Metagenome / Metatranscriptome Family F100856

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100856
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	99 residues
Representative Sequence	MEGYDVVTVDDHKIGKVVGESGQFLIVEQGALLKSKHPLPREFAHVDESEQQVRVTVPKEIVSDSPKIDDDFDERAAAEYYGLTPSSGP
Number of Associated Samples	94
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.06 %
% of genes near scaffold ends (potentially truncated)	77.45 %
% of genes from short scaffolds (< 2000 bps)	85.29 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (31.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.980 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.82% β-sheet: 25.64% Coil/Unstructured: 61.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF04542	Sigma70_r2	38.24
PF08281	Sigma70_r4_2	15.69
PF00403	HMA	7.84
PF13490	zf-HC2	6.86
PF12804	NTP_transf_3	4.90
PF01464	SLT	1.96
PF13180	PDZ_2	0.98
PF01011	PQQ	0.98
PF00160	Pro_isomerase	0.98
PF00941	FAD_binding_5	0.98
PF00528	BPD_transp_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	38.24
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	38.24
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	38.24
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	38.24
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	7.84
COG2608	Copper chaperone CopZ	Inorganic ion transport and metabolism [P]	7.84
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.08 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.08 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	85.29 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	81.37 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.37 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.94 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000041\|ARcpr5oldR_c029044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300000652\|ARCol0yngRDRAFT_1010802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300000953\|JGI11615J12901_10212671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1278	Open in IMG/M
3300000956\|JGI10216J12902_100564106	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300004114\|Ga0062593_100484605	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300004480\|Ga0062592_101991093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300005093\|Ga0062594_100841433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300005093\|Ga0062594_101248354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300005162\|Ga0066814_10035824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300005332\|Ga0066388_100082226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3599	Open in IMG/M
3300005338\|Ga0068868_101295753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300005341\|Ga0070691_10500823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300005347\|Ga0070668_101582096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300005441\|Ga0070700_101496155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300005455\|Ga0070663_102009374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300005466\|Ga0070685_10027717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3134	Open in IMG/M
3300005526\|Ga0073909_10424376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300005543\|Ga0070672_101182215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300005545\|Ga0070695_101733893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300005564\|Ga0070664_100485007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1138	Open in IMG/M
3300005616\|Ga0068852_101973161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300005618\|Ga0068864_102094299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300005713\|Ga0066905_100002764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6683	Open in IMG/M
3300005713\|Ga0066905_100043297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2689	Open in IMG/M
3300005713\|Ga0066905_100536497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300005713\|Ga0066905_101759871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300005764\|Ga0066903_100241181	All Organisms → cellular organisms → Bacteria	2773	Open in IMG/M
3300005840\|Ga0068870_10716487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300005844\|Ga0068862_101343308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300005937\|Ga0081455_10321142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1103	Open in IMG/M
3300005983\|Ga0081540_1001335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21496	Open in IMG/M
3300006791\|Ga0066653_10449361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300009098\|Ga0105245_12371857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300010038\|Ga0126315_10624980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300010042\|Ga0126314_10784771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300010046\|Ga0126384_10419840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1134	Open in IMG/M
3300010047\|Ga0126382_11834851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300010360\|Ga0126372_11250620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300010362\|Ga0126377_10144921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2225	Open in IMG/M
3300010366\|Ga0126379_10548317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1235	Open in IMG/M
3300010399\|Ga0134127_10847819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	966	Open in IMG/M
3300012207\|Ga0137381_11005074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300012356\|Ga0137371_10075344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2616	Open in IMG/M
3300012914\|Ga0157297_10186205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300012948\|Ga0126375_12010092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300012971\|Ga0126369_11036593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300012984\|Ga0164309_11927534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300012986\|Ga0164304_10951776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300013102\|Ga0157371_10966898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300013296\|Ga0157374_10946297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	880	Open in IMG/M
3300013308\|Ga0157375_12514696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300014325\|Ga0163163_12296608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300014745\|Ga0157377_11002973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300014969\|Ga0157376_11737211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300015077\|Ga0173483_10030589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1959	Open in IMG/M
3300015372\|Ga0132256_101494458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300015373\|Ga0132257_101879840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300015373\|Ga0132257_103176638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300018072\|Ga0184635_10055891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1528	Open in IMG/M
3300018073\|Ga0184624_10437659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300018081\|Ga0184625_10006951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5100	Open in IMG/M
3300018082\|Ga0184639_10041608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2361	Open in IMG/M
3300019356\|Ga0173481_10684616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300019362\|Ga0173479_10090240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1111	Open in IMG/M
3300020005\|Ga0193697_1107803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300022756\|Ga0222622_10108600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1721	Open in IMG/M
3300022756\|Ga0222622_11376638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300022883\|Ga0247786_1028187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1085	Open in IMG/M
3300022898\|Ga0247745_1005873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1588	Open in IMG/M
3300025914\|Ga0207671_10679347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300025919\|Ga0207657_11251037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300025944\|Ga0207661_10175410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1868	Open in IMG/M
3300026035\|Ga0207703_11736039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300026075\|Ga0207708_10143557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1874	Open in IMG/M
3300026095\|Ga0207676_11755428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300026121\|Ga0207683_11118163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300026853\|Ga0207443_1010601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300027821\|Ga0209811_10268099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300028710\|Ga0307322_10019103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1569	Open in IMG/M
3300028713\|Ga0307303_10157853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300028714\|Ga0307309_10121413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300028716\|Ga0307311_10007496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2532	Open in IMG/M
3300028721\|Ga0307315_10066979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300028754\|Ga0307297_10159180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300028755\|Ga0307316_10102143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1001	Open in IMG/M
3300028768\|Ga0307280_10118106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300028782\|Ga0307306_10017374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1604	Open in IMG/M
3300028787\|Ga0307323_10330380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300028799\|Ga0307284_10036321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1674	Open in IMG/M
3300028799\|Ga0307284_10111718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300028828\|Ga0307312_10533589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300028876\|Ga0307286_10010630	All Organisms → cellular organisms → Bacteria	2844	Open in IMG/M
3300028876\|Ga0307286_10380793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300028884\|Ga0307308_10088061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1474	Open in IMG/M
3300028889\|Ga0247827_10360921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300031091\|Ga0308201_10407312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300031170\|Ga0307498_10001180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3830	Open in IMG/M
3300031226\|Ga0307497_10001623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5629	Open in IMG/M
3300031716\|Ga0310813_10571098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	997	Open in IMG/M
3300032013\|Ga0310906_10717100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300033412\|Ga0310810_10172015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2488	Open in IMG/M
3300033475\|Ga0310811_10446139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1387	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.55%
Host-Associated	Host-Associated	27.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	27.45%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.75%
Sediment	Environmental → Aquatic → Sediment	5.88%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.90%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.94%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	28.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000652	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA	Host-Associated	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026853	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5w-12 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARcpr5oldR_0290441	3300000041	Arabidopsis Rhizosphere	MEGYEVVTVDEDKIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSAQLVRVTVPKEMVSDSPKVEDRIDEREVAEHYGLSNSPGPAS
ARCol0yngRDRAFT_10108021	3300000652	Arabidopsis Rhizosphere	MEGYEVVTVDEDKIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSAQLVRVTVPKEMVSDSPKVEDRIDEREVAEHYGLSNSPGPASDVPEEGPRPAEEERARIREG
JGI11615J12901_102126713	3300000953	Soil	MEGYDVVTVDDNKLGKVVGETGPFLIVEQGALLKSKHPLPREFARVDDSEQQVRVTVPKEIFADSPEVDDDFDERAAAEYYGLTPSSGPGTEGYGVSDAAVGDPSRSSEEQAARQD
JGI10216J12902_1005641063	3300000956	Soil	MEGYEVVTSDDDKIGKVVGAKGDYLIVEHGAIFKSKHAVPRELAHVDEAEDVVRLTVSKEIVNDSPKVGDDFD
Ga0062593_1004846052	3300004114	Soil	MEGYDVVTIDEHTIGKVVGESGEFLIVEQGMLRKSKHPLPREFAYIDDAEQQVRVTVPKEILADSPKIDGDFDEREAAEHYGLMTAPEPDEVG*
Ga0062592_1019910931	3300004480	Soil	MEGYDVVTIDEHTIGKVVGESGEFLIVEQGMLRKSKHPLPREFAYIDDAEQQVRVTVPKEILADSPKIDGDFDEREAA
Ga0062594_1008414332	3300005093	Soil	MQGYDVVTVDDHKIGKVVGESGQFLIVEQGALLKSKHPLPREFAHVDESEQQVRVTVPKEIVSDSPKIDDDFDERAAAEYYGLTPSSGPGTEG
Ga0062594_1012483541	3300005093	Soil	MEGYDVATVDDHKIGKVVGESGMFLIVEQGALLKSKHPLPREFAHVDDSEEQVRVTVPKEIFADSPKVDDDFDEQAAAEYYGLAPSP
Ga0066814_100358241	3300005162	Soil	MEGYDVVTIDEHKVGKVVGESGNFLIVEQGTLRKSKHPLPREFAHVDDAEQQVRVTVPKEIVSDSPTVEDEIDERAVNEHYGLASAPG
Ga0066388_1000822265	3300005332	Tropical Forest Soil	MEGYDVVTVDEHKIGKVVGESGEFVIIEQGTLRKSQHPLPREFAYIDEAEQQVRVTVPKELVTNSPKVEEGFDEREVAEHYGLVTPPEPDEAG*
Ga0068868_1012957531	3300005338	Miscanthus Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSS
Ga0070691_105008231	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MEGYDVVTVDDHKIGKVVGESGMFLIVEQGALLKSKHPLPREFAHVDDSEEQVRVTVPKEIFADSPKVDDDFDEQAAAEYYGLAPSPGPGTEGYGVSDAGDPSRSSEEQAAR
Ga0070668_1015820962	3300005347	Switchgrass Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSSEE
Ga0070700_1014961552	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKVDD
Ga0070663_1020093741	3300005455	Corn Rhizosphere	MEGYDVVTVDDHKVGKVVGESGNFLIIEQGALLKSKHALPRELAHVDESEQKVRVTVPKEIVDDSPKVDDDGFDERAAAEHYGIAPSDGPGTEGYGVTDAEAGDPSRSSAEQAARQGLESAEEQ
Ga0070685_100277171	3300005466	Switchgrass Rhizosphere	MEGYDVVTVDDDKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKVDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSSEEQAARQG
Ga0073909_104243761	3300005526	Surface Soil	MEGYDVVTVDDHKIGKVVGETGAFLIVEQGALMKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFDEQVAAEYYGIALSPGPGT
Ga0070672_1011822151	3300005543	Miscanthus Rhizosphere	MEGYDVVTVDDNKIGKVVGESGMFLIVEQGALLKSKHPIPREFAHVDDSEQQVRVTVAKEILADSPKVDDEFDEQAAAEYY
Ga0070695_1017338931	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIVADSPKIDDDFDEQVAAEYYGIAPSPGPGTEGYGVSDAGDPSRSSE
Ga0070664_1004850073	3300005564	Corn Rhizosphere	MDGYDVVSVDDQKIGKVVGETGMFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFNEQVAAEYYGIALSPGPGTEGYGVSEAGDPSRSSEEQA
Ga0068852_1019731612	3300005616	Corn Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSSEEQ
Ga0068864_1020942991	3300005618	Switchgrass Rhizosphere	MEGYDVVTVDDDKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDSAVSDPSRSSEEQAARQDVEP
Ga0066905_1000027644	3300005713	Tropical Forest Soil	MEGYEVVTVDEDKIGKVVGESGEFLIIEQGMLRKSKHPLPREFAHVDDSEQQVRVTVPKKIVVDSPTVDEGLDEQAVKEHYGLQEER*
Ga0066905_1000432973	3300005713	Tropical Forest Soil	MDQATKRRRPMDGYDVVTVDEHKIGKVVGQSGEFLIVERGMLRKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPTLDAGLDERAVKEHYGLTFAPSSPALPGDRTTGTDARGQVER*
Ga0066905_1005364972	3300005713	Tropical Forest Soil	MEGYDVVTVDEHKIGKVVGESGEFVIIEQGTIRKSQHPLPREFAYIDEAEQQVRVTVPKELVTNSPKVEEGFDEREVAEHYGLVTSPEPDEVG*
Ga0066905_1017598712	3300005713	Tropical Forest Soil	MEGYEVVTIDEHKIGKVVGESGEFLIVEQGTLRKSQHPLPREFAYVDDAEQQVRVTVPKDLVTGSPKVEGEFDARAVEEHYGLTEPPEPDEIG*
Ga0066903_1002411813	3300005764	Tropical Forest Soil	MEGYDVVTVDEHKIGKVVGESGEFLIVEQGMLRKTQHPLPREFAHVDDAEQQVRVTVPKEIVADSPTVDGDFDERAVREHFGLTQENR*
Ga0068870_107164871	3300005840	Miscanthus Rhizosphere	MEGYDVVTVDDDKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKVDDDFDEQAAAEYYGLTPSS
Ga0068862_1013433082	3300005844	Switchgrass Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTEGYG
Ga0081455_103211421	3300005937	Tabebuia Heterophylla Rhizosphere	MEGYEVVTVDEHKIGKVVGESGNFLIVEQGTLLKSKHALPRELAHVDESEEKVRVTVPKEIVDDSPKIDDEGFDERAAAEHYGLAPSN
Ga0081540_100133518	3300005983	Tabebuia Heterophylla Rhizosphere	MEGYDVVTVDEHKIGKVVGESGEFLIVEQGTLRKSKHPLPREFAYVDDAEQQVRVTVPKDLLADSPKVDEDFDERKAAEHYGLITAPEPDEVG*
Ga0066653_104493612	3300006791	Soil	MEGYDVVTVDDHKIGKIVGESGDFLIVEQGTLRKTQHPLPREFAHVDDAEQQVRVTVAKEIVSDSPTLDGDLDEQAVKEHYGLT
Ga0105245_123718571	3300009098	Miscanthus Rhizosphere	MEGYDVVTVDDHKIGKVVGESGQFLIVEQGALLKSKHPLPREFAHVDESEQQVRVTVPKEIVSDSPKIDDDFDERAAAEYYGLTPSSGP
Ga0126315_106249801	3300010038	Serpentine Soil	MEGYDVVTVDDHKIGKVVGQSGAFLIIEQGALLKSKHALPREFAHVDDSDRQVRVTVPKEIVADSPKIDDHFDEQVAAEYYGIAPSPGPGTEGYGVSEAGD
Ga0126314_107847711	3300010042	Serpentine Soil	MEGYDVVTVDDHKIGKVVGETGAFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFDEQVAAE
Ga0126384_104198401	3300010046	Tropical Forest Soil	MEGYEVVTIDEHKIGKVVGESGEFLIVEQGTLRKSQHPLPREFAYVDDAEQQVRVTVPKDLVTGSPKVEGDVDARAVEEHYGLTEPPEPDEIG*
Ga0126382_118348512	3300010047	Tropical Forest Soil	MEGYEVVTVDEDKIGKVVGESGEFLIIEQGMLRKSKHPLPREFAHVDDSEQQVRVTVQKKIVVDSPTVDEGLDEQAVKEHYGLQEER*
Ga0126372_112506201	3300010360	Tropical Forest Soil	LGAGIRVTTERRRHMEGYEVVTIDEHKIGKVVGESGEFLIVEQGTLRKSQHPLPREFAYVDDAEQQVRVTVPKDLVVGSPKVEGSFDERAVEEHYGLAEPPEREPEPDEIG*
Ga0126377_101449214	3300010362	Tropical Forest Soil	MDGYDVVTVDEHKIGKVVGQSGEFLIVERGMLRKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPTLDAGLDERAVKEHYGLTFAPSSPALPGDRTTGTDARGQVER*
Ga0126379_105483173	3300010366	Tropical Forest Soil	MEGYDVVTVDEHKVGKVVGESGAFLIVEQGALLKSKHALPREFAHVDDAEQQVRVTVPKEIVSDSPKVDDDDIDERAVKEHYGLTVEP
Ga0134127_108478191	3300010399	Terrestrial Soil	MEGYDVVTVDDHKIGKVVGESGMFLIVEQGALLKSKHPLPREFAHVDDSEEQVRVTVPKEIFADSPKVDDDFDEQAAAEYYGLAPSPGPGTEGYGVS
Ga0137381_110050741	3300012207	Vadose Zone Soil	MEGYDVVTIDDHKVGKVVGQSGAFLIVEHGTIRKSRHPLPREFAHVDESEQQVRMTVSKEVFSDSPQIDRGLDEQEVAEYYGLATEGSAAPGTEGYGETAPGDPTRSAEEDELSA
Ga0137371_100753441	3300012356	Vadose Zone Soil	MEGYVVVTVDDHKVGKVVGESGGYLIVEQGTLKKSKHALPREFAHVDEAEQQVRMTVSKDVFCDSPKVNGAPDERAIAEHYGLRETVPENLPQSADEQELRTGI
Ga0157297_101862051	3300012914	Soil	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAA
Ga0126375_120100921	3300012948	Tropical Forest Soil	MDGYDVVTVDEHKIGKVVGQSGEFLIVERGMLRKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPTLDAGLDERAVKEHYGLTFAPSSPALPGDRTTGNSERGRAER*
Ga0126369_110365932	3300012971	Tropical Forest Soil	MEGYDVVTVDEHKIGKVVGESGEFLIVEQGTLRKSKHPLPREFAYIDEAEQQVRVTVPKHLVADSPTVEEGFDEREVAEHYGLVDSPEPDEVD*
Ga0164309_119275341	3300012984	Soil	MEGYEVVTVDEHKVGKVVGESGNFLIIEQGALLKSKHALPRELAHVDDSEQKVRVTVPKELVDDSPKIDDDGFDEQASAEHYGLAPSNGPGTEGYGVTDAEAGDPSRSSAEQAARQGMES
Ga0164304_109517762	3300012986	Soil	MEGYDVVTVDDQKIGKVVGETGAFLIVEQGALMKSKHPLPREFAHVDDSEQQVRVTVPKEIVSDSPKIDDDFDEQVAAEYYGIAPSPGPGTEGYGVSDAGDPSR
Ga0157371_109668981	3300013102	Corn Rhizosphere	MEGYDVVTVDDNKLGKVVGETGAFLIVEQGALMKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDDFDQQVAAEYY
Ga0157374_109462971	3300013296	Miscanthus Rhizosphere	MEGYDVVTVDDDKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKVDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSSEEQAARQGVDP
Ga0157375_125146962	3300013308	Miscanthus Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKVDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSSEEQAAREGRAT
Ga0163163_122966082	3300014325	Switchgrass Rhizosphere	MEGYEVLTVDDHKVGKVVGESGNFLIIEQGTLLKSRHALPRELARVDESEQKVRVTVPKEIVDDSPKVDDDGFDERAAAEHYGLSPSNGPGTEG
Ga0157377_110029732	3300014745	Miscanthus Rhizosphere	MEGYDVVTVDDDKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSSEEQAARQG
Ga0157376_117372112	3300014969	Miscanthus Rhizosphere	MEGYDVVTVDDQKIGKVVGETGAFLIVEQGALMKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFDEQVAAEYYGIAPSPGPGTEGYGVSDAGDPSRSSEEQAARQGLDPAVEERA
Ga0173483_100305891	3300015077	Soil	MEGYDVVTVDDNKLGKVVGETGPFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIFADSPKVDDDFDERAAAEYYGLTPSSGPGTEGYGVSDSA
Ga0132256_1014944581	3300015372	Arabidopsis Rhizosphere	MEGYEVVTVDEHKVGKVVGESGNFLIIEQGALLKSKHALPRELAHVDDSEQKVRVTVPKEIVDDSPKIDDDGFDERVAAEHYGLAPSNGPGTEGYGVTDAEAGDPSRSSAEQA
Ga0132257_1018798401	3300015373	Arabidopsis Rhizosphere	MEGYDVVTVDDNKIGKVVGETGAFLIVEQGALMKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDDFDEQVAAEYYGIAPSPGPGTEGYGVSDAGDPSRSSEEQAA
Ga0132257_1031766382	3300015373	Arabidopsis Rhizosphere	MEGYDVITVDEHKVGKVVGESGNYLIVEQGTLRKSKHPLPREFAHVDDAEQQVRVTVPKEIVSDSPTVDDEIDERAVNEHYGLSYAPGPGADGSGASPGDAEEERAKILDG
Ga0184635_100558913	3300018072	Groundwater Sediment	LEGYEVVTVDEHKIGKVIGESGDFLIVEQGALLKSKHALPREFAHVDDSAQLVRVTVPKEIVSESPKVDNRIDEREVAEHYGLATSPDSPASEGQREMPRPTEKR
Ga0184624_104376591	3300018073	Groundwater Sediment	MEGYEVVTVDEHKIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSAQLVRVTVPKEIVSESPKVDNRIDEREVAEHYGL
Ga0184625_100069517	3300018081	Groundwater Sediment	LEGYEVVTVDEHKIGKVIGESGDFLIVEQGALLKSKHALPREFAHVDDSAQLVRVTVPKEIVSESPKVDNRIDEREVAEHYGLATSPGSPASEGQREMPRPTEKR
Ga0184639_100416084	3300018082	Groundwater Sediment	LEGYEVVTVDEHKIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSAQLVRVTVPKEIVSESPKVDNRIDEREVAEHYGLATSPGPAPEGHGERPRPTEKR
Ga0173481_106846162	3300019356	Soil	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKVDDDFD
Ga0173479_100902401	3300019362	Soil	MEGYDVVTVDDDKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSSEEQAARQGI
Ga0193697_11078031	3300020005	Soil	MEGYDVVTVDDHKIGKVVGESGQFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIVSDSPKIDDDFDEQAAAEYYGIAPSSGPGTEGYGTSDAGDPSRSSEEQAARQGLEPA
Ga0222622_101086001	3300022756	Groundwater Sediment	MEGYEVVTVDEHRIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSKQLVRVTVPKEMVSDSPKVDDRIDERKVAEHYGLFTSSGPT
Ga0222622_113766381	3300022756	Groundwater Sediment	MEGYEVVTVDEHKIGKVVGESGDFLIVEQGALLKSKHALPREFAYVDDSEQLVRVTVPKEIVSESPKVDDRIDEREVAEHYGLATSPGPAPEGHGERPRPTEKR
Ga0247786_10281871	3300022883	Soil	MEGYDVVTVDDNKLGKVVGETGPFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIFADSPKVDDDFDERAAAEYYGLTPSSGPGTEGYGVSDSAVSDPSRSSEEQAARQDV
Ga0247745_10058731	3300022898	Soil	MEGYDVVTVDDNKLGKVVGETGPFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIFADSPKVDDDFDERAAAEYYGLTPSSGPGTEGYGV
Ga0207671_106793471	3300025914	Corn Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTE
Ga0207657_112510371	3300025919	Corn Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKVDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDPAVGDPSRSSEEQAAR
Ga0207661_101754105	3300025944	Corn Rhizosphere	MDGYDVVSVDDQKIGKVVGETGMFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFNEQVAAEYYGIALSPGPGTEG
Ga0207703_117360391	3300026035	Switchgrass Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFGNR
Ga0207708_101435573	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MEGYDVVTVDDDKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKVEAVLGVQAKSE
Ga0207676_117554282	3300026095	Switchgrass Rhizosphere	MEGYDVVTVDDDKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDAEQQVRVTVPKEIFSDSPKIDDDFDEQAAAEYYGLTPSSGPGTEGYGVSDSAVSDPSRSSEEQAARQDVEPA
Ga0207683_111181631	3300026121	Miscanthus Rhizosphere	MEGYDVVTVDDNKLGKVVGETGKFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIFADSPKVDDDFDERAAAEYYGLTPSSGPGTEGYGV
Ga0207443_10106012	3300026853	Soil	MEGYDVVTVDDNKLGKVVGETGPFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIFADSPKVDDDFDERAAAEYYGLTPSSGPGTEGYGVSDSAVSDPSRSSEEQA
Ga0209811_102680992	3300027821	Surface Soil	MEGYDVVTVDDHKIGKVVGETGAFLIVEQGALMKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFDEQVAAEYYGIALSPGPGTE
Ga0307322_100191032	3300028710	Soil	MEGYEVVTVDEHRIGKVVGESGDFLIVEQGALLKSKHALPREFAYVDDSEQLVRVTVPKEIVSESPKVDDRIDEREVAEHYGLATSPGPAPEGHGERPRPTEKR
Ga0307303_101578532	3300028713	Soil	MQGYDVVTVDDHKIGKVVGESGQFLIVEQGALLKSKHPLPREFAHVDESEQQVRVTVPKEIVSDSPKIDDDFDERAAAEYYGLTPSSGPGTEGYGTSDAGDPSRSSEEQAARQGL
Ga0307309_101214132	3300028714	Soil	MEGYDVVTVDDHKIGKVVGESGQFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIVSDSPKIDDDFDEQAAAEYYGIAPSSGPGTEGYGTSDAGDPSRSSEEQAARQGLEPAEE
Ga0307311_100074966	3300028716	Soil	MEGYEVVTVDEHRIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSKQLVRVTVPKEMVSDSPKVDDRIDERKVAEHYGFFT
Ga0307315_100669791	3300028721	Soil	MEGYEVVTVDEHRIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSKQLVRVTVPKEMVSDSPKVDDRIDERKVAEHYGLSTSSGPTSEGQGEKP
Ga0307297_101591801	3300028754	Soil	MEGYEVVTVDEHRIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSKQLVRVTVPKEMVSDSPKVDDRIDERKVAEHYGLSTSS
Ga0307316_101021432	3300028755	Soil	MDGYDVVTVDDHKIGKVVGETGTFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFDEQAAAEYYGLAPSPGPGTEGYGESDAGDPSRSSEEQAARQG
Ga0307280_101181062	3300028768	Soil	MQGYDVVTVDDHKIGKVVGESGQFLIVEQGALLKSKHPLPREFAHVDESEQQVRVTVPKEIVSDSPKIDDDFDERAAAEYYGLTPSSGPGTE
Ga0307306_100173744	3300028782	Soil	MQGYDVVTVDDHKIGKVVGESGQFLIVEQGALLKSKHPLPREFAHVDESEQQVRVTVPKEIVSDSPKIDDDFDERAAA
Ga0307323_103303801	3300028787	Soil	MEGYDVVTVDDHKIGKVVGETGTFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFDEQAAA
Ga0307284_100363214	3300028799	Soil	MEGYEVVTVDEHKIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSKQLVRVTVPKEMVSDSPKVDDRIDERKVAEHYGLFTSS
Ga0307284_101117182	3300028799	Soil	MEGYDVVTVDDHKIGKVVGQSGDFLIIEKGALMKSKHALPREFAHVDDSEQQVRVTVPKEIIDDSPKLDGDFDEQAVAEHYGLTPSTAPGTEGYGETAAGDPSRSSEEQAA
Ga0307312_105335892	3300028828	Soil	MEGYDVVTVDDHKIGKVVGQSGDFLIIEKGALMKSKHALPREFAHVDDSEQQVRVTVPKEIIDDSPKLDGDFDEQAVAEHYGLTPSTAPGTEGYGETAAGDPSRSSEEQAARQGM
Ga0307286_100106306	3300028876	Soil	MDGYDVVTVDDHKIGKVVGETGTFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDFDEQAAAEYYGLA
Ga0307286_103807932	3300028876	Soil	LEGYEVVTVDEHKIGTVVGESGDFLIVEQGALLKSKHALPREFAHVDDSAQLVRVTVPKEIVSESPKVDNRIDEREVAEHYGLATSPDSPASEGQREMPRPTEKR
Ga0307308_100880611	3300028884	Soil	MEGYEVVTVDEHRIGKVVGESGDFLIVEQGALLKSKHALPREFAHVDDSKQLVRVTVPKEMVSDSPKVDDRIDERKVAEHYGLFTSS
Ga0247827_103609211	3300028889	Soil	MEGYDVVTVDDHKIGKVVGETGAFLIVERGALMKSKHPLPREFAHVDDSEQQVRVTVPKEIVAESPKIDDDFDEQVAAEYYGIAPSPGPGTEGYGVSDAGDPSRSSEEQAARQGLD
Ga0308201_104073122	3300031091	Soil	RTMEGYEVVTVDEHKIGKVVGESGDFLIVEQGALLKSKHALPREFAYVDDSEQLVRVTVPKEIVSESPKVDDRIDEREVAEHYGLATSPGPAPEGHGERPRPTEKR
Ga0307498_100011804	3300031170	Soil	LEGYEVVTVDEHKIGKVVGESGNFLIVEQGALLKSKHALPREFAHVDDSEQLVRVTVPKEIVSDSPKVDDRIDEREVAEHYGLATSPGPASEGQGEMSRPTAQEER
Ga0307497_100016237	3300031226	Soil	NGYERRNPTKEEPLEGYEVVTVDEHKIGKVVGESGNFLIVEQGALLKSKHALPREFAHVDDSEQLVRVTVPKEIVSDSPKVDDRIDEREVAEHYGLATSPGPASEGQGEMSRPTAQEER
Ga0310813_105710982	3300031716	Soil	MEGYDVVTVDDNKLGKVVGETGPFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIFADSPKVDDDFDERAAAEYYGLTPSSGPGTEGYGVSDSAVSDPSRSSEEQAARQDVEPAAQERAE
Ga0310906_107171002	3300032013	Soil	MDGYDVVTVDDHKIGKVVGETGAFLIVEQGALMKSKHPLPREFAHVDDSEQQVRVTVPKEIVADSPKIDDDDFDEQVAAEYYGIAPSPGPGTEGYGVSDAGDPSRSSEEQ
Ga0310810_101720151	3300033412	Soil	MEGYDVVTVDDNKLGKVVGETGPFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIFADSPKVDDDFDERAAAEYYGLTPSSGP
Ga0310811_104461394	3300033475	Soil	MEGYDVVTVDDNKLGKVVGETGPFLIVEQGALLKSKHPLPREFAHVDDSEQQVRVTVPKEIFADSPKVDDDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100856

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences