Metagenome / Metatranscriptome Family F100920

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100920
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	63 residues
Representative Sequence	MNPNFNWAIVAERMQALQTEADTAARARHAARIRRGTARARLARSYRRVLAFAPAGSGR
Number of Associated Samples	71
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.04 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.745 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.137 % of family members)
Environment Ontology (ENVO)	Unclassified (53.922 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.32% β-sheet: 0.00% Coil/Unstructured: 43.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF03795	YCII	43.14
PF00378	ECH_1	23.53
PF08281	Sigma70_r4_2	4.90
PF04542	Sigma70_r2	2.94
PF07287	AtuA	0.98
PF05199	GMC_oxred_C	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	43.14
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.94
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.94
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.94
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.94
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.75 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	61.76 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.88 %
Unclassified	root	N/A	37.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.25 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100695356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	815	Open in IMG/M
3300005332\|Ga0066388_102050196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1027	Open in IMG/M
3300005332\|Ga0066388_102564916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	928	Open in IMG/M
3300005332\|Ga0066388_103422036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	810	Open in IMG/M
3300005332\|Ga0066388_104220615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	732	Open in IMG/M
3300005363\|Ga0008090_15841585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	806	Open in IMG/M
3300005435\|Ga0070714_100070726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3016	Open in IMG/M
3300005536\|Ga0070697_100327174	Not Available	1321	Open in IMG/M
3300005764\|Ga0066903_101015384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1518	Open in IMG/M
3300005764\|Ga0066903_101061796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1488	Open in IMG/M
3300005764\|Ga0066903_101451305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1292	Open in IMG/M
3300005764\|Ga0066903_104434597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	749	Open in IMG/M
3300005764\|Ga0066903_105881843	Not Available	643	Open in IMG/M
3300005764\|Ga0066903_106191794	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005764\|Ga0066903_108474629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300005764\|Ga0066903_108474635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300006755\|Ga0079222_10354090	Not Available	994	Open in IMG/M
3300006755\|Ga0079222_11340426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300006804\|Ga0079221_10059094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1749	Open in IMG/M
3300006804\|Ga0079221_10516795	Not Available	780	Open in IMG/M
3300006852\|Ga0075433_10699232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	888	Open in IMG/M
3300009162\|Ga0075423_10094210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3129	Open in IMG/M
3300010046\|Ga0126384_10171097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1692	Open in IMG/M
3300010047\|Ga0126382_10741566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300010048\|Ga0126373_11970294	Not Available	647	Open in IMG/M
3300010048\|Ga0126373_12297798	Not Available	600	Open in IMG/M
3300010358\|Ga0126370_10575130	All Organisms → cellular organisms → Bacteria → Terrabacteria group	967	Open in IMG/M
3300010358\|Ga0126370_11749815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300010359\|Ga0126376_10715254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	966	Open in IMG/M
3300010359\|Ga0126376_13199894	Not Available	506	Open in IMG/M
3300010360\|Ga0126372_12989328	All Organisms → cellular organisms → Bacteria → Terrabacteria group	524	Open in IMG/M
3300010360\|Ga0126372_13315634	Not Available	501	Open in IMG/M
3300010361\|Ga0126378_12736255	Not Available	563	Open in IMG/M
3300010366\|Ga0126379_10721169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1092	Open in IMG/M
3300010376\|Ga0126381_100470354	Not Available	1767	Open in IMG/M
3300010376\|Ga0126381_100738112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1410	Open in IMG/M
3300010398\|Ga0126383_12444688	Not Available	607	Open in IMG/M
3300010398\|Ga0126383_12729476	Not Available	576	Open in IMG/M
3300015371\|Ga0132258_11617677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1635	Open in IMG/M
3300016357\|Ga0182032_11322509	All Organisms → cellular organisms → Bacteria → Terrabacteria group	623	Open in IMG/M
3300016371\|Ga0182034_11225791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300016404\|Ga0182037_10693119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300021560\|Ga0126371_11376529	All Organisms → cellular organisms → Bacteria → Terrabacteria group	837	Open in IMG/M
3300021560\|Ga0126371_11399989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300025922\|Ga0207646_10945725	Not Available	763	Open in IMG/M
3300025928\|Ga0207700_10012413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5494	Open in IMG/M
3300027725\|Ga0209178_1273119	Not Available	616	Open in IMG/M
3300027765\|Ga0209073_10149519	All Organisms → cellular organisms → Bacteria → Terrabacteria group	861	Open in IMG/M
3300027874\|Ga0209465_10256345	Not Available	875	Open in IMG/M
3300031543\|Ga0318516_10505263	Not Available	693	Open in IMG/M
3300031543\|Ga0318516_10520491	Not Available	682	Open in IMG/M
3300031544\|Ga0318534_10044759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2465	Open in IMG/M
3300031544\|Ga0318534_10265464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	989	Open in IMG/M
3300031544\|Ga0318534_10688354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300031544\|Ga0318534_10775148	Not Available	539	Open in IMG/M
3300031546\|Ga0318538_10166440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1169	Open in IMG/M
3300031561\|Ga0318528_10056933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1988	Open in IMG/M
3300031573\|Ga0310915_10340816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300031668\|Ga0318542_10426451	Not Available	686	Open in IMG/M
3300031668\|Ga0318542_10538252	Not Available	608	Open in IMG/M
3300031680\|Ga0318574_10165139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300031680\|Ga0318574_10848273	Not Available	535	Open in IMG/M
3300031681\|Ga0318572_10422152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300031681\|Ga0318572_10588115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300031682\|Ga0318560_10192510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1088	Open in IMG/M
3300031708\|Ga0310686_101471342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3437	Open in IMG/M
3300031723\|Ga0318493_10776030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300031744\|Ga0306918_11425097	Not Available	531	Open in IMG/M
3300031747\|Ga0318502_10296844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300031751\|Ga0318494_10366467	Not Available	834	Open in IMG/M
3300031764\|Ga0318535_10567369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300031770\|Ga0318521_10725144	Not Available	604	Open in IMG/M
3300031771\|Ga0318546_11265389	Not Available	518	Open in IMG/M
3300031780\|Ga0318508_1199711	Not Available	573	Open in IMG/M
3300031782\|Ga0318552_10742056	All Organisms → cellular organisms → Bacteria → Terrabacteria group	501	Open in IMG/M
3300031793\|Ga0318548_10480555	Not Available	608	Open in IMG/M
3300031795\|Ga0318557_10508200	Not Available	553	Open in IMG/M
3300031798\|Ga0318523_10594203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300031831\|Ga0318564_10310350	Not Available	695	Open in IMG/M
3300031890\|Ga0306925_10144792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2555	Open in IMG/M
3300031894\|Ga0318522_10405912	Not Available	516	Open in IMG/M
3300031942\|Ga0310916_11200140	Not Available	627	Open in IMG/M
3300031954\|Ga0306926_12311076	Not Available	595	Open in IMG/M
3300032001\|Ga0306922_10315038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1680	Open in IMG/M
3300032001\|Ga0306922_11676548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	630	Open in IMG/M
3300032009\|Ga0318563_10449534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300032009\|Ga0318563_10704070	Not Available	542	Open in IMG/M
3300032010\|Ga0318569_10337165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	702	Open in IMG/M
3300032039\|Ga0318559_10316756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300032041\|Ga0318549_10016590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2709	Open in IMG/M
3300032055\|Ga0318575_10164153	Not Available	1108	Open in IMG/M
3300032064\|Ga0318510_10449167	Not Available	553	Open in IMG/M
3300032065\|Ga0318513_10037201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2131	Open in IMG/M
3300032067\|Ga0318524_10353775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	763	Open in IMG/M
3300032067\|Ga0318524_10712170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300032076\|Ga0306924_12389711	Not Available	533	Open in IMG/M
3300032089\|Ga0318525_10208302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1005	Open in IMG/M
3300032089\|Ga0318525_10291689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300032261\|Ga0306920_100702563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1490	Open in IMG/M
3300032261\|Ga0306920_101112280	Not Available	1145	Open in IMG/M
3300033289\|Ga0310914_10584846	Not Available	1007	Open in IMG/M
3300033290\|Ga0318519_10296801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	945	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.06%
Plants	Host-Associated → Plants	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.39%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1006953561	3300004479	Soil	MLEEDTVNPNFNYAIVAERMQTLQAEADQAARTRHAARIRRGTARARLARRYRRVLAFAPAGSGR*
Ga0066388_1020501962	3300005332	Tropical Forest Soil	MNPNFNWAIVAERMHALQAEADTAARARHAARVRRGTLRARLARRSRRGLAFAPAGPRR*
Ga0066388_1025649161	3300005332	Tropical Forest Soil	AIVAERMQSLQDEAATAARARHATPIRRAADRARQARRSRRWLVFAPAGSAGSTRAPLA*
Ga0066388_1034220362	3300005332	Tropical Forest Soil	MNPNFNRAIVAERMQTLQAEAATAARARTAPRGRHLPAHARQARRSRRWLAFAPAGSGR*
Ga0066388_1042206152	3300005332	Tropical Forest Soil	MNPNFNYAMVAERMQTRQAEADVARTRRAARIRHGTVRARLARRTHRGLVLAPAGSSR*
Ga0008090_158415852	3300005363	Tropical Rainforest Soil	MNPNFTWAIVAERMQTMQAEADTAARARQAARIRRGTARTRLARRYRSVLAFAPAGSGR*
Ga0070714_1000707263	3300005435	Agricultural Soil	MNPNFNWAIIAERMQTLQTEADTAARARHAAGVRRGTARARLGRRSRRGLAFAPAGSGR*
Ga0070697_1003271742	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNPNFNWAIVAERMQALQAEADTATRARHAARIRRSTASARQARRPRRWLAFAPAGSGR*
Ga0066903_1010153842	3300005764	Tropical Forest Soil	MNPNFNWAIVAERMQALQTEADTAARARHAARIRRGTARARLARSYRRVLAFAPAGSGR*
Ga0066903_1010617963	3300005764	Tropical Forest Soil	MLEEDTMNPNLNYALVAERMQTIQADAATAARARHAARIRRATASLRQARRSRRWLSFAPAGSGR*
Ga0066903_1014513052	3300005764	Tropical Forest Soil	MNPNFNWAIVAERMQTLQAEADTAARARHTARIRRGAAHARQARRSRRWLAFAPAGLGR*
Ga0066903_1044345972	3300005764	Tropical Forest Soil	MNPNFNWAIVAERMQTMQAEADTAARARQAARIRRGTARTRLARRYRSVLAFAPAGSGR*
Ga0066903_1058818432	3300005764	Tropical Forest Soil	MNPNFNWAIVAERMQALQAEAGTVTRARHAARVRRAAAHTRQARRSRRWLSFALAGSGR*
Ga0066903_1061917942	3300005764	Tropical Forest Soil	MNPNFNYAIVAERMRTLQAGAAAATRARHAARIRRGTARTRLARRYGRVLAFAPAGSGR*
Ga0066903_1084746292	3300005764	Tropical Forest Soil	MIEEDTMNPNFNWAIVAERMQTLQAEADTAARARHAIRIRRAAAYVRQPRRSRRGLALVSVGSRR*
Ga0066903_1084746352	3300005764	Tropical Forest Soil	MIEEDTMNPNFNWAIVAERMQTLQAEADTAARARHATRIRRAAAHVRQPRRSRRGLELVSVGSRR*
Ga0079222_103540902	3300006755	Agricultural Soil	MLEEDTVNPNFNYAIVTERMQTLQAEADQAARARHTARIRRGTARARLARRYRRV
Ga0079222_113404262	3300006755	Agricultural Soil	ATLEEDTMNPNFNYAIVAERMQSLQDEAATVTRARHAARIRAAARTRQPRRSRRWLAFAPAGSGR*
Ga0079221_100590942	3300006804	Agricultural Soil	MLEEDTVNPNFNYAIVTERMQTLQAEADQAARARHTARIRRGTARARLARRYRGVLAFAPAGSGR*
Ga0079221_105167951	3300006804	Agricultural Soil	MIEEDTMNPNYNYAIVAERMQTLQAEAEASRARHAARIQRGTARARLARRPRRWLAFAPAGSGR*
Ga0075433_106992323	3300006852	Populus Rhizosphere	AMLEEDTVNPNFNYAIVTERMQTLQAEADQAARARHTARIRRGTARARLARRYRRVLAFAPAGSGR*
Ga0075423_100942103	3300009162	Populus Rhizosphere	MLEEDTVNPNFNYAIVTERMQTLQAEADQAARARHTARIRRGTARARLARRYRRVLAFAPAGSGR*
Ga0126384_101710972	3300010046	Tropical Forest Soil	MNPNLNWAIVAERMHTLQAEADTAARARHAARIRRGTIRARRVRLSRQGLSFAAASSGR*
Ga0126382_107415662	3300010047	Tropical Forest Soil	VTDDPGRSRATIEEDTMNPNFNWAIVAERMQSLQDEAATAARARHANRIRRAADRAPQARRSRRLLAFAPAGSGR*
Ga0126373_119702942	3300010048	Tropical Forest Soil	MIEEDTMNPNFNWAIVAERMQTLQAEADTAARARHAIRIRRAAAHPRQPRRSRRVLALVPAGSRR*
Ga0126373_122977982	3300010048	Tropical Forest Soil	MLEEDTMNPNLNLALVAERMQTLQAEADKAARARHAARIRRGTARARLAQRYRGVLAFAPAGSGR*
Ga0126370_105751302	3300010358	Tropical Forest Soil	MNPNLNWAIVAERMHTLQAEADTAARARHAARSRRGTIRARRVRLSRQGLSFAAASSGR*
Ga0126370_117498152	3300010358	Tropical Forest Soil	MLEEDAMNPNFNYAIVAERMQSLQDEAATVTRARHAARIRRAAARTRQPGRSRRWLAFAPAGSGR*
Ga0126376_107152542	3300010359	Tropical Forest Soil	VTDDPGPFRAMLEEDTMNPNFSWAIVAERMQSRQDEAAAAARARHAARIRRGTAGGRPARRSRRWLSFAPAGSGR*
Ga0126376_131998941	3300010359	Tropical Forest Soil	MLAEDTMNPNFNWAIVAERMHALQAEADTAARARHAARVRRGTVRARLARRSRRGLAFAPAGPRR*
Ga0126372_129893281	3300010360	Tropical Forest Soil	MLAEDTMNPNFNWAIVAERMHALQAEADTAARARHAARVRRGTLRARLARRSRRGLAFAPPAPRR*
Ga0126372_133156342	3300010360	Tropical Forest Soil	MLEEDTMNPNFNYAIVAERMQTLQAEADAVTRARHAARIRRGTARARLARRHGRVLAFAPAGSGR*
Ga0126378_127362551	3300010361	Tropical Forest Soil	MIEEDTMNPNFNWAIVAERMQTLQAEADTAARARHATRIRRAAAYVRQPRRSRRGLALVSVGSRR*
Ga0126379_107211691	3300010366	Tropical Forest Soil	MPKEDTMNPNFNWAIVAERMQALQTEADTAARARHAARIRRGTARARLARSYRRVLAFAPAGSGR*
Ga0126381_1004703542	3300010376	Tropical Forest Soil	MIEEDTMNPNFNWAIVAERMQTLQAEADTAARARHATRIRRAAAHVRQPRRSRRGLALVSVGSRR*
Ga0126381_1007381123	3300010376	Tropical Forest Soil	MLEEDTMNPNLNWALVAERMQALQAEADTAARARRAARIRRGTARARLARRYRTVLAFAPAGSGR*
Ga0126383_124446881	3300010398	Tropical Forest Soil	VTDDPGPFRAMLEEDTMNPNFSWAIVAERMQSRQDEAAAAARARHAARIRRGTAGGRQARRSRRWLSFAPAGSGR*
Ga0126383_127294762	3300010398	Tropical Forest Soil	MIEEDTMNSNFNYAIVTERMQALQAEADTAARARHAARIRRGTARARLARRYHRVLAFAPAGSGR*
Ga0132258_116176773	3300015371	Arabidopsis Rhizosphere	MLEEDAMNPNFNYAIVAERMQTLQAEADKAVRARHAARIRRGTARARLARRYRSVLAFAPAGSGR*
Ga0182032_113225092	3300016357	Soil	WAIVAERMQALQVEAETVTRTRHAARIRRVTAHTRQLRRSRRVLALVPAGSRR
Ga0182034_112257911	3300016371	Soil	NWAIVAERMHTLQAEADTARVRHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0182037_106931193	3300016404	Soil	MIEEDAMNPNLNSAIVAERMHTLQAEADTARVRHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0126371_113765292	3300021560	Tropical Forest Soil	MNTNLNFALVAERMQTLQAEAATAARARQAARIRRGTARARLARRYRSVLAFAPAGSGR
Ga0126371_113999893	3300021560	Tropical Forest Soil	AMIEEDTMNPNFNWAIVAERMQTLQAEADTAARARHATRIRRAAAHVRQPRRSRRGLELVSVGSRR
Ga0207646_109457251	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNPNFNWAIVAERMQALQAEADTATRARHAARIRCSTASARQARRPRRWLAFAPAGSGR
Ga0207700_100124133	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNPNFNWAIIAERMQTLQTEADTAARARHAAGVRRGTARARLGRRSRRGLAFAPAGSGR
Ga0209178_12731191	3300027725	Agricultural Soil	MLEEDTVNPNFNYAIVTERMQTLQAEADQAARARHTARIRRGTARARLARRYRGVLAFAPAGSGR
Ga0209073_101495193	3300027765	Agricultural Soil	MNPNYNYAIVAERMQTLQAEAEASRARHAARIQRGTARARLARRPRRWLAFAPAGSGR
Ga0209465_102563452	3300027874	Tropical Forest Soil	MNPNFNWAIVAERMQALQTEADTAARARHAARIRRGTARARLARSYRRVLAFAPAGSGR
Ga0318516_105052632	3300031543	Soil	MNPNFNYAIVAARMQALQAEADAATRARHAARIRRGTARARLARRHSRVLAFAPVGSGR
Ga0318516_105204912	3300031543	Soil	MLEEDTMNPHLNEAIVAEQRQSLQAEAVTAARVRHAARIRRGTARTGQARRSRRWLSFAAAGLGR
Ga0318534_100447593	3300031544	Soil	MIEEDAMNPNLNWAIVAERMHTLQAEADTARVRHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0318534_102654642	3300031544	Soil	MIEEDTMNPNLNWAIVAERMHTLQAEADTARVGHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0318534_106883542	3300031544	Soil	MILEDTMNPNFNWAIVAERMQALQVEAETVTRTRHAARIRRVTAHTRQLRRSRRVLALVPAGSRR
Ga0318534_107751482	3300031544	Soil	MNPNVNWAIVAEQMQSRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAQAGSGR
Ga0318538_101664403	3300031546	Soil	EKDDPGPSRAMIEEDTMNPNLNWAIVAERMHTLQAEADTARVRHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0318528_100569333	3300031561	Soil	MLEEDTMNPNFNYAIVAARMQALQAEADAATRARHAARIRRGTARARLARRHSRVLAFAPVGSGR
Ga0310915_103408162	3300031573	Soil	MNPNLNWAIVAERMHTLQAEADTARVRHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0318542_104264512	3300031668	Soil	MIEEDTMNPNLNWAIVAERMHTLQAEADTARVRHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0318542_105382521	3300031668	Soil	MNPNLNYAIVAGRMQALQAEADAATRARYAARIRRGTARARLARRHSRVLAFAPAGSGR
Ga0318574_101651391	3300031680	Soil	FVVGMRRRSRAVLEEDTMNPNFNYAIVAARMQALQAEADAATRARHAARIRRGTARARLARRHSRVLAFAPVGSGR
Ga0318574_108482732	3300031680	Soil	IPGRSRAMIEEDAMNPNLNWAIVAERMHTLQAEADTARIRHAARIRRGTARAQLARRSARWPAFAPAGSGR
Ga0318572_104221521	3300031681	Soil	MNPNFNYAIVAERMQAVQAEADTAARARHAARIRRGTARARLARRYHRVLAFAPAGLGR
Ga0318572_105881152	3300031681	Soil	MIEEDTMNPNLNWAIIAEQMQSRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAPARSGR
Ga0318560_101925102	3300031682	Soil	MNPNFNYAIVAAQMQALQAEADAATRARHAARIRRGTARARLARRHSRVLAFAPVGSGR
Ga0310686_1014713423	3300031708	Soil	MNPNFNWAIVAERMQTLQSEADTAARARHAARIRRGTARALMARRSRRGLALAPAGSGR
Ga0318493_107760301	3300031723	Soil	TIPGRSRAMLEEDTMNPHLNEAIVAERRQSLQAEAATAARVRHAARIRRGTARTGQARRSRRWLSFAAAGLGR
Ga0306918_114250971	3300031744	Soil	MNPNLNWAIIAEQMQSRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAQAGSGR
Ga0318502_102968443	3300031747	Soil	MIEEDTMNPNVNWAIVAEQMQSRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAQAGSGR
Ga0318494_103664672	3300031751	Soil	MNPNLNYAIVAERMRALQAEADAATRARHVARIRRGTARARLARRHTRVLAFAPAGSGR
Ga0318535_105673691	3300031764	Soil	VNWAIVAEQMQYRQAEAVAARRGRPAAGSRRGTARGPLARRSRRFLAFAQAGSGR
Ga0318521_107251442	3300031770	Soil	MNPNFNYAIVAERMQAVQAEADTAARARLAARIRRGTARARLARRYHRVLAFAPAGLGR
Ga0318546_112653892	3300031771	Soil	MNPHLNEAIVAERRQSLQAEAATAARVRHAARIRRGTARTGQARRSRRWLSFAAAGLGR
Ga0318508_11997111	3300031780	Soil	MNPNFNYAIVAARMQTLQAEADAATRARHAARIRRGTARARLARRHSRVLAFAPVGSGR
Ga0318552_107420561	3300031782	Soil	NFNYAIVAERMQAVQAEADTAARARHAARIRRGTARARLARRYHRVLAFAPAGLGR
Ga0318548_104805552	3300031793	Soil	MNPNFNWAIVAERMQALQVEAETVTRTRHAARIRRVTAHTRQLRRSRRVLALVPAGSRR
Ga0318557_105082001	3300031795	Soil	RRTIPGRSRAMIEEDAMNPNLNWAIVAERMHTLQAEADTARVRHAARIRRGTAHARLARRSRRWLAFAPAGSGR
Ga0318523_105942031	3300031798	Soil	AGFRRGGDRRSRAMIEEDTMNPNVNWAIVAEQMQYRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAPARSGR
Ga0318564_103103501	3300031831	Soil	MIEEDAMNPNLNWAIVAERMHTLQAEADTARVGHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0306925_101447921	3300031890	Soil	LEEDTMNPNFNYAIVAVRMQTLQAEADAATRARHAARIRRGTARARLARRHSRVLAFAPVGSGR
Ga0318522_104059121	3300031894	Soil	MNPNLNWAIVAERMHTLQAEADTARVRHAARIRRGTAHARLARRSRRWLAFAPAGSGR
Ga0310916_112001402	3300031942	Soil	MNPNLNWAIVAERMHTLQAEADTARVGHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0306926_123110761	3300031954	Soil	MNPNVNWAIVAEQMQYRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAPARSGR
Ga0306922_103150382	3300032001	Soil	MILEDTMNPNFNWAIVAERMQALQVEAETVTRARHAARIRRVTAHTRQLRRSRRVLALVPAGSRR
Ga0306922_116765482	3300032001	Soil	MLEEDTMNPNLNYAIVAGRMQALQAEADAATRARYAARIRRGTARARLARRHSRVLAFAPAGSGR
Ga0318563_104495343	3300032009	Soil	NPNFNYAIVAERMQAVQAEADTAARARHAARIRRGTARARLARRYHRVLAFAPAGLGR
Ga0318563_107040701	3300032009	Soil	MLEEDTMNPHLNEAIVAERRQSLQAEAATAARVRHAARIRRGTARTGQARRSRRWLSFAAAGLGR
Ga0318569_103371651	3300032010	Soil	NPNVNWAIVAEQMQSRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAPAGSGR
Ga0318559_103167562	3300032039	Soil	MILEETMNPNFNWAIVAERMQALQVEAETVTRARHAARIRRVTAHTRQLRRSRRVLALVPAGSRR
Ga0318549_100165903	3300032041	Soil	MNPNLNWAIVAERMHTLQAEADTARIRHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0318575_101641531	3300032055	Soil	MIEEDAMNPNLNWAIVAERMHTLQAEADTARVRHAARIRRGTAHARLARRSRRWLAFAPAGSGR
Ga0318510_104491672	3300032064	Soil	MRRRSRAVLEEDTMNPNFNYAIVAARMQALQAEADAATRARHAARIRRGTARARLARRHSRVLAFAPVGSGR
Ga0318513_100372014	3300032065	Soil	RRRSRAVLEEDTMNPNFNYAIVAARMQALQAEADAATRARHAARIRRGTARARLARRHSRVLAFAPVGSGR
Ga0318524_103537752	3300032067	Soil	MNPNVNWAIVAEQMQSRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAPARSGR
Ga0318524_107121702	3300032067	Soil	IQEDTMNPNFNWAIVAERMQALQVEAETVTRARHAARIRRVTAHTRQLRRSRRVLALVPAGSRR
Ga0306924_123897112	3300032076	Soil	NLNWAIVAERMHTLQAEADTARVRHAARIRRGTARAQLARRSRRWRAFAPAGSGR
Ga0318525_102083023	3300032089	Soil	IEEDTMNPNVNWAIVAEQMQYRQAEAVAARRGRPAAGSRRGTARGPLARRSRRFLAFAPAGSGR
Ga0318525_102916892	3300032089	Soil	MNPHLNEAIVAEQRQSLQAEAVTAARVRHAARIRRGTARTGQARRSRRWLSFAAAGLGR
Ga0306920_1007025633	3300032261	Soil	MIEEDTMNPNVNWAIVAEQMQSRQAEAVAARRARPAAGSRRGTARGPLARRSRRFLAFAPARSGR
Ga0306920_1011122802	3300032261	Soil	MNPNLNYAIVAERMQALQAEADAATRARHAARIRRGTARTRLAQRHSRVPAFAPAGSGR
Ga0310914_105848461	3300033289	Soil	MNPNFNYAIVAARMQALQAEADAATRARHVARIRRGTARARLARRHTRVLAFAPAGSGR
Ga0318519_102968012	3300033290	Soil	MNPNVNWAIVAEQMQYRQAEAVAARRGRPAAGSRRGTARGPLARRSRRFLAFAPAGSGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100920

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences