Metagenome / Metatranscriptome Family F101424

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F101424
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	70 residues
Representative Sequence	MNYIEGLKIIGWIAIIVVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVIGLFVASLPAMFKKRN
Number of Associated Samples	76
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	91.18 %
% of genes near scaffold ends (potentially truncated)	11.76 %
% of genes from short scaffolds (< 2000 bps)	70.59 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Predicted Viral (48.039 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (87.255 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (40.196 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.20% β-sheet: 0.00% Coil/Unstructured: 39.80%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13479	AAA_24	31.37
PF04233	Phage_Mu_F	1.96
PF08542	Rep_fac_C	1.96
PF00004	AAA	0.98
PF00842	Ala_racemase_C	0.98
PF00961	LAGLIDADG_1	0.98
PF00692	dUTPase	0.98
PF05869	Dam	0.98
PF10145	PhageMin_Tail	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2812	DNA polymerase III, gamma/tau subunits	Replication, recombination and repair [L]	1.96
COG0470	DNA polymerase III, delta prime subunit	Replication, recombination and repair [L]	1.96
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.98
COG0787	Alanine racemase	Cell wall/membrane/envelope biogenesis [M]	0.98
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.24 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	48.04 %
cellular organisms	root	All Organisms → cellular organisms	40.20 %
Unclassified	root	N/A	11.76 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.04 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	39.22 %
Unclassified	root	N/A	11.76 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.04 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	36.27 %
Unclassified	root	N/A	11.76 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.04 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	35.29 %
Unclassified	root	N/A	11.76 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.04 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	35.29 %
Unclassified	root	N/A	11.76 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.04 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	35.29 %
Unclassified	root	N/A	11.76 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.04 %
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	35.29 %
Unclassified	root	N/A	11.76 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.04 %
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	35.29 %
Unclassified	root	N/A	11.76 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000510\|Foulum_1004730	All Organisms → Viruses → Predicted Viral	1150	Open in IMG/M
3300001975\|Draft_11023192	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	501	Open in IMG/M
3300002163\|JGI24707J26582_10100653	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	871	Open in IMG/M
3300002164\|JGI24708J26588_10081557	All Organisms → Viruses → Predicted Viral	1030	Open in IMG/M
3300002166\|JGI24713J26584_10029476	All Organisms → Viruses → Predicted Viral	1648	Open in IMG/M
3300002166\|JGI24713J26584_10046776	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300002167\|JGI24714J26587_10020611	All Organisms → Viruses → Predicted Viral	2477	Open in IMG/M
3300002167\|JGI24714J26587_10041914	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300002168\|JGI24712J26585_10130129	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	784	Open in IMG/M
3300002170\|JGI24711J26586_10055121	Not Available	1275	Open in IMG/M
3300002170\|JGI24711J26586_10109882	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	735	Open in IMG/M
3300002173\|JGI24709J26583_10017107	All Organisms → Viruses → Predicted Viral	3951	Open in IMG/M
3300002173\|JGI24709J26583_10212393	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	516	Open in IMG/M
3300002378\|JGI24502J29692_10015235	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	765	Open in IMG/M
3300002391\|JGI24501J29690_1023241	All Organisms → Viruses → Predicted Viral	1164	Open in IMG/M
3300002391\|JGI24501J29690_1042293	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	632	Open in IMG/M
3300002392\|JGI24503J29689_10005135	All Organisms → Viruses → Predicted Viral	1303	Open in IMG/M
3300002392\|JGI24503J29689_10010136	All Organisms → Viruses → Predicted Viral	1694	Open in IMG/M
3300002392\|JGI24503J29689_10025198	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	762	Open in IMG/M
3300002392\|JGI24503J29689_10029051	All Organisms → Viruses → Predicted Viral	1131	Open in IMG/M
3300002837\|bg3kmer60_1087205	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	615	Open in IMG/M
3300003306\|Ga0004534J46558_1009824	All Organisms → Viruses → Predicted Viral	3294	Open in IMG/M
3300005835\|Ga0078910_102330	All Organisms → Viruses → Predicted Viral	3400	Open in IMG/M
3300006225\|Ga0082206_102009	All Organisms → Viruses → Predicted Viral	3397	Open in IMG/M
3300006225\|Ga0082206_117128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1255	Open in IMG/M
3300006360\|Ga0079079_1122311	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	528	Open in IMG/M
3300006388\|Ga0079062_1430928	All Organisms → Viruses → Predicted Viral	2414	Open in IMG/M
3300006389\|Ga0079064_1008524	All Organisms → Viruses → Predicted Viral	2227	Open in IMG/M
3300006389\|Ga0079064_1421288	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	686	Open in IMG/M
3300006398\|Ga0079067_1058960	All Organisms → Viruses → Predicted Viral	2159	Open in IMG/M
3300006805\|Ga0075464_10162687	All Organisms → Viruses → Predicted Viral	1315	Open in IMG/M
3300009095\|Ga0079224_102934281	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	681	Open in IMG/M
3300009607\|Ga0123327_1100569	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1043	Open in IMG/M
3300009652\|Ga0123330_1162176	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	807	Open in IMG/M
3300009655\|Ga0116190_1297722	Not Available	524	Open in IMG/M
3300009657\|Ga0116179_1298781	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	523	Open in IMG/M
3300009658\|Ga0116188_1312762	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	536	Open in IMG/M
3300009668\|Ga0116180_1244482	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	684	Open in IMG/M
3300009669\|Ga0116148_1076433	All Organisms → Viruses → Predicted Viral	1721	Open in IMG/M
3300009670\|Ga0116183_1030240	All Organisms → Viruses → Predicted Viral	3595	Open in IMG/M
3300009671\|Ga0123334_1039504	All Organisms → Viruses → Predicted Viral	2811	Open in IMG/M
3300009680\|Ga0123335_1076644	All Organisms → Viruses → Predicted Viral	2056	Open in IMG/M
3300009680\|Ga0123335_1122294	All Organisms → Viruses → Predicted Viral	1466	Open in IMG/M
3300009685\|Ga0116142_10021543	All Organisms → Viruses → Predicted Viral	4269	Open in IMG/M
3300009715\|Ga0116160_1075185	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1526	Open in IMG/M
3300009780\|Ga0116156_10056081	All Organisms → Viruses → Predicted Viral	2475	Open in IMG/M
3300010286\|Ga0134092_1000193	All Organisms → cellular organisms → Archaea → Euryarchaeota	64755	Open in IMG/M
3300010340\|Ga0116250_10017939	All Organisms → cellular organisms → Archaea	6552	Open in IMG/M
3300010346\|Ga0116239_10083591	All Organisms → Viruses → Predicted Viral	2725	Open in IMG/M
3300010347\|Ga0116238_10408552	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	878	Open in IMG/M
3300010351\|Ga0116248_10683124	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	728	Open in IMG/M
3300010357\|Ga0116249_10270531	All Organisms → Viruses → Predicted Viral	1572	Open in IMG/M
3300010365\|Ga0116251_10048268	All Organisms → Viruses → Predicted Viral	3292	Open in IMG/M
3300012881\|Ga0079063_1012295	All Organisms → Viruses → Predicted Viral	1942	Open in IMG/M
3300014203\|Ga0172378_10673634	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	756	Open in IMG/M
3300014203\|Ga0172378_10937451	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	621	Open in IMG/M
3300014204\|Ga0172381_11182832	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	558	Open in IMG/M
3300014204\|Ga0172381_11337662	Not Available	518	Open in IMG/M
3300014206\|Ga0172377_11375866	Not Available	531	Open in IMG/M
3300015214\|Ga0172382_10593493	Not Available	791	Open in IMG/M
3300020072\|Ga0180031_1063537	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	781	Open in IMG/M
3300025618\|Ga0208693_1004948	All Organisms → cellular organisms → Archaea	7724	Open in IMG/M
3300025629\|Ga0208824_1103341	Not Available	848	Open in IMG/M
3300025682\|Ga0209718_1030925	All Organisms → Viruses → Predicted Viral	2358	Open in IMG/M
3300025689\|Ga0209407_1033645	All Organisms → Viruses → Predicted Viral	2327	Open in IMG/M
3300025713\|Ga0208195_1083152	All Organisms → Viruses → Predicted Viral	1198	Open in IMG/M
3300025730\|Ga0209606_1093316	All Organisms → Viruses → Predicted Viral	1160	Open in IMG/M
3300025784\|Ga0209200_1031880	All Organisms → Viruses → Predicted Viral	2493	Open in IMG/M
3300026194\|Ga0209509_1128377	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	562	Open in IMG/M
3300026290\|Ga0209510_1000402	Not Available	61980	Open in IMG/M
3300026311\|Ga0209723_1078037	All Organisms → Viruses → Predicted Viral	1468	Open in IMG/M
3300026311\|Ga0209723_1130542	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	997	Open in IMG/M
3300027510\|Ga0209537_1014354	All Organisms → Viruses → Predicted Viral	4279	Open in IMG/M
3300027510\|Ga0209537_1030819	All Organisms → Viruses → Predicted Viral	2067	Open in IMG/M
(restricted) 3300028564\|Ga0255344_1125861	All Organisms → Viruses → Predicted Viral	1101	Open in IMG/M
(restricted) 3300028568\|Ga0255345_1324501	Not Available	546	Open in IMG/M
(restricted) 3300028593\|Ga0255347_1089773	All Organisms → Viruses → Predicted Viral	1750	Open in IMG/M
3300028601\|Ga0265295_1073299	All Organisms → Viruses → Predicted Viral	1867	Open in IMG/M
3300028602\|Ga0265294_10191748	All Organisms → Viruses → Predicted Viral	1480	Open in IMG/M
3300028602\|Ga0265294_10270968	All Organisms → Viruses → Predicted Viral	1153	Open in IMG/M
3300028602\|Ga0265294_10337989	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	982	Open in IMG/M
3300028602\|Ga0265294_10383255	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	896	Open in IMG/M
3300028602\|Ga0265294_10506808	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	732	Open in IMG/M
3300028602\|Ga0265294_10681115	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	590	Open in IMG/M
3300028602\|Ga0265294_10701735	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	577	Open in IMG/M
3300028602\|Ga0265294_10799257	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	524	Open in IMG/M
3300028602\|Ga0265294_10807563	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	520	Open in IMG/M
3300028603\|Ga0265293_10081966	All Organisms → Viruses → Predicted Viral	2676	Open in IMG/M
3300028624\|Ga0302246_1011558	All Organisms → Viruses → Predicted Viral	3172	Open in IMG/M
3300028624\|Ga0302246_1114513	Not Available	525	Open in IMG/M
3300028628\|Ga0302249_1086681	Not Available	644	Open in IMG/M
3300028631\|Ga0302241_1043530	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1151	Open in IMG/M
3300028634\|Ga0302242_1060395	Not Available	937	Open in IMG/M
3300028638\|Ga0302240_1060732	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	949	Open in IMG/M
3300028727\|Ga0307344_122244	Not Available	650	Open in IMG/M
3300029673\|Ga0307355_106041	All Organisms → Viruses → Predicted Viral	1506	Open in IMG/M
3300029775\|Ga0134843_1007737	All Organisms → Viruses → Predicted Viral	3654	Open in IMG/M
3300029781\|Ga0167330_1026061	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1101	Open in IMG/M
3300029822\|Ga0134854_1002039	All Organisms → cellular organisms → Archaea	16855	Open in IMG/M
3300029822\|Ga0134854_1017500	All Organisms → Viruses → Predicted Viral	2382	Open in IMG/M
3300029825\|Ga0134835_1023444	All Organisms → Viruses → Predicted Viral	2340	Open in IMG/M
3300029825\|Ga0134835_1041110	All Organisms → Viruses → Predicted Viral	1389	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	87.25%
Environmental	Environmental	12.75%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	36.27%
Biotransformation	Engineered → Biotransformation	21.57%
Bioreactor	Engineered → Bioreactor	19.61%
Aquatic	Environmental → Aquatic	11.76%
Solid Waste	Engineered → Solid Waste	6.86%
Built Environment	Engineered → Built Environment	2.94%
Terrestrial	Environmental → Terrestrial	0.98%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	35.29%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	20.59%
Freshwater	Environmental → Aquatic → Freshwater	10.78%
Anaerobic	Engineered → Bioreactor → Anaerobic	10.78%
Landfill	Engineered → Solid Waste → Landfill	6.86%
Unclassified	Engineered → Bioreactor → Unclassified	5.88%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	2.94%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	2.94%
Marine	Environmental → Aquatic → Marine	0.98%
Soil	Environmental → Terrestrial → Soil	0.98%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.98%
Unclassified	Engineered → Biotransformation → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	35.29%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	20.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	10.78%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	10.78%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	6.86%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	5.88%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	2.94%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	2.94%
Coastal	Environmental → Aquatic → Marine → Coastal	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.98%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	35.29%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	20.59%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	10.78%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	10.78%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	6.86%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	5.88%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	2.94%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.98%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	29.41%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	20.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	10.78%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	9.80%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	5.88%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	5.88%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	4.90%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	2.94%
Mixed Substrate Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Mixed Substrate Biogas Reactor	1.96%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.98%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	0.98%
Biosolids	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids	0.98%
Anaerobic Digester	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester	0.98%
Switchgrass Degrading	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading	0.98%
Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Biogas Reactor	0.98%
Biogas Reactor	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor	0.98%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000510	Anaerobic digester microbial communities from Northern Denmark, sample from Foulum manure	Engineered	Open in IMG/M
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002167	Biogas fermentation microbial communities from Germany - Plant 4 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002391	Biogas fermentation microbial communities from Germany - Plant 2 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002837	Biogas reactor microbial communities from SLU, Sweden, that are enriched on cellulose - Sample No3 60kmer	Engineered	Open in IMG/M
3300003306	Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300005835	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 1 to 3 kb reads	Engineered	Open in IMG/M
3300006225	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 99 accuracy	Engineered	Open in IMG/M
3300006360	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Val_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006388	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006389	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006398	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009652	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA	Engineered	Open in IMG/M
3300009655	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009668	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009685	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009780	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG	Engineered	Open in IMG/M
3300010286	Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 3_6_20_6_A3 metaG	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010347	AD_JPHGca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300010365	AD_USDIca	Engineered	Open in IMG/M
3300012881	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300015214	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R metaG	Engineered	Open in IMG/M
3300020072	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R2-B RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025629	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025784	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026290	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028564 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant18	Engineered	Open in IMG/M
3300028568 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant20	Engineered	Open in IMG/M
3300028593 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant24	Engineered	Open in IMG/M
3300028601	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Methane capture system biofilm	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300028624	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Trp	Engineered	Open in IMG/M
3300028628	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Val	Engineered	Open in IMG/M
3300028631	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Arg	Engineered	Open in IMG/M
3300028634	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Lys	Engineered	Open in IMG/M
3300028638	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_His	Engineered	Open in IMG/M
3300028727	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Arg1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029673	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Trp2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029775	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-4-1-220-B	Engineered	Open in IMG/M
3300029781	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP11 - Uppsala-digested 112	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M
3300029825	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-1-2-440-M	Engineered	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Foulum_10047301	3300000510	Anaerobic Digester	MNYIEGLKIIGWIVIIVVCIALLFIWYAAFCYVAYVLLGMIGITGFAQTVCGIVLGLFVASLPVMFKKRN*
Draft_110231921	3300001975	Biogas Fermenter	MNYIEELKIIGMAAFIAVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPAMFKRGTKYGTW*
JGI24707J26582_101006532	3300002163	Biogas Fermentantion	MNYIDGLKIIGAVAIAVCTALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAVFKKGN*
JGI24708J26588_100815572	3300002164	Biogas Fermentantion	GTVALIAVCTALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAVFKKGN
JGI24713J26584_100294762	3300002166	Biogas Fermentantion	MNYIEGLKIIGTIAFIVVCIALLIIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKGN*
JGI24713J26584_100467761	3300002166	Biogas Fermentantion	MNYIDGLKIIGTIAFIVVCITLLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKGN*
JGI24714J26587_100206113	3300002167	Biogas Fermentantion	MNYIDGLKIIGTIAFIVVCIALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKGN*
JGI24714J26587_100419143	3300002167	Biogas Fermentantion	MNYIEGLKIIGLIAFIVVCIAILFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYXKXXXXWHLVRKLWIKR*
JGI24712J26585_101301292	3300002168	Biogas Fermentantion	MNYIEGLKIIGWIAFIAVCTALLFIWYAAFCYIAYVLLGMIGITGLWQTICGIVLGLFVASLPAVFKKGN*
JGI24711J26586_100551211	3300002170	Biogas Fermentantion	MNYIDGLKIIGTIAFIVVCIXLLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKRN*
JGI24711J26586_101098822	3300002170	Biogas Fermentantion	MNYIEGLKIIGWIVIIVVCIALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAVFKKGN*
JGI24709J26583_100171075	3300002173	Biogas Fermentantion	MNYIDGLKIIGTIAFIVVCIALLFIWYAAFCYVAYVLLGMIGITGFAQTVCGIVLGLFVASLP
JGI24709J26583_102123932	3300002173	Biogas Fermentantion	MNYIEGLKIIGWIVLIVVCIALLFIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPMSIGHYXKR*
JGI24502J29692_100152352	3300002378	Biogas Fermentantion	MAAFIAVCVALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKGN*
JGI24501J29690_10232411	3300002391	Biogas Fermentantion	MNYIDGLKIIGTIAFIAVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPAMFKKGN*
JGI24501J29690_10422932	3300002391	Biogas Fermentantion	MNYIEGLKIIGWIAIIVVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVIGLFVASLPAMFKKRN*
JGI24503J29689_100051352	3300002392	Biogas Fermentantion	MNYIEGLKIIGWIAIIAVCTALLFIWYAAFCYIAYVLLGMIGITGFAQTICGIVLGLFV
JGI24503J29689_100101362	3300002392	Biogas Fermentantion	MNYIDGLKIIGMAAFIAVCVALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKGN*
JGI24503J29689_100251982	3300002392	Biogas Fermentantion	MNYIEGLKIIGTIAIIAVCTAFLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAVFKKGN*
JGI24503J29689_100290511	3300002392	Biogas Fermentantion	MNYIEGLKIIGWIAIIAVCTAXLFIWYAAFCYIAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
bg3kmer60_10872052	3300002837	Biogas Reactor	MNYIEGLKIIGTIAFIVVCIALLFIWYAAFCYIAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0004534J46558_10098243	3300003306	Biogas Fermentantion	MNYIDGLKIIGTVALIAVCTALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAVFKKGN*
Ga0078910_1023304	3300005835	Biogas Reactor	MNYIEGLKNIGWIVIIVVCIALLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0082206_1020093	3300006225	Mixed Substrate Biogas Reactor	MNYIEGLKXIGXIXXXVVXIALLFIWYAAFCXXAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0082206_1171282	3300006225	Mixed Substrate Biogas Reactor	MNYIEGLKIIGTIAFIVVCIALLIIWYAAFCYIAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0079079_11223112	3300006360	Anaerobic Digestor Sludge	MDYKEMLKLIGIIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPTVFKKRN*
Ga0079062_14309282	3300006388	Anaerobic Digestor Sludge	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPTAFIKRN*
Ga0079064_10085242	3300006389	Anaerobic Digestor Sludge	MNYIEGLKIIGWIVIIIVCIAFLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVIGLFVASLPTVFKKRN*
Ga0079064_14212882	3300006389	Anaerobic Digestor Sludge	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLSMSIGHYNKR*
Ga0079067_10589604	3300006398	Anaerobic Digestor Sludge	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPTVFKKRN*
Ga0075464_101626872	3300006805	Aqueous	MDYKEMLKWIGIIALVIVCIAFLIIWYAAFCYVAYVLIGMIGISGLWQTICGIVLGLFVASLPMTLARKN*
Ga0079224_1029342811	3300009095	Agricultural Soil	MNYIEGLKIIGLIALIVVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVA
Ga0123327_11005692	3300009607	Anaerobic Biogas Reactor	MDYKEMLKLIGIIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0123330_11621762	3300009652	Anaerobic Biogas Reactor	MDYKEMLKWIGIIALVIVCIAFLIIWYAAFCYVAYVLIGMIGISGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0116190_12977222	3300009655	Anaerobic Digestor Sludge	MDYITALKTIGAFAIIAVCIALLFIWYAALCYIAYVLVGMIGITGFAQIVCGIVLGLFVASFPSVSVRK*
Ga0116179_12987811	3300009657	Anaerobic Digestor Sludge	MNYIEGLKIIGMVAFIAACIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYIKR*
Ga0116188_13127622	3300009658	Anaerobic Digestor Sludge	MNYIEGLKIIGWIAIIVVCIALLFIWYVAFCYVAYVLIGMIGITGLWQIICGIVLGLFVASFPSVSVRK*
Ga0116180_12444822	3300009668	Anaerobic Digestor Sludge	MNYIEGLKIIGMVAFIAACIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYN
Ga0116148_10764332	3300009669	Anaerobic Digestor Sludge	MNYIEGLKIIGWIALIVVCIALLFIWYAAFCYVAYVLLGMIGITGLWQIICGIVLGLFVASLPMSIGHYNKR*
Ga0116183_10302402	3300009670	Anaerobic Digestor Sludge	MNYIEGLKIIGWIALIVVCIALLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLSMSIGHYNKR*
Ga0123334_10395042	3300009671	Anaerobic Biogas Reactor	MNYIEGLKIIGWIVIIVVCIAFLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0123335_10766442	3300009680	Anaerobic Biogas Reactor	MNYIEGLKIIGWIAIIVVCIALLFIWYAAFCYVAYVLIGMIGISGLWQTICGIVLGLFVASLPTVFKKRN*
Ga0123335_11222942	3300009680	Anaerobic Biogas Reactor	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0116142_100215433	3300009685	Anaerobic Digestor Sludge	MDYKEMLKLIGIIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVIGLFVASLPMSIGHYNKR*
Ga0116160_10751852	3300009715	Anaerobic Digestor Sludge	MNYIEGLKIIGMVALIVVCIALIFIWYAAFCYLGIVVVGMLGITGLWQTICGIVLGLFVASLPMTLARKN*
Ga0116156_100560814	3300009780	Anaerobic Digestor Sludge	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLIGMIGISGLWQTICGIVIGLFVASLPTVFKKRN*
Ga0134092_100019346	3300010286	Switchgrass Degrading	MNYIKGLKIIGMAAFIAVCVALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPAMFKKRN*
Ga0116250_100179397	3300010340	Anaerobic Digestor Sludge	MNYIEGLKIIGWIVLIVVCIALLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR*
Ga0116239_100835912	3300010346	Anaerobic Digestor Sludge	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLLGMIGISGLWQTICGIVLGLFVASLPTAFIKRN*
Ga0116238_104085522	3300010347	Anaerobic Digestor Sludge	MNYIEGLKIIGWIAIIVVCIALLFIWYAAFCYVAYVLIGMIGITGLWQIICGIVLGLFVASLPAMFKKRN*
Ga0116248_106831242	3300010351	Anaerobic Digestor Sludge	MNYIDGLKIIGTIALVVVCIALLFIWYAAFCYIAYVLLGMIGISGLWQTICGIVLGLFVASLPMTLARKN*
Ga0116249_102705314	3300010357	Anaerobic Digestor Sludge	LKLIGIIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPTVFKKRN*
Ga0116251_100482683	3300010365	Anaerobic Digestor Sludge	MNYIEGLKIIGWIALIVVCIALLFIWYAAFCYVAYVLIGMIGISGLWQTICGIVLGLFVASLSMSIGHYNKR*
Ga0079063_10122953	3300012881	Anaerobic Digestor Sludge	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPTVFKKRN*
Ga0172378_106736342	3300014203	Groundwater	MNYIDGLKIIGTIALVVVCIALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPTVFKKRN*
Ga0172378_109374512	3300014203	Groundwater	MNYIEGLKNVGLIAFIVVCIALLFIWYAAFCYIAYVLLGMIGITGFWQIICGIVLGLFVASLPMSIGHYNKR*
Ga0172381_111828321	3300014204	Landfill Leachate	MNYIDALKAIGLIAIVVVCIALLIVWYAAFCYVAFVILGMIGITGFAQTVCGIVFGLFVASLPAVFARK*
Ga0172381_113376622	3300014204	Landfill Leachate	MDYKEMLKLIGIIALVVVCIALLFIWYAAFCYVAYVLIGMIGITGLWQTICGIVIGLFVASLPMSIGHYNKR*
Ga0172377_113758662	3300014206	Landfill Leachate	MNYIEGLKIIGMIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVIGLFVASLPMSIGHYNKR*
Ga0172382_105934932	3300015214	Landfill Leachate	GLIAFIVVCIALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKGN
Ga0180031_10635372	3300020072	Anaerobic Biogas Reactor	MDYKEMFKWIGIIALVIVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0208693_10049487	3300025618	Anaerobic Digestor Sludge	MNYIEGLKIIGWIVLIVVCIALLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0208824_11033411	3300025629	Anaerobic Digestor Sludge	MDYITALKTIGAFAIIAVCIALLFIWYAALCYIAYVLVGMIGITGFAQIVCGIVLGLFVASFPSVSVRK
Ga0209718_10309252	3300025682	Anaerobic Digestor Sludge	MNYIEGLKIIGMVALIVVCIALIFIWYAAFCYLGIVVVGMLGITGLWQTICGIVLGLFVASLPMTLARKN
Ga0209407_10336452	3300025689	Anaerobic Digestor Sludge	MNYIEGLKIIGWIAIIVVCIALLFIWYAAFCYVAYVLIGMIGITGLWQIICGIVLGLFVASLPAMFKKRN
Ga0208195_10831522	3300025713	Anaerobic Digestor Sludge	MNYIEGLKIIGWIALIVVCIALLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLSMSIGHYNKR
Ga0209606_10933162	3300025730	Anaerobic Digestor Sludge	MNYIEGLKIIGWIALIVVCIALLFIWYAAFCYVAYVLLGMIGITGLWQIICGIVLGLFVASLPMSIGHYNKR
Ga0209200_10318802	3300025784	Anaerobic Digestor Sludge	MDYKEMLKLIGIIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVIGLFVASLPMSIGHYNKR
Ga0209509_11283772	3300026194	Anaerobic Biogas Reactor	MDYKEMLKLIGIIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0209510_100040221	3300026290	Anaerobic Biogas Reactor	MNYIEGLKIIGWIVIIVVCIAFLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0209723_10780372	3300026311	Anaerobic Biogas Reactor	MDYKEMLKWIGIIALVIVCIAFLIIWYAAFCYVAYVLIGMIGISGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0209723_11305422	3300026311	Anaerobic Biogas Reactor	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0209537_10143543	3300027510	Biogas Fermentantion	MNYIEGLKIIGTIAFIVVCIALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKGN
Ga0209537_10308193	3300027510	Biogas Fermentantion	MNYIDGLKIIGTIAFIVVCITLLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAMFKKGN
(restricted) Ga0255344_11258612	3300028564	Wastewater	MNYIEGLEIIGWIAIIVVCIALLFIWYAAFCYIAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR
(restricted) Ga0255345_13245012	3300028568	Wastewater	WIAIIVMCIALLFIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPMSIGHYNK
(restricted) Ga0255347_10897732	3300028593	Wastewater	MNYIEGLKIIGWIAIIVVCIALLFIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0265295_10732992	3300028601	Landfill Leachate	MNYIEGLKIIGMAAFIAVCVALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPAAFKKGN
Ga0265294_101917483	3300028602	Groundwater	MNYIEGLKIIGMAAFIAVCVALLIIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPAMFKKRY
Ga0265294_102709682	3300028602	Groundwater	MNYIEGLKIIGWIVIIIVCIALLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVIGLFVASLPMSIGHYNKR
Ga0265294_103379891	3300028602	Groundwater	MNYIEGLKIIGMIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVIGLFVASLPMSIGHYNKR
Ga0265294_103832552	3300028602	Groundwater	MNYIDGLKIIGTIAFIVVCIALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAVFKKGN
Ga0265294_105068082	3300028602	Groundwater	MNYIEGLKIVGWIAIIAVCTALLFIWYAAFCYIAYVLLGMIGITGLWQTICGIVLGLFVASLPAAFKKGN
Ga0265294_106811152	3300028602	Groundwater	MNYIDALKAIGLIAFIVVCIAFLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVLGLFVASLPMSIGHYN
Ga0265294_107017352	3300028602	Groundwater	MNYIDGLKIIGTIALVVVCIALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPTVFKKRN
Ga0265294_107992572	3300028602	Groundwater	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLIGMIGISGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0265294_108075632	3300028602	Groundwater	MNYIEGLKIIGMIAFVVVCIALLFIWYAAFCYIAYVLLGMIGITGFAQTVCGIVLGLFVASLPAVFKKGN
Ga0265293_100819662	3300028603	Landfill Leachate	MNYIEGLKTIGLIAFIVVCIALLIIWYAAFCYVAYVLIGMIGITGFAQTVCGIVLGLFVASLPTAFKKGN
Ga0302246_10115583	3300028624	Activated Sludge	MDYKEMLKWIGIIALVIVCIAFLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLSMSIGHYNKR
Ga0302246_11145131	3300028624	Activated Sludge	IEGLKIIGWIVIIIVCIAFLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVIGLFVASLPTVFKKRN
Ga0302249_10866812	3300028628	Activated Sludge	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLSMSIGHYNKR
Ga0302241_10435302	3300028631	Activated Sludge	MNYIEGLKIIGWIVIIIVCIAFLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVIGLFVASLPTVFKKRN
Ga0302242_10603952	3300028634	Activated Sludge	MDYKEMLKLIGIIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPTAFIKRN
Ga0302240_10607321	3300028638	Activated Sludge	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLSMSI
Ga0307344_1222441	3300028727	Anaerobic Digestor Sludge	MNYIEGLKIIGWIVIIIVCIAFLFIWYAAFCYVAYVLLGMIGITGLWQTICGIVIGLFVASLPTMFKKRN
Ga0307355_1060413	3300029673	Anaerobic Digestor Sludge	MDYKEMLKLIGIIALVVVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVIGLFVASLPTVFKKRN
Ga0134843_10077372	3300029775	Fermentation Pit Mud	MDYITALKTIGIIALVVVCIALLFIWYAAFCYIAYVLLGMIGITGFMQTVCGIVLGLFVASLPSVFARK
Ga0167330_10260612	3300029781	Biosolids	MDYKEMLKWIGIIALVIVCIALLIIWYAAFCYVAYVLIGMIGITGLWQTICGIVLGLFVASLPMSIGHYNKR
Ga0134854_100203917	3300029822	Fermentation Pit Mud	MNYIEGLKNVGLIAFIIVCIALLFIWYAAFCYVAYVLIGMIGITGLWQTICGIVIGLFVASLPMSIGHYNKR
Ga0134854_10175003	3300029822	Fermentation Pit Mud	MDYITALKIIGAIAVIIMCIALLIIWYAAFCYIAYVLLGMIGISGFMQTVCGIVFGIFVASLPSVSVRK
Ga0134835_10234441	3300029825	Fermentation Pit Mud	MDYITALKTIGAIAVIIMCIALLIIWYAAFCYIAYVLLGMIGITGFMQTVCGIVLGLFVASLPSVFARK
Ga0134835_10411103	3300029825	Fermentation Pit Mud	MDYISALKTIGIIALVVVCIALLFIWYAAFCYIAYVLLGMIGITGFMQTVCGIVLGIFVASLPSVSVRK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters