Metagenome / Metatranscriptome Family F101561

Basic Information
Family ID	F101561
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	50 residues
Representative Sequence	DRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Number of Associated Samples	99
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.96 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	88.24 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (51.961 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.490 % of family members)
Environment Ontology (ENVO)	Unclassified (28.431 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.294 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.17% β-sheet: 21.74% Coil/Unstructured: 76.09%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF01926	MMR_HSR1	78.43
PF14714	KH_dom-like	12.75
PF00202	Aminotran_3	5.88
PF04149	DUF397	0.98
PF13649	Methyltransf_25	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
All Organisms	root	All Organisms	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
cellular organisms	root	All Organisms → cellular organisms	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	4.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	4.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.96 %
Mycobacterium kansasii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	4.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M101A3OH6	Not Available	514	Open in IMG/M
2189573004\|GZGWRS401AJKFU	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	532	Open in IMG/M
2199352024\|deeps__Contig_182618	Not Available	776	Open in IMG/M
3300004114\|Ga0062593_102751248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300005174\|Ga0066680_10432538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300005176\|Ga0066679_10702231	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005332\|Ga0066388_108758517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300005338\|Ga0068868_101688726	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005339\|Ga0070660_101278650	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005459\|Ga0068867_100110164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2114	Open in IMG/M
3300005468\|Ga0070707_100180904	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300005471\|Ga0070698_100033036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5360	Open in IMG/M
3300005518\|Ga0070699_101538563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300005535\|Ga0070684_100247090	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300005543\|Ga0070672_100107311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2272	Open in IMG/M
3300005545\|Ga0070695_101190098	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005553\|Ga0066695_10319608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	977	Open in IMG/M
3300005564\|Ga0070664_100212651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1728	Open in IMG/M
3300005568\|Ga0066703_10740351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300005575\|Ga0066702_10499429	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005843\|Ga0068860_100457527	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300006032\|Ga0066696_10313050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300006176\|Ga0070765_100785710	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300006800\|Ga0066660_10752365	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300007788\|Ga0099795_10009732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2801	Open in IMG/M
3300009545\|Ga0105237_11797570	Not Available	620	Open in IMG/M
3300010048\|Ga0126373_10830524	Not Available	987	Open in IMG/M
3300010303\|Ga0134082_10285180	Not Available	689	Open in IMG/M
3300010325\|Ga0134064_10119445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	885	Open in IMG/M
3300010375\|Ga0105239_12264723	Not Available	632	Open in IMG/M
3300010865\|Ga0126346_1270995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2469	Open in IMG/M
3300012201\|Ga0137365_10191989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1528	Open in IMG/M
3300012201\|Ga0137365_11299003	Not Available	516	Open in IMG/M
3300012207\|Ga0137381_11551602	Not Available	553	Open in IMG/M
3300012351\|Ga0137386_11003431	Not Available	594	Open in IMG/M
3300012351\|Ga0137386_11251890	Not Available	517	Open in IMG/M
3300012353\|Ga0137367_10755799	Not Available	676	Open in IMG/M
3300012387\|Ga0134030_1300425	Not Available	771	Open in IMG/M
3300012476\|Ga0157344_1017533	Not Available	589	Open in IMG/M
3300012482\|Ga0157318_1013209	Not Available	648	Open in IMG/M
3300012490\|Ga0157322_1015573	Not Available	678	Open in IMG/M
3300012513\|Ga0157326_1078015	Not Available	537	Open in IMG/M
3300012960\|Ga0164301_11588550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300012975\|Ga0134110_10380181	Not Available	623	Open in IMG/M
3300017933\|Ga0187801_10280632	Not Available	674	Open in IMG/M
3300017936\|Ga0187821_10190644	Not Available	785	Open in IMG/M
3300017942\|Ga0187808_10154167	Not Available	1013	Open in IMG/M
3300018089\|Ga0187774_10903272	Not Available	607	Open in IMG/M
3300018482\|Ga0066669_10628854	Not Available	943	Open in IMG/M
3300019361\|Ga0173482_10375383	Not Available	653	Open in IMG/M
3300020012\|Ga0193732_1040969	Not Available	797	Open in IMG/M
3300021178\|Ga0210408_10117098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2099	Open in IMG/M
3300021406\|Ga0210386_11003343	Not Available	712	Open in IMG/M
3300021432\|Ga0210384_11434742	Not Available	595	Open in IMG/M
3300021857\|Ga0213849_1267346	Not Available	637	Open in IMG/M
3300024178\|Ga0247694_1025657	Not Available	661	Open in IMG/M
3300024279\|Ga0247692_1064473	Not Available	572	Open in IMG/M
3300025900\|Ga0207710_10063630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1679	Open in IMG/M
3300025904\|Ga0207647_10256863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1001	Open in IMG/M
3300025916\|Ga0207663_10921418	Not Available	699	Open in IMG/M
3300025931\|Ga0207644_10139467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1865	Open in IMG/M
3300025932\|Ga0207690_11742842	Not Available	520	Open in IMG/M
3300026023\|Ga0207677_10777881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	855	Open in IMG/M
3300026041\|Ga0207639_11441750	Not Available	646	Open in IMG/M
3300026304\|Ga0209240_1190999	Not Available	619	Open in IMG/M
3300026310\|Ga0209239_1206818	Not Available	700	Open in IMG/M
3300026343\|Ga0209159_1232962	Not Available	564	Open in IMG/M
3300026490\|Ga0257153_1094678	Not Available	594	Open in IMG/M
3300026557\|Ga0179587_10845962	Not Available	603	Open in IMG/M
3300027512\|Ga0209179_1078760	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300027725\|Ga0209178_1317114	Not Available	577	Open in IMG/M
3300027824\|Ga0209040_10041743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2823	Open in IMG/M
3300028714\|Ga0307309_10165331	Not Available	567	Open in IMG/M
3300030510\|Ga0268243_1105002	Not Available	659	Open in IMG/M
3300031546\|Ga0318538_10380760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300031549\|Ga0318571_10241289	Not Available	661	Open in IMG/M
3300031564\|Ga0318573_10179531	Not Available	1118	Open in IMG/M
3300031680\|Ga0318574_10386690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300031681\|Ga0318572_10024363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3082	Open in IMG/M
3300031682\|Ga0318560_10190894	Not Available	1093	Open in IMG/M
3300031770\|Ga0318521_11032631	Not Available	504	Open in IMG/M
3300031798\|Ga0318523_10152187	Not Available	1150	Open in IMG/M
3300031805\|Ga0318497_10035552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2508	Open in IMG/M
3300031819\|Ga0318568_10024380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3316	Open in IMG/M
3300031846\|Ga0318512_10054284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1795	Open in IMG/M
3300031860\|Ga0318495_10310920	Not Available	700	Open in IMG/M
3300031894\|Ga0318522_10130866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	941	Open in IMG/M
3300031897\|Ga0318520_10121236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1489	Open in IMG/M
3300031947\|Ga0310909_10868787	Not Available	742	Open in IMG/M
3300032001\|Ga0306922_10377148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1520	Open in IMG/M
3300032041\|Ga0318549_10194450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	910	Open in IMG/M
3300032054\|Ga0318570_10264876	Not Available	780	Open in IMG/M
3300032064\|Ga0318510_10407304	Not Available	580	Open in IMG/M
3300032066\|Ga0318514_10640849	Not Available	565	Open in IMG/M
3300032770\|Ga0335085_12251247	Not Available	546	Open in IMG/M
3300032897\|Ga0335071_10033905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5069	Open in IMG/M
3300032954\|Ga0335083_10704613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M
3300032954\|Ga0335083_11320946	Not Available	554	Open in IMG/M
3300033004\|Ga0335084_10981354	Not Available	852	Open in IMG/M
3300033158\|Ga0335077_10513271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1265	Open in IMG/M
3300033289\|Ga0310914_10289387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	1476	Open in IMG/M
3300033412\|Ga0310810_11334988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.35%
Host-Associated	Host-Associated	17.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.45%
Plants	Host-Associated → Plants	17.65%
Aquatic	Environmental → Aquatic	4.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.84%
Freshwater	Environmental → Aquatic → Freshwater	4.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.80%
Loam	Environmental → Terrestrial → Soil → Loam	7.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.96%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021857	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - WE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_04297320	2189573001	Grass Soil	RAGRRAAEAGWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLALQKSR
FG2_10128650	2189573004	Grass Soil	MDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLALQKSR
deeps_03426350	2199352024	Soil	GPGRRRAAEASWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR
Ga0062593_1027512481	3300004114	Soil	ADGAARASRRAAEASWSTRADQDRRDQMDAAQSGKAADAVDVDTTGLDLDGVVGVIVGLVLQKSR*
Ga0066680_104325381	3300005174	Soil	RRDRMDAAQSGKAADAVEVDSTGLDLDQVVGVIVGLALQKSR*
Ga0066679_107022312	3300005176	Soil	RDRMDAAQSGKAADAVEVDSTGLDLNEVVGVIVGLVPKYLQKSR*
Ga0066388_1087585171	3300005332	Tropical Forest Soil	WSTRAEVDRRDRMDEAQSGKAADAVEIDSTGLGLDQVVGIIVGLALQKSR*
Ga0068868_1016887262	3300005338	Miscanthus Rhizosphere	RRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR*
Ga0070660_1012786501	3300005339	Corn Rhizosphere	DRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR*
Ga0068867_1001101641	3300005459	Miscanthus Rhizosphere	AEASWSTRADQDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0070707_1001809043	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	DRRDRMDAAQSGKAGDAVEVDSTELDLDGVVGVIVGLVPKPLQKSR*
Ga0070698_1000330361	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DRLDAAQSGKAADAVEIDSTGLGLDEVVGIIVGLVPQKSR*
Ga0070699_1015385632	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR*
Ga0070684_1002470902	3300005535	Corn Rhizosphere	RDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0070672_1001073113	3300005543	Miscanthus Rhizosphere	ADQDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0070695_1011900982	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	QERRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0066695_103196081	3300005553	Soil	RAAEANWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDEVVGVIVGLALQKSR*
Ga0070664_1002126511	3300005564	Corn Rhizosphere	DQDRRDRMDAAQSGKAADAIEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0066703_107403512	3300005568	Soil	SWSTRADQDRRDRMDAAQSGKAADAVEVDSTGLDLDAVVGVIVGLALQKSR*
Ga0066702_104994292	3300005575	Soil	DRRDRMDAAQSGKAADAVEVDSTGLDLDAVVGVIVGLALQKSR*
Ga0068860_1004575272	3300005843	Switchgrass Rhizosphere	AAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0066696_103130502	3300006032	Soil	ASRRAAEASWSTRAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLALQKSR*
Ga0070765_1007857102	3300006176	Soil	SGKAADAVEVDSTGLDLDEVVGVIVGLVPKYLQKSR*
Ga0066660_107523651	3300006800	Soil	QSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0099795_100097323	3300007788	Vadose Zone Soil	SRASRRAAEASWTTQAEVDRRDRMDAPQSGKAADAVEVDSTGLGLDEVVGVIVGLALQKSR*
Ga0105237_117975702	3300009545	Corn Rhizosphere	DGASRASRRAAEASWTTQAEVDRRDRMDAPQSGKAADAVEVDSTGLDLAEVVGVIVGLALQKSR*
Ga0126373_108305242	3300010048	Tropical Forest Soil	AAEASWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDEVVGVIVGLALQKSR*
Ga0134082_102851802	3300010303	Grasslands Soil	ASRRAAEASSSTRAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLHKSR*
Ga0134064_101194451	3300010325	Grasslands Soil	TRAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGFALQKSR*
Ga0105239_122647232	3300010375	Corn Rhizosphere	RRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0126346_12709951	3300010865	Boreal Forest Soil	QSGKAADAVVVDSTGLSLDEVVGIIVGLALQKSR*
Ga0137365_101919891	3300012201	Vadose Zone Soil	KAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR*
Ga0137365_112990031	3300012201	Vadose Zone Soil	RRDRMDAAQSEKAADAVEVDSTGLDLDEVVGVIVGLAMQKSR*
Ga0137381_115516021	3300012207	Vadose Zone Soil	MDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR*
Ga0137386_110034311	3300012351	Vadose Zone Soil	AEASWSTQAEVDRRDRMDAAQIGKAGDAVEVDSTELDLDGVVGVIVGLALQKSR*
Ga0137386_112518902	3300012351	Vadose Zone Soil	AQSGKAADAVQIDSTGLGLDEVVGIIVGLVPQKSR*
Ga0137367_107557991	3300012353	Vadose Zone Soil	GRRAAEASWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR*
Ga0134030_13004251	3300012387	Grasslands Soil	RRDRMDAAQSGKAADAVEVDSTGLDLNEVVGVIVGLVPKYLQKSR*
Ga0157344_10175331	3300012476	Arabidopsis Rhizosphere	QSGKAADAVEVDSTGLDLDEVVGVIVGLVPKYLQKSR*
Ga0157318_10132092	3300012482	Arabidopsis Rhizosphere	DRMDAAQSGKAADAVEIDSTGLGLDQVVGIIVGLVPKPLQKSR*
Ga0157322_10155731	3300012490	Arabidopsis Rhizosphere	KAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR*
Ga0157326_10780151	3300012513	Arabidopsis Rhizosphere	RMDAAQSEKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR*
Ga0164301_115885502	3300012960	Soil	RAVEASGSTQADQHPRDRMDAAQSGKAADAVEVDSTGLDLAEVVGIIVGLALQTSR*
Ga0134110_103801812	3300012975	Grasslands Soil	MDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLALQKSR*
Ga0187801_102806322	3300017933	Freshwater Sediment	DAAQSGKAADAVEIDSTGLGLDEVVGIIVGLVPQSLQKSR
Ga0187821_101906441	3300017936	Freshwater Sediment	SRRAAEASWTTRAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDEVVGVIVGLVPKYLQQS
Ga0187808_101541672	3300017942	Freshwater Sediment	LDAAQSGKADAVEIDSTGLGLDEVVGLIVGLVPQALQKSR
Ga0187774_109032722	3300018089	Tropical Peatland	DQDRRDRLDAAQSGKAADAVEIDSTGLGLDEVIGLIVGLVPQSLQKSR
Ga0066669_106288542	3300018482	Grasslands Soil	AEVDRGDRMDAAQSGKAADAVEVDSTGLDLDEVVGVIVGLVPKYLQKSR
Ga0173482_103753831	3300019361	Soil	AARASRRAAEASWSTRADQDRRDRMDAAQSGKAADAIEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0193732_10409692	3300020012	Soil	EVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR
Ga0210408_101170983	3300021178	Soil	RADRRAAEASWSTRADQDRRDRMDAAQSGKAADAVEVDSTGLDLDAVVGVIVGLALQKSR
Ga0210386_110033431	3300021406	Soil	AQSGKAADAVEIDSTGLGLDEVVGIIVGLSLQKSR
Ga0210384_114347421	3300021432	Soil	QSGKAADAVEVDSTGLDLNEVVGVIVGLVPKYLQKSR
Ga0213849_12673461	3300021857	Watersheds	RRDRMDAAQSGKAADAVEVDSTGLDLAEVVGVIVGLVPKYLQKSR
Ga0247694_10256572	3300024178	Soil	SRRAAEASWSTRADQDRRDRMDAAQSGKAADAIEVDSTGLDLDGVVGVIVGLVPKSLQKS
Ga0247692_10644732	3300024279	Soil	DAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0207710_100636301	3300025900	Switchgrass Rhizosphere	AAEASWSTRADQDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0207647_102568631	3300025904	Corn Rhizosphere	DRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0207663_109214181	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	EVDRRDQMDAPQSGKAADAVEVDSTGLGLDEVVGVIVGLALQKSR
Ga0207644_101394671	3300025931	Switchgrass Rhizosphere	GKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0207690_117428422	3300025932	Corn Rhizosphere	AAEASWSTQADQDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0207677_107778811	3300026023	Miscanthus Rhizosphere	DRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0207639_114417501	3300026041	Corn Rhizosphere	QDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0209240_11909992	3300026304	Grasslands Soil	AAEASWSTQADQDRRDRMDAAQSGKAADAVEVDSTGLGLDEVVGVIVGLALQKSR
Ga0209239_12068182	3300026310	Grasslands Soil	GVDRRDRMDAAQSGKAGDAVEVDSTELDLDGVVGVIVGLVPKPLQKSR
Ga0209159_12329622	3300026343	Soil	RAAEANWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDEVVGVIVGLALQKSR
Ga0257153_10946781	3300026490	Soil	RAAEASWSTQADQDRRDRMDAAQSGKAADAVEVDSTGLGLDEVVGVIVGLALQKSR
Ga0179587_108459622	3300026557	Vadose Zone Soil	RRAAEASWSTQADQDRRDRMDAAQSGKAADAVEVDSTGLGLDEVVGVIVGLALQKSR
Ga0209179_10787602	3300027512	Vadose Zone Soil	MAADQDRRDRMDAAQSGKAADAVEVDSTGLGLDEVVGVIVGLALQKSR
Ga0209178_13171141	3300027725	Agricultural Soil	RDRMDAAQSGKAADAVEVDSTGLDLDGVVGIIVGLVPKSLQKSR
Ga0209040_100417434	3300027824	Bog Forest Soil	RDRLDAAQSGKAADAVEIDSTGLGLDEVVGIIVGLVPQALQKSR
Ga0307309_101653311	3300028714	Soil	TQAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR
Ga0268243_11050022	3300030510	Soil	AEANWSTRAEVDRRDQMDAAQSGKAADAVEVDSTGLDLDEVVSVIVGLALQKSR
Ga0318538_103807601	3300031546	Soil	ARASRRAGEATWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLSLDQVIGIIVGLALQKRQKSR
Ga0318571_102412892	3300031549	Soil	RASRRAGEASWSTRAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDEVTGIIVGLALQKSK
Ga0318573_101795312	3300031564	Soil	ARASRRAAEASWSTRAEVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKS
Ga0318574_103866902	3300031680	Soil	DGSARASRRAAEASWSTRAEVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0318572_100243631	3300031681	Soil	AGASRRAAAASWPTRAVVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKS
Ga0318560_101908941	3300031682	Soil	ASRRAGEASWSTRAEVDRRDRMDAAQSGKAADAVEVDSTGLGLDEVVGIIVGLVLQKSK
Ga0318521_110326312	3300031770	Soil	ASRRAGEASWSTRAEVDRRDRMDAAQSGKAADAVEVDSTGLDLDEVTGIIVGLALQKSK
Ga0318523_101521871	3300031798	Soil	AASWSTRAEVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0318497_100355523	3300031805	Soil	RAVVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0318568_100243804	3300031819	Soil	AAEASWSTRAEVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0318512_100542841	3300031846	Soil	AGEATWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLSLDQVIGIIVGLALQKRQKSR
Ga0318495_103109201	3300031860	Soil	TRAEVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0318522_101308662	3300031894	Soil	DRRDRMDAAQSGKAADAVEVDSTGLSLDQVIGIIVGLALQKRQKSR
Ga0318520_101212362	3300031897	Soil	VDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0310909_108687872	3300031947	Soil	TADGAARAGRRAAEASWSTRAEVDRRDRMDAAQSGKAADAVEVDSTGLGLAEVVGIIVGLVPKSLKKSR
Ga0306922_103771482	3300032001	Soil	ASWSTRAEVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0318549_101944502	3300032041	Soil	TSARVDRRDRMDAAQSGKAADAVEVDSTGLDLDEVTGIIVGLALQKSK
Ga0318570_102648761	3300032054	Soil	LTADGAARASRRAGEATWSTQAEVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0318510_104073041	3300032064	Soil	ASRRAAEASWSTQAEVDRRDRMDAAQSGKAADAVEIDSTGLGLDQVVGVIVGLALQKSR
Ga0318514_106408491	3300032066	Soil	AAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0335085_122512472	3300032770	Soil	STQAVVDRRDRMDAAQSGKAADAVEIDSTGLGLDQVVGIIVGLALQKSR
Ga0335071_100339056	3300032897	Soil	MDAAQSSQAADAVEVDSTGLDLDEVVAIIVGLVPKSARKST
Ga0335083_107046132	3300032954	Soil	EAGWSTRAEVDRRDRMDAAQSGKAADAVEVDSTGLDLNGVVGVIVGLVPKPLQKSR
Ga0335083_113209462	3300032954	Soil	EVDRRDRMDAAQSGKAADAVEVDSTGLGLDEVVGIIVGLALQKSR
Ga0335084_109813541	3300033004	Soil	AARAGRRAAVASWSTLAAVDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKPLQKSR
Ga0335077_105132712	3300033158	Soil	ADGAARAGRRAAEASWSTQAEVDRRDRMDAAQSGKAADAVEVDSTGLDLNGVVGVIVGLVPKPLQKSR
Ga0310914_102893872	3300033289	Soil	STRAEVDRRDRMDAAQSGKAADAVQIDSTGLGLDQVVGIIVGLALQKSR
Ga0310810_113349882	3300033412	Soil	RRAAEASWSTRADQDRRDRMDAAQSGKAADAVEVDSTGLDLDGVVGVIVGLVPKSLQKSR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101561

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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