NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F101367

Metagenome / Metatranscriptome Family F101367

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F101367
Family Type Metagenome / Metatranscriptome
Number of Sequences 102
Average Sequence Length 68 residues
Representative Sequence MLNWIRSTWCRSMHNEAMWPMHGKYICPRCLREYPVAWEGPATAAEYADVSLRHAPETVSYAAQQRLC
Number of Associated Samples 80
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.55 %
% of genes near scaffold ends (potentially truncated) 27.45 %
% of genes from short scaffolds (< 2000 bps) 96.08 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.020 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(10.784 % of family members)
Environment Ontology (ENVO) Unclassified
(40.196 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.922 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.08%    β-sheet: 6.25%    Coil/Unstructured: 66.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF00440TetR_N 32.35
PF01261AP_endonuc_2 23.53
PF02321OEP 1.96
PF01522Polysacc_deac_1 0.98
PF13432TPR_16 0.98
PF13603tRNA-synt_1_2 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 3.92
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.98

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.02 %
UnclassifiedrootN/A0.98 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459022|GZEQPF102JIMLJAll Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus505Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105174378All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia811Open in IMG/M
3300002549|JGI24130J36418_10084580All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus747Open in IMG/M
3300002568|C688J35102_119259192All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus663Open in IMG/M
3300002568|C688J35102_120541857All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1161Open in IMG/M
3300005330|Ga0070690_101249803All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter594Open in IMG/M
3300005333|Ga0070677_10896904All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter512Open in IMG/M
3300005335|Ga0070666_10202932All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300005335|Ga0070666_10971591All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300005338|Ga0068868_101069851All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300005355|Ga0070671_101633869All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter571Open in IMG/M
3300005364|Ga0070673_102198228All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300005367|Ga0070667_100569337All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300005439|Ga0070711_100998832All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300005459|Ga0068867_102115598All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter533Open in IMG/M
3300005466|Ga0070685_11309818All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300005466|Ga0070685_11356786All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter544Open in IMG/M
3300005535|Ga0070684_100207660All Organisms → cellular organisms → Bacteria1785Open in IMG/M
3300005543|Ga0070672_101896459All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300005548|Ga0070665_100323797All Organisms → cellular organisms → Bacteria1546Open in IMG/M
3300005617|Ga0068859_101145549All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300005618|Ga0068864_101608507All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300005841|Ga0068863_102577816All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300005938|Ga0066795_10054800All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300005938|Ga0066795_10086337All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300006059|Ga0075017_101463142All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter538Open in IMG/M
3300006162|Ga0075030_100186195All Organisms → cellular organisms → Bacteria1674Open in IMG/M
3300006237|Ga0097621_102271860All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter519Open in IMG/M
3300006358|Ga0068871_100839072All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia849Open in IMG/M
3300006358|Ga0068871_102094390All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter539Open in IMG/M
3300006579|Ga0074054_11321987All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter604Open in IMG/M
3300006795|Ga0075520_1043814All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2174Open in IMG/M
3300006864|Ga0066797_1190409All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia716Open in IMG/M
3300009029|Ga0066793_10193914All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1183Open in IMG/M
3300009029|Ga0066793_10246826All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300009029|Ga0066793_10888775All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter504Open in IMG/M
3300009176|Ga0105242_10352669All Organisms → cellular organisms → Bacteria1359Open in IMG/M
3300009176|Ga0105242_10561052All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1097Open in IMG/M
3300009177|Ga0105248_10304614All Organisms → cellular organisms → Bacteria → Acidobacteria1794Open in IMG/M
3300009177|Ga0105248_12724048All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300009548|Ga0116107_1083560All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300010147|Ga0126319_1081385All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300010362|Ga0126377_12881765All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300010375|Ga0105239_13211302All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter532Open in IMG/M
3300010397|Ga0134124_10143885All Organisms → cellular organisms → Bacteria2120Open in IMG/M
3300012212|Ga0150985_102109430All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300012212|Ga0150985_103195832All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300012212|Ga0150985_108635399All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300012212|Ga0150985_109949419All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300012212|Ga0150985_110088694All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300012212|Ga0150985_112934460All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter620Open in IMG/M
3300012212|Ga0150985_115411153All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300012212|Ga0150985_122845487All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter502Open in IMG/M
3300012350|Ga0137372_10704972All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter731Open in IMG/M
3300012469|Ga0150984_110468944All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter534Open in IMG/M
3300012469|Ga0150984_114593974All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter515Open in IMG/M
3300012960|Ga0164301_11586787All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter542Open in IMG/M
3300013297|Ga0157378_10743581All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300013297|Ga0157378_11454395All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia729Open in IMG/M
3300013306|Ga0163162_11942473All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300014325|Ga0163163_10349121All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1535Open in IMG/M
3300014498|Ga0182019_10900405All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter638Open in IMG/M
3300014969|Ga0157376_11300867All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300015373|Ga0132257_101668179All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus816Open in IMG/M
3300016270|Ga0182036_10595714All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus886Open in IMG/M
3300016445|Ga0182038_11277711All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia656Open in IMG/M
3300018019|Ga0187874_10099488All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1269Open in IMG/M
3300018081|Ga0184625_10261708All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus905Open in IMG/M
3300019788|Ga0182028_1524178All Organisms → cellular organisms → Bacteria1500Open in IMG/M
3300021861|Ga0213853_10545354All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300025495|Ga0207932_1009560Not Available2960Open in IMG/M
3300025903|Ga0207680_11321723All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300025914|Ga0207671_11174300All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia601Open in IMG/M
3300025925|Ga0207650_10585474All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300025925|Ga0207650_11766826All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter523Open in IMG/M
3300025931|Ga0207644_10311914All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1270Open in IMG/M
3300025934|Ga0207686_10483677All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia958Open in IMG/M
3300025934|Ga0207686_11074246All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia655Open in IMG/M
3300025939|Ga0207665_10312528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601177Open in IMG/M
3300025942|Ga0207689_10938047All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300025960|Ga0207651_10329697All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300026088|Ga0207641_12210404All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter550Open in IMG/M
3300026121|Ga0207683_11435419All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300026551|Ga0209648_10339045All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1044Open in IMG/M
3300027898|Ga0209067_10495544All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300027911|Ga0209698_10154961All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1877Open in IMG/M
3300030002|Ga0311350_11503233All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia598Open in IMG/M
3300030905|Ga0308200_1161543All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300031057|Ga0170834_109537126All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia934Open in IMG/M
3300031231|Ga0170824_109384272All Organisms → cellular organisms → Bacteria → Acidobacteria779Open in IMG/M
3300031232|Ga0302323_100209347All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1975Open in IMG/M
3300031726|Ga0302321_102020567All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter670Open in IMG/M
3300031938|Ga0308175_100557131All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300031938|Ga0308175_102294320All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter605Open in IMG/M
3300031939|Ga0308174_10567480All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300032074|Ga0308173_10328822All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1324Open in IMG/M
3300033289|Ga0310914_11038274All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter720Open in IMG/M
3300033475|Ga0310811_10145088All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2996Open in IMG/M
3300034170|Ga0370487_0353121All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300034643|Ga0370545_055353All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300034643|Ga0370545_167063All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300034681|Ga0370546_066089All Organisms → cellular organisms → Bacteria584Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere10.78%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere7.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.88%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.92%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.94%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil2.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.94%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.96%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen1.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.96%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.98%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.98%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.98%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.98%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.98%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.98%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.98%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.98%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.98%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459022Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition)EnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002549Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300006864Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009548Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018019Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300019788Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025495Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300030002II_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300034170Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034681Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FA2_000783702170459022Grass SoilMLNWIRSTWCRSMHNEAMWPMHGKYICPRCLREYPVAWEGPATAAEYADVSLRHAPETVSYAAQQRLC
INPhiseqgaiiFebDRAFT_10517437813300000364SoilMLNWIRSTWCKSMHTETMWPMHGXYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC*
JGI24130J36418_1008458013300002549Arctic Peat SoilMVNWIRTTWCKSLHNEAMWPMHGKYICPRCLCEYPVPWEGPATAAEYADVSLRHAPETVAYAAEQRLA*
C688J35102_11925919223300002568SoilMIMLNWIRSTWCKSMHNEAMWPMHGKYICPRCLREYPVTWEGPATAAEYADVSLRHAPEAPAYVTEQRLSA*
C688J35102_12054185723300002568SoilMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEATHYAAQERLC*
Ga0070690_10124980323300005330Switchgrass RhizosphereMLNWIRTTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEATNYAAQERLC*
Ga0070677_1089690413300005333Miscanthus RhizosphereMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHTPEAVSYRAQQHIA*
Ga0070666_1020293223300005335Switchgrass RhizosphereMINWIRNTWCKQMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHSPEAVSYRAQQHIA*
Ga0070666_1097159123300005335Switchgrass RhizosphereMIDWIRTTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVAYNAQQHIA*
Ga0068868_10106985123300005338Miscanthus RhizosphereMLNWIRTTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC*
Ga0070671_10163386923300005355Switchgrass RhizosphereMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEATNYAAQERLC*
Ga0070673_10219822813300005364Switchgrass RhizosphereVSLEAQLLRVLERRLDMINWIRTTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVAYNAQQHIA*
Ga0070667_10056933713300005367Switchgrass RhizosphereWIRTTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVAYNAQQHIA*
Ga0070711_10099883223300005439Corn, Switchgrass And Miscanthus RhizosphereMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC*
Ga0068867_10211559813300005459Miscanthus RhizosphereMINWIRTTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVGYNAQQHIA*
Ga0070685_1130981813300005466Switchgrass RhizosphereMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEATNYAAQERLC*
Ga0070685_1135678613300005466Switchgrass RhizosphereMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC*
Ga0070684_10020766033300005535Corn RhizosphereMLNWIRSAWCKSMHNEAMWPMHGKYICPRCLREYPVAWEGPATVAEYADASLRHAPEAPAYATEQRLSA*
Ga0070672_10189645923300005543Miscanthus RhizosphereWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEATNYAAQERLC*
Ga0070665_10032379723300005548Switchgrass RhizosphereMMNWIRTTWCRSMHDGAMWPIKGKYICRRCLREYPVAWEGPATAADYADVSLRHAPETVSYNAQQRTA*
Ga0068859_10114554913300005617Switchgrass RhizosphereMINWIRTTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVAYNAQQHIA*
Ga0068864_10160850713300005618Switchgrass RhizosphereMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHSPETVSYGAQHIA*
Ga0068863_10257781613300005841Switchgrass RhizosphereWIRNTWCKQMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHSPEAVSYRAQQHIA*
Ga0066795_1005480013300005938SoilMVNWIRSTWCKSMHNEAMWPMHGKYICPRCLCEYPVPWESPAAAAVYAGVSLSHAPETIPYAAEHRLA*
Ga0066795_1008633723300005938SoilMVNWIRSTWCKSLHNEAMWPMHGKYICPRCLCEYPVPWEGPATAAEYADVSLRHAPETVAYAAEQRLA*
Ga0075017_10146314213300006059WatershedsMMNWIRSTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEGPASASEYADVSLRHAPETVHYAAQQHTA*
Ga0075030_10018619533300006162WatershedsMLNWIRSTWCKNMHTEAMWPMHGKYICPRCLSEYPVAWEAPATAAEYADDSLRHAPNRVPYAARQRLC*
Ga0097621_10227186013300006237Miscanthus RhizosphereMIDWIRTTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEAPVTAADYADLSLRHTPEAVSYNAQHHIA*
Ga0068871_10083907213300006358Miscanthus RhizosphereMLNWIRSTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEGPVTAAEYADVSLRHAPEATAAYTAEQRLSA*
Ga0068871_10209439023300006358Miscanthus RhizosphereMINWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHSPEAVSYRAQQHIA*
Ga0074054_1132198723300006579SoilMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATIAEYADVSLRHAPEAAHYAAQERLC*
Ga0075520_104381433300006795Arctic Peat SoilMNWIRSTWCKNMHTEAMWPIHGKYICPRCLREYPVAWEGPATMAEYSDVSLRHAPETVPYAAEQRLA*
Ga0066797_119040913300006864SoilMVNWIRSTWCKSMHNEAMWPMHGKYICRRCLCEHPVPWGSPAAAAEYADVSLAHAPETVA
Ga0066793_1019391423300009029Prmafrost SoilMNWIRSTWCKSVHTEAMWPMHGKYICPRCLREYPVAWEGPATAAEYADVSLRHAPEAVSYAAQQHLA*
Ga0066793_1024682613300009029Prmafrost SoilIEVMLNWIRSTWCKSLHNEAMWPMHGKYICPRCLCEFPVPWEDPATVTAYADVSLRHAPEAYAAEQRLC*
Ga0066793_1088877513300009029Prmafrost SoilMLNWIRSTWCKSMHNEAMWPMHGEYICPRCLCEYPVPWESPAAAAEYAGVSLRHAPETIPYAAEHRLA*
Ga0105242_1035266923300009176Miscanthus RhizosphereMLHWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC*
Ga0105242_1056105213300009176Miscanthus RhizosphereMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVAYNAQQHIA*
Ga0105248_1030461433300009177Switchgrass RhizosphereTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEATNYAAQERLC*
Ga0105248_1272404823300009177Switchgrass RhizosphereMHNEAMWPMHGKYICPRCLREYPVAWEAPVTAADYADLSLRHTPEAVSYNAQHHIA*
Ga0116107_108356023300009548PeatlandMMNWIRATWCKNMHTEAMWPMHGKYICPRCLRECPVTWEGPATAAEYADVSLRHAPETVSYAAQQRLA*
Ga0126319_108138513300010147SoilMINWIRTTWCKQMHNEAMWPMHGKYICPRCLQEYPVAWEAPVTAADYADVSLRHTPETVSYNAQHHIA*
Ga0126377_1288176523300010362Tropical Forest SoilMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEASHYAAQERLC*
Ga0105239_1321130223300010375Corn RhizosphereMLNWIRSTWCKSMHTETMWSMHGKYICLRCLREYFVAWEGPATVAEYVDVSLRHAPEAAHYAAQERLC*
Ga0134124_1014388523300010397Terrestrial SoilMLNWIRSTWCKSMHTETMWPMHGKYICLRCLREYFVAWEGPATVAEYADVSLRHAPEATNYAAQERLC*
Ga0150985_10210943023300012212Avena Fatua RhizosphereMINWIRTTWCKRMHNEAMWPMHGKYICPRCLQEYPVAWEVPVTAADYADVSLRHTPETVSYNAQHHIA*
Ga0150985_10319583213300012212Avena Fatua RhizosphereLTRSFYALLERRLDFMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHTPEAVSYNAQQHIA*
Ga0150985_10863539923300012212Avena Fatua RhizosphereMINWIRTTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPETVSYSAQQHIA*
Ga0150985_10994941913300012212Avena Fatua RhizosphereMINWIRTTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEVPAAASDYADVSLRHNQEAVTYNAQQHVV*
Ga0150985_11008869413300012212Avena Fatua RhizosphereMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHTPEAVSYNAQHHIA*
Ga0150985_11293446013300012212Avena Fatua RhizosphereVVAVSFKSVLRVYQRRKKIMMNWIRTTWCKSIHNGAMWPINGKYICPRCLREYPVAWEGPATAADYADVSLRHTPEAVSYSAQQRTA*
Ga0150985_11541115313300012212Avena Fatua RhizosphereMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHTPEAVSYGAQQHIA*
Ga0150985_12284548713300012212Avena Fatua RhizosphereMINWIRSAWCKNMHTEAMWPMHGKYICPRCLREYPVAWEGPATAAEYADASLRHTPETVSYATQHRTA*
Ga0137372_1070497223300012350Vadose Zone SoilMINWIRSTWCKNMHTEAMWPMHGKYICPRCLREYPVAWEGPATAAEYADASLRHTPETVTYAAHQHTA*
Ga0150984_11046894413300012469Avena Fatua RhizosphereRVLRVYQRRKKIMMNWIRTTWCKSIHNGAMWPINGKYICPRCLREYPVAWEGPATAADYADVSLRHTPEAVSYSAQQRTA*
Ga0150984_11459397413300012469Avena Fatua RhizosphereIKVAISLDAYLLRVLERRLERMINWIRTTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPETVSYSAQQHIA*
Ga0164301_1158678713300012960SoilMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGLATVAEYVDVSLRHAPE
Ga0157378_1074358113300013297Miscanthus RhizosphereMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVSYNAQHHIA*
Ga0157378_1145439523300013297Miscanthus RhizosphereMMNWIRSTWCKNMHTEVMWPMHGKYICPRCLREYPVAWEGPATANEYADASLRHTPETVSYAAQHRTA*
Ga0163162_1194247323300013306Switchgrass RhizosphereNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC*
Ga0163163_1034912113300014325Switchgrass RhizosphereMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHSPEAVSYRAQQHIA*
Ga0182019_1090040523300014498FenMNWIRSTWCKNMHNEAMWPIHGKYICSRCLREYPVAWEGPATVAEYADVSLRHAPETVPYAAQQRLA*
Ga0157376_1130086713300014969Miscanthus RhizosphereGSIMINWLRNTWCKQMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHSPEAVSYRAQQHIA*
Ga0132257_10166817923300015373Arabidopsis RhizosphereMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAPYAAQERLC*
Ga0182036_1059571423300016270SoilMLNWIRSTWCRSMHTQTMWPMHGKYICTRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC
Ga0182038_1127771113300016445SoilMLNWIRSTWCKSMHSEAMWPMHGKYTCPRCLRQYPVTWEGPATAADYADVSLRHAPEAVTYSAEQRLC
Ga0187874_1009948823300018019PeatlandMMNWIRATWCKNMHTEAMWPMHGKYICPRCLRECPVTWEGPATAAEYADVSLRHAPETVSYAAQQRLA
Ga0184625_1026170823300018081Groundwater SedimentMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC
Ga0182028_152417813300019788FenMMNWIRATWCKNMHTEAMWPMHGKYICPRCLREYPVTWEGPATVAEYADVSLRHAPETVPYAAQQHLA
Ga0213853_1054535423300021861WatershedsVRVMLNWIRSTWCKSMHNEAMWPMHGKYICPRCLREYPVSWEGPATASEYADVSLRHAPVTVPYAAEQRLC
Ga0207932_100956023300025495Arctic Peat SoilMVNWIRTTWCKSLHNEAMWPMHGKYICSRCLCEHPVAWEGAATAAEYADVSLRHAPETVPYAAEQRLA
Ga0207680_1132172323300025903Switchgrass RhizosphereCSVRGLLVFARVSLEAQLLRVLERRLDMIDWIRTTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVAYNAQQHIA
Ga0207671_1117430013300025914Corn RhizosphereMLNWIRSAWCKSMHNEAMWPMHGKYICPRCLREYPVAWEGPATVAEYADASLRHAPEAPAYATE
Ga0207650_1058547413300025925Switchgrass RhizosphereMINWIRTTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVAYNAQQHIA
Ga0207650_1176682623300025925Switchgrass RhizosphereMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHSPEAVSYRAQQHIA
Ga0207644_1031191423300025931Switchgrass RhizosphereMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEATNYAAQERLC
Ga0207686_1048367723300025934Miscanthus RhizosphereMLHWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC
Ga0207686_1107424623300025934Miscanthus RhizosphereMIDWIRTTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPETVSYAAQQRLA
Ga0207665_1031252813300025939Corn, Switchgrass And Miscanthus RhizosphereMLNWIRSTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEGPVTAAEYADVSLRHAPETAAAYT
Ga0207689_1093804723300025942Miscanthus RhizosphereMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHSPETVSYGAQHIA
Ga0207651_1032969713300025960Switchgrass RhizosphereAMVSLEAQLLRVLERRLDMINWIRTTWCKSMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPEAVAYNAQQHIA
Ga0207641_1221040413300026088Switchgrass RhizosphereMINWIRNTWCKQMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHSPEAVSYRAQQHIA
Ga0207683_1143541923300026121Miscanthus RhizosphereGGEDFMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHTPEAVSYNAQQHIA
Ga0209648_1033904523300026551Grasslands SoilMLNWIRSTWCKSMHTEAMWPMHGKYICARCLREYPVAWEGPATAAEYADVSLRHAPETVTYAAEQRLC
Ga0209067_1049554423300027898WatershedsNMHTEAMWPMHGKYICPRCLSEYPVAWEAPATAAEYADDSLRHAPNRVPYAARQRLC
Ga0209698_1015496123300027911WatershedsMLNWIRSTWCKNMHTEAMWPMHGKYICPRCLSEYPVAWEAPATAAEYADDSLRHAPNRVPYAARQRLC
Ga0311350_1150323313300030002FenMKNWIRSTWCKSMHNEAMWPMHGKYICPRCLLEFPVPWEAPGISPDYADVTLRPASETAT
Ga0308200_116154323300030905SoilVRSMIDWIRTTWCKQMHTEAMWPMHGKYICPRCLREYPVAWEVPVTAADYADVSLRHTPETASYNAQQHIA
Ga0170834_10953712623300031057Forest SoilMLNWIRSTWCKSMHTEAMWPMHGKYTCARCLREYPVKWEGPATAAEYADVSLRHAPETVTYAAEQRLC
Ga0170824_10938427223300031231Forest SoilMLNWIRSTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEGPATAAEYADVSLRHAPEAPAYVTEQRLSA
Ga0302323_10020934723300031232FenMHNEAMWPIHGKYICPRCLREYPVTWEAPVTAADYADVSLRHNPEAAVYNAQHHIA
Ga0302321_10202056723300031726FenMLNRIRSTWCKSMHNEAMWPIHGKYICPRCLREYPVTWEAPVTAADYADVSLRHNPEAAVYNAQHHIA
Ga0308175_10055713123300031938SoilMMNWIRTTWCRSMHDGAMWPIKGKYICRRCLREYPVAWEGPATAADYADVSLRHAPETVSYNAQQRTA
Ga0308175_10229432023300031938SoilMMNWIRTTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHTPETVSYNAQQHIA
Ga0308174_1056748013300031939SoilMINWIRTTWCKSMHNEAMWPMHGKYICPRCLREYPVAWEVPAAASDYADVSLRHNQEAVTYNAQQHVV
Ga0308173_1032882233300032074SoilMINWIRTTWCKRMHNEAMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEATHYAAQERLC
Ga0310914_1103827423300033289SoilMLNWIRSTWCKSMHSEAMWPMHGKYTCPRCLRQYPVTWEGPATAADYADVSLRHAPEAVAYSAEQRLC
Ga0310811_1014508843300033475SoilMLNWIRSAWCKSMHNEAMWPMHGKYICPRCLREYPVAWEGPATVAEYADASLRHAPEAPAYATEQRLSA
Ga0370487_0353121_259_4653300034170Untreated Peat SoilMMNWIRSTWCKSMHTEAMWPMHGKYICARCLREYPVAWEVPATGTEYADVSLRHVPEAVSYASERRLA
Ga0370545_055353_1_1953300034643SoilIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAAHYAAQERLC
Ga0370545_167063_237_4433300034643SoilMIDWIRSTWCKQMHNEAMWPMHGKYICPRCLREYPVAWEMPVTAADYADVSLRHTPEAVSYNAQHHIA
Ga0370546_066089_375_5843300034681SoilFMLNWIRSTWCKSMHTETMWPMHGKYICPRCLREYPVAWEGPATVAEYADVSLRHAPEAPHYAAQERLC

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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