Metagenome / Metatranscriptome Family F101316

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101316
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	54 residues
Representative Sequence	MIEILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYERPENT
Number of Associated Samples	55
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	38.24 %
% of genes near scaffold ends (potentially truncated)	14.71 %
% of genes from short scaffolds (< 2000 bps)	84.31 %
Associated GOLD sequencing projects	46
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (40.196 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (42.157 % of family members)
Environment Ontology (ENVO)	Unclassified (74.510 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.176 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 67.92% β-sheet: 0.00% Coil/Unstructured: 32.08%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13640	2OG-FeII_Oxy_3	3.92
PF13759	2OG-FeII_Oxy_5	3.92
PF01467	CTP_transf_like	3.92
PF01844	HNH	1.96
PF07669	Eco57I	0.98
PF13884	Peptidase_S74	0.98
PF02700	PurS	0.98
PF00111	Fer2	0.98
PF00156	Pribosyltran	0.98
PF06868	DUF1257	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.78 %
Unclassified	root	N/A	38.24 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	0.98 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	53.92 %
Unclassified	root	N/A	38.24 %
cellular organisms	root	All Organisms → cellular organisms	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.20 %
Unclassified	root	N/A	38.24 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	10.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.20 %
Unclassified	root	N/A	38.24 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	10.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.20 %
Unclassified	root	N/A	38.24 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	10.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.20 %
Unclassified	root	N/A	38.24 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10.78 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.20 %
Unclassified	root	N/A	38.24 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	9.80 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.20 %
Unclassified	root	N/A	38.24 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	9.80 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.20 %
Unclassified	root	N/A	38.24 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	9.80 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	40.20 %
Unclassified	root	N/A	38.24 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	9.80 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	6.86 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002231\|KVRMV2_101429204	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	838	Open in IMG/M
3300002242\|KVWGV2_10036974	unclassified Hyphomonas → Hyphomonas sp.	812	Open in IMG/M
3300002242\|KVWGV2_10243163	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	518	Open in IMG/M
3300005404\|Ga0066856_10344571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	640	Open in IMG/M
3300006024\|Ga0066371_10040500	All Organisms → Viruses → Predicted Viral	1326	Open in IMG/M
3300006024\|Ga0066371_10062269	All Organisms → Viruses → Predicted Viral	1086	Open in IMG/M
3300006024\|Ga0066371_10179691	Not Available	654	Open in IMG/M
3300006327\|Ga0068499_1091309	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	852	Open in IMG/M
3300006329\|Ga0068486_1358024	All Organisms → Viruses → Predicted Viral	1352	Open in IMG/M
3300006332\|Ga0068500_1184473	All Organisms → Viruses → Predicted Viral	2168	Open in IMG/M
3300006332\|Ga0068500_1276935	All Organisms → Viruses → Predicted Viral	1756	Open in IMG/M
3300006332\|Ga0068500_1306184	All Organisms → Viruses	923	Open in IMG/M
3300006332\|Ga0068500_1308781	All Organisms → Viruses → Predicted Viral	1846	Open in IMG/M
3300006332\|Ga0068500_1408159	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300006332\|Ga0068500_1429140	All Organisms → Viruses → Predicted Viral	1175	Open in IMG/M
3300006332\|Ga0068500_1812844	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	536	Open in IMG/M
3300006412\|Ga0099955_1053306	All Organisms → Viruses → Predicted Viral	1990	Open in IMG/M
3300006478\|Ga0100224_1474415	Not Available	606	Open in IMG/M
3300006565\|Ga0100228_1028426	All Organisms → Viruses → Predicted Viral	1363	Open in IMG/M
3300006565\|Ga0100228_1042524	All Organisms → Viruses → Predicted Viral	1615	Open in IMG/M
3300006565\|Ga0100228_1064692	All Organisms → Viruses → Predicted Viral	3577	Open in IMG/M
3300006565\|Ga0100228_1177571	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300006565\|Ga0100228_1188880	All Organisms → Viruses → Predicted Viral	1260	Open in IMG/M
3300006565\|Ga0100228_1290065	Not Available	801	Open in IMG/M
3300006565\|Ga0100228_1290319	All Organisms → Viruses	739	Open in IMG/M
3300006565\|Ga0100228_1337124	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	990	Open in IMG/M
3300006565\|Ga0100228_1476964	Not Available	576	Open in IMG/M
3300007336\|Ga0079245_1244093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	528	Open in IMG/M
3300008097\|Ga0111541_10007988	All Organisms → Viruses → Predicted Viral	3776	Open in IMG/M
3300008097\|Ga0111541_10080002	All Organisms → Viruses → Predicted Viral	1302	Open in IMG/M
3300008097\|Ga0111541_10386033	Not Available	607	Open in IMG/M
3300009481\|Ga0114932_10575532	Not Available	660	Open in IMG/M
3300009481\|Ga0114932_10691871	Not Available	594	Open in IMG/M
3300009593\|Ga0115011_10244706	All Organisms → Viruses → Predicted Viral	1343	Open in IMG/M
3300009679\|Ga0115105_10577718	Not Available	978	Open in IMG/M
3300009679\|Ga0115105_11079459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	565	Open in IMG/M
3300009679\|Ga0115105_11325275	Not Available	619	Open in IMG/M
3300009790\|Ga0115012_10100625	All Organisms → Viruses → Predicted Viral	2022	Open in IMG/M
3300009790\|Ga0115012_10642939	Not Available	845	Open in IMG/M
3300009794\|Ga0105189_1005321	All Organisms → Viruses → Predicted Viral	1196	Open in IMG/M
3300009794\|Ga0105189_1031515	Not Available	527	Open in IMG/M
3300009794\|Ga0105189_1031618	Not Available	526	Open in IMG/M
3300011013\|Ga0114934_10187471	Not Available	963	Open in IMG/M
3300012920\|Ga0160423_10624329	Not Available	729	Open in IMG/M
3300012952\|Ga0163180_10519314	Not Available	893	Open in IMG/M
3300012952\|Ga0163180_11334164	Not Available	592	Open in IMG/M
3300012952\|Ga0163180_11433073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	574	Open in IMG/M
3300012952\|Ga0163180_11517399	Not Available	561	Open in IMG/M
3300012954\|Ga0163111_10375158	All Organisms → Viruses → Predicted Viral	1284	Open in IMG/M
3300017746\|Ga0181389_1141888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	643	Open in IMG/M
3300017764\|Ga0181385_1137649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	743	Open in IMG/M
3300020249\|Ga0211635_1039008	Not Available	787	Open in IMG/M
3300020250\|Ga0211627_1054356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	642	Open in IMG/M
3300020255\|Ga0211586_1009381	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2024	Open in IMG/M
3300020259\|Ga0211633_1020266	All Organisms → Viruses → Predicted Viral	1176	Open in IMG/M
3300020294\|Ga0211520_1008977	All Organisms → Viruses → Predicted Viral	1650	Open in IMG/M
3300020294\|Ga0211520_1054438	Not Available	636	Open in IMG/M
3300020310\|Ga0211515_1036805	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	947	Open in IMG/M
3300020311\|Ga0211628_1030424	Not Available	913	Open in IMG/M
3300020343\|Ga0211626_1044047	All Organisms → Viruses → Predicted Viral	1154	Open in IMG/M
3300020345\|Ga0211706_1010986	All Organisms → Viruses → Predicted Viral	2156	Open in IMG/M
3300020360\|Ga0211712_10165617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	543	Open in IMG/M
3300020395\|Ga0211705_10074820	All Organisms → Viruses → Predicted Viral	1221	Open in IMG/M
3300020395\|Ga0211705_10082298	All Organisms → Viruses → Predicted Viral	1163	Open in IMG/M
3300020395\|Ga0211705_10106760	All Organisms → Viruses → Predicted Viral	1017	Open in IMG/M
3300020395\|Ga0211705_10274932	Not Available	623	Open in IMG/M
3300020395\|Ga0211705_10320343	Not Available	575	Open in IMG/M
3300020405\|Ga0211496_10208780	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	725	Open in IMG/M
3300020411\|Ga0211587_10067428	All Organisms → Viruses → Predicted Viral	1597	Open in IMG/M
3300020413\|Ga0211516_10294354	Not Available	730	Open in IMG/M
3300020419\|Ga0211512_10075470	All Organisms → Viruses → Predicted Viral	1594	Open in IMG/M
3300020428\|Ga0211521_10231882	Not Available	835	Open in IMG/M
3300020438\|Ga0211576_10654494	Not Available	518	Open in IMG/M
3300020445\|Ga0211564_10027636	All Organisms → Viruses → Predicted Viral	2836	Open in IMG/M
3300020445\|Ga0211564_10105217	All Organisms → Viruses → Predicted Viral	1407	Open in IMG/M
3300020445\|Ga0211564_10191239	All Organisms → Viruses → Predicted Viral	1015	Open in IMG/M
3300020445\|Ga0211564_10507875	Not Available	590	Open in IMG/M
3300020455\|Ga0211664_10028974	All Organisms → Viruses → Predicted Viral	2715	Open in IMG/M
3300020455\|Ga0211664_10372723	Not Available	658	Open in IMG/M
3300020457\|Ga0211643_10137368	All Organisms → Viruses → Predicted Viral	1205	Open in IMG/M
3300020457\|Ga0211643_10163668	All Organisms → Viruses → Predicted Viral	1096	Open in IMG/M
3300020465\|Ga0211640_10572235	Not Available	611	Open in IMG/M
3300020470\|Ga0211543_10402164	Not Available	657	Open in IMG/M
3300020471\|Ga0211614_10225725	Not Available	814	Open in IMG/M
3300020472\|Ga0211579_10002916	All Organisms → Viruses	12729	Open in IMG/M
3300020472\|Ga0211579_10013882	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5370	Open in IMG/M
3300020472\|Ga0211579_10111036	All Organisms → Viruses → Predicted Viral	1637	Open in IMG/M
3300020472\|Ga0211579_10134191	All Organisms → Viruses → Predicted Viral	1465	Open in IMG/M
3300020472\|Ga0211579_10244271	All Organisms → Viruses → Predicted Viral	1033	Open in IMG/M
3300020476\|Ga0211715_10347194	Not Available	727	Open in IMG/M
3300025132\|Ga0209232_1031853	All Organisms → Viruses → Predicted Viral	2014	Open in IMG/M
3300026076\|Ga0208261_1002786	Not Available	6001	Open in IMG/M
3300026076\|Ga0208261_1007856	All Organisms → Viruses → Predicted Viral	3398	Open in IMG/M
3300026076\|Ga0208261_1094983	Not Available	780	Open in IMG/M
3300026076\|Ga0208261_1145164	Not Available	599	Open in IMG/M
3300026077\|Ga0208749_1049515	Not Available	885	Open in IMG/M
3300026077\|Ga0208749_1069377	Not Available	739	Open in IMG/M
3300027906\|Ga0209404_10000639	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	26838	Open in IMG/M
3300029787\|Ga0183757_1007698	All Organisms → Viruses → Predicted Viral	3319	Open in IMG/M
3300032006\|Ga0310344_10005426	Not Available	9485	Open in IMG/M
3300032006\|Ga0310344_10939810	Not Available	728	Open in IMG/M
3300032047\|Ga0315330_10749182	Not Available	565	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	49.02%
Unclassified	Environmental → Aquatic → Marine → Unclassified	42.16%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.94%
Volcanic	Environmental → Aquatic → Marine → Volcanic	2.94%
Strait	Environmental → Aquatic → Marine → Strait	1.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	42.16%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	27.45%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	20.59%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	2.94%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.96%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.98%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	42.16%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	18.63%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	18.63%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.92%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	2.94%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	2.94%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	2.94%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.96%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.96%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.96%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.98%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300006024	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B	Environmental	Open in IMG/M
3300006327	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0125m	Environmental	Open in IMG/M
3300006329	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0500m	Environmental	Open in IMG/M
3300006332	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200m	Environmental	Open in IMG/M
3300006412	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0125m	Environmental	Open in IMG/M
3300006478	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0125m	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300007336	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S7 DCM_A metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300009794	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3438_5245	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300020249	Marine microbial communities from Tara Oceans - TARA_B100000482 (ERX556038-ERR599056)	Environmental	Open in IMG/M
3300020250	Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX555986-ERR599129)	Environmental	Open in IMG/M
3300020255	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556136-ERR599013)	Environmental	Open in IMG/M
3300020259	Marine microbial communities from Tara Oceans - TARA_B100000482 (ERX556041-ERR599103)	Environmental	Open in IMG/M
3300020294	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153)	Environmental	Open in IMG/M
3300020310	Marine microbial communities from Tara Oceans - TARA_X000000368 (ERX556067-ERR598950)	Environmental	Open in IMG/M
3300020311	Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX556071-ERR599171)	Environmental	Open in IMG/M
3300020343	Marine microbial communities from Tara Oceans - TARA_B100000475 (ERX555975-ERR599174)	Environmental	Open in IMG/M
3300020345	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX556079-ERR599137)	Environmental	Open in IMG/M
3300020360	Marine microbial communities from Tara Oceans - TARA_B100000459 (ERX555918-ERR599165)	Environmental	Open in IMG/M
3300020395	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020465	Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020476	Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300026076	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026077	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KVRMV2_1014292042	3300002231	Marine Sediment	MLEILLATSLLTCESSQEIVDGIIKSKVSSREELIEVIKENTEPACYERPENT*
KVWGV2_100369741	3300002242	Marine Sediment	MIELLAASLLTCESGQEIIDNLNKSNPLHREELIEVIKENSEPHC
KVWGV2_102431633	3300002242	Marine Sediment	MIEILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYERPENT**KS
Ga0066856_103445712	3300005404	Marine	MIEILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYERPENT*
Ga0066371_100405002	3300006024	Marine	MIEILLASSLFTCESSQEIVDNINKSRPAHKEELIEVIKENTEPTCYERSEHDT*
Ga0066371_100622691	3300006024	Marine	INNDMIEILLATSLLTCESSQKIVDSIIKSQVASREDLIEVIKENTEPTCYERPEHNS*
Ga0066371_101796913	3300006024	Marine	MIEILLASSLFTCESSQEIVDNITKSNPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0068499_10913092	3300006327	Marine	MIEILLASSLLTCESSQEIIEDIIKSNPAHKEELIEVIKENTEPTCYERPEHDT*
Ga0068486_13580243	3300006329	Marine	MIEILLASSLLTCESSQEIIDDIIKANPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0068500_11844735	3300006332	Marine	MIEILLASSLLTCESSQEIIDDIIKARPAHKEELIEVIKENTEPTCYERPEHDT*
Ga0068500_12769353	3300006332	Marine	MIEILLATSLLTCESSQEIVDGIIKSKVASREELIEVIKENTEPACYERPENT*
Ga0068500_13061843	3300006332	Marine	MIEILLATSLLTCEDSQEIVDGIIKSKVASREELIEVIKENTEPTCYERPENT*
Ga0068500_13087814	3300006332	Marine	MIEILLASSLLTCESSQEIIDDIIKARPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0068500_14081592	3300006332	Marine	MIEILLVSSLFTCESSQEIVDNIIKSNPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0068500_14291403	3300006332	Marine	MIEILLASSLLTCESSQEIVDNITKSNPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0068500_18128442	3300006332	Marine	MLEILLATSLLTCESSQEIVDGIIKSKVASREELIEVIKENTEPACYERPENT*
Ga0099955_10533067	3300006412	Marine	MIEILLASSLLTCESSQEIIDNITKSNPAHKEELIEVIKENTEPTCYERPEHDT*
Ga0100224_14744152	3300006478	Marine	MIEILLATSLLTCESSQEIVDGIIKSQVESKEELIEVIKENTEPTCYDRPEINT*
Ga0100228_10284262	3300006565	Marine	MIEILLATSLLTCESSQEIVDGIIKSQVESKEELIEVIKENTEPTCYERSEDT*
Ga0100228_10425246	3300006565	Marine	MIEILLATSLFTCEASQEIVDGIIKSKVASREELIEVIKENTEPACYERPENT*
Ga0100228_106469212	3300006565	Marine	MIEILLASSLLTCESSQEIVDNITKSNPAHKEELIEVIKLNTESECYERPEHDT*
Ga0100228_11775713	3300006565	Marine	MIEILLASSLLTCESSQEIVDNIIKSNPAHKEELIEVIKENTEPECYERPEHNS*
Ga0100228_11888802	3300006565	Marine	MIEILLASSLLTCESSQEIIDDIIKSRPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0100228_12900653	3300006565	Marine	MIEILLATSLFTCESSQEIVEGIMKSQQSSVDKEALFEVIKLNTEPTCYERPEHNS*
Ga0100228_12903192	3300006565	Marine	MIEILLATSLLTCEASQKIVDGIIKSQVESREELIEVIKENTEPTCYERPENT*
Ga0100228_13371243	3300006565	Marine	MLEILLATSLLTCEASQEIVDGIIKSKVASREELIEVIKENTEPACYERPENT*
Ga0100228_14769642	3300006565	Marine	MIMIEILLASSLFTCESSQEIVDNITKSNPAHKEELIEVIKENTEPTCYERPENT*
Ga0079245_12440932	3300007336	Marine	MIEILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPACYERPENT*
Ga0111541_100079883	3300008097	Marine	MIEIFLATSLLTCESSQEIVDGIIKSKVVSREELIEVIKENTEPTCYERPENT*
Ga0111541_100800022	3300008097	Marine	MIEILLASSLLTCESSQEIVDDIIRANPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0111541_103860331	3300008097	Marine	MIEILLATSFLTCESSQEIVDGIIKSQVESKEELIEVIKENTEPTCYDRPEINT*
Ga0114932_105755322	3300009481	Deep Subsurface	MIEILLASSLLTCESSQEIVDDIIRSNPAHKQELIEVIKENTEPTCYERPEHNS*
Ga0114932_106918711	3300009481	Deep Subsurface	EILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYDRTELDT*
Ga0115011_102447063	3300009593	Marine	MIEILLVSSLFTCESSQEIVDNIIKSKPAHKEELIEVIKENTEPECYERPEHNS*
Ga0115105_105777182	3300009679	Marine	MIEILLVSSLFTCESSQEIVDNIIKSNPAHKEELIEVIKENTEPECYERSEHDT*
Ga0115105_110794592	3300009679	Marine	MLEILLATSLFTCEASQEIVDGIIKSKVASREELIEVIKENTEP
Ga0115105_113252751	3300009679	Marine	MIEILLASSLLTCESSQEIIDDIIKARPAHKEELIEVIKENTEPTCYERSEHDT*
Ga0115012_101006253	3300009790	Marine	MIEILLATSLFTCESSQEIVDGIMKYQKSSVDKEALVEVIKLNTEPTCYERPEHNS*
Ga0115012_106429393	3300009790	Marine	MIEILLASSLLTCESSQEIIDDIIKSNPAHKEELIEVIKENTEPECYERPEHNS*
Ga0105189_10053212	3300009794	Marine Oceanic	MIEILLATSLLTCESSQEIVDGIIKSKVASREELIEVIKENTEPTCYERPENT*
Ga0105189_10315151	3300009794	Marine Oceanic	LGGYKMIEILLASSLLTCESSQEIIDDIIKSNPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0105189_10316182	3300009794	Marine Oceanic	MLEILLATSLFTCEASQEIVDGIIKSKVVSREELIEVIKENTEPACYERPENT*
Ga0114934_101874711	3300011013	Deep Subsurface	LGGYKMIEILLASSLLTCESSQEIVDDIIRANPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0160423_106243291	3300012920	Surface Seawater	MIEILLASSLLTCESSQEIVDNITKSNPAHKEELIEVIKENTEPTCYESERSDSLHPT*
Ga0163180_105193141	3300012952	Seawater	MIEILLASSLLTCESSQEIIDDIIKARPAHKEELIEVIKENTEPECYGSEQGDSSST*
Ga0163180_113341642	3300012952	Seawater	MIEILLASSLLTCESSQEIVDDIIRANPAHKEELIEVIKENTELTCYERPEHNS*
Ga0163180_114330732	3300012952	Seawater	MIEILLATSLLTCESSQEIVDSIIRSKVESREELIEVVKENTEPTCYERPENT*
Ga0163180_115173992	3300012952	Seawater	MIEILLATSLLTCESSQEIVDGIIKSNVESKEELIEVIKENTEPTCYDRPEIST*
Ga0163111_103751584	3300012954	Surface Seawater	MIEILLVSSLFTCESSQEIVDNITKSNPAHKEELIEVIKENTEPTCYERPEHNS*
Ga0181389_11418882	3300017746	Seawater	MIEILLATSLLTCESSQEIVDGIIKSNVVSREELIEVIKENTEPTCYERP
Ga0181385_11376492	3300017764	Seawater	MIEILLVSSLFTCESSQEIVDNIIKSNPAHKEELIEVIKENTEPECYERSEHDT
Ga0211635_10390082	3300020249	Marine	MLEILLATSLLTCESSQEIVDGIIKSKVVSREELIEVIKENTEPTCYERPENT
Ga0211627_10543563	3300020250	Marine	MLEILLATSLLTCESSQEIVDGIIKSKVSSREELIEVIKENTEPACYERPKNT
Ga0211586_10093814	3300020255	Marine	MIEILLATSLLTCESSQEIVDGIIKSKVASREELIEVIKENTEPTCYERPENT
Ga0211633_10202662	3300020259	Marine	MIEILLATSLLTCESSQEIVDGIIKSQVESKEELIEVIKENTEPTCYDRPEINT
Ga0211520_10089774	3300020294	Marine	MIEILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYD
Ga0211520_10544382	3300020294	Marine	MLEILLATSLLTCESSQEIVDGIIKSKVSSREELIEVIKENTEPACYERPENT
Ga0211515_10368052	3300020310	Marine	MIEILLASSLLTCDSSQEIVDDIIRSNPAHKEELIEVIKENTEPTCYERPEHNS
Ga0211628_10304243	3300020311	Marine	MLEILLATSLLTCESSQEIVDDIIKSKVSSREELIEVIKENTEPACYERPKNT
Ga0211626_10440474	3300020343	Marine	MLEILLATSLLTCESSQEIVDDIIKSKVSSREELIEVIKENTEPTCYERPENT
Ga0211706_10109866	3300020345	Marine	MIEILLATSLLTCESSQKIVDSIIKSQVASREDLIEVIKENTEPTCYERPEHNS
Ga0211712_101656172	3300020360	Marine	MIEILLATSLLTCESSQEIVDGIIKSNVVSREELIEVIKENTEPTCYERPENT
Ga0211705_100748202	3300020395	Marine	MIEILLASSLLTCESSQEIIEDIIKSNPAHKEELIEVIKENTEPTCYERPEHNS
Ga0211705_100822983	3300020395	Marine	MIEILLVSSLFTCESSQEIVDNITKSNPAHKEELIEVIKENTEPTCYERPEHNS
Ga0211705_101067601	3300020395	Marine	MIEILLATSFLTCESSQEIVDGIIKSQVESKEELIEVIKENTEPTCYDRPEINT
Ga0211705_102749322	3300020395	Marine	MIEILLATSLLTCESSQEIVDSIIRSKVESREELIEVVKENTEPTCYERPENT
Ga0211705_103203432	3300020395	Marine	MLEILLATSLFTCEASQEIVDGIIKSKVVSREELIEVIKENTEPACYERPENT
Ga0211496_102087801	3300020405	Marine	MIEILLASSLLTCESSQEIIDDIIKARPAHKEELIEVIKENTEPKCYERPEHNS
Ga0211587_100674281	3300020411	Marine	MIEILLASSLLTCESSQEIVDDIIRSNPTHKEELIEVIKENTEPECYERPEHNS
Ga0211516_102943543	3300020413	Marine	MIEILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYDRTELDT
Ga0211512_100754704	3300020419	Marine	MIEILLASSLLTCESSQEIVDDIIRSNPAHKQELIEVIKENTEPTCYERPEHNS
Ga0211521_102318821	3300020428	Marine	MLEILLATSLLTCESSQEIVDGIIKSKVVSREELIEVIKENTEPTCY
Ga0211576_106544941	3300020438	Marine	LATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYERPENT
Ga0211564_100276369	3300020445	Marine	MIEFILASTLLTCEGSYELAEKIRKSSQTPNKEELIEVIKANTEPECYGSEQGDSSST
Ga0211564_101052172	3300020445	Marine	MIEILLATSLFTCESSQKIVDSIIRSQVESREDLIEVIKENTEPTCYERPEHNS
Ga0211564_101912392	3300020445	Marine	MIEILLATSLFTCESSQEIVDGIIKSKVASREELIEVIKENTEPTCYERPENT
Ga0211564_105078752	3300020445	Marine	MIEILLASSLLTCESSQEIIDDIIKARPAHKEELIEVIKENTEPECYGSEQGDSSST
Ga0211664_100289745	3300020455	Marine	MLEILLATSLFTCEASQEIVDGIIKSKVASREELIEVIKENTEPTCYERPENT
Ga0211664_103727232	3300020455	Marine	MIEILLATSLLTCESSQRIVDGIIKSKVETREELIEVIKENTEPTCYERPENT
Ga0211643_101373683	3300020457	Marine	MIEILLATSLLTCESSQEIVDGIIKSKVASREELIEVIKENTEPTCYERSKDT
Ga0211643_101636682	3300020457	Marine	MIEILLVSSLFTCESSQEIVDNITKSNPAHKEELIEVIKENTEPKCYERPEHDT
Ga0211640_105722351	3300020465	Marine	MIEILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYERPENT
Ga0211543_104021641	3300020470	Marine	INNSMIEILLATSLLTCESSQEIVDGIIKSKVASREELIEVIKENTEPTCYERPENT
Ga0211614_102257253	3300020471	Marine	MIEILLATSLLTCESSQKIVDSIIKSKVASREELIEVIKQNTEPTCYERPENT
Ga0211579_1000291616	3300020472	Marine	LGGYIINNIMIEILLATSLLTCESSQKIVDSIIRSQVASREDLIEVVKENTEPACYERSEDTG
Ga0211579_1001388213	3300020472	Marine	MIEILLATSLLTCESSQEIVDGIIKSNVASREDLIEVIKENTEPTCYERSEHNS
Ga0211579_101110363	3300020472	Marine	MLEILLATSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYERPENT
Ga0211579_101341913	3300020472	Marine	MIEILLVSALLTCESSQEIIDDIIKARPAHKEELIEVIKENTEPTCYERSEHDT
Ga0211579_102442713	3300020472	Marine	MIEILLASSLLTCESSQEIVDDIIKARPAHKEELIEVIKENTEPECYGSEQGDSSST
Ga0211715_103471942	3300020476	Marine	MLEILLATSLLTCESSQEIVDGIIKSKVSSREELIEVIKENTEPTCYERPENT
Ga0209232_10318533	3300025132	Marine	MIEILLASSLLTCESSQEIVDGIIKSNVASREELIEVIKENTEPTCYERPENT
Ga0208261_10027869	3300026076	Marine	MIEIFLATSLLTCESSQEIVDGIIKSKVVSREELIEVIKENTEPTCYERPENT
Ga0208261_10078563	3300026076	Marine	MIEILLATSLFTCEASQEIVDGIIKSKVASREELIEVIKENTEPACYERPENT
Ga0208261_10949832	3300026076	Marine	MLEILLATSLFTCESSQEIVDGIIKSKVASREELIEVIKENTEPACYERPENT
Ga0208261_11451642	3300026076	Marine	MIEILLASSLLTCESSQEIVDDIIRANPAHKEELIEVIKENTEPTCYERPEHNS
Ga0208749_10495152	3300026077	Marine	MIEILLASSLFTCESSQEIVDNITKSNPAHKEELIEVIKENTEPTCYERPEHNS
Ga0208749_10693773	3300026077	Marine	MIEILLASSLFTCESSQEIVDNINKSRPAHKEELIEVIKENTEPTCYERSEHDT
Ga0209404_1000063919	3300027906	Marine	MIEILLVSSLFTCESSQEIVDNIIKSKPAHKEELIEVIKENTEPECYERPEHNS
Ga0183757_10076981	3300029787	Marine	MIELLAASLLTCESGQEIIDNLNKSKPLHREELIEVIKENSEPHCF
Ga0310344_1000542611	3300032006	Seawater	MIEILLASSLLTCESSQEIIEDIIKSNPAHKEELIEVIKENTEPTCYERPEHDT
Ga0310344_109398103	3300032006	Seawater	MLEILLATSLFTCEASQEIVDGIIKSKVASREELIEVIKENTEPACYERPENT
Ga0315330_107491821	3300032047	Seawater	MIEILLASSLLTCESSQDIVDDIIRANPAHKEELIEVIKENTEPTCYERPEHNS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101316

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences