Metagenome Family F101350

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101350
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	47 residues
Representative Sequence	GSVSPDGSGVTVSTGAADVNVITWNAIDPDASQTWTNIDPL
Number of Associated Samples	69
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.95 %
% of genes near scaffold ends (potentially truncated)	94.12 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.824 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (41.176 % of family members)
Environment Ontology (ENVO)	Unclassified (96.078 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (89.216 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07880	T4_gp9_10	3.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
All Organisms	root	All Organisms	41.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
cellular organisms	root	All Organisms → cellular organisms	39.22 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.22 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.37 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.45 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	13.73 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	13.73 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	13.73 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	13.73 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	13.73 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	13.73 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	13.73 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	13.73 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	13.73 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	13.73 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	13.73 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	13.73 %
unclassified Flavobacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.82 %
Candidatus Pelagibacter sp. TMED203	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	13.73 %
Rhodobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	13.73 %
Flavobacterium sp. SCGC AAA160-P02	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. SCGC AAA160-P02	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.96 %
Viruses	superkingdom	All Organisms → Viruses	1.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001117\|JGI11785J13272_1012337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	1050	Open in IMG/M
3300001721\|JGI24528J20060_1007916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	651	Open in IMG/M
3300001727\|JGI24529J20061_102746	Not Available	869	Open in IMG/M
3300001727\|JGI24529J20061_104349	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. SCGC AAA160-P02	701	Open in IMG/M
3300001728\|JGI24521J20086_1013917	Not Available	644	Open in IMG/M
3300001731\|JGI24514J20073_1022535	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. SCGC AAA160-P02	558	Open in IMG/M
3300001732\|JGI24652J20063_1008872	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300001733\|JGI24655J20075_1012128	Not Available	941	Open in IMG/M
3300002511\|JGI25131J35506_1036244	Not Available	680	Open in IMG/M
3300002511\|JGI25131J35506_1064573	Not Available	510	Open in IMG/M
3300002760\|JGI25136J39404_1022286	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300002760\|JGI25136J39404_1076069	Not Available	627	Open in IMG/M
3300002760\|JGI25136J39404_1092845	Not Available	567	Open in IMG/M
3300003690\|PicViral_1003892	All Organisms → cellular organisms → Bacteria	4322	Open in IMG/M
3300005514\|Ga0066866_10172570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	766	Open in IMG/M
3300006002\|Ga0066368_10328567	Not Available	518	Open in IMG/M
3300006304\|Ga0068504_1125326	Not Available	681	Open in IMG/M
3300006310\|Ga0068471_1301283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1271	Open in IMG/M
3300006311\|Ga0068478_1316373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	556	Open in IMG/M
3300006311\|Ga0068478_1316374	Not Available	501	Open in IMG/M
3300006313\|Ga0068472_10939381	Not Available	572	Open in IMG/M
3300006313\|Ga0068472_11039238	Not Available	502	Open in IMG/M
3300006316\|Ga0068473_1267213	Not Available	929	Open in IMG/M
3300006324\|Ga0068476_1139248	Not Available	518	Open in IMG/M
3300006324\|Ga0068476_1147234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	774	Open in IMG/M
3300006325\|Ga0068501_1119360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	603	Open in IMG/M
3300006325\|Ga0068501_1119361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	544	Open in IMG/M
3300006326\|Ga0068477_1215356	Not Available	580	Open in IMG/M
3300006336\|Ga0068502_1200945	Not Available	689	Open in IMG/M
3300006336\|Ga0068502_1217889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	1159	Open in IMG/M
3300006336\|Ga0068502_1439751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	647	Open in IMG/M
3300006336\|Ga0068502_1461385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	533	Open in IMG/M
3300006336\|Ga0068502_1515247	Not Available	582	Open in IMG/M
3300006338\|Ga0068482_1192915	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300006338\|Ga0068482_1192916	Not Available	1009	Open in IMG/M
3300006340\|Ga0068503_10272091	All Organisms → cellular organisms → Bacteria → Proteobacteria	1947	Open in IMG/M
3300006340\|Ga0068503_10453737	Not Available	557	Open in IMG/M
3300006340\|Ga0068503_10475782	Not Available	1649	Open in IMG/M
3300006340\|Ga0068503_10598328	Not Available	905	Open in IMG/M
3300006340\|Ga0068503_10607530	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006340\|Ga0068503_10661361	Not Available	507	Open in IMG/M
3300006341\|Ga0068493_10302675	Not Available	1267	Open in IMG/M
3300006341\|Ga0068493_10620144	Not Available	569	Open in IMG/M
3300006341\|Ga0068493_10743919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	538	Open in IMG/M
3300006341\|Ga0068493_10775005	Not Available	559	Open in IMG/M
3300006347\|Ga0099697_1139121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	937	Open in IMG/M
3300006347\|Ga0099697_1174412	Not Available	628	Open in IMG/M
3300006736\|Ga0098033_1171104	Not Available	605	Open in IMG/M
3300006752\|Ga0098048_1110877	Not Available	827	Open in IMG/M
3300006753\|Ga0098039_1264713	Not Available	577	Open in IMG/M
3300006754\|Ga0098044_1169183	Not Available	869	Open in IMG/M
3300007963\|Ga0110931_1029048	Not Available	1672	Open in IMG/M
3300008050\|Ga0098052_1334411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	569	Open in IMG/M
3300008216\|Ga0114898_1046118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1404	Open in IMG/M
3300008216\|Ga0114898_1173643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	611	Open in IMG/M
3300008416\|Ga0115362_100100095	Not Available	712	Open in IMG/M
3300009413\|Ga0114902_1025561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	1861	Open in IMG/M
3300009418\|Ga0114908_1207780	Not Available	606	Open in IMG/M
3300009418\|Ga0114908_1273107	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300009786\|Ga0114999_10980466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	613	Open in IMG/M
3300009791\|Ga0105235_115421	Not Available	846	Open in IMG/M
3300010150\|Ga0098056_1038123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	1679	Open in IMG/M
3300013098\|Ga0164320_10293076	Not Available	781	Open in IMG/M
3300017704\|Ga0181371_1078843	Not Available	534	Open in IMG/M
3300020364\|Ga0211538_1013123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3056	Open in IMG/M
3300020373\|Ga0211660_10053067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1721	Open in IMG/M
3300020398\|Ga0211637_10293233	Not Available	646	Open in IMG/M
3300021973\|Ga0232635_1044242	Not Available	1000	Open in IMG/M
3300025029\|Ga0207900_119919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	545	Open in IMG/M
3300025044\|Ga0207891_1045143	Not Available	518	Open in IMG/M
3300025045\|Ga0207901_1051974	Not Available	541	Open in IMG/M
3300025066\|Ga0208012_1004849	All Organisms → Viruses	2766	Open in IMG/M
3300025069\|Ga0207887_1041832	Not Available	744	Open in IMG/M
3300025069\|Ga0207887_1052895	Not Available	662	Open in IMG/M
3300025069\|Ga0207887_1057888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	633	Open in IMG/M
3300025069\|Ga0207887_1073595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	557	Open in IMG/M
3300025096\|Ga0208011_1105006	Not Available	596	Open in IMG/M
3300025108\|Ga0208793_1023071	All Organisms → Viruses	2161	Open in IMG/M
3300025122\|Ga0209434_1099179	Not Available	835	Open in IMG/M
3300025125\|Ga0209644_1009035	Not Available	2054	Open in IMG/M
3300025125\|Ga0209644_1050428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	951	Open in IMG/M
3300025125\|Ga0209644_1132883	Not Available	593	Open in IMG/M
3300025125\|Ga0209644_1163413	Not Available	530	Open in IMG/M
3300025236\|Ga0207884_1070953	Not Available	535	Open in IMG/M
3300025257\|Ga0207899_1044997	Not Available	714	Open in IMG/M
3300025259\|Ga0207876_1022309	Not Available	940	Open in IMG/M
3300025267\|Ga0208179_1106973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	544	Open in IMG/M
3300025281\|Ga0207881_1052946	Not Available	647	Open in IMG/M
3300025301\|Ga0208450_1126450	Not Available	539	Open in IMG/M
3300025873\|Ga0209757_10017941	Not Available	1942	Open in IMG/M
3300025873\|Ga0209757_10169464	Not Available	687	Open in IMG/M
3300026205\|Ga0208406_1151156	Not Available	524	Open in IMG/M
3300026262\|Ga0207990_1067929	Not Available	949	Open in IMG/M
3300031606\|Ga0302119_10366914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	526	Open in IMG/M
3300031800\|Ga0310122_10121505	Not Available	1280	Open in IMG/M
3300032820\|Ga0310342_100566721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	1280	Open in IMG/M
3300034629\|Ga0326756_009449	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300034629\|Ga0326756_023109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium	733	Open in IMG/M
3300034654\|Ga0326741_008907	Not Available	1919	Open in IMG/M
3300034656\|Ga0326748_004048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED203	1871	Open in IMG/M
3300034656\|Ga0326748_007661	Not Available	1379	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.02%
Sediment	Environmental → Aquatic → Sediment	0.98%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	88.24%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.84%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	57.84%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	24.51%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.84%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	5.88%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.98%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.98%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	41.18%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	24.51%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	13.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	5.88%
Filtered Seawater	Environmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater	4.90%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.94%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.98%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.98%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	0.98%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.98%
Marine, Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume	0.98%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.98%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001117	Marine microbial communities from the Deep Pacific Ocean - MP2098	Environmental	Open in IMG/M
3300001721	Marine viral communities from the Pacific Ocean - LP-54	Environmental	Open in IMG/M
3300001727	Marine viral communities from the Pacific Ocean - LP-55	Environmental	Open in IMG/M
3300001728	Marine viral communities from the Pacific Ocean - LP-46	Environmental	Open in IMG/M
3300001731	Marine viral communities from the Pacific Ocean - LP-37	Environmental	Open in IMG/M
3300001732	Marine viral communities from the Deep Pacific Ocean - MSP-97	Environmental	Open in IMG/M
3300001733	Marine viral communities from the Deep Pacific Ocean - MSP112	Environmental	Open in IMG/M
3300002511	Marine viral communities from the Pacific Ocean - ETNP_2_1000	Environmental	Open in IMG/M
3300002760	Marine viral communities from the Pacific Ocean - ETNP_6_1000	Environmental	Open in IMG/M
3300003690	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assembly	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006316	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_1000m	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental	Open in IMG/M
3300008416	Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12B	Environmental	Open in IMG/M
3300009413	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300009791	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300013098	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cm	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental	Open in IMG/M
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental	Open in IMG/M
3300021973	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Alice_FS923 _150kmer	Environmental	Open in IMG/M
3300025029	Marine viral communities from the Pacific Ocean - LP-39 (SPAdes)	Environmental	Open in IMG/M
3300025044	Marine viral communities from the Pacific Ocean - LP-50 (SPAdes)	Environmental	Open in IMG/M
3300025045	Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)	Environmental	Open in IMG/M
3300025066	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025069	Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025236	Marine viral communities from the Deep Pacific Ocean - MSP-144 (SPAdes)	Environmental	Open in IMG/M
3300025257	Marine viral communities from the Deep Pacific Ocean - MSP-134 (SPAdes)	Environmental	Open in IMG/M
3300025259	Marine viral communities from the Deep Pacific Ocean - MSP-146 (SPAdes)	Environmental	Open in IMG/M
3300025267	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)	Environmental	Open in IMG/M
3300025281	Marine viral communities from the Deep Pacific Ocean - MSP-97 (SPAdes)	Environmental	Open in IMG/M
3300025301	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300026205	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A (SPAdes)	Environmental	Open in IMG/M
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental	Open in IMG/M
3300026262	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034629	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 543_2600	Environmental	Open in IMG/M
3300034654	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244	Environmental	Open in IMG/M
3300034656	Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11785J13272_10123371	3300001117	Deep Ocean	DGSGITISSGAGDVNVITWNAIDPDASQTWTNIDPL*
JGI24528J20060_10079162	3300001721	Marine	DGSGLTVSTGAADVNVITWNPIDPGATQTWTNIDPL*
JGI24529J20061_1027461	3300001727	Marine	DGSGVTVSTGAADVNVITWNPIDPDATQTWTNIDPL*
JGI24529J20061_1043491	3300001727	Marine	SIDGSVAVTGSGLTVSDGAEEVNVITWPAIDPGVSMTWTNIDPL*
JGI24521J20086_10139171	3300001728	Marine	MSGSVSPTGSAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
JGI24514J20073_10225352	3300001731	Marine	AISQGTPTFSIEGTVAVTGSGVAVSMGTVTFSISASVSPDGSGVTVSTGAADVNVLTWNAIDPDVSMTWTNIDPL*
JGI24652J20063_10088723	3300001732	Deep Ocean	ISGSVSPTGSEVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
JGI24655J20075_10121281	3300001733	Deep Ocean	TGSAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
JGI25131J35506_10362442	3300002511	Marine	SGVTISMGTCTYTISGTVSPTGSGVTVSTGAADVNVLTWNAIDPGVSQTWTNIDPL*
JGI25131J35506_10645732	3300002511	Marine	VSGSGVTISMGTCTYTLSGSVSPDGSGVTVSTGAAEVNVITWNPIDPDASQSWTNIDPL*
JGI25136J39404_10222862	3300002760	Marine	MSMLQLVFQGSGVTISMGTCTYTISGSVSPDGSGVTVSTGAADVNVITWNPIDPDASQTWTNIDPL*
JGI25136J39404_10760693	3300002760	Marine	MGTCTYTLSGSVSPDGSGVTVSTGAAEVNVITWNPIDPDASQSWTNIDPL*
JGI25136J39404_10928452	3300002760	Marine	VDIDVTVIVTGSLCGTVGSGTPTYTISGSVSPTGSAVTVSTGAADVNVITWTAIDPDASQSWTNIDPL*
PicViral_10038927	3300003690	Marine, Hydrothermal Vent Plume	VSPTGSGVTVSTGAADVNVITWNPIDTSASQTWTNIDPL*
Ga0066866_101725702	3300005514	Marine	TLTITGSVAPTGSAIVVSTGASKVNVITWNPIDPNVSGTWTPIDPL*
Ga0066368_103285672	3300006002	Marine	VTFTISGSVSPTGSAVTISTGAADVNVITWNAIDTGATQTWTNIDPL*
Ga0068504_11253261	3300006304	Marine	PTGSAVTVSTGAADVNVITWNPIDPDASQTWTNIDPL*
Ga0068471_13012831	3300006310	Marine	TVSQNANGITFTMTGSVSPDGSGVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068478_13163731	3300006311	Marine	SELTISTGAEDVNVITWVPIDPNASQSWTNIDPL*
Ga0068478_13163741	3300006311	Marine	CTYTISGSVSPDGSGVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068472_109393812	3300006313	Marine	SPTGSAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068472_110392382	3300006313	Marine	TMSGSVSPDGSGVTVSTGAADVNVLTWNPIDPGVSMTWTNIDPL*
Ga0068473_12672131	3300006316	Marine	VSMGTVTFTMSGSVIPTGSGLTVSDGAEEVNVITWNPIDPNVSMTWTNIDPL*
Ga0068476_11392481	3300006324	Marine	TVIVTGSGVTVSMGTCTYTMSGSVSPDGSGVTVSTGAADVNVITWNAIDPGVSQSWTNIDPL*
Ga0068476_11472341	3300006324	Marine	GSVSPDGSGVTISTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068501_11193602	3300006325	Marine	PDGSGVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068501_11193612	3300006325	Marine	PTGSELTISTGAEDVNVITWNPIDPNASQTWTAIDPL*
Ga0068477_12153562	3300006326	Marine	SAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068502_12009452	3300006336	Marine	SGVTVSMGTCTYTMSGSVSPDGSGVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL*
Ga0068502_12178893	3300006336	Marine	SVSPTGSAVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL*
Ga0068502_14397512	3300006336	Marine	GSVSPDGSGVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068502_14613851	3300006336	Marine	VSPDGSGLTVSTGAADLNVITWNPIDPGVSQTWTNIDPL*
Ga0068502_15152472	3300006336	Marine	GNELTISTGAEDVNVITWVPIDPDASQTWTNIDPL*
Ga0068482_11929153	3300006338	Marine	SGVTVSMGTVTFTMSGSVSPTGSAVTVSTGAADVNVITWNPIDPDASQTWTNIDPL*
Ga0068482_11929163	3300006338	Marine	VIVTGSGVTASSGTPTFTMSGSVSPTGSAVTVSTGAADVKVLTWNAIDPDASQTWTNIDPL*
Ga0068503_102720911	3300006340	Marine	ITFTISGSVSPDGSGVTISTGAADINVITWNPLDPGVSMTWTNIDPL*
Ga0068503_104537371	3300006340	Marine	TITGSVSPTGSAVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL*
Ga0068503_104757823	3300006340	Marine	ITFTISGSVSPDGSGVTISTGAADINVITWNPIDPGATQTWTNIDPL*
Ga0068503_105983282	3300006340	Marine	IPTGSAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068503_106075301	3300006340	Marine	TPTYTLSALVIPTGSAVTVSTGAADVNVITWNVIDTGVTMEWTNIDPL*
Ga0068503_106613611	3300006340	Marine	MSGSVSPDGSGVTVSTGAADVNVLTWNPIDPDASQTWTNIDPL*
Ga0068493_103026751	3300006341	Marine	ISGSVIPTGSAVTISTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0068493_106201441	3300006341	Marine	GITFTMSGSVSPDGSGVTVSTGAADVNVLTWNAIDPDASQSWTNIDPL*
Ga0068493_107439192	3300006341	Marine	TMTGSVSPDGSGVTVSTGAADVNVITWNPIDPDASQTWTNIDPL*
Ga0068493_107750052	3300006341	Marine	VTGSGVTISMGTVTFTIAGSVAVTGSGLTVSDGAEEVNVITWNPIDPNVSMTWTNIDPL*
Ga0099697_11391211	3300006347	Marine	VIVTGSAVTTSSGTPTYTISGLVIPTGSAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0099697_11744121	3300006347	Marine	SGLTVSDGAEEVNVITWNPIDTDATQTWTNIDPL*
Ga0098033_11711042	3300006736	Marine	VVIVSGSGVTVSENADGITFTMSGSVSPDGSGVTVSTGAGDVNVITWNPIDPDAS
Ga0098048_11108772	3300006752	Marine	ISGTVSPDGSAVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL*
Ga0098039_12647131	3300006753	Marine	TLSATVSPDGSGITISSGAGDVNVITWNVIDTGASQTWTNIDPL*
Ga0098044_11691832	3300006754	Marine	VTGSLCGTVSSGTPTYTISGTVSPDGSAVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL
Ga0110931_10290483	3300007963	Marine	VVTVTGSRVTTSSGTPTYIMSGSVSPDGSRATVSTGAADVNVLTWNAIDPDASQTWTNIDPL*
Ga0098052_13344111	3300008050	Marine	TPTYTISGSVSPTGSAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL*
Ga0114898_10461183	3300008216	Deep Ocean	TVSVTGSGVTVSQNANGITFTMSGSVSPDGSGLTVSTGAADVNVLTWNAIDPGATMTWTNIDPL*
Ga0114898_11736431	3300008216	Deep Ocean	SGTVSPDGSGVTVSSGAADVNVLTWNAIDPDVSMTWTNIDPL*
Ga0115362_1001000951	3300008416	Sediment	TVSMGTPTYTLSGSVSPTGSAVTVSTGAADVNVITWNPIDPDASQTWTNIDPL*
Ga0114902_10255613	3300009413	Deep Ocean	TVAMGTVTFTISGSVSPDGSGLTISTGAADVNVITWNAIDTGATQTWTNIDTL*
Ga0114908_12077801	3300009418	Deep Ocean	SGVTVSDGAEEINVITWNPIDPDASQTWTNIDPL*
Ga0114908_12731072	3300009418	Deep Ocean	GITFTISGSVAPTGSKVTVSTGAADLNVISWNPIDPDASQTWTNIDPL*
Ga0114999_109804661	3300009786	Marine	VSSGTPTYTISGSVSPTGSAVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL*
Ga0105235_1154211	3300009791	Marine Oceanic	ITFTITANIFPTGNELTISTGAEDVNVITWVPIDPDASQTWTNIDPL*
Ga0098056_10381231	3300010150	Marine	GTCTFTMSGSVSPDGSSITISSGAGDVNVITWNAIDPDASQTWTNIDPL*
Ga0164320_102930761	3300013098	Marine Sediment	VTVIVTGSGVTISMGTVTFSIDATVSPDGSGVTVSTGAADVNVITWNPIDPDASQSWTNIDPL*
Ga0181371_10788432	3300017704	Marine	TVTGSGVTISQGTCTYTLSATVSPDGSGITISSGAGDVNVITWNAIDPDASQTWTNIDPL
Ga0211538_10131233	3300020364	Marine	VSPDGSGITISTGAGDVNVITWNPIDPDASQTWTNIDPL
Ga0211660_100530671	3300020373	Marine	VTVTVTGSGVTISQGTCTYTISGSVSPDGSGITISSGAGDVNVITWNPIDPDASQTWTNIDPL
Ga0211637_102932331	3300020398	Marine	YTLTATVSPDGSGVTVSTGAADVNVITWNPIDPDASQTWTNIDPL
Ga0232635_10442423	3300021973	Hydrothermal Vent Fluids	TYTISATVSPDGSGVTVSTGAADVNVITWNPIDTSASQTWTNIDPL
Ga0207900_1199192	3300025029	Marine	DGSGVTVSTGAADVNVITWNPIDPDASQTWTNIDPL
Ga0207891_10451432	3300025044	Marine	PTYTISGSVSPTGSAVTVSSGAADVNVITWNAIDPDASQTWSNIDPL
Ga0207901_10519742	3300025045	Marine	DGSGVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL
Ga0208012_10048491	3300025066	Marine	VSPDGSRATVSTGAADVNVITWNTIDPDASQTWTNIDPL
Ga0207887_10418321	3300025069	Marine	SVSPTGSAVTVSTGAADVNVITWNAIDPDATQTWTNIDPL
Ga0207887_10528952	3300025069	Marine	TISMGTVTFTMSGSVSPDGSGLTVSDGAEEVNVITWNPIDPGVSQTWTNIEPL
Ga0207887_10578881	3300025069	Marine	ANIYPTGNELTISTGAEDVNVITWVPIDPNASQTWTNIDPL
Ga0207887_10735952	3300025069	Marine	TVIVSGSGVTISMGTCTYTISGSVSPDGSGVTVSTGAADVNVLTWNAIDPGVSQTWTNIDPL
Ga0208011_11050062	3300025096	Marine	SPDGSGLTVSTGAADVNVLTWNAIDPDATQTWTNIDPL
Ga0208793_10230713	3300025108	Marine	DGSGLTVSTGAADVNVLTWNAIDPDATQTWTNIDPL
Ga0209434_10991791	3300025122	Marine	GSLCGTVSSGTPTYTMSGSVSPDGSGVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL
Ga0209644_10090353	3300025125	Marine	SQNANGITFTMSGSVSPDGSGVTVSTGAADVNVITWNPIDPDASQTWTNIDPL
Ga0209644_10504281	3300025125	Marine	PTYTLSTTVSPDGSGVTVSTGAADVNVITWNAIDPDASQSWTNIDPL
Ga0209644_11328831	3300025125	Marine	TVSPDGSGVTVSTGAADVNVITWNPIDPDASQTWTNIDPL
Ga0209644_11634131	3300025125	Marine	ISVSFTVTGSGVTISMGTCTYTISGTVSPTGSGVTVSTGAADVNVLTWNAIDPGVSQTWTNIDPL
Ga0207884_10709531	3300025236	Deep Ocean	DGSGVTVSTGAADVNVITWNPIDPDATQTWTNIDPL
Ga0207899_10449972	3300025257	Deep Ocean	TFTISGSVSPTGSAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL
Ga0207876_10223093	3300025259	Deep Ocean	SVSPTGSAVTVSTGAADVNVITWNAIDPDASQTWTNIDPL
Ga0208179_11069732	3300025267	Deep Ocean	SGTVSPDGSGVTVSSGAADVNVLTWNAIDPDVSMTWTNIDPL
Ga0207881_10529461	3300025281	Deep Ocean	VSPTGSAVTVSTGAADVNVITWNVIDPDASQTWTNIDPL
Ga0208450_11264502	3300025301	Deep Ocean	NGITFTISGSVIPTGSAVTISTGAADVNVITWNPIDPDATQTWTNIDPL
Ga0209757_100179411	3300025873	Marine	SVSPDGSGVTVSTGAADVNVLTWNAIDPDASQTWTNIDPL
Ga0209757_101694642	3300025873	Marine	GSGVTISMGTCTYTLSGSVSPDGSGVTVSTGAADVNVITWNAIDPDASQTWTNIDPL
Ga0208406_11511562	3300026205	Marine	VSPDGSGITISSGAGDVNVITWNAIDPDASQTWTNIDPL
Ga0207989_11312541	3300026209	Marine	NASGITFTITGSVAPTGSAIVVSTGASKVNVITWNAIDPNVSGTWTPIDPL
Ga0207990_10679293	3300026262	Marine	PDGSGLTVSTGAADVNVLTWNAIDPDASQTWTNIDPL
Ga0302119_103669142	3300031606	Marine	SGLVIPTGSEVTVSTGAADVNVITWNAIDPDASQTWTNIDPL
Ga0310122_101215051	3300031800	Marine	NANGITFTISGSVSPTGSGVTISTGAADVNVITWNAIDPGATQAWTNIDPL
Ga0310342_1005667213	3300032820	Seawater	ITFVITGTVIPTGSELTISTGAEDVNVITWNPIDPNASQTWTAIDPL
Ga0326756_009449_977_1096	3300034629	Filtered Seawater	VIPTGSGLTVSDGAEEVNVITWNPIDTDATQTWTEIDPL
Ga0326756_023109_626_733	3300034629	Filtered Seawater	GSGVTVSTGAADVNVITWNTIDPDASQTWTNIDPL
Ga0326741_008907_1689_1841	3300034654	Filtered Seawater	MGTCTYTLTATVSPDGSGVTVSTGAADVNVITWNPIDPDASQSWTNIDPL
Ga0326748_004048_1_108	3300034656	Filtered Seawater	GNELTISTGAEDVNVITWVPIDPDASQTWTNIDPL
Ga0326748_007661_1157_1378	3300034656	Filtered Seawater	SQGTPTYDIAATIVVTGSGVAVSMGTVTFTMSGSVAVTGSGVTISDGAEEVNVITWNPIDTGATQTWTNIDPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101350

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences