0070765_100102629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2475	Open in IMG/M
3300007076\|Ga0075435_101564024	Not Available	578	Open in IMG/M
3300009547\|Ga0116136_1173070	Not Available	543	Open in IMG/M
3300009632\|Ga0116102_1064534	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300010379\|Ga0136449_100237323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3406	Open in IMG/M
3300010399\|Ga0134127_11486068	Not Available	750	Open in IMG/M
3300011418\|Ga0153954_1035286	Not Available	1300	Open in IMG/M
3300013308\|Ga0157375_11558583	Not Available	780	Open in IMG/M
3300014169\|Ga0181531_10603716	Not Available	680	Open in IMG/M
3300014201\|Ga0181537_10230192	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300014325\|Ga0163163_12833719	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300014654\|Ga0181525_10812447	Not Available	528	Open in IMG/M
3300014657\|Ga0181522_10536910	Not Available	706	Open in IMG/M
3300014838\|Ga0182030_10277596	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300017924\|Ga0187820_1147885	Not Available	706	Open in IMG/M
3300017925\|Ga0187856_1000959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	24113	Open in IMG/M
3300017955\|Ga0187817_10364917	Not Available	921	Open in IMG/M
3300017970\|Ga0187783_10324932	Not Available	1121	Open in IMG/M
3300017970\|Ga0187783_10412870	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300017970\|Ga0187783_11415082	Not Available	501	Open in IMG/M
3300017972\|Ga0187781_10258198	Not Available	1234	Open in IMG/M
3300017972\|Ga0187781_10581139	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300017972\|Ga0187781_10629047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	774	Open in IMG/M
3300017972\|Ga0187781_10654805	All Organisms → cellular organisms → Bacteria → Proteobacteria	758	Open in IMG/M
3300017972\|Ga0187781_10853769	Not Available	662	Open in IMG/M
3300017975\|Ga0187782_10008804	All Organisms → cellular organisms → Bacteria	7457	Open in IMG/M
3300017975\|Ga0187782_10014891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5670	Open in IMG/M
3300017975\|Ga0187782_10157667	Not Available	1690	Open in IMG/M
3300017975\|Ga0187782_10630042	Not Available	825	Open in IMG/M
3300017975\|Ga0187782_10704549	Not Available	778	Open in IMG/M
3300018003\|Ga0187876_1169975	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300018007\|Ga0187805_10327520	Not Available	706	Open in IMG/M
3300018020\|Ga0187861_10397752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfosporosinus	577	Open in IMG/M
3300018026\|Ga0187857_10537097	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300018047\|Ga0187859_10645693	Not Available	599	Open in IMG/M
3300018062\|Ga0187784_10050210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3375	Open in IMG/M
3300018062\|Ga0187784_10149530	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300018062\|Ga0187784_10250513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1441	Open in IMG/M
3300018062\|Ga0187784_10328616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1240	Open in IMG/M
3300018062\|Ga0187784_10985387	Not Available	670	Open in IMG/M
3300018062\|Ga0187784_11228016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Phyllobacterium → Phyllobacterium endophyticum	594	Open in IMG/M
3300018064\|Ga0187773_10336887	Not Available	854	Open in IMG/M
3300018085\|Ga0187772_11080921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300018085\|Ga0187772_11429742	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300018085\|Ga0187772_11439592	Not Available	512	Open in IMG/M
3300018086\|Ga0187769_10593311	Not Available	837	Open in IMG/M
3300018088\|Ga0187771_10320408	Not Available	1300	Open in IMG/M
3300018088\|Ga0187771_10423143	Not Available	1124	Open in IMG/M
3300018090\|Ga0187770_10188002	Not Available	1588	Open in IMG/M
3300018090\|Ga0187770_10739389	Not Available	786	Open in IMG/M
3300018090\|Ga0187770_11326222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	584	Open in IMG/M
3300021181\|Ga0210388_10421746	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300021406\|Ga0210386_10638750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300025914\|Ga0207671_10716856	Not Available	795	Open in IMG/M
3300025916\|Ga0207663_10012621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4574	Open in IMG/M
3300025933\|Ga0207706_10282257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1448	Open in IMG/M
3300026121\|Ga0207683_10320211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1420	Open in IMG/M
3300027590\|Ga0209116_1069249	Not Available	769	Open in IMG/M
3300027895\|Ga0209624_10054526	Not Available	2562	Open in IMG/M
3300027908\|Ga0209006_10045257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3961	Open in IMG/M
3300028789\|Ga0302232_10491011	Not Available	604	Open in IMG/M
3300029910\|Ga0311369_10048778	All Organisms → cellular organisms → Bacteria	4637	Open in IMG/M
3300030007\|Ga0311338_10112046	All Organisms → cellular organisms → Bacteria → Proteobacteria	3355	Open in IMG/M
3300030007\|Ga0311338_11583142	Not Available	600	Open in IMG/M
3300030042\|Ga0302300_1201413	Not Available	556	Open in IMG/M
3300030399\|Ga0311353_10213305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1807	Open in IMG/M
3300030503\|Ga0311370_11632683	Not Available	665	Open in IMG/M
3300030618\|Ga0311354_10316925	Not Available	1605	Open in IMG/M
3300031233\|Ga0302307_10483357	Not Available	627	Open in IMG/M
3300031671\|Ga0307372_10526100	Not Available	553	Open in IMG/M
3300031708\|Ga0310686_101278321	Not Available	822	Open in IMG/M
3300031708\|Ga0310686_103360731	Not Available	840	Open in IMG/M
3300031708\|Ga0310686_104234965	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300031708\|Ga0310686_105857117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7039	Open in IMG/M
3300031708\|Ga0310686_111908640	Not Available	549	Open in IMG/M
3300031708\|Ga0310686_116369732	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300032160\|Ga0311301_11530318	Not Available	819	Open in IMG/M
3300032783\|Ga0335079_10665671	Not Available	1091	Open in IMG/M
3300032783\|Ga0335079_11499444	Not Available	666	Open in IMG/M
3300032783\|Ga0335079_11873754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300032805\|Ga0335078_10012551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12570	Open in IMG/M
3300032805\|Ga0335078_10269051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2312	Open in IMG/M
3300032805\|Ga0335078_10503607	All Organisms → cellular organisms → Bacteria → Proteobacteria	1555	Open in IMG/M
3300032805\|Ga0335078_10783260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1166	Open in IMG/M
3300032805\|Ga0335078_10832135	Not Available	1120	Open in IMG/M
3300032805\|Ga0335078_12290915	Not Available	566	Open in IMG/M
3300032892\|Ga0335081_12065687	Not Available	605	Open in IMG/M
3300032896\|Ga0335075_11142988	Not Available	682	Open in IMG/M
3300032896\|Ga0335075_11343825	Not Available	607	Open in IMG/M
3300032896\|Ga0335075_11479994	Not Available	567	Open in IMG/M
3300032955\|Ga0335076_11643924	Not Available	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.18%
Host-Associated	Host-Associated	8.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.49%
Aquatic	Environmental → Aquatic	15.69%
Plants	Host-Associated → Plants	7.84%
Fungi	Host-Associated → Fungi	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Freshwater	Environmental → Aquatic → Freshwater	15.69%
Peat	Environmental → Terrestrial → Peat	8.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.94%
Roots	Host-Associated → Plants → Roots	0.98%
Mycelium	Host-Associated → Fungi → Mycelium	0.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	43.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.73%
Loam	Environmental → Terrestrial → Soil → Loam	8.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.96%
Clay	Environmental → Terrestrial → Soil → Clay	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	42.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	28.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	13.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100058395	3300001593	Forest Soil	MPGKLDEISRTIGAVETAIGELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGIVVFGWIVEALVKWAAGRILERFQ*
Ga0062389_1019302441	3300004092	Bog Forest Soil	MSELRRRADEDRETRDRWHTENRAAITALSRKLDQHAAAMEVLRPTVAALELSRSKLAAWASIGFAGVVVVGWIVEATVKWAIDRAWSQLH*
Ga0062388_1024636531	3300004635	Bog Forest Soil	SVRELRRRADEDREIRDRWHTESRAAIASLKQKLDRHAAAMQVMRPALAALELSRSKLATWASIGFAAVVVFGWIVEASVKFAVSWLWSHLH*
Ga0062591_1004853861	3300004643	Soil	MSDTMAGKLDEISRTIGAIETSVRDLRRRAEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ*
Ga0062594_1016109051	3300005093	Soil	AEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ*
Ga0070678_1001084001	3300005456	Miscanthus Rhizosphere	AWANQQYLPLRDLRRRAEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ*
Ga0070761_105493691	3300005591	Soil	MPGKLDEISRIVGAVETAIRELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAG
Ga0070761_109221362	3300005591	Soil	MPGKLDEISRIVGAVETAIRELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHANAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILEHFQ*
Ga0070740_101523081	3300005607	Surface Soil	IETSVSELRRRAEEDREIRDRWHAEYRAAIAVLTRKLDQHAAAVEMLRPAVAALELSRSRLAAWASIGLAGVVVCGWVVEAAVKWAVTRALSYFQ*
Ga0068859_1012580111	3300005617	Switchgrass Rhizosphere	LRRRAEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ*
Ga0070766_101892641	3300005921	Soil	AMPGKLDEISRIVGAVETAIRELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILEHFQ*
Ga0070765_1001026294	3300006176	Soil	DEDRDIRDRWHAENRAAIATLTQKLDHHADAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILEHFQ*
Ga0075435_1015640242	3300007076	Populus Rhizosphere	RAEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ*
Ga0116136_11730701	3300009547	Peatland	MANKRAETMPGKLDEISRAIGAIETSVRELQRRAEEDRDTRDHWHAESRAAIAALTRKLDQHATALERMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEATVKWAVAWTWSHVQ*
Ga0116102_10645342	3300009632	Peatland	MANKRAQTMPGKLDEISRAIGAIETSVRELQRRAEEDRDTRDHWHAESRAAIAALTRKLDQHATALERMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEATVKWAVAWTWSHVQ*
Ga0136449_1002373231	3300010379	Peatlands Soil	LRRRADEDRETRDRWHAESRAAIAAVTQKLDHHATAVDMMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEATVKFAVTWTWSHFH*
Ga0134127_114860681	3300010399	Terrestrial Soil	QYLPLRDLRRRAEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ*
Ga0153954_10352862	3300011418	Attine Ant Fungus Gardens	LQLRADEDREIRDRWHAENREAIAALTRKLDQHAAAVDMMRPAVAALEVSRSKLAAWASLGFAGLVVLGWIVEASVKWAIEQAWSSLH*
Ga0157375_115585832	3300013308	Miscanthus Rhizosphere	DEISRTIGAIETSVRDLRRRAEEDRKLRDRWHLENRAAFSARAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ*
Ga0181531_106037161	3300014169	Bog	LRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWTAGRILERFQ*
Ga0181537_102301922	3300014201	Bog	MPGKLDEISRIVGAVETAIRELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILEHFQ*
Ga0163163_128337192	3300014325	Switchgrass Rhizosphere	RTIGAIEATVRDLKRRADEDRRLRDRWHTENRAAIAALAQKLDQHADTVAALRPAVAALELSRSKIAALASIGLAGVVVFGWLVEGAVKWLAGWILSHFQ*
Ga0181525_108124471	3300014654	Bog	RRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWTAGRILERFQ*
Ga0181522_105369102	3300014657	Bog	LRRRADEDRDIRDRWHAENRAAIATLTQKLDHHANAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILEHFQ*
Ga0182030_102775962	3300014838	Bog	MAGKLDEISRIIGAIETSVGELRSRAEEDRETRDRWHAENRAAIMTLTQKLDRHAEAVELLRPAVAALELSRSKLAALASIGFAGVAIFGWIVEAAIKWAVTWTLSHFQ*
Ga0187820_11478852	3300017924	Freshwater Sediment	DREIRDRWHAENRAAIATLTHKLDAHAAAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEAVVKWAAGRLLEHFQ
Ga0187856_100095914	3300017925	Peatland	MPGKLDEISRAIGAIETSVRELQRRAEEDRDTRDHWHAESRAAIAALTRKLDQHATALERMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEATVKWAVAWTWSHVQ
Ga0187817_103649171	3300017955	Freshwater Sediment	LPRLELRRRADEDRETRDRWHDESRAAIAALAQKLDKHVAAVELLRPAVAALELSRSKLAAWASIGFASVVVFGWIVEAVVKATVTWAWSHIH
Ga0187783_103249322	3300017970	Tropical Peatland	IETSVRDLRDRADEDRDIRDRWHAESRAAIAALTRKLDQHAAAVETMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEASVKFAVAWIWSHLH
Ga0187783_104128701	3300017970	Tropical Peatland	MPGKLDQISHAIGTIEAAIRELQRRADEDRETRDRWFAESRAAIAALTHKLDQHAAAVEMLRPAVAGLQLSRSKLTAFASIGVAGVIVFGWIVEAVLRAAVAWAWSHLH
Ga0187783_114150821	3300017970	Tropical Peatland	RRADSKMPGKLDQISHAIGAIEGAIRELRRRTDDDRETRDRWFAESRAAIAALTQKLDRHAAAVEMLRPAVAALELSRSKLAAWASIGFAGIVVFGWIVEATVKWAVDRVWSHFQ
Ga0187781_102581983	3300017972	Tropical Peatland	MSGKLDEISRAIGAVETAIQELQRRADEDRETRDRWHAESQAAVAALTKKLDQHAAAVELMRPAVAALELSRSKLATWASLGVAFFVEFGWIAEAII
Ga0187781_105811392	3300017972	Tropical Peatland	QELQRRADEDRETRDRWHTESQAAVAALTKKLDQHAAAVELMRPAVAALELSRSKLATWASLGVAFFVVFGWIAEATIKQIVA
Ga0187781_106290472	3300017972	Tropical Peatland	RRADEDRETRDQWFNESRAAIAALTQKLDQHAAAVEMLRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEAAVKWALARIFSHFH
Ga0187781_106548051	3300017972	Tropical Peatland	RTASTRAQAMPGKLDEISRAIGAIETAIGELQRRADEDRETRDHWFAESRAAIAALTQKLDQHAAAVEMLRPAVAALELSRSKLTAWASVGLAGVVVFGWIVEALVKAVVAWAWSHFH
Ga0187781_108537692	3300017972	Tropical Peatland	MAGKLDEISRAIGAIETSVRDLRRRADEDREIRDRWYAESRAAIAVLTEKLDRHATAVDVMRPAVAALELSRAKLATWASIGFAAIVVCGWIVEASVKWALSWAWSHVH
Ga0187782_100088047	3300017975	Tropical Peatland	MRANAAARRSPPVVRLRQNRKDQRMANKLDQISHTIGAIETSVCELQRRAEEDREIRDRWHAENRAATAQLSQKLDRHAAAVESMRPVVAGLELSRSKLAAWASIGFASVVVFGWIVEAAIKAAVAWTLSHFQ
Ga0187782_100148917	3300017975	Tropical Peatland	MAGKLDEISRAIGAIETSIRHLRRRADEDREIRDRWHAESRAAIAALTEKLDRHAATVEVMRPAVAALELSRSKLAAWASIGFALVVVCGWIVEASVKWALSWAWSHVH
Ga0187782_101576673	3300017975	Tropical Peatland	MPGKLDEISRAIGAIETAIGELRRRADEDRGIRDRWHAENRAAIATLTHKLDQHSGAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEAVVKWAAGRILEHFQ
Ga0187782_106300422	3300017975	Tropical Peatland	MPGKLDEISRVIGAIETSVREIRRRADEDREIRDRWHAENRAAIALLTQKLDRHAAAVEMLRPTVAALELSRSKLVAWASIGFAGVGVFGWIVEATVKFAVARAWSHFQ
Ga0187782_107045492	3300017975	Tropical Peatland	LKRRADEDREIRDRWFTESRAAIAALTKKLDQQAAAVESMRPAVAALELSRSKLATLASVGFIGVIVFGWIVEAAVKFAVSWIVSHFQ
Ga0187876_11699751	3300018003	Peatland	MPGKLDEISRAIGAIETSVRELQRRAEEDRDTRDHWHAESRAAIAALTRKLDQHATALERMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEAT
Ga0187805_103275201	3300018007	Freshwater Sediment	MSGRVDEISRAIGAIETAIHELRRRADEDRETRERWFAESRAAIAALTQKLDRHAAAVDMLRPAVAALELSRSKLATFASIGFAGVVVLGWIVEAALKTAVTWAWSHLH
Ga0187861_103977521	3300018020	Peatland	MPGKLDEISRAIGAIETSVRELQRRAEEDRDTRDHWHAESRAAIAALTRKLDQHATALERMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEATVKWA
Ga0187857_105370972	3300018026	Peatland	ETMPGKLDEISRAIGAIETSVRELQRRAEEDRDTRDHWHAESRAAIAALTRKLDQHATALERMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEATVKWAVAWTWSHVQ
Ga0187859_106456932	3300018047	Peatland	LRRRADEDRDIRDRWHAANRAAIATLTQKLDHHTGAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILERFQ
Ga0187784_100502106	3300018062	Tropical Peatland	MSGKLDEISRAIGAIETAVQELQRRADEDRETRDRWHTESQAAVAALTKKLDQHAAAVELMRPAVAALELSRSKLATWASLGVAFFVVFGWIAEATIKQIVA
Ga0187784_101495303	3300018062	Tropical Peatland	CELQRRAEEDREIRDRWHAENRAATAQLSQKLDQHAAAVESMRPVVAGLELSRSKLAAWASIGFASVVVFGWIVEAAIKAAVAWTLSHFQ
Ga0187784_102505132	3300018062	Tropical Peatland	LKRRADEDREIRDRWFTESRAAIAALTKKLDQQAAAVESMRPAVAALELSRSKLATLASVGFIGVIVFGWIMEAVIKLTVSWIISHFQ
Ga0187784_103286164	3300018062	Tropical Peatland	MAGKLDEISRAIGAIETSILELQRRADEDRDTRDCWYAETRAAIAAMTQKIDQHAAAVEVMRPAVAALELSRSKLAIWASIGFASVVVCGWAVEATVKWAIELTWSHLH
Ga0187784_109853871	3300018062	Tropical Peatland	MSGKLDELSRAIGAVETAIQELQRRADEDRETRDRWHAESQAAVAALTKKLDQHAAAVELMRPAVAALELSRSKLATWASLGVAFFVVFGWIAEAIIKQVVAWAWSHLH
Ga0187784_112280162	3300018062	Tropical Peatland	IETSIRHLRRRADEDREIRDRWYAESRAAIAVLTEKLDRHATAVDVMRPAVAALELSRAKLAAWASIGFAAIVVCGWIVEASVKWALSWAWSHVH
Ga0187773_103368872	3300018064	Tropical Peatland	MATKLDEISRAIGAIETSTRELRRRAEEDREIRDRWHAENRAAIAMLTQKLDQHAAAVEMLRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEAIVKAVAAWAWSHFH
Ga0187772_110809212	3300018085	Tropical Peatland	MAGKLDEISRAIGAIETSILELQRRADEDRDTRDCWYAETRAAIAALTHKIDQHAAAVEVMRPAVAALELSRSKLAIWASIGFASVVVCGWAVEATVKWAIELTWSHLH
Ga0187772_114297422	3300018085	Tropical Peatland	AIRDLEHRADEDREIRDRWHAESRAAIAALTRKLDQHAAAVDLLRPAVAALELSRSKLATLASIGFAGVVVFGWMVEAVVKWALTRAWAHFQ
Ga0187772_114395922	3300018085	Tropical Peatland	RDLRRRAEEDRENRDRWHAENRAAIAALTQKLDQHAAAVATLRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEGAVKWLVAWILSHFH
Ga0187769_105933112	3300018086	Tropical Peatland	MPGKLDQISHAIDTIEAAIRELQHRADEDRETRDRWFAESRAAIAALTQKLDQHAAAVEMLRPAVAGLQLSRSKLTALASIGFAGVIVFGWIVEAILRAAVAWAWSHLH
Ga0187771_103204081	3300018088	Tropical Peatland	MAGKLDEISHAIGAIEAAIRDLQRRADEDRETRDRWHAESRAAIAALTRKLDQHAAAVDAMRPAVASIVVLRSKLAWWGSIGLGVVAVFGWIVEASVKAAVTFIWSHFH
Ga0187771_104231433	3300018088	Tropical Peatland	MAGKLDEISRIIGAIETSIRELKRRADEDREIRDRWFTESRAAIAALTKKLDQHAAAVESMRPAVAALELSRSKLATLASVGLIGVIVFGWIVEAVIKLTVSWIISHFQ
Ga0187770_101880022	3300018090	Tropical Peatland	MAGKLDEISHAIGAIEAAIRDLQRRADEDRETRDRWHAESRAAIAALTRKLDQHAAAVDAMRPAVASIVVLRSKLAWWGFIGLGVVAVFGWIVEASVKAAVTFIWSHFH
Ga0187770_107393892	3300018090	Tropical Peatland	MPGKLDQISHAIGTIEAAIRELQHRADEDRETRDRWFAESRAAIAALTQKLDQHAAAVEMLRPAVAGLQLSRSKLTALASIGFAGVIVFGWIVEAILRAAVAWAWSHLH
Ga0187770_113262221	3300018090	Tropical Peatland	AMAGKLDEISRAIGAIETSIRHLRRRADEDREIRDRWYTESRAAIAVLTEKLDRHATAVEVMRPAVAALELSRAKLATWASIGFAAIVVCGWVVEATVKWAIGLVWSHFH
Ga0210388_104217462	3300021181	Soil	MPGKLDEISRIVGAVETAIRELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHANAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILEHFQ
Ga0210386_106387501	3300021406	Soil	AELQLRADEDREIRDRWHAENREAIAALTRKLDQHAAAVEMMRPAVAALEVSRSKLAAWASLGFAGLVVLGWIVEASVKWAIEQAWSQLH
Ga0207671_107168562	3300025914	Corn Rhizosphere	LRRRAEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ
Ga0207663_100126211	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	NQQYLPLRDLRRRAEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ
Ga0207706_102822571	3300025933	Corn Rhizosphere	EEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ
Ga0207683_103202112	3300026121	Miscanthus Rhizosphere	RRAEEDRKLRDRWHLENRAAIAALAQKLDQHADTVSALRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEGAVKWTVGWILSHFQ
Ga0209116_10692493	3300027590	Forest Soil	MPGKLDEISRTIGAVETAIGELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGIVVFGWIVEALVKWAAGRILERFQ
Ga0209624_100545266	3300027895	Forest Soil	MPGKLDEISRTIGAVETAIGELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHAGAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILERFQ
Ga0209006_100452572	3300027908	Forest Soil	MSELRRRADEDRETRDRWHTENRAAITALSRKLDQHAAAMEVLRPTVAALELSRSKLAAWASIGFAGVVVVGWIVEATVKWAIDRAWSQLH
Ga0302232_104910113	3300028789	Palsa	MPGKLDEISRTIGAVETAIGELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGIVVFGWIVEAL
Ga0311369_100487786	3300029910	Palsa	LRRRADEDREIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWTAGRILERFQ
Ga0311338_101120465	3300030007	Palsa	MPGKLDEISRTIGAVETAIGELRRRADEDRDIRDRWHAENRAAIATLTQKLDRHADAVDMLRPAVAALEVSRSRLVALASLGFAGIVVFGWIVEALVKWAAGRILERFQ
Ga0311338_115831421	3300030007	Palsa	MPGKLDEISRTIGAVETAIGELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEAPVKWAAGRILERFQ
Ga0302300_12014131	3300030042	Palsa	QIGELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWTAGRILERFQ
Ga0311353_102133051	3300030399	Palsa	WHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWTAGRILERFQ
Ga0311370_116326832	3300030503	Palsa	RDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWTAGRILERFQ
Ga0311354_103169252	3300030618	Palsa	LRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWTAGRILERFQ
Ga0302307_104833571	3300031233	Palsa	GELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWTAGRILERFQ
Ga0307372_105261002	3300031671	Soil	ERWHAESRAAIAAMTRKLDQHAAAVETMRPAIAALELSRSKLAAWASIGFAGVVVFGWIVEASVKFAIAWIWSHLH
Ga0310686_1012783212	3300031708	Soil	MPGKLDDISRVIGAIETSVRDLRRRADEDRETRDRWYAESRTAIAALTHKIDQHAAAVEMLRPAVAALELSRSKLAAWASIGLAGVVVFGWILEAAVEWALTRALSHFP
Ga0310686_1033607311	3300031708	Soil	LRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILERFQ
Ga0310686_1042349651	3300031708	Soil	SRTIGAIETSVRELQRRADEDREIRDRWHTESRAAVAALQHKLDRHASAVEVMRPAVAALELSRSKLATWASLGFAGVVVLGWIVEATVKWAVDRLWSTLH
Ga0310686_1058571171	3300031708	Soil	GELRRRADEDRDIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGIVVFGWIVEALVKWAAGRILERFQ
Ga0310686_1119086401	3300031708	Soil	VHDLQHRADEDREIRDRWFAENRAAVASLTNKLDQHAVAVESMRPAVAALEVSRSKLATLASIGFVAVVVFGWLMEAALKVASSWIVSHFQ
Ga0310686_1163697321	3300031708	Soil	RADEDRETRDRWHTENRAAITALSRKLDQHAAAMEVLRPTVAALELSRSKLAAWASIGFAGVVVVGWIVEATVKWAIDRAWSQLH
Ga0311301_115303182	3300032160	Peatlands Soil	LRRRADEDRETRDRWHAESRAAIAAVTQKLDHHATAVDMMRPAVAALELSRSKLAAWASIGFAGVVVFGWIVEATVKFAVTWTWSHFH
Ga0335079_106656713	3300032783	Soil	MPGKLDEISRTIGAVETAIRELRRRADEDREIRDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGIVVFGWIVEALVKWAAGRILEHFQ
Ga0335079_114994442	3300032783	Soil	MAGKLDEISRAIGAIETSILELQRRADEDRDTRDRWYVETRAAIAALTHKIDRHAAAVEMMRPAVAALELSRSKLAIWASIGFAGVVVCGWAVEATVKWAIELAWSHLH
Ga0335079_118737541	3300032783	Soil	MPGKLDEISRAIGAIETSVRELRRRADEDRETRERWFAESRAAIATLTQKLDQHAAAVEMLRPAVAALELSRSKLAAYASIGFAGVVVFGWIVEATVKWAVDRAWAHLQ
Ga0335078_100125512	3300032805	Soil	MPGKLDDISRVIGAIETSVRDLRRRADEDREIRDRWYAESRAAIALLTQKIDQHAAAVEVLRPAVAALEISRSKLAAWASIGLAGVVVFGWILEATVKWALTRALSHFP
Ga0335078_102690512	3300032805	Soil	MAGKLDEISRIIGAVESSVKDLKRRADEDRKIRDRWFAENRAAIAALTEKLDQQAAAVESMRPAVAALELSRSKLATLASVGFIAVIVCGWFVQGIIKLTVSWIISHFQ
Ga0335078_105036072	3300032805	Soil	MPGKLDEISRTIGAIETAIGELRGRADEDREIRDRWHAENRAAIATLTHKLDQHAAAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEAVVKWAAGRILEHFQ
Ga0335078_107832602	3300032805	Soil	MAGKLDEISRIIGSVEAAIEELKRRTDEDREIRDRWFAEHRAAIAALTKKLDQQAAAVESMRPAVAALELSRSKLATLASVGFIAVIVCGWLVQGIIKLTVSWIVSHFQ
Ga0335078_108321353	3300032805	Soil	MPGKLDEISRTIGAIETAIGELRRRADEDREIRDRWHAENRAAIATLTHKLDQHAAAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEAVVKWASGRILEHFQ
Ga0335078_122909151	3300032805	Soil	AAAMAGKLDDISRIIGAIETSVLDLKLRADEDREIRDRWFAENRAAIASLTKKLDQHAAAVESMRPAVAALELSRSKLATLASIGFVAVVVFGWLMEAALKAASSWIVSHFQ
Ga0335081_120656872	3300032892	Soil	RDRWHAENRAAIATLTQKLDHHADAVDMLRPAVAALEVSRSRLVALASLGFAGIVVFGWIVEALVKWAAGRILEHFQ
Ga0335075_111429881	3300032896	Soil	MPGKLDEISRTIGAVETAIRELRGRADEDREIRDRWHAENRAAIATLTQKLDHHADAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILEHFQ
Ga0335075_113438251	3300032896	Soil	ETSVAELQLHADEDREIRDRWHAENREAIAALTRKLDQHAATVEMMRPAVAAFEVSRSKLAAWASLGFAGLVVLGWIVEASVKWAIEQAWSQLH
Ga0335075_114799942	3300032896	Soil	MPGKLDEISRTIGAVETAIRELRGRADEDRDIRDRWHAENRAAIATLTQKLDHHAGAVEMLRPAVAALEVSRSRLVALASLGFAGVVVFGWIVEALVKWAAGRILEHFQ
Ga0335076_116439242	3300032955	Soil	SPSGRMNATTERNDMAGKLDEISRAIGAIETSILELQRRADEDRDTRDRWYAETRAAIAALTGKIDQHAAAVEVMRPAVAALELSRSKLAIWASIGFAGVVVCGWAVEATVKWAIELAWSHLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101581

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences