NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F101363

Metagenome Family F101363

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F101363
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 127 residues
Representative Sequence MILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVGR
Number of Associated Samples 89
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 59.80 %
% of genes near scaffold ends (potentially truncated) 31.37 %
% of genes from short scaffolds (< 2000 bps) 87.25 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.020 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.725 % of family members)
Environment Ontology (ENVO) Unclassified
(40.196 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.922 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 16.13%    β-sheet: 25.16%    Coil/Unstructured: 58.71%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.221.1.1: Nuclease A inhibitor (NuiA)d2o3bb22o3b0.56
e.3.1.0: beta-lactamase/transpeptidase-liked6i1ha16i1h0.54
d.107.1.3: Mog1p/PsbP-liked1tu1a11tu10.53
e.3.1.0: beta-lactamase/transpeptidase-liked4ztka_4ztk0.53
e.3.1.1: beta-lactamase/transpeptidase-liked1pyya41pyy0.52

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF12838Fer4_7 20.59
PF00037Fer4 12.75
PF01058Oxidored_q6 12.75
PF01103Omp85 0.98
PF08712Nfu_N 0.98
PF12800Fer4_4 0.98
PF13650Asp_protease_2 0.98
PF01933CofD 0.98
PF13975gag-asp_proteas 0.98
PF02518HATPase_c 0.98
PF13534Fer4_17 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0377NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductaseEnergy production and conversion [C] 12.75
COG1740Ni,Fe-hydrogenase I small subunitEnergy production and conversion [C] 12.75
COG1941Coenzyme F420-reducing hydrogenase, gamma subunitEnergy production and conversion [C] 12.75
COG3260Ni,Fe-hydrogenase III small subunitEnergy production and conversion [C] 12.75
COG0391Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 familyCarbohydrate transport and metabolism [G] 0.98

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.02 %
UnclassifiedrootN/A0.98 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_111554268All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300004114|Ga0062593_100599799All Organisms → cellular organisms → Bacteria → Acidobacteria1050Open in IMG/M
3300004114|Ga0062593_102034515All Organisms → cellular organisms → Bacteria → Acidobacteria639Open in IMG/M
3300004157|Ga0062590_100217603All Organisms → cellular organisms → Bacteria → Acidobacteria1401Open in IMG/M
3300004157|Ga0062590_101970467All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300004463|Ga0063356_103509536All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300004643|Ga0062591_100392369All Organisms → cellular organisms → Bacteria1143Open in IMG/M
3300005175|Ga0066673_10068197All Organisms → cellular organisms → Bacteria1840Open in IMG/M
3300005187|Ga0066675_10518829All Organisms → cellular organisms → Bacteria → Acidobacteria892Open in IMG/M
3300005293|Ga0065715_10027615All Organisms → cellular organisms → Bacteria → Acidobacteria1860Open in IMG/M
3300005333|Ga0070677_10603250All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300005338|Ga0068868_100610173All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae968Open in IMG/M
3300005341|Ga0070691_10986433All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia525Open in IMG/M
3300005353|Ga0070669_101264716All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300005356|Ga0070674_100054771All Organisms → cellular organisms → Bacteria2759Open in IMG/M
3300005364|Ga0070673_100001066All Organisms → cellular organisms → Bacteria15656Open in IMG/M
3300005438|Ga0070701_11086883All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300005440|Ga0070705_100200829All Organisms → cellular organisms → Bacteria → Acidobacteria1367Open in IMG/M
3300005468|Ga0070707_100074705All Organisms → cellular organisms → Bacteria → Acidobacteria3269Open in IMG/M
3300005468|Ga0070707_102109803All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300005526|Ga0073909_10076127All Organisms → cellular organisms → Bacteria → Acidobacteria1279Open in IMG/M
3300005536|Ga0070697_100976216All Organisms → cellular organisms → Bacteria → Acidobacteria753Open in IMG/M
3300005543|Ga0070672_101824540All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300005544|Ga0070686_101366694All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300005545|Ga0070695_100646236All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300005548|Ga0070665_101792143All Organisms → cellular organisms → Bacteria → Acidobacteria620Open in IMG/M
3300005552|Ga0066701_10391423All Organisms → cellular organisms → Bacteria → Acidobacteria860Open in IMG/M
3300005559|Ga0066700_10540099All Organisms → cellular organisms → Bacteria → Acidobacteria813Open in IMG/M
3300005561|Ga0066699_10291047All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300005578|Ga0068854_100039458All Organisms → cellular organisms → Bacteria3327Open in IMG/M
3300005615|Ga0070702_101328132All Organisms → cellular organisms → Bacteria → Acidobacteria585Open in IMG/M
3300005719|Ga0068861_100751336All Organisms → cellular organisms → Bacteria → Acidobacteria911Open in IMG/M
3300005843|Ga0068860_100769020All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae975Open in IMG/M
3300005844|Ga0068862_101414823All Organisms → cellular organisms → Bacteria → Acidobacteria699Open in IMG/M
3300005844|Ga0068862_101741106All Organisms → cellular organisms → Bacteria → Acidobacteria632Open in IMG/M
3300006237|Ga0097621_102346636All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300006796|Ga0066665_10794078All Organisms → cellular organisms → Bacteria → Acidobacteria747Open in IMG/M
3300006797|Ga0066659_11859484All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300006852|Ga0075433_10460004All Organisms → cellular organisms → Bacteria → Acidobacteria1121Open in IMG/M
3300009012|Ga0066710_100372125All Organisms → cellular organisms → Bacteria → Acidobacteria2120Open in IMG/M
3300009012|Ga0066710_101086125All Organisms → cellular organisms → Bacteria → Acidobacteria1237Open in IMG/M
3300009098|Ga0105245_10352131All Organisms → cellular organisms → Bacteria → Acidobacteria1459Open in IMG/M
3300009137|Ga0066709_100967523All Organisms → cellular organisms → Bacteria → Acidobacteria1244Open in IMG/M
3300009143|Ga0099792_10931507All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300009148|Ga0105243_10507824All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300009177|Ga0105248_10868024All Organisms → cellular organisms → Bacteria → Acidobacteria1019Open in IMG/M
3300010329|Ga0134111_10405968All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300010379|Ga0136449_100149193All Organisms → cellular organisms → Bacteria → Acidobacteria4594Open in IMG/M
3300010399|Ga0134127_10185507All Organisms → cellular organisms → Bacteria1922Open in IMG/M
3300012198|Ga0137364_10254619All Organisms → cellular organisms → Bacteria → Acidobacteria1298Open in IMG/M
3300012683|Ga0137398_10500866All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300012685|Ga0137397_10943760All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300012924|Ga0137413_10130752All Organisms → cellular organisms → Bacteria1613Open in IMG/M
3300012924|Ga0137413_11043532All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300015371|Ga0132258_11677472All Organisms → cellular organisms → Bacteria → Acidobacteria1603Open in IMG/M
3300015371|Ga0132258_13492607All Organisms → cellular organisms → Bacteria → Acidobacteria1077Open in IMG/M
3300015374|Ga0132255_103002240All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300018028|Ga0184608_10421163All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300018061|Ga0184619_10335007All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300018071|Ga0184618_10060807All Organisms → cellular organisms → Bacteria → Acidobacteria1398Open in IMG/M
3300018076|Ga0184609_10087901All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis1382Open in IMG/M
3300018476|Ga0190274_13686367All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300018482|Ga0066669_10103735All Organisms → cellular organisms → Bacteria → Acidobacteria1982Open in IMG/M
3300021080|Ga0210382_10403427All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300021344|Ga0193719_10191626All Organisms → cellular organisms → Bacteria → Acidobacteria875Open in IMG/M
3300022756|Ga0222622_10282105All Organisms → cellular organisms → Bacteria → Acidobacteria1137Open in IMG/M
3300025159|Ga0209619_10171712All Organisms → cellular organisms → Bacteria1235Open in IMG/M
3300025901|Ga0207688_10299949All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300025907|Ga0207645_10037781All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales3099Open in IMG/M
3300025922|Ga0207646_10224140All Organisms → cellular organisms → Bacteria1698Open in IMG/M
3300025926|Ga0207659_10163698All Organisms → cellular organisms → Bacteria → Acidobacteria1749Open in IMG/M
3300025927|Ga0207687_11050185All Organisms → cellular organisms → Bacteria → Acidobacteria699Open in IMG/M
3300025936|Ga0207670_11472414All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300025942|Ga0207689_10732481All Organisms → cellular organisms → Bacteria → Acidobacteria834Open in IMG/M
3300025960|Ga0207651_10170609All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales1715Open in IMG/M
3300025981|Ga0207640_10025740All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis3565Open in IMG/M
3300026035|Ga0207703_10334176All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1391Open in IMG/M
3300026089|Ga0207648_10165779All Organisms → cellular organisms → Bacteria → Acidobacteria1952Open in IMG/M
3300026118|Ga0207675_100260895All Organisms → cellular organisms → Bacteria1679Open in IMG/M
3300026121|Ga0207683_10480699All Organisms → cellular organisms → Bacteria → Acidobacteria1146Open in IMG/M
3300027903|Ga0209488_10384147All Organisms → cellular organisms → Bacteria → Acidobacteria1041Open in IMG/M
3300027903|Ga0209488_10991371All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300027905|Ga0209415_10048264All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis5544Open in IMG/M
3300028380|Ga0268265_10856127All Organisms → cellular organisms → Bacteria → Acidobacteria890Open in IMG/M
3300028380|Ga0268265_11326473All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300028717|Ga0307298_10194052All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300028784|Ga0307282_10359280All Organisms → cellular organisms → Bacteria → Acidobacteria704Open in IMG/M
3300028791|Ga0307290_10069234All Organisms → cellular organisms → Bacteria1281Open in IMG/M
3300028807|Ga0307305_10220602All Organisms → cellular organisms → Bacteria → Acidobacteria869Open in IMG/M
3300028812|Ga0247825_10000013All Organisms → cellular organisms → Bacteria → Acidobacteria107495Open in IMG/M
3300028812|Ga0247825_10203997All Organisms → cellular organisms → Bacteria → Acidobacteria1367Open in IMG/M
3300028819|Ga0307296_10173288All Organisms → cellular organisms → Bacteria → Acidobacteria1169Open in IMG/M
3300028819|Ga0307296_10680795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300030006|Ga0299907_10589956All Organisms → cellular organisms → Bacteria → Acidobacteria866Open in IMG/M
3300031944|Ga0310884_10058957All Organisms → cellular organisms → Bacteria → Acidobacteria1752Open in IMG/M
3300031965|Ga0326597_10116110All Organisms → cellular organisms → Bacteria → Acidobacteria3241Open in IMG/M
3300031965|Ga0326597_11951109All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300032017|Ga0310899_10690731All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300032157|Ga0315912_10566375All Organisms → cellular organisms → Bacteria → Acidobacteria904Open in IMG/M
3300033412|Ga0310810_10002272All Organisms → cellular organisms → Bacteria → Acidobacteria20562Open in IMG/M
3300033412|Ga0310810_10967567All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300034129|Ga0370493_0010160Not Available2724Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.82%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.94%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.94%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.96%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.96%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.98%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.98%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.98%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.98%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.98%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.98%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.98%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.98%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.98%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.98%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300034129Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11155426833300000956SoilMIAYLLASALSCDPALTALFTPLHSILGHYEVCTTADPLDRVAAPAPDSPQYAPSEMLEPSEAFGAAGPYNRALLARLYAGKRVRVARGWIARADRFESVTLLSPYPDATLTRLQPGTMMITWTLPRER*
Ga0062593_10059979923300004114SoilMILVLLITTLVSCDPVFAALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESVTLLSPYPDATLTRLLPGTMVIRWTTVVRR*
Ga0062593_10203451513300004114SoilMILVLLAATLVSCDPVLTALFTPLHPSVGRYEVCTTTDPLVAMVDVAPGGPHYGPTELLEPFDAFGAAGSYDRAALALLYAGTRVRVARGWTEYPDRFESVTLLSPYPDATLTRLLPGTMVIRWTTAVRR*
Ga0062590_10021760323300004157SoilMILVLLAATLVSCDPVLTALFTPARPSIGRYQICTTAEPLDMVAAESADGPHYGPSELLEPLDAFGAAGSYNRAAVTRLYAGKRVRVVRGWIDHADRFESITLLSPYPDATLTRLLPGTMVIRWTTAVRR*
Ga0062590_10197046723300004157SoilLTTPVSCDPAMTALFTPSRPSLGRYEVCTTTDPLVEVAAAGPRFGPIELLEPFDAFGAAGSYDRAALARLYAGTRVRVARGWTAHVDRFESVTLLSPYPDAALTRLLPGTMVIRWTTAVRR*
Ga0063356_10350953613300004463Arabidopsis Thaliana RhizosphereDPALTALFTPSRPSVGRYEVCTTTDPLVDVAAAGPHYGPTELVEPPDAFGAAGPYNRAALARLYAGKRVRVARGWTEYVDRFESVTLLSPYPDATLTRLLPGTMVIRWTTAVRR*
Ga0062591_10039236923300004643SoilMILVLLITTLVSCDPVFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESVTLLSPYPDATLTRLLPGTMVIRWTTVVRR*
Ga0066673_1006819743300005175SoilMIAYLLAFLTTSLSCDPALTALFTPPRPSLGRYEVCTTTDPLAKVAAGGPRYGPIEPLEPLDAFGAAGSYSRAALARLYAGRRVRVARGWIAYADRFESVTLLSPYPDATLTRLLPGTMVIRWTRAVRR*
Ga0066675_1051882923300005187SoilMIAYLLAAALSCDPALNALFTPVRPSLGSYQVCTTPDSLERVAERDRQVQFSASEMLDPLDAFAAGTYNRAALARLYSGLRVRVARGWARYGDRFESVTLLSPYPDATLTRLVPGTMVITWSVRAERLAQTAPELK*
Ga0065715_1002761513300005293Miscanthus RhizosphereMILVLLITTLVSCDPAFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESVTLLSPYPDATLTRLLPGTMVIRWTTVVRR*
Ga0070677_1060325023300005333Miscanthus RhizosphereMILVLLAAVIVTCDPALTALFTPPGPAIGRYEVCTTEQPLERVTTDTAEEPGAPHYGPSELLDPLDAFGSAGSYSRAALARLYNGQRVRVVRGWLDRDGHFESITLLSPYPDATLTKLVAGTMIIRWTTVRP*
Ga0068868_10061017333300005338Miscanthus RhizosphereMILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGEAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVGR*
Ga0070691_1098643313300005341Corn, Switchgrass And Miscanthus RhizosphereMIAYLLAAAMACDPALTALFTPPRPGMGRYEVCTTTDPLEAIAAGGGGPRYGASEQMEPLDAFGAAGSFDRAALARLYAGKRVRVARGWIEYADRFESVTLLSPYPNATLTRLLPGTMAIRWTLSR*
Ga0070669_10126471623300005353Switchgrass RhizosphereRLSLMILVLLAAVIATCDPALTALFTPLRPAVGRYDVCTTDQPLERVATDTAEGPGTPRYGPSELLDPLDAFGAAGSYSRAALARLYNGQRVRVARGWLDRNGHFESVTLLSPYPDATLTKLVPGTMMIRWTTVRP*
Ga0070674_10005477143300005356Miscanthus RhizosphereMILVLLAAVIVTCDPALTALFTPPGPAIGRYDVCTTEQPLERVTTDTAEEPGAPHYGPSELLDPLDAFGSAGSYSRAALARLYNGQRVRVARGWLDRDGHFESITLLSPYPDATLTKLVAGTMIIRWTTVRP*
Ga0070673_10000106643300005364Switchgrass RhizosphereMILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGEAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVRR*
Ga0070701_1108688323300005438Corn, Switchgrass And Miscanthus RhizospherePLMILVLLITTLVSCDPAFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESVTLLSPYPDATLTRLLPGTMVIRWTTVVRR*
Ga0070705_10020082913300005440Corn, Switchgrass And Miscanthus RhizosphereMILVLLITTLVSCDPAFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESITLLSPYPDATLTRLLPGTMVIRWTTVVRR*
Ga0070707_10007470533300005468Corn, Switchgrass And Miscanthus RhizosphereMILVLLFATLLSCDPALTALFTPPRPGLGRYEVCTTTDPLEEVAAAGPRFGPIELLEPFDAFGGAGSYDRAALARLYAGTRVHVARGWMAHVDRFESITLLSPYPDATLTRLLPGTMVIRWTTAVRR*
Ga0070707_10210980313300005468Corn, Switchgrass And Miscanthus RhizosphereMIAYLLGLLMTWTLAPAPLSCDPALTALFTPPRPGLGRYEVCTTTDSFEAVAAGVGRPRYAPSELVDPLDAFGAAGPYDRSALARLYAGKRVRVARGWIDNAERFESITLLSPYPDATLTRLLPGTMIITWSLSK*
Ga0073909_1007612723300005526Surface SoilMIAYLLALLTTSLSCDPALAALFTPLRPGLGRYEVCTTTDPLEDVAAGVGAPQSGPSEMLDPLDAFGAAGRYDRSALARLYGGKRVRVARRWIEHGDRFESVTLLSPYPNAALNRLVPGTMIIRWTLAR*
Ga0070697_10097621613300005536Corn, Switchgrass And Miscanthus RhizosphereMILVLLFATLLSCDPALTALFTPPRPGLGRYEVCTTTDPLVEVAAAGPRFGPIELLEPFDAFGGAGSYDRAALARLYAGTRVHVARGWVAHVDRFESITLLSPYPDATLTRLLPGTMVIRWTTAVRR*
Ga0070672_10182454023300005543Miscanthus RhizosphereMILVLLITTLVSCDPAFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESVTLLSPYPDATLTRLLP
Ga0070686_10136669413300005544Switchgrass RhizosphereCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGEAGSYDRAALALLYAGKRVRVARGWIEYSDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVRR*
Ga0070695_10064623623300005545Corn, Switchgrass And Miscanthus RhizosphereMILVLLFATLLSCDPALTALFTPLRPGLGRYEVCTTTDPLVEVAATGPRFGPVELLEPFDAFGAAGSYDRAALARLYAGTRVRVARGWMEYVDRFESVTLVSPYPDAALTRLLPGTMVIRWTTAVRR*
Ga0070665_10179214313300005548Switchgrass RhizosphereMILVLLAAVIATCDPALTALFTPLRPAVGRYDVCTTDQPLERVATDTAEGAGSPSYGPSELLDPLDAFGAAGSYSRASLARLYNGQRVRVARGWVDRDGRFESITLLSPYPDATLTKLVAGTMMIRWTTVRP*
Ga0066701_1039142323300005552SoilMILVLLVATLVSCDPALTALFTPARPSIGRYQICTTAEPVDVVAAQNADAPHYGPSEMLDPLDAFGTAGPYDRAALTRLYGGKRVRVARGWIDSADRFEAITLLSPYPDATLTRLLPGTMIITWSLSK*
Ga0066700_1054009923300005559SoilDMAGLKGPACLVAGLLSCNPALTALFTPRHAQTGQYEVCTTPEPLSDVARAGWTVGAPEDASPLDAFGAAGSYDRSALARLYGGTRPRLIRGWTQNGDRFESVTLISPYPDATLTRLVPGTMVIRYSLQRGL*
Ga0066699_1029104723300005561SoilMILGLLVATLVSCDPALTARFTPPRPALGRYAVCTTTDSLEAVAAGAGGPHYTPSELVDPLDAFGAAGPYDRSALARLYGGTRVRVARGWIDNADRFESITLLSPYPDATLTRLLPGTMIIRWTLSH*
Ga0068854_10003945833300005578Corn RhizosphereMILVLLTATLVSCDPVLTALFTPLRPSVGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSYDRAALALLYAGQRVRVARGWIEYSDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVRR*
Ga0070702_10132813223300005615Corn, Switchgrass And Miscanthus RhizosphereMLLVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGEAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAV
Ga0068861_10075133623300005719Switchgrass RhizosphereRAPRLGLQAPLMILVLLTATLVSCDPVLTALFTPLRPSVGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSHDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVRR*
Ga0068860_10076902013300005843Switchgrass RhizosphereMILVLLITTLVSCDPAFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESVTLLSPYPDATLTRLLPG
Ga0068862_10141482313300005844Switchgrass RhizosphereMIAYLLAAAMVCDPALTALFTPPRPGMGRYEVCTTTDPLEAVAAGGGGPLYGASEQMEPLDAFGAAGSFDRAALARLYAGKRVRVARGWIEYADRFESVTLLSPYPNATLTRLLPGTMAIRWTLSR*
Ga0068862_10174110623300005844Switchgrass RhizosphereALTALFTPSRPSVGRYEVCTTTDPLVDVAAAGPHYGPTELVEPPDAFGAAGPYDRAALARLYAGKRVRVARGWIEYADRFESVTLLSPYPDATLTRLLPGTMVIRWTTAVRR*
Ga0097621_10234663613300006237Miscanthus RhizosphereMILVLLAVALASCDPALTALFTPVRPISGHYEVCTSDEPLDRVASDTAGAPRFSPSETIDPLDAFGAAGSYSRSALAQLYAGRRVRVARGWVDRGGQFESVTLLSPYPDPTLTRLLPGTMIV
Ga0066665_1079407813300006796SoilCDPALTARFTPPRPALGRYAVCTTTDSLEAVAAGAGGPHYTPSELVDPLDAFGAAGPYDRSALARLYGGTRVRVARGWIDNAERFESITLLSPYPDATLTRLLPGTMIIRWTLSR*
Ga0066659_1185948423300006797SoilDPALTALFTPPRPSVGAYQICTTTQSLDALTAQASDGPRYGPPELLEPLDAFGAAGPYDRAALARLYGGTSVRVARGWIARLDRFESITLLSPYPDATFTHLFPGTMIVTWTVTR*
Ga0075433_1046000423300006852Populus RhizosphereMIAYLLAAALSCDPALTALFTPPRPGLGRYEVCTTADPIDQVAGGTPDQPHYSPVESLEALEAFGAAGTYSRSALARLYAGKRVRVMRGWIQQGDRFVSMTLLSPYPDAALTKLFPGTMVITWTTSRWQVRP*
Ga0066710_10037212523300009012Grasslands SoilMIAYLLGLLMTWTMAPAPLSCDPALTALFTPPRPGLGRYEVCTTTDSLEAVAAGVGGPRYAPSELVDPLDAFGAAGPYDRSALARLYAGKRVRVTRGWIDNAERFESITLLSPYPDATLTRLLPGTMIIRWTLSR
Ga0066710_10108612523300009012Grasslands SoilMIAYLLALWTTSLACDPALAALFTPPRPGLGRYEVCTTTDPLVEVAAAGPHYGPTELLEPFEAFGAAGSYDRAALARLYAGTRVRVARGWMEYVDRFESVTLLSPYPDATLTRLLPGTMVIRWTTEVRR
Ga0105245_1035213123300009098Miscanthus RhizosphereMILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSHDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVGR*
Ga0066709_10096752333300009137Grasslands SoilMIAYLLGLLMTWTMAPAPLSCDPALTALFTPPRPGLGRYEVCTTTDSLEAVAAGVGGPRYAPSELVDPLDAFGAAGPYDRSALARLYGGTRVRVARGWIDNADRFESITLLSPYPDATLTRLLPGTMIITWS
Ga0099792_1093150723300009143Vadose Zone SoilMILVLLFATLLSCDPALTVLFTPPRPGLGRYEVCTTTDPLVEVAAGGPHYGPTELLEPVDAFGTAGSYDRAALARLYGGTRVRVARGWMEYVDRFESVTLLSPYPDAALTRLLPG
Ga0105243_1050782423300009148Miscanthus RhizosphereMILVLLTATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGEAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVRR*
Ga0105248_1086802433300009177Switchgrass RhizosphereMILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVGR*
Ga0134111_1040596813300010329Grasslands SoilMIAYLLALWTTSLACDPALAALFTPPRPGLGRYEVCTTTDPLVEVAAAGPHYGPTELLEPFEAFGAAGSYDRAALARLYAGTRVRVARGWMEYVDRFESVTLLSP
Ga0136449_10014919343300010379Peatlands SoilMILALLVAALVACDPALTALFTPPHPRVGGYQICTTTEPLDSLTAEAPGGPRYGPPEMLEPLAAFGAAGPYDRAALARLYGGKRVRVVRGWIERRARFESITLLSPYPDATLTRLLPGTMIISWTMPVGPG*
Ga0134127_1018550723300010399Terrestrial SoilMIAYLLALVSTLTPWTAPFSCDPALTALFTPSRPSVGRYEVCTTTDPLVDVAAAGPHYGPTELVEPPDAFGAAGPYDRAALARLYAGKRVRVARGWMEYVDRFESVTLLSPYPDATLTRLLPGTMVIRWTTAVRR*
Ga0137364_1025461913300012198Vadose Zone SoilMILVLLITTLVSCDPALTALFTPPRPGLGRYEVCTTTDPLGEVAERAAGPHYGPTELLEPFDAFGAAGSYDRAALARLYAGTRVRVARGWIRYVDRFESVTLLSPYPDAMLTRLLPGTMVITWTTAVRR*
Ga0137398_1050086613300012683Vadose Zone SoilMILVLLFATLLSCDPALTALFTPPRPGLGRYEVCTTTDPLVEVAAGGPHYGPTELLEPVDAFGTAGSYDRAALARLYGGTRVRVARGWMEYVDRFESVTLLSPYPDAALTRLLPGTMVIRWTTAVR
Ga0137397_1094376013300012685Vadose Zone SoilMILVLLFAKLLSCDPALTALFTPPRPGLGRYEVCTTTDPLVEVAAAGPRFGPIELLEPFDAFGGAGSYDRAALARLYGGTRVHVARGWMAYVDRFESITLLSPYPDATLTRLLPGTMVIRWTTAVRR*
Ga0137413_1013075243300012924Vadose Zone SoilMILVLLFATLLSCDPALTALFTPPRPGLGRYEVCTTTDPLVEVAAGGPHYGPTELLEPVDAFGTAGSYDRAALARLYGGTRVRVARGWMEYVDRFESVTLLSPYPDAALTRLLPGTMVIRWTTAVRR*
Ga0137413_1104353213300012924Vadose Zone SoilMILGLLLAALLSCDPALTALFTPATPGLGRYEVCTTSQPLDQVADDASGERARYAPSEMLEALDAFGAAGPYDRARLARLYGGKRVRIARGWRERPDRFESITLLSPYPDATLSRLVPGTMVITWTLPR*
Ga0132258_1167747223300015371Arabidopsis RhizosphereMILVLLAAVIATCDPALTALFTPLRPAVGRYDVCTTDQPLERVATDTAEGSEEPHYGPSELLDPLDAFGAAGPYSRAALARLYNGQRVRVARGWLDRDGQFESITLLSPYPDATLTKLVPGTMMIRWTTVRP*
Ga0132258_1349260723300015371Arabidopsis RhizosphereLLAAVLTSCDPALTALFTPARPIVGHYEVCTSDEPLERVASDTTGARFSPSELTEPLDAFGAVGSYSRSALAQLYAGRRVRVARGWADRGDQFESVTLLSPYPDPTLTRLLPGTLIVRWTTLRR*
Ga0132255_10300224023300015374Arabidopsis RhizosphereAAVRASCDPALTALFTPPRPIVGHYDVCTSDEPLERVASDTTGARFSPSELTEPLDAFGAVGSYSRSALAQLYAGRRVRVARGWADRGDQFESVTLLSPYPDPTLTRLLPGTLIVRWTTLRR*
Ga0184608_1042116323300018028Groundwater SedimentVPIALLTLLLGPSTTSLSCDPALTALFTPLRPGLGRYEVCTTTDPLVEVAAAGPRFGPIEVLEPFDAFGAAGSYDRAALARLYRGTRVRVTRGWMAYVDRFESVTLLSPYPDATVTRLLPGTMVIRWTTAVRR
Ga0184619_1033500723300018061Groundwater SedimentMILVLLISTLVSCDPALTALFTPLRPGLGRYEVCTTTDPLVEVAAAGPRFGPIELLEPFDAFGAAGSYDRAALARLYGGTRVRVTRGWMAYVDRFESVTLLSPYP
Ga0184618_1006080723300018071Groundwater SedimentFELYVMIAYLLAGALACDPALTALFTPPRPRVGRYEVCTTTDPLVEVAAAGPRYGAIEQLEPFDAFGAAGSYDRAALARLYGGTRVRVTRGWMAYVDRFESVTLLSPYPDATVTRLLPGTMVIRWTTAVRR
Ga0184609_1008790123300018076Groundwater SedimentMILVLLFATLLSCDPALTALFTPPRPGLGRYEVCTTTDPLVEVAAAGPRFGPIEVLEPFDAFGAAGSYDRAALARLYAGTRVRVARGWMADVDRFESVTLLSPYPDAMLTRLLPGTMVIRWTTAVRR
Ga0190274_1368636723300018476SoilMILVLLAAVLTTCDPALTALFTPLRPVLGRYEVCTTEAPLDRVASDTPDGTHYSPSELLEPLDAFGAAGSYSRAALARLYTGRRVRVVRGWIDRGDRFESVTLLSPY
Ga0066669_1010373523300018482Grasslands SoilMIAYLLAFLTTSLSCDPALTALFTPPRPSLGRYEVCTTTDPLAKVAAGGPRYGPIEPLEPLDAFGAAGSYSRAALARLYAGRRVRVARGWIAYADRFESVTLLSPYPDATLTRLLPGTMVIRWTRAVRR
Ga0210382_1040342713300021080Groundwater SedimentMIAYLLALLTLLTLLTLSTLSIPLAPSATSLSCDPALTALFTPPRPGLGRYEVCTTTDSLVEVAAAGPRFGPIELLEPLDAFGAAGSYDRAVLARLYAGQRVRVARGWMAYVDRFESVTLLSPYPDAALTRLRPGTMVIRWTTAVRR
Ga0193719_1019162623300021344SoilMIAYLLALFALLTLLPGPSTTSLSCDPALTALFTPLRPGLGRYEVCTTTDPLVEVAGAGPSFGPIELLEPFDAFGAAGSYDRAALARLYRGTRVRVTRGWMAYVDRFESVTLLSPYPDATVTRLLPGTMVIRWTTAVRR
Ga0222622_1028210523300022756Groundwater SedimentMIAYLLALLALFTLLPGPSMTSLSCDPALTALFTPLRPGLGRYEVCTTTDPLVEVAAAGPRFGPIELLEPFDAFGAAGSYDRAALARLYGGTRVRVTRGWMAYVDRFESVTLLSPYPDATLTRLLPGTMVIRWTTAVRR
Ga0209619_1017171223300025159SoilMIAYLLAAALACDPALTALFTPPRPSLGRYEVCTTTEPFDDAAAGAGGPHYGPSELLEPLDAFGAAGSYSRAALTRLYAGKRVRVARGWIEYVDRFESITLLSPYPDATLTRLLPGTMVIRWTTEVRR
Ga0207688_1029994923300025901Corn, Switchgrass And Miscanthus RhizosphereMILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVGR
Ga0207645_1003778153300025907Miscanthus RhizosphereMILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGEAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVGR
Ga0207646_1022414023300025922Corn, Switchgrass And Miscanthus RhizosphereMILVLLFATLLSCDPALTALFTGLGRYEVCTTTDPLEEVAAAGPRFGPIELLEPFDAFGGAGSYDRAALARLYAGTRVHVARGWMAHVDRFESITLLSPYPDATLTRLLPGTMVIRWTTAVRR
Ga0207659_1016369833300025926Miscanthus RhizosphereMILVLLAAVIVTCDPALTALFTPPGPAIGRYDVCTTEQPLERVTTDTAEEPGAPHYGPSELLDPLDAFGSAGSYSRAALARLYNGQRVRVARGWLDRDGHFESITLLSPYPDATLTKLVAGTMIIRWTTVRP
Ga0207687_1105018513300025927Miscanthus RhizosphereMILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSHDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVGR
Ga0207670_1147241423300025936Switchgrass RhizosphereMILVLLITTLVSCDPVFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGLHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESITLLSLYPDA
Ga0207689_1073248123300025942Miscanthus RhizosphereMILVLLITTLVSCDPAFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESVTLLSPYPDATLTRLLPGTMVIRWTTVVRR
Ga0207651_1017060943300025960Switchgrass RhizosphereMILVLLAATLVSCDPVLTALFTPLRPSAGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGEAGSYDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVRR
Ga0207640_1002574043300025981Corn RhizosphereMILVLLTATLVSCDPVLTALFTPLRPSVGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSYDRAALALLYAGQRVRVARGWIEYSDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVRR
Ga0207703_1033417623300026035Switchgrass RhizosphereMILVLLITTLVSCDPAFTALFTPMRPSVGRYEVCTTTDPLGEVAAGGPHFGPTELLEPFDAFGAAGSYDRAALALLYAGKRVRVARGWIDYPDRFESITLLSPYPDATLTRLLPGTMVIRWTTVVRR
Ga0207648_1016577923300026089Miscanthus RhizosphereMISLKSGLQAFGSRLSLMILVLLAAVIVTCDPALTALFTPPGPAIGRYDVCTTEQPLERVTTDTAEEPGAPRYGPSELLDPLDAFGSAGSYSRAALARLYNGQRVRVARGWLDRDGHFESITLLSPYPDATLTKLVAGTMIIRWTTVRP
Ga0207675_10026089523300026118Switchgrass RhizosphereMILVLLTATLVSCDPVLTALFTPLRPSVGRYEVCTTTDPLVEVAAGGPHYGPTELLEPFDAFGAAGSHDRAALALLYAGKRVRVARGWIEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTAVRR
Ga0207683_1048069913300026121Miscanthus RhizosphereQMISLKSGLQAFGSRLSLMILVLLAAVIVTCDPALTALFTPPGPAIGRYDVCTTEQPLERVTTDTAEEPGAPHYGPSELLDPLDAFGSAGSYSRAALARLYNGQRVRVARGWLDRDGHFESITLLSPYPDATLTKLVAGTMIIRWTTVRP
Ga0209488_1038414723300027903Vadose Zone SoilMILVLLFATLLSCDPALTVLFTPPRPGLGRYEVCTTTDPLVEVAAGGPHYGPTELLEPVDAFGTAGSYDRAALARLYGGTRVRVARGWMEYVDRFESVTLLSPYPDAALTRLLPGTMVIRWTTAVRR
Ga0209488_1099137123300027903Vadose Zone SoilMIAYLLVLLVTSTTLTMSPTTLSCDPALTALFTPSRPSLGRYEVCTTTDPLEEVAAAGPHYGPSELLEAVDAFGSAGPYDRAALARLFAGKRVRVTRGWIEYGDRFESVTLLSPYPDATLRRLLPGTMIIRWTFAR
Ga0209415_1004826423300027905Peatlands SoilMILALLVAALVACDPALTALFTPPHPRVGGYQICTTTEPLDSLTAEAPGGPRYGPPEMLEPLAAFGAAGPYDRAALARLYGGKRVRVVRGWIERRARFESITLLSPYPDATLTRLLPGTMIISWTMPVGPG
Ga0268265_1085612723300028380Switchgrass RhizosphereMIAYLLAAAMACDPALTALFTPPRPGMGRYEVCTTTDPLEAVAAGGGGPLYGASEQMEPLDAFGAAGSFDRAALARLYAGKRVRVARGWIEYADRFESVTLLSPYPNATLTRLLPGTMAIRWTLSR
Ga0268265_1132647323300028380Switchgrass RhizosphereYLLALVSTLTPWTAPFSCDPALTALFTPSRPSVGRYEVCTTTDPLVDVAAAGPHYGPTELVEPPDAFGAAGPYDRAALARLYAGKRVRVARGWIEYADRFESVTLLSPYPDATLTRLLPGTMVIRWTTAVRR
Ga0307298_1019405213300028717SoilMILVLLAATLVSCDPVLTALFTPLRPSVGRYEVCTTTDPLVAVVEVAAGGPHYGPTELLEAFDAFGTAGSYNRAALALLYAGKRVRVARGWTEYPDRFESVTLL
Ga0307282_1035928013300028784SoilMILVLLAATLVSCDPVLTALFTPLRPSVGRYEVCTTTDPLVAVIEVAAGGPHYGPTELLEPFDAFGAAGSYNRAALALLYAGKRVRVARGWTEYPDRFESVTLLSPYPDATLTRLLPGTMVIKWTTVVRR
Ga0307290_1006923423300028791SoilMILVLLISTLVSCDPALTALFTPLRPGLGRYEVCTTTDPLVEVAAAGPRFGPIELLEPFDAFGAAGSYDRAALARLYGGTRVRVTRGWMAYVDRFESVTLLSPYPDATVTRLLPGTMVIRWTTAVRR
Ga0307305_1022060223300028807SoilMIAYLLALLALLTLLPGPSTTSLSCDPALTALFTPLRPGLGRYEVCTTTDPLVEVAAAGPRFGPIELLEPFDAFGAAGSYDRAALARLYGGTRVRVTRGWMAYVDRFESVTLLSPYPDATVTRLLPGTMVIRWTTAVRR
Ga0247825_10000013313300028812SoilMIAYILTAALACDPLLTALFTPPRPSLGRYEICTTLEPLEVVADAADGHLYGSVETLGPLDAFGAAGTYDRLKLARLYAETGVRVVRGWRIRGNDFESVTLLSPYPDAGLTRLVPGTMVIRFVLPAR
Ga0247825_1020399723300028812SoilMIAYLLAATLSCDAALTALFTPLHPILGRYEVCTTGDPLDQVAAPAPDGPKYGPSEMLEPLEAFGAAGPYDRAALARLYAGRRVRVARGWIERDGEFESITLLSPYPDATLARLHPGTMVIKWTMSR
Ga0307296_1017328823300028819SoilMIAYLLALLALFTLLPGPSMTSLSCDPALTALFTPLRPGLGRYEVCTTTDPLVEVAGAGPSFGPIELLEPFDAFGAAGSYDRAALARLYRGTRVRVTRGWMAYVDRFESVTLLSPYPDATVTRLLPGTMVIRWTTAVRR
Ga0307296_1068079513300028819SoilMILVLLFATLLSCDPALTALFTPPRPGLGRYEVCTTTDPLVEVAAGGPHYGPTELLEPVDAFGTAGPYDRAALTRLYGGTRVRVARGWMEYVDRFESVTLLSPYPDAALT
Ga0299907_1058995623300030006SoilMIAYLLAASLACDPALTALFTPLRPLIGRYEVCTTADPLERVAAPAPDGPQYGPSEALDPLEAFGAAGPYDRAALARLYAGQRVRVARGWVERDDRFESITLLSPHPDATLARLRPGTMVIKWTLQRGR
Ga0310884_1005895723300031944SoilMILVLLAAVIATCDPALTALFTPLRPAVGRYEVCTTGQPLERVATDTAEGAGSPSYGPSELLDPLDAFGAAGSYSRASLARLYNGQRVRVARGWVDRDGRFESITLLSPYPDATLTKLVAGTMMIRWTTVRP
Ga0326597_1011611023300031965SoilMIAYLLAAALSCDPALTALFTPLRPRLGRYEVCTTADPLDRVAVPAPDGPRYGPSEMLEPLEAFGAAGPYDRSALTRLYAGKRVRVARGWIDRGNRFESVTLISPYPDATLTRLLPGTMVIRWTLK
Ga0326597_1195110913300031965SoilTALFTPLRPRLGRYEVCTTADPLDRVAAPAPDGPRYGPSEMLEPLEAFGGAGPYDRGALARLYAGTRVRVAHGWIDRGAAFESVTLISPYPDATLTRLLPGTMVIRWTLK
Ga0310899_1069073113300032017SoilMILVLLAAVIATCDPALTALFTPLRPAVGRYEVCTTGQPLERVATDTAEGAGRPSYGPSELLDPLDAFGAAGSYSRASLARLYNGQRVRVARGWVDRDGRFESITLLSPYPDATLTKLVAGTMMIRWTTVRP
Ga0315912_1056637523300032157SoilMILVLLAAALASCDPALTALFTPARPLLGHYEVCTSDEPLERVAAGSGDTAGTPRFGASELVDPLDALGSAGSASRSRIAQLYGGQRVRVARGWVDHGDRFESVTILSPYPDQTLTRLLPGTLIVRWTMVRR
Ga0310810_10002272133300033412SoilMIAYLLAAALACDPALTALFTPPRPALGRYEVCTTTDPLEAVAASAGGPRYGPVEMLDPLDAFGAAGSYGRAALARLYAGTRVHVARGWIDRADQFESVTLLSPYPDVTLTRLLPGTMVIRWTLSR
Ga0310810_1096756713300033412SoilMIAYLLAAALACDPALATLFTPARPGVGRYEVCTTTDPLEGVEAAIAARSMHYGPIEQIEALDAFGSAGSYSRAALARLYGGKRVRVARGWSQDGDRFESITLLSPYPDA
Ga0370493_0010160_2324_27223300034129Untreated Peat SoilMIPVLFAAALLSCDPGLQALFTPGHPPFGRYAVCTTDRPIDRIVADPAADRPHFGPGEMLEALDAFGAAGPYDRGALARLYGGKRVRVVRGWVERQDAFESVTLLSPYPDATLAHLVAGTMVITWTLPRQRTT

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.