NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F101459

Metagenome Family F101459

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101459
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 67 residues
Representative Sequence TTTTAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Number of Associated Samples 96
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.61 %
% of genes near scaffold ends (potentially truncated) 32.35 %
% of genes from short scaffolds (< 2000 bps) 85.29 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.039 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(14.706 % of family members)
Environment Ontology (ENVO) Unclassified
(42.157 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(71.569 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 64.71%    β-sheet: 0.00%    Coil/Unstructured: 35.29%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF01872RibD_C 37.25
PF02325YGGT 32.35
PF01717Meth_synt_2 7.84
PF01266DAO 2.94
PF13191AAA_16 0.98
PF04107GCS2 0.98
PF01032FecCD 0.98
PF01596Methyltransf_3 0.98
PF13743Thioredoxin_5 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 37.25
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 37.25
COG0762Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT familyPosttranslational modification, protein turnover, chaperones [O] 32.35
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 7.84
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 0.98
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 0.98
COG4123tRNA1(Val) A37 N6-methylase TrmN6Translation, ribosomal structure and biogenesis [J] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.04 %
UnclassifiedrootN/A1.96 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002073|JGI24745J21846_1007634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1212Open in IMG/M
3300002075|JGI24738J21930_10092276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora641Open in IMG/M
3300002077|JGI24744J21845_10100123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora535Open in IMG/M
3300004156|Ga0062589_100677113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora911Open in IMG/M
3300004479|Ga0062595_101051544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales706Open in IMG/M
3300004480|Ga0062592_102665949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora505Open in IMG/M
3300004643|Ga0062591_101803204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora624Open in IMG/M
3300005093|Ga0062594_101186633All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia755Open in IMG/M
3300005327|Ga0070658_10280786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1417Open in IMG/M
3300005327|Ga0070658_11659465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria553Open in IMG/M
3300005329|Ga0070683_100161466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2126Open in IMG/M
3300005329|Ga0070683_101308596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales696Open in IMG/M
3300005329|Ga0070683_101619411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales622Open in IMG/M
3300005329|Ga0070683_101988854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria558Open in IMG/M
3300005336|Ga0070680_100312770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1333Open in IMG/M
3300005337|Ga0070682_100208171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1384Open in IMG/M
3300005337|Ga0070682_101483414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria582Open in IMG/M
3300005338|Ga0068868_101203823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria700Open in IMG/M
3300005339|Ga0070660_100038526All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3629Open in IMG/M
3300005341|Ga0070691_10389612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora783Open in IMG/M
3300005343|Ga0070687_100105208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1588Open in IMG/M
3300005344|Ga0070661_100486111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora986Open in IMG/M
3300005354|Ga0070675_100595436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1002Open in IMG/M
3300005356|Ga0070674_100325010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1234Open in IMG/M
3300005364|Ga0070673_100070770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2800Open in IMG/M
3300005366|Ga0070659_100985289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales739Open in IMG/M
3300005435|Ga0070714_101435786All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora674Open in IMG/M
3300005466|Ga0070685_10054540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2319Open in IMG/M
3300005547|Ga0070693_100296260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1089Open in IMG/M
3300005548|Ga0070665_101559731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales668Open in IMG/M
3300005549|Ga0070704_101648441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia592Open in IMG/M
3300005578|Ga0068854_100038399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3367Open in IMG/M
3300005718|Ga0068866_10250387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1083Open in IMG/M
3300006028|Ga0070717_11740641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora564Open in IMG/M
3300006196|Ga0075422_10199641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora822Open in IMG/M
3300006237|Ga0097621_100247664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1560Open in IMG/M
3300006881|Ga0068865_100121727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1941Open in IMG/M
3300006914|Ga0075436_101466559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora518Open in IMG/M
3300006954|Ga0079219_10028435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae2177Open in IMG/M
3300009011|Ga0105251_10071549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1613Open in IMG/M
3300009174|Ga0105241_10921210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora813Open in IMG/M
3300009553|Ga0105249_12988867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia543Open in IMG/M
3300010373|Ga0134128_10172345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2443Open in IMG/M
3300010399|Ga0134127_10611354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1120Open in IMG/M
3300011119|Ga0105246_10380156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1167Open in IMG/M
3300012895|Ga0157309_10338488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria520Open in IMG/M
3300012901|Ga0157288_10144895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora702Open in IMG/M
3300012904|Ga0157282_10367313Not Available529Open in IMG/M
3300012910|Ga0157308_10268586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora610Open in IMG/M
3300012955|Ga0164298_10268754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1039Open in IMG/M
3300012986|Ga0164304_10552487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora851Open in IMG/M
3300012988|Ga0164306_10108170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1827Open in IMG/M
3300012989|Ga0164305_11474688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia602Open in IMG/M
3300013100|Ga0157373_11152250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria583Open in IMG/M
3300013297|Ga0157378_11304414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria767Open in IMG/M
3300013306|Ga0163162_12685415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300013307|Ga0157372_13001651All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia539Open in IMG/M
3300014326|Ga0157380_10082344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2634Open in IMG/M
3300014969|Ga0157376_10891892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora907Open in IMG/M
3300015201|Ga0173478_10611145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora568Open in IMG/M
3300017792|Ga0163161_10254533All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300018476|Ga0190274_10332409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1434Open in IMG/M
3300019767|Ga0190267_11114082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora568Open in IMG/M
3300025898|Ga0207692_10854195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia597Open in IMG/M
3300025899|Ga0207642_10101488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1445Open in IMG/M
3300025901|Ga0207688_10001850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria11318Open in IMG/M
3300025904|Ga0207647_10126015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1507Open in IMG/M
3300025909|Ga0207705_10163696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1672Open in IMG/M
3300025911|Ga0207654_10248312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1192Open in IMG/M
3300025917|Ga0207660_10716764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora816Open in IMG/M
3300025918|Ga0207662_10102305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1777Open in IMG/M
3300025920|Ga0207649_10706297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora782Open in IMG/M
3300025923|Ga0207681_10794558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora790Open in IMG/M
3300025924|Ga0207694_11359442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora600Open in IMG/M
3300025925|Ga0207650_11076364All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora684Open in IMG/M
3300025926|Ga0207659_10086376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2332Open in IMG/M
3300025931|Ga0207644_10183881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1640Open in IMG/M
3300025933|Ga0207706_10075981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae2955Open in IMG/M
3300025935|Ga0207709_10363454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1096Open in IMG/M
3300025936|Ga0207670_10739653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia816Open in IMG/M
3300025938|Ga0207704_10767425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora803Open in IMG/M
3300025942|Ga0207689_10044130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3685Open in IMG/M
3300025944|Ga0207661_11488723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora620Open in IMG/M
3300025944|Ga0207661_12107841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia510Open in IMG/M
3300025961|Ga0207712_10420179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1128Open in IMG/M
3300026041|Ga0207639_10597402All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1017Open in IMG/M
3300026075|Ga0207708_10075305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2588Open in IMG/M
3300026088|Ga0207641_12478940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora517Open in IMG/M
3300026116|Ga0207674_10148343All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2303Open in IMG/M
3300027907|Ga0207428_11010718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia584Open in IMG/M
3300028587|Ga0247828_10191715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1058Open in IMG/M
3300028590|Ga0247823_11181492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora573Open in IMG/M
3300028597|Ga0247820_10159722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora1413Open in IMG/M
3300028710|Ga0307322_10237981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora504Open in IMG/M
3300028811|Ga0307292_10384007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora596Open in IMG/M
3300028875|Ga0307289_10245371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora737Open in IMG/M
3300030336|Ga0247826_10031955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2708Open in IMG/M
3300030514|Ga0268253_10135736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia750Open in IMG/M
3300031908|Ga0310900_10647214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora841Open in IMG/M
3300032013|Ga0310906_11142900Not Available565Open in IMG/M
3300032080|Ga0326721_10384707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria808Open in IMG/M
3300033551|Ga0247830_10830865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria735Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere9.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere7.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.86%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.90%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.92%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.94%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.98%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.98%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002073Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4Host-AssociatedOpen in IMG/M
3300002075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4Host-AssociatedOpen in IMG/M
3300002077Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030514Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24745J21846_100763443300002073Corn, Switchgrass And Miscanthus RhizosphereAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
JGI24738J21930_1009227623300002075Corn RhizosphereRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
JGI24744J21845_1010012313300002077Corn, Switchgrass And Miscanthus RhizosphereQRSRRNPITEVRTDDRDXQRLLDDLRALSNTRADFATACASRRSGR*
Ga0062589_10067711313300004156SoilFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0062595_10105154423300004479SoilMTTTTTTAAAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0062592_10266594913300004480SoilTSAALFAGFAQLLARVQRSRRNPITELRTDDRDRQRLLDDLRALSNTRADFATACASRRSGR*
Ga0062591_10180320413300004643SoilMTTTTTAAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0062594_10118663323300005093SoilMTTTTAATPCAGPFAGFAQLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070658_1028078643300005327Corn RhizosphereMTTTTTAAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070658_1165946513300005327Corn RhizosphereMTTTTTTTGAGPFAGFAQLLARAQRPRRNPIVGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070683_10016146613300005329Corn RhizosphereMTTTTATATTSPDAPFAGFARLLARVQRPRRNPIVEMRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070683_10130859623300005329Corn RhizosphereMTTTTTTGAGPFAGFAQLLARAQRPRRNPIVGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070683_10161941123300005329Corn RhizosphereMTTTTATTTSAAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070683_10198885423300005329Corn RhizosphereMTTTTATTCAGPFAGFAQLLARVQRPRRNPIAGMRTDDRDQQRLLDELRALSDTRSDFATACASRRSGR*
Ga0070680_10031277013300005336Corn RhizosphereLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070682_10020817123300005337Corn RhizosphereMTTTTTTAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070682_10148341413300005337Corn RhizosphereMTTTTTTTAASAAPFAGFAQLLARAQRPRRNPIVGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0068868_10120382313300005338Miscanthus RhizosphereMTTTTTGAGPFAGFAQLLARVQRPRRNPIVGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070660_10003852613300005339Corn RhizosphereATATTSPDAPFAGFARLLARVQRPRRNPIVEMRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070691_1038961213300005341Corn, Switchgrass And Miscanthus RhizosphereMTTTTTGAGPFAGFAQLLARAQRPRRNPIVGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070687_10010520823300005343Switchgrass RhizosphereMTTTTTTTAAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070661_10048611113300005344Corn RhizosphereMTTTTATTTSAAPFAGFAQLLARVQRSRRNPVPEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070675_10059543623300005354Miscanthus RhizosphereMTTTTTTAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070674_10032501023300005356Miscanthus RhizosphereMTTTTTTAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070673_10007077023300005364Switchgrass RhizosphereMTTTTTTTSAAPFAGFAQLLARVQRSRRNPITEVRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070659_10098528923300005366Corn RhizosphereMTTTTTTAAAASPAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070714_10143578623300005435Agricultural SoilATPCAGPFAGFAQLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0070685_1005454023300005466Switchgrass RhizosphereMTTTTTAAAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070693_10029626013300005547Corn, Switchgrass And Miscanthus RhizosphereMTTTTTTAASPAPFAAFAQLLARVQRSRRNPITEVRIDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070665_10155973123300005548Switchgrass RhizosphereMTTTTTTAAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070704_10164844113300005549Corn, Switchgrass And Miscanthus RhizosphereMTTTTTTAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASR
Ga0068854_10003839943300005578Corn RhizosphereMTTTTTAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0068866_1025038723300005718Miscanthus RhizosphereMTTTTTTTAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0070717_1174064123300006028Corn, Switchgrass And Miscanthus RhizosphereGPFAGFAQLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0075422_1019964113300006196Populus RhizosphereVMTTTTATTCAGPFAGFAQLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0097621_10024766433300006237Miscanthus RhizosphereLLARVQRPRRNPIVEMRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0068865_10012172733300006881Miscanthus RhizosphereMTTTTTAAAAASRAPFAAFAQLLARVQRSRRNPITEVRIDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0075436_10146655913300006914Populus RhizosphereAQLLARVQRPRRNPIAGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0079219_1002843513300006954Agricultural SoilMTTTTAATPCAGPFAGFAQLLARVQRPRRNPIPGMRTDARDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0105251_1007154913300009011Switchgrass RhizosphereMTTTTTAAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0105241_1092121013300009174Corn RhizosphereMTTTTAATPCAGPFAGFAQLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRADFATACASRRSGR*
Ga0105249_1298886713300009553Switchgrass RhizosphereMTTTTATATTSPDAPFAGFARLLARVQRPRRNPIVEMRTDDRDRQRLLDDLRALSDTRSD
Ga0134128_1017234513300010373Terrestrial SoilMTTTTTTAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0134127_1061135423300010399Terrestrial SoilMTTTTAATPCAGPFAGFAQLLARVQRPRRNPIVGMRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0105246_1038015623300011119Miscanthus RhizosphereMTTTTAATPCAGPFAGFAQLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0157309_1033848823300012895SoilMTTTTTTCAGPFAGFAQLLARVQRPRRNPIAGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0157288_1014489513300012901SoilQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0157282_1036731313300012904SoilMTTTTTTAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0157308_1026858613300012910SoilTTTTAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0164298_1026875433300012955SoilMTTTATTTTSAAPFAGFAQLLDRVRRPRRNPIAGMRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0164304_1055248723300012986SoilQDRRPVMTTTATTTTSAAPFAGFAQLLDRVRRPRRNPIAGMRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0164306_1010817033300012988SoilAQLLARVQRSRRNPITEVRIDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0164305_1147468823300012989SoilMTTTTTATTCAGPFAGFAQLLARVQRPRRNPIAGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0157373_1115225023300013100Corn RhizosphereMTTTTATTTSAAPFAGFAQLLARVQRSRRNPITEARIDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0157378_1130441423300013297Miscanthus RhizosphereMTTTTTTGAGPFAGFAQLLARAQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR*
Ga0163162_1268541513300013306Switchgrass RhizosphereMTTTTATTCAGPFAGFARLLARVQRPRRNPIVEMRTDDRDRQRLLADLRALSDTRSDFATACASRRSGR*
Ga0157372_1300165113300013307Corn RhizosphereMTTTTTTGAGPFAGFAQLLARVQRPRRNPIVGMRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0157380_1008234443300014326Switchgrass RhizosphereMTTTTTTAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTWADFATACASRRSGR*
Ga0157376_1089189223300014969Miscanthus RhizosphereMTTTTTTAASRAPYAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0173478_1061114513300015201SoilMTTTTTAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR*
Ga0163161_1025453343300017792Switchgrass RhizosphereMTTTTTATTCAGPFAGFAQLLARVQRPRRNPIVGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0190274_1033240923300018476SoilMTTTTTTSTAPFAGFAQLLARVQRSRRNPITGVRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0190267_1111408213300019767SoilMTTTTASTSAAPFAAFAQMLGRVQRSRRNPIAGTRTDDRDRQRLLDDLRALFDTRADFATACASRRSGR
Ga0207692_1085419523300025898Corn, Switchgrass And Miscanthus RhizosphereMTTTTAATPCAGPFAGFAQLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0207642_1010148833300025899Miscanthus RhizosphereMTTTTTTTAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207688_1000185073300025901Corn, Switchgrass And Miscanthus RhizosphereMTTTTTTAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207647_1012601533300025904Corn RhizosphereMTTTTTAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207705_1016369643300025909Corn RhizosphereMTTTTTAAAASPAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207654_1024831233300025911Corn RhizosphereMTTTTATATTSPDAPFAGFARLLARVQRPRRNPIVEMRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR
Ga0207660_1071676413300025917Corn RhizosphereGFARLLARVQRPRRNPIVEMRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR
Ga0207662_1010230513300025918Switchgrass RhizosphereMTTTTTTTAAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207649_1070629723300025920Corn RhizosphereMTTTTTAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207681_1079455813300025923Switchgrass RhizosphereTTTAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207694_1135944223300025924Corn RhizosphereMTTTTTTTGAGPFAGFAQLLARAQRPRRNPIVGMRTDDRDEQRLLDDLRALSDTRSDFATACASRRSGR
Ga0207650_1107636423300025925Switchgrass RhizosphereMTTTTTAAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0207659_1008637613300025926Miscanthus RhizosphereMTTTTTTAAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207644_1018388133300025931Switchgrass RhizosphereMTTTTTTAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207706_1007598133300025933Corn RhizosphereMTTTTATATTSPDAPFAGFARLLARVQRPRRNPIVEMRTDDRDRQRLLDDLRALSNTRADFATACASRRSGR
Ga0207709_1036345423300025935Miscanthus RhizosphereMTTTTATATTSPDAPFAGFARLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207670_1073965323300025936Switchgrass RhizosphereMTTTTTGAGPFAGFAQLLARVQRPRRNPIVGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0207704_1076742523300025938Miscanthus RhizosphereSTAPFAAFAQLLARVQRSRRNPITEVRIDDRDQQRLLDDLRALSNTRADFATACASRRSG
Ga0207689_1004413033300025942Miscanthus RhizosphereMTTTTATTCAGPFAGFAQLLARVQRPRRNPIVGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0207661_1148872313300025944Corn RhizosphereTTTTTATTCAGPFAGFAQLLARVQRPRRNPIAGMRTDDRDQQRLLDELRALSDTRSDFATACASRRSGR
Ga0207661_1210784113300025944Corn RhizosphereMTTTTATTTSAAPFAGFAQLLARVQRSRRNPITELRTDDRDRQRLLDDLRALSNARADFATACASR
Ga0207712_1042017933300025961Switchgrass RhizosphereMTTTTTTAAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDRQRLLDDLRALSNTRADFATACASRRSGR
Ga0207639_1059740233300026041Corn RhizosphereAAAASPAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207708_1007530533300026075Corn, Switchgrass And Miscanthus RhizosphereMTTTTTAAAASPAPFAGFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207641_1247894013300026088Switchgrass RhizosphereFAQLLARVQRPRRNPIPGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0207674_1014834333300026116Corn RhizosphereMTTTTTAAAAAASRAPFAAFAQLLARVQRSRRNPITEVRTDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0207428_1101071823300027907Populus RhizosphereMTTTTATTCAGPFAGFAQLLARVQRPRRNPIAGMRTDDRDQQRLLDDLRALSDTRSDFAT
Ga0247828_1019171513300028587SoilATTTSTSPFAAFAQLLARVQRSRRNPITEVRIDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0247823_1118149213300028590SoilVNGYRKTHRKDRRPVMTTTTATTSAAPFAGFAQLLARVQRPRRNPIAGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0247820_1015972233300028597SoilMTTTTTTATCAGPFAGFAQLLARVQRPRRNPIAGMRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0307322_1023798113300028710SoilQLLARVQRSRRNPITGVRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0307292_1038400723300028811SoilMTTTATTSAAPFAAFAQLLARVQLSRRNPIAGTRTDDRDRQRLLDDLRALSETRADFATACASRRSGR
Ga0307289_1024537123300028875SoilFAGFAQLLARVQRSRRNPITEVRTDDRDRQRLLDDLRALSDTRSDFATACASRRSGR
Ga0247826_1003195543300030336SoilPFAAFAQLLARVQRSRRNPITEVRIDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0268253_1013573623300030514AgaveMTTTATTSAAPFAGFAQLLARVRRSRRNPSPFTGVRTDDRDQQRLLDDLRALSDTRADFATACASRRSGR
Ga0310900_1064721413300031908SoilVQRSRRNPITEARIDDRDQQRLLDDLRALSNTRADFATACASRRSGR
Ga0310906_1114290023300032013SoilMTTTTTSAAPFAGFAQLLARVQRSRRNPVPEVRTDDRDQQRLLDDLRALSDTRSDFATACASRRSGR
Ga0326721_1038470723300032080SoilMTTTTPATTSAAPFAGFAQLIARVQRSRRNPITELRTVDRDRQRLLDDLRALSNTRADFATACASRRSGR
Ga0247830_1083086523300033551SoilMTTTTATTSAAPFAGFAQLLARVQRSRRNPVPEVRTDDRDQQRLLDDLRALSDTRADFATACASRRSGR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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