NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F100724

Metagenome Family F100724

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F100724
Family Type Metagenome
Number of Sequences 102
Average Sequence Length 66 residues
Representative Sequence MTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Number of Associated Samples 57
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 63.73 %
% of genes near scaffold ends (potentially truncated) 27.45 %
% of genes from short scaffolds (< 2000 bps) 85.29 %
Associated GOLD sequencing projects 37
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (59.804 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(71.569 % of family members)
Environment Ontology (ENVO) Unclassified
(86.275 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.118 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.25%    β-sheet: 0.00%    Coil/Unstructured: 50.75%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF00145DNA_methylase 7.84
PF08291Peptidase_M15_3 1.96
PF11325DUF3127 1.96
PF08800VirE_N 1.96
PF11753DUF3310 0.98

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 102 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 7.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A59.80 %
All OrganismsrootAll Organisms40.20 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10009030Not Available6581Open in IMG/M
3300000101|DelMOSum2010_c10022094All Organisms → cellular organisms → Bacteria3687Open in IMG/M
3300000101|DelMOSum2010_c10147889All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium868Open in IMG/M
3300000101|DelMOSum2010_c10253589Not Available552Open in IMG/M
3300000117|DelMOWin2010_c10011412All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium4987Open in IMG/M
3300000117|DelMOWin2010_c10024998All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3023Open in IMG/M
3300000117|DelMOWin2010_c10044187All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2024Open in IMG/M
3300001963|GOS2229_1023835All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1874Open in IMG/M
3300006025|Ga0075474_10235609Not Available553Open in IMG/M
3300006027|Ga0075462_10015104All Organisms → Viruses → Predicted Viral2490Open in IMG/M
3300006027|Ga0075462_10122162Not Available803Open in IMG/M
3300006802|Ga0070749_10075053All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2023Open in IMG/M
3300006802|Ga0070749_10148757Not Available1362Open in IMG/M
3300006802|Ga0070749_10173072All Organisms → Viruses → Predicted Viral1246Open in IMG/M
3300006802|Ga0070749_10183982All Organisms → Viruses → Predicted Viral1202Open in IMG/M
3300006802|Ga0070749_10251455Not Available1001Open in IMG/M
3300006802|Ga0070749_10392572Not Available766Open in IMG/M
3300006802|Ga0070749_10617673Not Available584Open in IMG/M
3300006810|Ga0070754_10164730All Organisms → Viruses → Predicted Viral1051Open in IMG/M
3300006810|Ga0070754_10202134Not Available925Open in IMG/M
3300006810|Ga0070754_10354378Not Available649Open in IMG/M
3300006810|Ga0070754_10397558Not Available603Open in IMG/M
3300006874|Ga0075475_10337435Not Available615Open in IMG/M
3300006916|Ga0070750_10137220All Organisms → Viruses → Predicted Viral1113Open in IMG/M
3300006916|Ga0070750_10391355Not Available581Open in IMG/M
3300006919|Ga0070746_10050864All Organisms → Viruses → Predicted Viral2163Open in IMG/M
3300007236|Ga0075463_10093840All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300007344|Ga0070745_1241104Not Available656Open in IMG/M
3300007344|Ga0070745_1316809Not Available553Open in IMG/M
3300007345|Ga0070752_1264531Not Available665Open in IMG/M
3300007345|Ga0070752_1372982Not Available532Open in IMG/M
3300007346|Ga0070753_1171756Not Available813Open in IMG/M
3300007346|Ga0070753_1347266Not Available524Open in IMG/M
3300007538|Ga0099851_1160407Not Available833Open in IMG/M
3300007538|Ga0099851_1359359Not Available507Open in IMG/M
3300007540|Ga0099847_1048355Not Available1343Open in IMG/M
3300007540|Ga0099847_1135812Not Available736Open in IMG/M
3300007540|Ga0099847_1158889All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon670Open in IMG/M
3300007540|Ga0099847_1173944Not Available634Open in IMG/M
3300007541|Ga0099848_1082143All Organisms → Viruses → Predicted Viral1255Open in IMG/M
3300007541|Ga0099848_1234620Not Available647Open in IMG/M
3300007541|Ga0099848_1296411All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes556Open in IMG/M
3300007542|Ga0099846_1128159All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon923Open in IMG/M
3300007542|Ga0099846_1229936All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300007960|Ga0099850_1139831Not Available980Open in IMG/M
3300007960|Ga0099850_1364178Not Available540Open in IMG/M
3300008012|Ga0075480_10219943Not Available995Open in IMG/M
3300009001|Ga0102963_1254484Not Available694Open in IMG/M
3300010316|Ga0136655_1034766All Organisms → Viruses → Predicted Viral1619Open in IMG/M
3300010316|Ga0136655_1098177Not Available886Open in IMG/M
3300010368|Ga0129324_10200272All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon811Open in IMG/M
3300010368|Ga0129324_10336531Not Available589Open in IMG/M
3300010368|Ga0129324_10377665All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon549Open in IMG/M
3300010368|Ga0129324_10388754All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon540Open in IMG/M
3300010392|Ga0118731_104206006Not Available576Open in IMG/M
3300013010|Ga0129327_10180644All Organisms → Viruses → Predicted Viral1059Open in IMG/M
3300017951|Ga0181577_10639282Not Available653Open in IMG/M
3300017989|Ga0180432_10905196Not Available605Open in IMG/M
3300021378|Ga0213861_10243499Not Available953Open in IMG/M
3300021389|Ga0213868_10236640All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1075Open in IMG/M
3300021958|Ga0222718_10334193Not Available776Open in IMG/M
3300021958|Ga0222718_10520484Not Available572Open in IMG/M
3300021959|Ga0222716_10025004All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium4402Open in IMG/M
3300021959|Ga0222716_10354261Not Available868Open in IMG/M
3300021960|Ga0222715_10092335All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1972Open in IMG/M
3300021960|Ga0222715_10384990All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aequorivita → unclassified Aequorivita → Aequorivita sp.771Open in IMG/M
3300021964|Ga0222719_10095872All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2175Open in IMG/M
3300022053|Ga0212030_1059514Not Available544Open in IMG/M
3300022063|Ga0212029_1037141Not Available693Open in IMG/M
3300022065|Ga0212024_1081342Not Available576Open in IMG/M
3300022158|Ga0196897_1042346Not Available541Open in IMG/M
3300022167|Ga0212020_1047849All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium726Open in IMG/M
3300022183|Ga0196891_1062204All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon670Open in IMG/M
3300022187|Ga0196899_1114155Not Available785Open in IMG/M
3300022187|Ga0196899_1172463Not Available588Open in IMG/M
3300022198|Ga0196905_1050474Not Available1185Open in IMG/M
3300022198|Ga0196905_1073362Not Available940Open in IMG/M
3300022198|Ga0196905_1189488Not Available518Open in IMG/M
3300022200|Ga0196901_1103838Not Available988Open in IMG/M
3300025543|Ga0208303_1052400Not Available986Open in IMG/M
3300025610|Ga0208149_1134844Not Available572Open in IMG/M
3300025630|Ga0208004_1030625All Organisms → Viruses → Predicted Viral1580Open in IMG/M
3300025646|Ga0208161_1021444All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.2424Open in IMG/M
3300025646|Ga0208161_1023738All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2260Open in IMG/M
3300025646|Ga0208161_1044017All Organisms → Viruses → Predicted Viral1475Open in IMG/M
3300025646|Ga0208161_1156618Not Available562Open in IMG/M
3300025655|Ga0208795_1069287Not Available998Open in IMG/M
3300025671|Ga0208898_1010443All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium4652Open in IMG/M
3300025671|Ga0208898_1075849Not Available1100Open in IMG/M
3300025671|Ga0208898_1163807Not Available583Open in IMG/M
3300025759|Ga0208899_1010316All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium5232Open in IMG/M
3300025759|Ga0208899_1059074All Organisms → Viruses → Predicted Viral1596Open in IMG/M
3300025759|Ga0208899_1083141Not Available1242Open in IMG/M
3300025769|Ga0208767_1041652All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2235Open in IMG/M
3300025769|Ga0208767_1138120Not Available908Open in IMG/M
3300025815|Ga0208785_1101529All Organisms → cellular organisms → Bacteria → Proteobacteria709Open in IMG/M
3300025828|Ga0208547_1197862Not Available543Open in IMG/M
3300025853|Ga0208645_1261459Not Available569Open in IMG/M
3300025889|Ga0208644_1300742Not Available637Open in IMG/M
3300027917|Ga0209536_100604833Not Available1365Open in IMG/M
3300034374|Ga0348335_133776Not Available709Open in IMG/M
3300034375|Ga0348336_052073All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1676Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous71.57%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.86%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water6.86%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine6.86%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.96%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.98%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.98%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.98%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh0.98%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.98%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment0.98%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017989Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_2 metaGEnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025815Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025828Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1000903053300000101MarineMTRPELYQWLAWRKELGLPHVPQKVVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
DelMOSum2010_1002209463300000101MarineMTRPELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
DelMOSum2010_1014788943300000101MarineRLQGEAIGRPNHTRTHPMTRPQLHNWLAWRRELGLPPVPQNIVNDLLNDRQTFTIDQPRTIQAFRKVTYLWGLITLYKRVQLPNQ*
DelMOSum2010_1025358913300000101MarineMTRPQLHNWLAWRKELGLPPVPQNIVNDLLNDRQTFTIDQPRTIQAFRKVTYLWGLITLYKRVQLPNQ*
DelMOWin2010_10011412133300000117MarineELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
DelMOWin2010_1002499853300000117MarineMTRVQLHQWLAWRKELGLPPVPQATVNNLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
DelMOWin2010_1004418753300000117MarineMTRPELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
GOS2229_102383553300001963MarineMTRPQLHQWLAWRRELGLPPVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0075474_1023560923300006025AqueousMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKVKQ*
Ga0075462_1001510443300006027AqueousMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRNVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0075462_1012216213300006027AqueousMTRPELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLNK*
Ga0070749_1007505363300006802AqueousMTRPQLHNWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0070749_1014875753300006802AqueousMTRPQLHNWLAWRKELGLPPVSQKTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0070749_1017307213300006802AqueousWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0070749_1018398243300006802AqueousMTRPELHNWLAWRRELGLPHVPQKVVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0070749_1025145543300006802AqueousMTRPQLHNWLAWRKELGLPPVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVY
Ga0070749_1039257213300006802AqueousMTRPELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGL
Ga0070749_1061767323300006802AqueousWRRELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0070754_1016473033300006810AqueousMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKVKQ*
Ga0070754_1020213423300006810AqueousMTRPQLHNWLAWRRELGLPPVPQQTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKIDK*
Ga0070754_1035437823300006810AqueousMTRPQLHNWLAWRRELGLPPVPQNIVNDLLNDRQTFTIDQPRTIQAFRKVTYLWGLITLYKRVQLPNQ*
Ga0070754_1039755813300006810AqueousMTRPELYQWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0075475_1033743533300006874AqueousLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKVKQ*
Ga0070750_1013722053300006916AqueousRPELYQWLAWRKELGLPHVPQKVVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKIDK*
Ga0070750_1039135523300006916AqueousMTRVQLHQWLAWRKELGLPPVPQATVNNLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0070746_1005086423300006919AqueousMTRPELYQWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0075463_1009384023300007236AqueousMTRPQLHNWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0070745_124110433300007344AqueousMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKV
Ga0070745_131680933300007344AqueousMTRPELYQWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGL
Ga0070752_126453123300007345AqueousMTRPQLHNWLAWRKELGLPHVPQKVVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0070752_137298223300007345AqueousMTRPELYQWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKIDK*
Ga0070753_117175613300007346AqueousMTRPELYQWLAWRKELGLPHVPQKVVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPI
Ga0070753_134726613300007346AqueousAMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKVKQ*
Ga0099851_116040723300007538AqueousMTRVQLHQWLAWRKELGLPPVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0099851_135935923300007538AqueousMTRVQLHQWLAWRKELGLPPVPQATVNNLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK*
Ga0099847_104835533300007540AqueousMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK*
Ga0099847_113581233300007540AqueousMTRVQLHQWLAWRNELGLPPVPQKTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLSK*
Ga0099847_115888933300007540AqueousWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK*
Ga0099847_117394423300007540AqueousMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0099848_108214333300007541AqueousMTRPQLHQWLAWRRELGLPPVPQQTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK*
Ga0099848_123462023300007541AqueousMTRPQLHNWLAWRRELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLSK*
Ga0099848_129641133300007541AqueousMTRPQLHQWLAWRKELGLPPVPQKTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKVKQ*
Ga0099846_112815923300007542AqueousMTRPQLHQWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK*
Ga0099846_122993633300007542AqueousMTRVQLHQWLAWRKELGLPPVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKINK*
Ga0099850_113983113300007960AqueousMTRPQLHNWLAWRRELGLPPVPQNIVNDLLNDRQTFTIDQPRTIQAFRKVTYLWGLITLYKR
Ga0099850_136417823300007960AqueousMTRPQLHQWLAWRKELGLPPVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0075480_1021994343300008012AqueousMTRPQLHNWLAWRKELGLPPVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLSK*
Ga0102963_125448433300009001Pond WaterMTRPELHQWLAWRKELGLPHVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLSK*
Ga0136655_103476663300010316Freshwater To Marine Saline GradientMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0136655_109817713300010316Freshwater To Marine Saline GradientMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0129324_1020027213300010368Freshwater To Marine Saline GradientLANRRRKQAMTRPQLHNWLAWRRELGLPPVPQQTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLNK*
Ga0129324_1033653123300010368Freshwater To Marine Saline GradientMTRPQLHNWLAWRRELGLPPVPQATVNNLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0129324_1037766513300010368Freshwater To Marine Saline GradientNWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Ga0129324_1038875433300010368Freshwater To Marine Saline GradientMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0118731_10420600613300010392MarineMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK*
Ga0129327_1018064413300013010Freshwater To Marine Saline GradientWLAWRNELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKIDK*
Ga0181577_1063928213300017951Salt MarshGWLEWRKQVGLPPVPQAKINSMINDSNTFIVDQPRQVQAFRKVTYLWGLIKVYKPIKLDK
Ga0180432_1090519623300017989Hypersaline Lake SedimentMTRPQLHNWLAWRKELGLPPVPQATVNDLLKDNRTFITDQPRNVQAFRKVTYLWGLIKIYKPIKLNT
Ga0213861_1024349913300021378SeawaterMTRVQLHQWLAWRNELGLPPVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0213868_1023664023300021389SeawaterMTRVQLHQWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Ga0222718_1033419323300021958Estuarine WaterMTRPELYQWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLSK
Ga0222718_1052048413300021958Estuarine WaterMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Ga0222716_1002500453300021959Estuarine WaterMTRPQLHNWLAWRKELGLPPVPQNIVNDLLNDRQTFTIDQPRTIQAFRKVTYLWGLITLYKRVQLPNQ
Ga0222716_1035426123300021959Estuarine WaterMTRPELYQWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0222715_1009233573300021960Estuarine WaterMTRPQLHNWLAWRKELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGL
Ga0222715_1038499013300021960Estuarine WaterLAWRKELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKIYKPIKVKQ
Ga0222719_1009587223300021964Estuarine WaterMTRPELYQWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Ga0212030_105951423300022053AqueousMTRPQLHNWLAWRRELGLPPVPQQTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK
Ga0212029_103714133300022063AqueousMTRVQLHQWLAWRKELGLPPVPQATVNNLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKP
Ga0212024_108134223300022065AqueousMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFVIDQPRNVQAFRKVTYLWGLIKVYKPIKLDK
Ga0196897_104234623300022158AqueousMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0212020_104784933300022167AqueousQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKVKQ
Ga0196891_106220443300022183AqueousAWRKELGLPHVPQKVVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKIDK
Ga0196899_111415513300022187AqueousMTRPELHNWLAWRRELGLPHVPQKVVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGL
Ga0196899_117246323300022187AqueousMTRPELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0196905_105047433300022198AqueousMTRVQLHQWLAWRKELGLPPVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0196905_107336223300022198AqueousMTRPQLHQWLAWRKELGLPPVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKIDK
Ga0196905_118948823300022198AqueousMTRPQLHQWLAWRKELGLPPVPQKTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Ga0196901_110383833300022200AqueousMTRVQLHQWLAWRKELGLPPVPQQTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLSK
Ga0208303_105240033300025543AqueousMTRPQLHNWLAWRRELGLPPVPQKTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK
Ga0208149_113484423300025610AqueousMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKVKQ
Ga0208004_103062543300025630AqueousMTRPELYQWLAWRKELGLPHVPQKVVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0208161_102144433300025646AqueousMTRPQLHQWLAWRRELGLPPVPQQTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK
Ga0208161_102373843300025646AqueousMTRVQLHQWLAWRKELGLPPVPQATVNNLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLNK
Ga0208161_104401723300025646AqueousMTRVQLHQWLAWRKELGLPPVPQQTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0208161_115661823300025646AqueousMTRPQLHNWLAWRRELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLSK
Ga0208795_106928733300025655AqueousMTRPQLHQWLAWRKELGLPPVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0208898_1010443113300025671AqueousMTRPELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLNK
Ga0208898_107584913300025671AqueousMTRPELHNWLAWRRELGLPHVPQKVVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0208898_116380713300025671AqueousMTRPELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPI
Ga0208899_1010316123300025759AqueousMTRPQLHNWLAWRKELGLPHVPQKTVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Ga0208899_105907433300025759AqueousMTRPELYQWLAWRKELGLPHVPQKVVNDLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKIDK
Ga0208899_108314153300025759AqueousMTRPELYQWLAWRKELGLPHVPQKVVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLI
Ga0208767_104165233300025769AqueousMTRPQLHNWLAWRRELGLPPVPQNIVNDLLNDRRTFTIDQPRTIQAFRKVTYLWGLITLYKRVQLPNQ
Ga0208767_113812013300025769AqueousMTRVQLHQWLAWRKELGLPPVPQATVNNLLNDRRTFVIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Ga0208785_110152923300025815AqueousMTRPELHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKVKQ
Ga0208547_119786223300025828AqueousMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKVKQ
Ga0208645_126145913300025853AqueousMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKVK
Ga0208644_130074223300025889AqueousMTRPELYQWLAWRKELGLPHVSQKTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPIKLDK
Ga0209536_10060483313300027917Marine SedimentMTRPQLHNWLAWRRELGLPPVPQQTVNDLLNDRRTFVIDQPRSVQAFRKVTYLWGLIKVYKPIKLDK
Ga0348335_133776_433_6363300034374AqueousMTRPELHNWLAWRRELGLPHVPQKTVNDLLNDRRTFIIDQPRSVQAFRKVTYLWGLIKVYKPIKLSK
Ga0348336_052073_1488_16763300034375AqueousMTRPQLHNWLAWRKELGLPPVPQQTVNDLLNDRRTFIIDQPRTVQAFRKVTYLWGLIKVYKPI

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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