NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F101401

Metagenome Family F101401

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101401
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 65 residues
Representative Sequence MKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCGTCKRVEFFDLDLSLPVQP
Number of Associated Samples 83
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.76 %
% of genes near scaffold ends (potentially truncated) 24.51 %
% of genes from short scaffolds (< 2000 bps) 88.24 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.510 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.725 % of family members)
Environment Ontology (ENVO) Unclassified
(39.216 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.843 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.54%    β-sheet: 28.12%    Coil/Unstructured: 58.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF03544TonB_C 11.76
PF13620CarboxypepD_reg 7.84
PF12543DUF3738 7.84
PF00293NUDIX 5.88
PF13360PQQ_2 5.88
PF13570PQQ_3 3.92
PF01872RibD_C 3.92
PF00753Lactamase_B 3.92
PF01654Cyt_bd_oxida_I 1.96
PF11746DUF3303 0.98
PF01979Amidohydro_1 0.98
PF00583Acetyltransf_1 0.98
PF08332CaMKII_AD 0.98
PF00027cNMP_binding 0.98
PF13594Obsolete Pfam Family 0.98
PF02836Glyco_hydro_2_C 0.98
PF08450SGL 0.98
PF13808DDE_Tnp_1_assoc 0.98
PF14534DUF4440 0.98
PF13370Fer4_13 0.98
PF13249SQHop_cyclase_N 0.98
PF12867DinB_2 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 11.76
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 3.92
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 3.92
COG1271Cytochrome bd-type quinol oxidase, subunit 1Energy production and conversion [C] 1.96
COG3250Beta-galactosidase/beta-glucuronidaseCarbohydrate transport and metabolism [G] 0.98
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.98
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.98
COG4875Protein kinase association domain CaMKII_AD, NTF2-like superfamilyPosttranslational modification, protein turnover, chaperones [O] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.49 %
UnclassifiedrootN/A24.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_102848141All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1131Open in IMG/M
3300001431|F14TB_105336277Not Available577Open in IMG/M
3300004114|Ga0062593_103120929All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300004463|Ga0063356_100064178All Organisms → cellular organisms → Bacteria → Proteobacteria3781Open in IMG/M
3300004463|Ga0063356_105824943All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae528Open in IMG/M
3300005093|Ga0062594_100775597All Organisms → cellular organisms → Bacteria → Acidobacteria881Open in IMG/M
3300005175|Ga0066673_10042804All Organisms → cellular organisms → Bacteria2248Open in IMG/M
3300005177|Ga0066690_10178828All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1405Open in IMG/M
3300005184|Ga0066671_10764810Not Available620Open in IMG/M
3300005332|Ga0066388_100567413All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1762Open in IMG/M
3300005332|Ga0066388_101968944All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300005332|Ga0066388_102719929All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium903Open in IMG/M
3300005335|Ga0070666_10097228All Organisms → cellular organisms → Bacteria2027Open in IMG/M
3300005338|Ga0068868_100290395All Organisms → cellular organisms → Bacteria → Acidobacteria1386Open in IMG/M
3300005356|Ga0070674_101400159Not Available626Open in IMG/M
3300005364|Ga0070673_101448062All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300005438|Ga0070701_10857925All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300005441|Ga0070700_100054819All Organisms → cellular organisms → Bacteria2493Open in IMG/M
3300005441|Ga0070700_101130928All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300005444|Ga0070694_101062083All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300005518|Ga0070699_100215219All Organisms → cellular organisms → Bacteria1711Open in IMG/M
3300005518|Ga0070699_101256502Not Available679Open in IMG/M
3300005539|Ga0068853_101188422All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium736Open in IMG/M
3300005543|Ga0070672_100150977All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1922Open in IMG/M
3300005549|Ga0070704_101713375All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300005616|Ga0068852_100750496Not Available988Open in IMG/M
3300005617|Ga0068859_102766052All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300005618|Ga0068864_101224805All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300005836|Ga0074470_10697676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Abditibacteriota → unclassified Abditibacteriota → Abditibacteriota bacterium587Open in IMG/M
3300005836|Ga0074470_11128437All Organisms → cellular organisms → Bacteria → Proteobacteria680Open in IMG/M
3300005843|Ga0068860_100255927Not Available1706Open in IMG/M
3300006046|Ga0066652_100181497All Organisms → cellular organisms → Bacteria → Acidobacteria1795Open in IMG/M
3300006052|Ga0075029_100122392Not Available1580Open in IMG/M
3300006237|Ga0097621_100267516All Organisms → cellular organisms → Bacteria → Acidobacteria1501Open in IMG/M
3300006237|Ga0097621_101019606All Organisms → cellular organisms → Bacteria → Acidobacteria775Open in IMG/M
3300006852|Ga0075433_10095865All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2625Open in IMG/M
3300006871|Ga0075434_102639362All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → Ferroplasmaceae → Acidiplasma → unclassified Acidiplasma → Acidiplasma sp. MBA-1503Open in IMG/M
3300006881|Ga0068865_102221058All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300006914|Ga0075436_100852953Not Available680Open in IMG/M
3300007004|Ga0079218_10000201All Organisms → cellular organisms → Bacteria15266Open in IMG/M
3300009098|Ga0105245_12189114All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300009156|Ga0111538_11364970All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300009156|Ga0111538_13359476All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300009610|Ga0105340_1042808All Organisms → cellular organisms → Bacteria → Acidobacteria1764Open in IMG/M
3300010036|Ga0126305_10851648All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300010362|Ga0126377_10388541Not Available1403Open in IMG/M
3300011119|Ga0105246_12145707Not Available542Open in IMG/M
3300012212|Ga0150985_104720756Not Available593Open in IMG/M
3300012212|Ga0150985_107445770Not Available1056Open in IMG/M
3300012906|Ga0157295_10197899Not Available639Open in IMG/M
3300012916|Ga0157310_10423071All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012925|Ga0137419_10654030Not Available849Open in IMG/M
3300012955|Ga0164298_10232355All Organisms → cellular organisms → Bacteria → Acidobacteria1100Open in IMG/M
3300012957|Ga0164303_11107837Not Available572Open in IMG/M
3300012989|Ga0164305_10778131All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300013308|Ga0157375_13797510Not Available501Open in IMG/M
3300014325|Ga0163163_11107324All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300014326|Ga0157380_11026284Not Available860Open in IMG/M
3300014326|Ga0157380_11700135All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300014326|Ga0157380_11874870All Organisms → cellular organisms → Bacteria → Acidobacteria660Open in IMG/M
3300015371|Ga0132258_10580218All Organisms → cellular organisms → Bacteria2813Open in IMG/M
3300015374|Ga0132255_100700939All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1503Open in IMG/M
3300015374|Ga0132255_104252697All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300017965|Ga0190266_10016875All Organisms → cellular organisms → Bacteria → Acidobacteria2041Open in IMG/M
3300017988|Ga0181520_10893428All Organisms → cellular organisms → Bacteria → PVC group593Open in IMG/M
3300018476|Ga0190274_11137534All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae862Open in IMG/M
3300018476|Ga0190274_12400084Not Available624Open in IMG/M
3300018481|Ga0190271_10829093All Organisms → cellular organisms → Bacteria → Acidobacteria1049Open in IMG/M
3300021407|Ga0210383_10320605All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber1334Open in IMG/M
3300025315|Ga0207697_10135798Not Available1065Open in IMG/M
3300025315|Ga0207697_10232265All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300025893|Ga0207682_10060973All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1579Open in IMG/M
3300025899|Ga0207642_10046235All Organisms → cellular organisms → Bacteria → Acidobacteria1938Open in IMG/M
3300025903|Ga0207680_11315780All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300025908|Ga0207643_11101926Not Available512Open in IMG/M
3300025926|Ga0207659_11566171All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300025932|Ga0207690_10650330All Organisms → cellular organisms → Bacteria → Proteobacteria864Open in IMG/M
3300025960|Ga0207651_10641051All Organisms → cellular organisms → Bacteria → Acidobacteria932Open in IMG/M
3300025960|Ga0207651_10748735All Organisms → cellular organisms → Bacteria → Acidobacteria863Open in IMG/M
3300025986|Ga0207658_11978265Not Available531Open in IMG/M
3300026075|Ga0207708_11458801Not Available601Open in IMG/M
3300026088|Ga0207641_11174016Not Available767Open in IMG/M
3300026118|Ga0207675_101349432All Organisms → cellular organisms → Bacteria → Acidobacteria734Open in IMG/M
3300027533|Ga0208185_1115457All Organisms → cellular organisms → Bacteria → Acidobacteria627Open in IMG/M
3300027886|Ga0209486_10000464All Organisms → cellular organisms → Bacteria18210Open in IMG/M
3300028380|Ga0268265_11255676All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300028812|Ga0247825_10118264All Organisms → cellular organisms → Bacteria1803Open in IMG/M
3300028812|Ga0247825_11236978Not Available545Open in IMG/M
3300031366|Ga0307506_10077244All Organisms → cellular organisms → Bacteria → Acidobacteria1042Open in IMG/M
3300031366|Ga0307506_10187033All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300031538|Ga0310888_10266624All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300031543|Ga0318516_10586677All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300031740|Ga0307468_102193672All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300031854|Ga0310904_10273117All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300031858|Ga0310892_10480147All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300031901|Ga0307406_12094013Not Available507Open in IMG/M
3300031908|Ga0310900_10965302All Organisms → cellular organisms → Bacteria → Acidobacteria699Open in IMG/M
3300031939|Ga0308174_10030403All Organisms → cellular organisms → Bacteria3472Open in IMG/M
3300032144|Ga0315910_10079390All Organisms → cellular organisms → Bacteria → Acidobacteria2396Open in IMG/M
3300032144|Ga0315910_10890771All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300032144|Ga0315910_11640646All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300034268|Ga0372943_0021336All Organisms → cellular organisms → Bacteria3456Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.88%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.94%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.94%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.94%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.96%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.96%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.96%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.96%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.98%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.98%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.98%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.98%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.98%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.98%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10284814123300000956SoilVKCPACKSEMDSLGQLPIRVGGITGGWHLLLGGWADMREGIMPLDVYRCGTCKRVEFFDLDLSLPVQS*
F14TB_10533627723300001431SoilMECSGCKTEMQSLGQLPIRTGGIRGGWHLLLGEWADMTEGVVALDVFRCSQCKRVEFFDLDLSLPAR*
Ga0062593_10312092913300004114SoilVTCSVCNTAMQPLGQLPIRTGGIKGGWHLLLGEWADMTEGVIPLDVFRCSRCKRVEFFDLDLSLPER*
Ga0063356_10006417823300004463Arabidopsis Thaliana RhizosphereVTCSVCNTAMQPLGQLPIRTGGIKGGWHLLLGEWTDMTEGVIPLDVFRCSRCKRVEFFDLDLSLPER*
Ga0063356_10582494323300004463Arabidopsis Thaliana RhizosphereMKCPACKSEMESLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCATCKRVEFFDLDLSLPVQP*
Ga0062594_10077559723300005093SoilMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRVEFFDLDLSLPVQSS*
Ga0066673_1004280443300005175SoilMECSVCKREMQSLGQIPIRVGGIGGGWHLLLGEVADLTEGVFPLDVYRCTTCKRVEFFDVDLSLPEA*
Ga0066690_1017882833300005177SoilMECSVCQREMQSLGQIPIRVGGIGGGWHLLLGEVADLTEGVFPLDVYRCTTCKRVEFFDVDLSLPEA*
Ga0066671_1076481023300005184SoilMECSVCQREMQSLGQIPIRVGGIGGGWHLLLGEVADLTEGVFPLDVHRCTTCKRVEFFDVDLSLPEA*
Ga0066388_10056741323300005332Tropical Forest SoilMECPVCKTAMQSLGQLPIRTGGIRGGWHLLLGEWADMTEGVVPLDVFRCPQCKRIEFFDLDMSLPGR*
Ga0066388_10196894423300005332Tropical Forest SoilMNCPHCRVPMQALGEVPVRVGGTQGGWHLLFGEWADVTEGVWKLDVFRCATCKRVEFFDLDLSLPAS*
Ga0066388_10271992923300005332Tropical Forest SoilMQSLGQVPVRVGGTAGGWHLLLGEWADMTERVFPLDVYRCQRCKRVEFFDLDLSLPVRD*
Ga0070666_1009722813300005335Switchgrass RhizosphereKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRVEFFDLDLSLPVQSS*
Ga0068868_10029039523300005338Miscanthus RhizosphereVVTCSVCQIAMQSLGQIPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCSQCKRVEFFDLDLSLPER*
Ga0070674_10140015913300005356Miscanthus RhizosphereMTCPACKSEMDALGQLPIRVGGTTGGWHLVLGNWADMKESILPLDVYRCGTCKRVEFFDLDLSLPVQ*
Ga0070673_10144806223300005364Switchgrass RhizosphereCPACKSEMDSLGQLPIRVGGTTGGWHLILGNWADMHESILPLDVYRCGTCKRVEFFDLDLSLPARQ*
Ga0070701_1085792513300005438Corn, Switchgrass And Miscanthus RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRV
Ga0070700_10005481943300005441Corn, Switchgrass And Miscanthus RhizosphereATPDEDQPMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRVEFFDLDLSLPVQSS*
Ga0070700_10113092823300005441Corn, Switchgrass And Miscanthus RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCATCKRVEFF
Ga0070694_10106208323300005444Corn, Switchgrass And Miscanthus RhizosphereMTSLGQLPIRVGRTSGGRHLLIGNLADLSEGMVALDAYRCDTCKRVECFELDSSLPGQD*
Ga0070699_10021521953300005518Corn, Switchgrass And Miscanthus RhizosphereVQCSACKTPMESLGQVPVRVGGTSGPWHLLMGEWADMTERVFPLDVYRCQQCRRVELFDLDLSLPTR*
Ga0070699_10125650213300005518Corn, Switchgrass And Miscanthus RhizosphereMDCSVCKSPLQSLGQLPIRTGGIKGGWHLLLGEWADMTEGVVALDVFRCSQCKRVEFFDLDLSLPGR*
Ga0068853_10118842213300005539Corn RhizosphereMQPLGQLPIRTGGIKGGWHLLLGEWADMTEGVIPLDVFRCSRCKRVEFFDLDLSLPER*
Ga0070672_10015097723300005543Miscanthus RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGGWHLILGNWADMRESILPLDVYRCGTCKRVEFFDLDLSLPARQ*
Ga0070704_10171337513300005549Corn, Switchgrass And Miscanthus RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCGTCKRVEFFDLDLSLPVQP*
Ga0068852_10075049623300005616Corn RhizosphereRQRSVFRRAWVTCSVCNTAMQPLGQLPIRTGGIKGGWHLLLGEWADMTEGVIPLDVFRCSRCKRVEFFDLDLSLPER*
Ga0068859_10276605213300005617Switchgrass RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGGWHLILGNWADMRESILPLDVYRCGTCKRVEFFDLDLSLPVQGA*
Ga0068864_10122480523300005618Switchgrass RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKESVIPLDVYRCGTCKRVEFFDLDLSLPVQ*
Ga0074470_1069767623300005836Sediment (Intertidal)MDCAVCRKPMMSLGQLPIRVGGTTGPWHLLLGEFADLGERVMPLDVYRCAQCKRVEFFDL
Ga0074470_1112843713300005836Sediment (Intertidal)MKCGHCATEMQSLGQVPIRVGGTTGGWHLLLGSLADVSEGVFPLDVFRCERCKRVEFFDLDSSLPAR*
Ga0068860_10025592713300005843Switchgrass RhizosphereKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRVEFFDLDLSLPVQSS*
Ga0066652_10018149723300006046SoilMKCPACKSEMDSLGQLPIRVGGTTGVRHLFLGNWADLKESLLPLDVYRCGTCKRVEFFDLDLSLPVQRD*
Ga0075029_10012239213300006052WatershedsMNCSSCKTPMNSLGKLPIRVGGSSGGWHLLFGELADASEGVLPLDVYRCPSCKRVEFFDVEEKLATVS
Ga0097621_10026751623300006237Miscanthus RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADVKEQLLPLDVYRCGTCKRVEFFDLDLSLPVQGA*
Ga0097621_10101960623300006237Miscanthus RhizosphereMKCPTCKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKESVIPLDVYRCGTCKRVEFFDLDLSLPVQ*
Ga0075433_1009586533300006852Populus RhizosphereMECSACKTPMQSLGQLPIRTGGIRGGWHLLLGEWADMTEGVVPLDVFRCSQCKRVEFFDLDLSLPGR*
Ga0075434_10263936213300006871Populus RhizosphereMKCSSCNTTMLSLGQIPIRVGGTAGGWHLLLGEWADVTEGVFPLDVYRCPNCTRVEFFDLDQSLPAQ
Ga0068865_10222105823300006881Miscanthus RhizosphereMDSLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCGTCKRVEFFDLDLSLPALP*
Ga0075436_10085295313300006914Populus RhizosphereMECSACKTPMQSLGQLPIRTGGIRGGWHLLLGEWADMTEGVVPLDVFQCSQCKRVEFFDLDLSLPG
Ga0079218_1000020123300007004Agricultural SoilMKCPACKSEMDSLGQLPIRVGGITGGWHLLLGGWADMRENIMPLDVFRCGTCKRVEFFDLDLSLPVQQS*
Ga0105245_1218911413300009098Miscanthus RhizosphereMQSLGQIPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCSQCKRVEFFDLDLSLPER*
Ga0111538_1136497023300009156Populus RhizosphereMQPLGQLPIRTGGIKGGWHLLLGEWADMTEGIIPLDVFRCSRCKRVELFDLDLSLPER*
Ga0111538_1335947623300009156Populus RhizosphereMESLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCATCKRVEFFDLDLSLPVQP*
Ga0105340_104280823300009610SoilMDSLGQLPIRVGGTTGGWHLLLGGWADMHESIMPLDVYRCGTCKRVEFFDLDLSLPVQQ*
Ga0126305_1085164823300010036Serpentine SoilMESLGQLPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCAHCKRVEFFDLDLSLPQR*
Ga0126377_1038854143300010362Tropical Forest SoilMNCARCDIPMESLGQIPVRVGGTQGGWHLLFGEWADVSEGVWPLDVYRCATCKRVEFFDEDLSLPHE*
Ga0105246_1214570723300011119Miscanthus RhizosphereMQSLGQLPVRTGGIKGGWHLLLGEWADMTEGVIPLDVYRCSHCKRVEFFDLDLSLPGR*
Ga0150985_10472075613300012212Avena Fatua RhizosphereMESLGQLPIRTGGIKGGWHLLLGEWAEMTEGVVPLDVFRCSRCKRVEFFDLDLSLPER*
Ga0150985_10744577013300012212Avena Fatua RhizosphereMESLGQLPVRSGGIKGGWHLLLGEWADMTEGVVPLDVFRCAQCKRVEFFDLDLSLPQR*
Ga0157295_1019789913300012906SoilMDSLGQLPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCSRCKRIEFFDLDLSLPER*
Ga0157310_1042307123300012916SoilMQPLGQLPVRTGGIKGGWHLLLGEWADITEGVVPLDVFRCSTCKRVEFFDLDLSLPER*
Ga0137419_1065403023300012925Vadose Zone SoilMQSLGQIPIRVGGISGGWHLLLGDMADVTEGIFPLDVYRCERCKRVEFFDLDLSLPER*
Ga0164298_1023235523300012955SoilMQSLGQIPMRSGGSKGGWHLLLGEWADMTEGVVPLDVFRCSQCKRVEFFDLDLSLPER*
Ga0164303_1110783713300012957SoilMQSLGQIPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCSQCKRVEFFDLDESLPER*
Ga0164305_1077813123300012989SoilMQSLGQIPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCSQCKRVEFFDLDLSL
Ga0157375_1379751013300013308Miscanthus RhizosphereMTSLGQVPVRVGGTGGGWHLLLGEWADMGEKVWPLDVYRCGSCKRVEFFDLDLSLPQL*
Ga0163163_1110732423300014325Switchgrass RhizosphereMQSLGQVPVRVGGTQGPWHLLIGEWADMTERVFPLDVYRCQQCRRVELFDLDLSLPSQ*
Ga0157380_1102628423300014326Switchgrass RhizosphereSEMDSLGQLPIRVGGTTGGWHLILGNWADMHESILPLDVYRCGTCKRVEFFDLDLSLPARQ*
Ga0157380_1170013513300014326Switchgrass RhizosphereMDALGQLPIRVGGTTGGWHLVLGNWADMKESILPLDVYRCGTCKRVEFFDLDLSLPVQT*
Ga0157380_1187487023300014326Switchgrass RhizosphereMDSLGQLPIRVGGTTGGWHLILGNWADMRESILPLDVYRCGTCKRVEFFDLDLSLPVQGA
Ga0132258_1058021823300015371Arabidopsis RhizosphereMESLGQLPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCAHCKRVEFFDLDLSLPER*
Ga0132255_10070093923300015374Arabidopsis RhizosphereMQSLGQLPIRTGGIRGGWHLLLGEWADMTEGVVALDVFRCTQCKRVEFFDLDLSLPAR*
Ga0132255_10425269713300015374Arabidopsis RhizosphereSVPPWRVFVNCSACNTTMESLGQLPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCAHCKRVEFFDLDLSLPER*
Ga0190266_1001687523300017965SoilMKCPACKSEMDSLGQLPIRVGGTTGGWHLVLGNWADMRESILPLDVYRCGGCKRVEFFDMDLSLPVQP
Ga0181520_1089342823300017988BogTPSNPPKCLACQTQLQSIGQLPVRVGGSSGPWHLLLGEWADMSEGVLPLDAYRCPKCGRLEFYDHDFSLPNR
Ga0190274_1113753423300018476SoilMKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGNWADMRESILPLDVYRCGGCKRVEFFDMDLSLPVQR
Ga0190274_1240008423300018476SoilVKCPACKSEMDSLGQLPIRVRGTTGGWHLLLGNWADMRESIMPLDVYRCGTCKRVEFFDLDLSLPVQPRD
Ga0190271_1082909323300018481SoilMKCPACKSEMDSLGQLPIRVGGITGGWHLLLGGWADMRENIMPLDVFRCGTCKRVEFFDLDLSLPVQQ
Ga0210383_1032060523300021407SoilMISLGKVPIRVGGTFGGWHLLFGELADASEGLFPLDVYRCPQCKRVEFFDLEESLPPR
Ga0207697_1013579823300025315Corn, Switchgrass And Miscanthus RhizosphereVTCSVCNTAMQPLGQLPIRTGGIKGGWHLLLGEWADMTEGVIPLDVFRCSRCKRVEFFDLDLSLPER
Ga0207697_1023226523300025315Corn, Switchgrass And Miscanthus RhizosphereVVTCSVCQIAMQSLGQIPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCSQCKRVEFFDLDLSLPER
Ga0207682_1006097333300025893Miscanthus RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRVE
Ga0207642_1004623523300025899Miscanthus RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRVEFFDLDLSLPVQSS
Ga0207680_1131578023300025903Switchgrass RhizosphereMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRVEFFDLDLSLPVQSS
Ga0207643_1110192613300025908Miscanthus RhizosphereRLLVGAVALVIRRLLVKCRACLVEMTSLGQVPVRVGGTGGGWHLLLGEWADMGEKAWPLDVYRCGSCKRVEFFDLDLSLPQL
Ga0207659_1156617123300025926Miscanthus RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGGWHLVLGNWADMRESIMPLDVYRCGTCKRVEFFDLDLSLPAQP
Ga0207690_1065033023300025932Corn RhizosphereVTCSVCNTAMQPLGQLPIRTGGIKGGWHLLLGEWTDMTEGVIPLDVFRCSRCKRVEFFDLDLSLPER
Ga0207651_1064105123300025960Switchgrass RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKESVIPLDVYRCGTCKRVEFFDL
Ga0207651_1074873523300025960Switchgrass RhizosphereYEDQPMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKEGLLPLDVYRCGTCKRVEFFDLDLSLPVQSS
Ga0207658_1197826523300025986Switchgrass RhizosphereDQPMKCPACKSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKESVIPLDVYRCGTCKRVEFFDLDLSLPVQ
Ga0207708_1145880113300026075Corn, Switchgrass And Miscanthus RhizosphereMKCLACKSEMDSLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCGTCKRVEFFDMDLSLPM
Ga0207641_1117401613300026088Switchgrass RhizosphereVNCSTCATPMQSLGQLPIRTGGIKGGWHLLLGEWADMTEGLIPLDVYRCSHCKRVEFFDLDLSLPER
Ga0207675_10134943223300026118Switchgrass RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGGWHLILGNWADMHESILPLDVYRCGTCKRVEFFDLDLSLPARQ
Ga0208185_111545713300027533SoilVKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGGWADMHESIMPLDVYRCGTCKRVEFFDLDLSLPVQQ
Ga0209486_10000464133300027886Agricultural SoilMKCPACKSEMDSLGQLPIRVGGITGGWHLLLGGWADMRENIMPLDVFRCGTCKRVEFFDLDLSLPVQQS
Ga0268265_1125567613300028380Switchgrass RhizosphereMKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCGTCKRVEFFDLDLSLPVQP
Ga0247825_1011826413300028812SoilVNCSVCKTAMDSLGQLPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCSRCKRIEFFDLDLSLPER
Ga0247825_1123697813300028812SoilVTCSVCSTTMESLGQLPIRTGGIKGGWHLLLGEWADMTEGVVPLDVFRCAQCKRVELFDLDLSLPER
Ga0307506_1007724423300031366SoilMKCPACQSEMDSLGQLPIRVGGTTGVRHLLLGNWADLKESILPLDVYRCGTCKRVEFFDLDLSLPVQS
Ga0307506_1018703323300031366SoilMVKCRACEVEMTSLGQVPVRVGGTGGGWHLLLGELADMGEKVWPLDVYRCSSCKRVEFFDLDL
Ga0310888_1026662423300031538SoilMKCPACKSEMESLGQLPIRVGGTTGGWHLLLGNWADMRESILPLDVFRCGTCKRVEFFDMDLSLPVQP
Ga0318516_1058667723300031543SoilMESLGQVPVRVGGIKGGWHLLLGEWADMTEGVLPLDVYRCRNCRRGGRFDQHLSLPNS
Ga0307468_10219367223300031740Hardwood Forest SoilMKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGNWADMRESILPLDVYRCGTCKRVEFFDLDLSLPVQGA
Ga0310904_1027311723300031854SoilMTSLGQLPIGGGGTSGGWHLLFGNLADLSEGMVALDAYRCDTCKRVEFFDLDSSLPAQD
Ga0310892_1048014723300031858SoilMKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGNWADMRESILPLDVFRCGTCKRVEFFDMDLSLPVQP
Ga0307406_1209401313300031901RhizosphereMECSACEIPMQSLGRIPIRTGGTAGGWHLFLGELADMGEDTLPLDVYRCRRCRRVELFDLDMSLPER
Ga0310900_1096530223300031908SoilMKCPACKSEMDSLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCPTCKRVEFFDLDLSLPVQT
Ga0308174_1003040323300031939SoilMNCSACNTAMESLGQLPIRIGGIKGGWHLLLGEWADMTEGVVPLDVFRCSTCKRVEFFDLDLSLPEP
Ga0315910_1007939023300032144SoilMKCPACRTEMESLGQLPIRVGGTTGGWHLLLGNWADMRESIMPLDVFRCGTCKRVEFFDMDLSLPVQP
Ga0315910_1089077123300032144SoilMKCPACKTEMESLGQLPIRVGGTTGGWHLLLGNWADMRESILPLDVYRCGTCKRVEFFDMDLSLPVQA
Ga0315910_1164064623300032144SoilMKCPACKSEMESLGQLPIRVGGTTGGWHLLLGNFADMRESILPLDVYRCATCKRVEFFDLDLSLPVQP
Ga0372943_0021336_2755_29313300034268SoilMRALGQIPIRTGGTTGGWHLLLGEWADMTEGVLPLDVYRCDTCTRVEFFDLDLSLPSR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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