Metagenome / Metatranscriptome Family F100708

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100708
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	80 residues
Representative Sequence	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE
Number of Associated Samples	71
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.82 %
% of genes near scaffold ends (potentially truncated)	13.73 %
% of genes from short scaffolds (< 2000 bps)	72.55 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (42.157 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (27.451 % of family members)
Environment Ontology (ENVO)	Unclassified (70.588 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.55% β-sheet: 0.00% Coil/Unstructured: 75.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07486	Hydrolase_2	42.16
PF00565	SNase	24.51
PF12705	PDDEXK_1	5.88
PF11753	DUF3310	4.90
PF01612	DNA_pol_A_exo1	3.92
PF00271	Helicase_C	2.94
PF07728	AAA_5	1.96
PF13203	DUF2201_N	1.96
PF10991	DUF2815	0.98
PF11348	DUF3150	0.98
PF13443	HTH_26	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	42.16

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.84 %
Unclassified	root	N/A	42.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
cellular organisms	root	All Organisms → cellular organisms	34.31 %
Viruses	superkingdom	All Organisms → Viruses	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.55 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	20.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.55 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	20.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.55 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	20.59 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	20.59 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.55 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	20.59 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	2.94 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10001111	Not Available	22141	Open in IMG/M
3300000101\|DelMOSum2010_c10055315	All Organisms → Viruses → Predicted Viral	1949	Open in IMG/M
3300001351\|JGI20153J14318_10000894	Not Available	24099	Open in IMG/M
3300001938\|GOS2221_1004996	All Organisms → Viruses → Predicted Viral	2924	Open in IMG/M
3300002131\|M2t2BS1_1190883	Not Available	12183	Open in IMG/M
3300002144\|M2t2BS2_10383407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1626	Open in IMG/M
3300003346\|JGI26081J50195_1003132	Not Available	5512	Open in IMG/M
3300004941\|Ga0068514_1013333	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300006029\|Ga0075466_1170643	Not Available	551	Open in IMG/M
3300006802\|Ga0070749_10231269	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1051	Open in IMG/M
3300006802\|Ga0070749_10374250	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300006802\|Ga0070749_10415093	Not Available	741	Open in IMG/M
3300006802\|Ga0070749_10650603	Not Available	566	Open in IMG/M
3300006803\|Ga0075467_10598832	Not Available	563	Open in IMG/M
3300006810\|Ga0070754_10022743	All Organisms → Viruses → Predicted Viral	3619	Open in IMG/M
3300006810\|Ga0070754_10158219	All Organisms → Viruses → Predicted Viral	1078	Open in IMG/M
3300006920\|Ga0070748_1181196	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300007229\|Ga0075468_10114882	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300007229\|Ga0075468_10142085	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300007276\|Ga0070747_1036795	All Organisms → Viruses → Predicted Viral	1917	Open in IMG/M
3300007276\|Ga0070747_1083377	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1191	Open in IMG/M
3300007276\|Ga0070747_1161729	Not Available	801	Open in IMG/M
3300007344\|Ga0070745_1197012	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300007540\|Ga0099847_1002886	All Organisms → cellular organisms → Bacteria → Proteobacteria	5934	Open in IMG/M
3300007540\|Ga0099847_1239863	Not Available	523	Open in IMG/M
3300009074\|Ga0115549_1001557	Not Available	13699	Open in IMG/M
3300009074\|Ga0115549_1084813	All Organisms → Viruses → Predicted Viral	1075	Open in IMG/M
3300009076\|Ga0115550_1002583	Not Available	12300	Open in IMG/M
3300009076\|Ga0115550_1003924	Not Available	9461	Open in IMG/M
3300009149\|Ga0114918_10567546	Not Available	602	Open in IMG/M
3300009435\|Ga0115546_1120667	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	940	Open in IMG/M
3300009505\|Ga0115564_10591700	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	524	Open in IMG/M
3300009507\|Ga0115572_10004277	Not Available	11145	Open in IMG/M
3300011012\|Ga0150979_1143434	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	596	Open in IMG/M
3300011118\|Ga0114922_11347042	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	575	Open in IMG/M
3300011253\|Ga0151671_1022056	All Organisms → Viruses → Predicted Viral	2165	Open in IMG/M
3300011258\|Ga0151677_1008426	All Organisms → Viruses → Predicted Viral	4222	Open in IMG/M
3300017741\|Ga0181421_1047346	All Organisms → Viruses → Predicted Viral	1146	Open in IMG/M
3300017751\|Ga0187219_1203314	Not Available	547	Open in IMG/M
3300017762\|Ga0181422_1162168	Not Available	683	Open in IMG/M
3300018682\|Ga0188851_1002000	All Organisms → Viruses → Predicted Viral	3326	Open in IMG/M
3300018682\|Ga0188851_1002563	All Organisms → Viruses → Predicted Viral	2896	Open in IMG/M
3300019098\|Ga0188859_1005750	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300019122\|Ga0188839_1022142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	655	Open in IMG/M
3300019122\|Ga0188839_1025655	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300020166\|Ga0206128_1000848	Not Available	33103	Open in IMG/M
3300020166\|Ga0206128_1004099	Not Available	11570	Open in IMG/M
3300020166\|Ga0206128_1210989	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	738	Open in IMG/M
3300020169\|Ga0206127_1106030	Not Available	1176	Open in IMG/M
3300020182\|Ga0206129_10155792	All Organisms → Viruses → Predicted Viral	1073	Open in IMG/M
3300021085\|Ga0206677_10001770	All Organisms → cellular organisms → Bacteria	19770	Open in IMG/M
3300021960\|Ga0222715_10018083	Not Available	5338	Open in IMG/M
3300021961\|Ga0222714_10004224	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	14221	Open in IMG/M
3300021964\|Ga0222719_10283824	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1082	Open in IMG/M
3300022053\|Ga0212030_1062157	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	532	Open in IMG/M
3300022072\|Ga0196889_1054644	Not Available	769	Open in IMG/M
3300022169\|Ga0196903_1007391	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1406	Open in IMG/M
3300022178\|Ga0196887_1000293	Not Available	24710	Open in IMG/M
3300022201\|Ga0224503_10233248	Not Available	602	Open in IMG/M
(restricted) 3300023109\|Ga0233432_10271914	Not Available	799	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10000357	Not Available	26719	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10206480	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	853	Open in IMG/M
(restricted) 3300023276\|Ga0233410_10293918	Not Available	530	Open in IMG/M
3300024262\|Ga0210003_1064019	All Organisms → Viruses → Predicted Viral	1802	Open in IMG/M
3300024262\|Ga0210003_1360550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	538	Open in IMG/M
(restricted) 3300024528\|Ga0255045_10110917	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1008	Open in IMG/M
3300025543\|Ga0208303_1000233	Not Available	23451	Open in IMG/M
3300025594\|Ga0209094_1032373	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1499	Open in IMG/M
3300025645\|Ga0208643_1081797	Not Available	919	Open in IMG/M
3300025652\|Ga0208134_1107973	Not Available	759	Open in IMG/M
3300025671\|Ga0208898_1047244	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1593	Open in IMG/M
3300025684\|Ga0209652_1004378	Not Available	9947	Open in IMG/M
3300025767\|Ga0209137_1149830	All Organisms → Viruses	850	Open in IMG/M
3300025767\|Ga0209137_1194058	Not Available	691	Open in IMG/M
3300025880\|Ga0209534_10096553	All Organisms → Viruses → Predicted Viral	1696	Open in IMG/M
3300025889\|Ga0208644_1208294	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	843	Open in IMG/M
3300025889\|Ga0208644_1363618	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	546	Open in IMG/M
3300027612\|Ga0209037_1036266	All Organisms → Viruses → Predicted Viral	1227	Open in IMG/M
(restricted) 3300027837\|Ga0255041_10196518	Not Available	709	Open in IMG/M
(restricted) 3300027996\|Ga0233413_10493880	Not Available	541	Open in IMG/M
3300031539\|Ga0307380_10263000	Not Available	1623	Open in IMG/M
3300031539\|Ga0307380_10821156	Not Available	765	Open in IMG/M
3300031565\|Ga0307379_10040558	Not Available	5474	Open in IMG/M
3300031565\|Ga0307379_10447846	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1223	Open in IMG/M
3300031565\|Ga0307379_10693819	Not Available	915	Open in IMG/M
3300031566\|Ga0307378_10156108	All Organisms → Viruses → Predicted Viral	2294	Open in IMG/M
3300031566\|Ga0307378_10201710	All Organisms → Viruses → Predicted Viral	1953	Open in IMG/M
3300031566\|Ga0307378_10478565	All Organisms → Viruses → Predicted Viral	1122	Open in IMG/M
3300031578\|Ga0307376_10342722	Not Available	991	Open in IMG/M
3300031578\|Ga0307376_10398738	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	904	Open in IMG/M
3300031578\|Ga0307376_10705030	Not Available	632	Open in IMG/M
3300031578\|Ga0307376_10889148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	544	Open in IMG/M
3300031669\|Ga0307375_10118214	All Organisms → Viruses → Predicted Viral	1880	Open in IMG/M
3300031669\|Ga0307375_10119794	All Organisms → Viruses → Predicted Viral	1864	Open in IMG/M
3300031673\|Ga0307377_10125971	All Organisms → Viruses → Predicted Viral	2048	Open in IMG/M
3300031673\|Ga0307377_10231442	All Organisms → Viruses → Predicted Viral	1424	Open in IMG/M
3300031673\|Ga0307377_10248173	All Organisms → Viruses → Predicted Viral	1366	Open in IMG/M
3300031673\|Ga0307377_10915671	Not Available	596	Open in IMG/M
3300031851\|Ga0315320_10753648	Not Available	618	Open in IMG/M
3300032088\|Ga0315321_10395660	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	859	Open in IMG/M
3300032277\|Ga0316202_10101301	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1335	Open in IMG/M
3300034374\|Ga0348335_003491	Not Available	10415	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	82.35%
Terrestrial	Environmental → Terrestrial	17.65%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	75.49%
Soil	Environmental → Terrestrial → Soil	17.65%
Freshwater	Environmental → Aquatic → Freshwater	4.90%
Unclassified	Environmental → Aquatic → Unclassified	1.96%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	30.39%
Clay	Environmental → Terrestrial → Soil → Clay	17.65%
Pelagic	Environmental → Aquatic → Marine → Pelagic	13.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.90%
Inlet	Environmental → Aquatic → Marine → Inlet	4.90%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.90%
Strait	Environmental → Aquatic → Marine → Strait	4.90%
Oceanic	Environmental → Aquatic → Marine → Oceanic	3.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.96%
Sediment	Environmental → Aquatic → Marine → Sediment	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.41%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	17.65%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	13.73%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	8.82%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	4.90%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	3.92%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.96%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.98%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	27.45%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	17.65%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	7.84%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	5.88%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	4.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	4.90%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	4.90%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	4.90%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	3.92%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.94%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.96%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.96%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.96%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	1.96%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	0.98%
Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Marine	0.98%
Marine Water	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water	0.98%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300001938	Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005	Environmental	Open in IMG/M
3300002131	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS1 (111f)	Environmental	Open in IMG/M
3300002144	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS2 (113f)	Environmental	Open in IMG/M
3300003346	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA	Environmental	Open in IMG/M
3300004941	Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-0.2um	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300011012	Marine surface microbial communities from Baltic Sea. Combined Assembly of 24 SPs	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300011253	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeate	Environmental	Open in IMG/M
3300011258	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeate	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300018682	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_0p1	Environmental	Open in IMG/M
3300019098	Metatranscriptome of marine microbial communities from Baltic Sea - GS684_0p1	Environmental	Open in IMG/M
3300019122	Metatranscriptome of marine microbial communities from Baltic Sea - GS677_0p1	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022053	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022169	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022201	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21	Environmental	Open in IMG/M
3300023109 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300023276 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_1_MG	Environmental	Open in IMG/M
3300024262	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)	Environmental	Open in IMG/M
3300024528 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025594	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025684	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027612	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_125SG_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300027837 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3	Environmental	Open in IMG/M
3300027996 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MG	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100011118	3300000101	Marine	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFGSLTDPTNRDIGAMRPTKNKGGSE*
DelMOSum2010_100553153	3300000101	Marine	VTTTRVDKLTGEERDRLREELAQQIKEYLAKGGKVTQCPPRTFTKRDGAKRKFDGSQFDSLTDPSNRDVGAVRPTKNKGGSE*
JGI20153J14318_1000089422	3300001351	Pelagic Marine	VTTTKINVMTPVEKERLSLELERQVREYVEAGGTVTQCPPRAFTQRDKTKRKFDGSQFDSLTDPSNRDIGAMRPTKNKGGSE*
GOS2221_10049966	3300001938	Marine	VTTTKIDIMTANEKEKLRLELERQIKAYAAAGGKVTQCPPRAFTPTEGPKKRFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE*
M2t2BS1_119088325	3300002131	Marine	VTTTRVDKPTGEERDRLREELAQQIKEYLAKGGKVTQCPDRTFTQTEGPRRKFDGGRNDSLTDPTNRDIGAMRPTKNKGGSE*
M2t2BS2_103834072	3300002144	Marine	VTTTRVDKPTGEERDRLREELAQQIKEYLAKGGKVTQCPDRTFTQTEGPRRKFDGGRNDSLTDPTNRDIGATRPTKNKGGSE*
JGI26081J50195_10031322	3300003346	Marine	VTTTKIDVQTKEKREALSAEIAKQVEEFLAKGGTVTQCPPRAFTKTEGYAKKFAGSQFDSLTDPSNRDVGATRPTKNKGGSE*
Ga0068514_10133332	3300004941	Marine Water	VTTTKIDVMTPAEKEKLRIELERQVKEYVKAGGVVTQCPPRAFTPEEGPKKRFSGGQYDSLTDPTNRDIGAIRPTKNKGGSD*
Ga0075466_11706432	3300006029	Aqueous	VTTTRVNKLTGEERDRLREELAQQIKEYLAKGGKVTQCPPRAFTKRDGAKRKFDGSQFDSLTDPSNRDVGAMRPTKNKGGSE*
Ga0070749_102312691	3300006802	Aqueous	TTTRVDKPTGEERDHLREELAQQIKEYLAKGGKVTQCPPRAFTKRDGAKRKFDGSQFDSLTDPSNRDVGAMRPTKNKGGSE*
Ga0070749_103742502	3300006802	Aqueous	VTTTKIDVKTKETRDRLLEELAQQIKEYLAKGGKVTQCPDRTFTQTEGPRRKFDGGRNDSLTDPTNRDVGAMRPTKNKGGSE*
Ga0070749_104150932	3300006802	Aqueous	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTQVEGPKQRFSSGRFDSLTDPTNRDIGAMRPTKNKGGSE*
Ga0070749_106506031	3300006802	Aqueous	LVTTTRVDKPTGEERDHLREELAQQIKEYLAKGGKVTQCPPRAFTQRDGPRRKFDGGRNDSLTDPTNRDVGAMRPTKREGKLNGS*
Ga0075467_105988321	3300006803	Aqueous	VTTTKIDIDTEEQKDEQCEELAQQIKEYLAKGGKVTQCPPRAFTPDEGPKRKFAGSRFDSLTDPTNRDVGAVRPTKNKGGNE*
Ga0070754_100227437	3300006810	Aqueous	VTTTKIDIDTEEQKDVQREELARQIKAYLSKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDIGAMRPTKNKGGSE*
Ga0070754_101582193	3300006810	Aqueous	VTTTKIDIDTEEQKDKQREELAQQIKEYLAKGGKVTQCPPRAFTPTEGPKQRFSGSRFDSLTDPTNRDVGAMRPTKNKGGSE*
Ga0070748_11811962	3300006920	Aqueous	VTTTRVDKLTDEERDRLREELAQQLRDYLAKGGKVTQCPPRAFTPDEGPKRKFAGSRFDSLTDPTNRDVGAVRPTKNKGGNE*
Ga0075468_101148822	3300007229	Aqueous	VTTTKIDIDTEEQKDAQREELAQQIKEYLAKGGKVTQCPPRAFTPTEGPKQRFSGSRFDSLTDPTNRDIGAMRPTKNKGGNE*
Ga0075468_101420852	3300007229	Aqueous	VTTTRVDKLTDEERDRLREELAQQLRDYLAKGGKVTQCPPRAFTPDEGPKRKFAGSRFDSLTDPTNRDVGAVRPTKNKGGSE*
Ga0070747_10367954	3300007276	Aqueous	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE*
Ga0070747_10833773	3300007276	Aqueous	VTTTKINVMTREEKEKLRAELDRQIEEYLDKGGEVTQCPPRAFTSTEGPRRKFDGGRNASLTDPTNRDIGAHRPTKKEQ*
Ga0070747_11617291	3300007276	Aqueous	VTTTRVDKLTDEERDRLREELAQQLRDYLAKGGKVTQCPPRAFTPDEGPKRKFAGSRFDSLTDPTNRDVGAVRPTKNKG
Ga0070745_11970122	3300007344	Aqueous	VTTTRVDKLTGEERDRLREELAQQIKEYLAKGGKVTQCPPRAFTQRDGPRRKFDGGRNDSLTDPTNRDVGAMRPTKNKGGSE*
Ga0099847_10028863	3300007540	Aqueous	VTTTKINVMTREEKEKLRAELDRQIEEYLDKGGEVTQCPPRAFTSTEGPRRKFDGGRNASLTDPTNRDIGAHRPTKRSNKLNV*
Ga0099847_12398632	3300007540	Aqueous	VTTTRVDKLTDEERDRLREELAQQLRDYLAKGGKVTQCPPRAFTPDEGPKRKFAGSRFDSLTDPTNRDVGAVRP
Ga0115549_100155710	3300009074	Pelagic Marine	VTTTKINVMTREEKEKLRAELDRQIEEYLDKGGEVTQCPPRAFTPTEGPRRKFDGGRNASLTDPTNRDVGAIRPTKRSNKLNV*
Ga0115549_10848133	3300009074	Pelagic Marine	VTTTRVDKSTGEERDRLREELAQQIKEYLAKGGKVTQCPPRAFTPTEGPKKRFAGSQFDSLTDPTNRDIGAMRPTKNKGGSE*
Ga0115550_100258313	3300009076	Pelagic Marine	MTPVEKERLSLELERQVREYVEAGGTVTQCPPRAFTQRDKTKRKFDGSQFDSLTDPSNRDIGAMRPTKNKGGSE*
Ga0115550_100392417	3300009076	Pelagic Marine	VTTTKVDKMTREEKERLRVELERQVKEYTEAGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPTNRDVGAVRPTKNKGGSE*
Ga0114918_105675461	3300009149	Deep Subsurface	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDVGAMRPTKREGKLNGS*
Ga0115546_11206672	3300009435	Pelagic Marine	MTREEKEKLRAELDRQIEEYLDKGGEVTQCPPRAFTPTEGPRRKFDGGRNASLTDPTNRDVGAIRPTKRSNKLNV*
Ga0115564_105917002	3300009505	Pelagic Marine	VTTTRVDKSTGEKRDRLREELAQQIKEYLAKGGKVTQCPPRTFTQTDGPKRRFDGGRNDSLTDPTNRDIGAMRPTKNKGESE*
Ga0115572_100042778	3300009507	Pelagic Marine	MTPVEKERLSLELERQVREYVEAGGTVTQCPSRTFTQRDGPRRKFDGGRNDSLTDPSNRDIGAMRPTKNKGGSE*
Ga0150979_11434341	3300011012	Marine	KTKEARDRLREELAQQIKEYLAKGGKVTQCPDRTFTQTEGPKRKFDGGRNDSLTDPTNRDIGATRPTKNKGGSE*
Ga0114922_113470422	3300011118	Deep Subsurface	MTREEKERLRVELERQVKAYAAAGGKITQCPPRAFTPTEGPKKKFAGSQFDSLTDPTNRDVGAMRPTKNKGESE*
Ga0151671_10220563	3300011253	Marine	MTPAEKERLSLELERQVKEYVKAGGKVTQCPPRTFTKTEGPKRKFEGGRYDSMTDPYNRDIGAMRPTKNKRGDE*
Ga0151677_10084266	3300011258	Marine	MTREEKERLRLELERQVKEYVEAGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPSNRDVGAMRPTKNKGGSE*
Ga0181421_10473462	3300017741	Seawater	VTTTKIDRPTLNEKEKHSAKLAQQIAEYLAKGGTVTRCPPRAFTPTEGPKKKFAGSQFDSLTDPSNRDVGAIRPTKNKGGSE
Ga0187219_12033141	3300017751	Seawater	VTTTKIDRPTLNEKEKHSAKLAQQVAEYLAKGGTVTRCPPRAFTPTEGPKKKFAGSQFDSLTDPSNRDVGAIRPTKNKGGSE
Ga0181422_11621681	3300017762	Seawater	VTTTKINVPTKGEKEKHSAKLAQQVAEYLAKGGTVTRCPPRAFTPTEGPKKKFAGSQFDSLTDPSNRDVGAIRPTKNKGGSE
Ga0188851_10020003	3300018682	Freshwater Lake	VTTTKIDVKTKETRDRLREELAQQIKEYLAKGGKVTQCPDRTFTQTEGPKRKFDGGRNDSLTDPTNRDIGATRPTKNKGGSE
Ga0188851_10025632	3300018682	Freshwater Lake	VTTTKIDVRTKEQKDAQREALARHVKEYLANGGTVTQCPPRAFTPTEGPRRKFDGGRNDSLTDPTNRDVGAHRPTKKEQ
Ga0188859_10057502	3300019098	Freshwater Lake	VTTTKIDIDTEEQKDEQREELAQQIKEYLAKGGKVTQCPPRTFTQVEGPKQRFSGSRFDSLTDPTNRDVGAMRPTKNKGESE
Ga0188839_10221422	3300019122	Freshwater Lake	VTTTKIDIDTEEQKDAQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDIGAVRPTKNKGGSE
Ga0188839_10256552	3300019122	Freshwater Lake	VTTTKIDIDTEEQKDAQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPSNRDIGAMRPTKNKGESE
Ga0206128_10008487	3300020166	Seawater	VTTTKINVMTPVEKERLSLELERQVREYVEAGGTVTQCPPRAFTQRDKTKRKFDGSQFDSLTDPSNRDIGAMRPTKNKGGSE
Ga0206128_100409924	3300020166	Seawater	VTTTKINVMTREEKEKLRAELDRQIEEYLDKGGEVTQCPPRAFTPTEGPRRKFDGGRNASLTDPTNRDVGAIRPTKRSNKLNV
Ga0206128_12109892	3300020166	Seawater	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTQTDGPKRRFDGGRNDSLTDPTNRDIGAMRPTKNKGESE
Ga0206127_11060304	3300020169	Seawater	VTTTKIDVKTKEVRDALSANIARHVKEYLAKGGKVTQCPPHAFTQRDGPRRKFDGGRNDSLTDPSNRDIGAMRPTKNKGGSE
Ga0206129_101557921	3300020182	Seawater	VTTTKINVMTPVEKERLSLELERQVREYVEAGGTVTQCPSRTFTQRDGPRRKFDGGRNDSLTDPTNRDIGAVRPTKNKGGSE
Ga0206677_1000177019	3300021085	Seawater	VTTTKVNKITPEERDLLREELAQQIKNYLKKGGTITKCPPRAFTPDQGPKKKFAGSQFDSLTDPTNRDVGAVRPTKNKGGSD
Ga0222715_100180837	3300021960	Estuarine Water	VTTTKIDIMTPADKERLSLELERQVKEYVKAGGVVTQCPPRAFTAEEGPKKRFSGGQFDSLTDPTNRDVGAVRPTKNKGQQE
Ga0222714_100042248	3300021961	Estuarine Water	VTTTKIDIMTPADKERLSLELERQVKEYVKAGGVVTQCPPRAFTAEEGPKKRFSGGQFDSLTDPTNRDVGAVRPTKNKGGNE
Ga0222719_102838244	3300021964	Estuarine Water	VTTTWINVLTPEQREEQRKELARQVDEFLANGGKITQCPPRAFTPDEGPKRKFAGSQFDSLTDPTNRDVGAMRPTKREREN
Ga0212030_10621571	3300022053	Aqueous	EEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE
Ga0196889_10546442	3300022072	Aqueous	VTTTKIDIDTEEQKDAQREELAQQIKEYLAKGGKVTQCPPRAFTPTEGPKQRFSGSRFDSLTDPTNRDIGAMRPTKNKGGNE
Ga0196903_10073913	3300022169	Aqueous	VTTTKINVMTREEKEKLRAELDRQIEEYLDKGGEVTQCPPRAFTSTEGPRRKFDGGRNASLTDPTNRDIGAHRPTKRSNKLNV
Ga0196887_100029312	3300022178	Aqueous	VTTTRVDKLTDEERDRLREELAQQLRDYLAKGGKVTQCPPRAFTPDEGPKRKFAGSRFDSLTDPTNRDVGAVRPTKNKGGSE
Ga0224503_102332481	3300022201	Sediment	VTTTKIDRPTLNEKEKHSAKLAQQVAGYLAKGGTVTRCPPRAFTPTEGPKKKFAGSQFDSLTDPSNRDVGAIRPTKNKGGSE
(restricted) Ga0233432_102719142	3300023109	Seawater	VTTTKINVMTPAEKDRLRLELERQVKEYTEAGGTVTQCPPRAFTKVEGYAKKFAGSQFDSLTDPSNRDVGAHRPTKNKGGSE
(restricted) Ga0233412_1000035717	3300023210	Seawater	VTTTKIDVMTPAEKERLRMELERQVKEYKKAGGVVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE
(restricted) Ga0233412_102064801	3300023210	Seawater	VTTTKVDKMTREEKERLRVELERQVKEYTEAGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPSNRDIGAMRPTKNKGGSE
(restricted) Ga0233410_102939182	3300023276	Seawater	VTTTKIDKMTREEKERLRVELERQVKEYTEAGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE
Ga0210003_10640193	3300024262	Deep Subsurface	VTTTKVDKMTREEKERLRVELERQVKEYTEAGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPTNRDVGAVRPTKNKGGSE
Ga0210003_13605502	3300024262	Deep Subsurface	MTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSRFDSLTDPTNRDIGATRPTKNKGGSE
(restricted) Ga0255045_101109172	3300024528	Seawater	VTTTKINVMTPVEKKRLSLELERQVREYVEAGGTVTQCPARTFTKRDKTKRKFDGSQFDSLTDPSNRDIGAMRPTKNKGGSE
Ga0208303_100023312	3300025543	Aqueous	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE
Ga0209094_10323731	3300025594	Pelagic Marine	VTTTRVDKSTGEERDRLREELAQQIKEYLAKGGKVTQCPPRAFTPTEGPKKRFAGSQFDSLTDPTNRDIGAMRPTKNKGGSE
Ga0208643_10817972	3300025645	Aqueous	VTTTRVDKLTDEERDRLREELAQQLRDYLAKGGKVTQCPPRAFTPDEGPKRKFAGSRFDSLTDPTNRDVGAVRPTKNKGGNE
Ga0208134_11079732	3300025652	Aqueous	VTTTRVNKLTGEERDRLREELAQQIKEYLAKGGKVTQCPPRAFTKRDGAKRKFDGSQFDSLTDPSNRDVGAMRPTKNKGGSE
Ga0208898_10472441	3300025671	Aqueous	VTTTKIDIDTEEQKDVQREELARQIKAYLSKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDIGAMRPTKNKGGSE
Ga0209652_10043786	3300025684	Marine	VTTTKIDVQTKEKREALSAEIAKQVEEFLAKGGTVTQCPPRAFTKTEGYAKKFAGSQFDSLTDPSNRDVGATRPTKNKGGSE
Ga0209137_11498302	3300025767	Marine	VTTTKIDVQTKEKREALSAEIAKQVEEFLAKGGTVTQCPPRAFTKTEGYAKKFAGSQFDSLTDPSNRDVGAIRPTKNKGGSE
Ga0209137_11940582	3300025767	Marine	VTTTKIDVRTKEQKDAQREALARHVKEFLANGGTITQCPDRTFTQFEGPKRKFDGGRNDSLTDPTNRDIGATRPTKNKGGSE
Ga0209534_100965533	3300025880	Pelagic Marine	VTTTKIDVKTKEVRAALSANIARHVKEYLANGGTVTQCPPRAFTPTEGPRRKFDGGRNASLTDPTNRDVGAIRPTKRSNKLNV
Ga0208644_12082943	3300025889	Aqueous	RLREELAQQIKEYLAKGGKVTQCPPRAFTKRDGAKRKFDGSQFDSLTDPSNRDVGAMRPTKNKGGSE
Ga0208644_13636181	3300025889	Aqueous	TTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTQVEGPKQRFSGGRFDSLTDPTNRDIGAMRPTKNKGGSE
Ga0209037_10362663	3300027612	Marine	VTTTKINVMTPVEKARLSLELERQVREYVEAGGTVTQCPPRTFTKRDKTKRKFDGSQFDSLTDPSNRDIGAMRPTKNKGGSE
(restricted) Ga0255041_101965182	3300027837	Seawater	VTTTKVDKMTREEKERLRVELERQVKEYTEAGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPSNRDIGA
(restricted) Ga0233413_104938802	3300027996	Seawater	VTTTKVDKMTREEKERLRVELERQVKEYTEAGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE
Ga0307380_102630004	3300031539	Soil	QREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE
Ga0307380_108211561	3300031539	Soil	VTTTKIDVKTKEARDRLREELAQQIKEYLAKGGKVTQCPDRTFTQTEGPKRKFDGGRNDSLTDPTNRDIGATRPTKNKGGSE
Ga0307379_100405584	3300031565	Soil	VTTTKIDVRTKEQKDAQREALAQQIKEYLAKGGKVTQCPDRTFTQTEGPKRKFDGGRNDSLTDPTNRDIGATRPTKNKGGSE
Ga0307379_104478462	3300031565	Soil	VTTTKVDKMTREEKERLRVALERQVKAYAAAGGKITQCPPRAFTPTEGPKKKFAGSRFDSLTDPTNRDVGAIRPTKNKGESE
Ga0307379_106938191	3300031565	Soil	TREEKERLRVELERQVKEYTEAGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPTNRDVGAVRPTKNKGGSE
Ga0307378_101561085	3300031566	Soil	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDVGAVRPTKNKGGSE
Ga0307378_102017102	3300031566	Soil	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPSNRDIGAMRPTKNKGESE
Ga0307378_104785654	3300031566	Soil	KIDVKTKEARDRLREELAQQIKEYLAKGGKVTQCPDRTFTQTEGPKRKFDGGRNDSLTDPTNRDIGATRPTKNKGGSE
Ga0307376_103427222	3300031578	Soil	VTTTKIDIDTEEQKDVQREELARQIKAYLAKRGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDVGAMRPTKNKGGSE
Ga0307376_103987381	3300031578	Soil	MTREKKERLRVELERQVKAYAAAGGKITQCPPRAFTPTEGPKKKFAGSQFDSLTDPTNRDVGAMRPTKREGKLNGS
Ga0307376_107050302	3300031578	Soil	VTTTKIDIDTEEQKDAQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDTGAVRPTKNKGGSE
Ga0307376_108891482	3300031578	Soil	MTANEKEKLRLELERQIKAYAAAGGKVTQCPPRTFTLEKGPKKRFAGSQFDSLTDPTNRDVGAVRPTKNKGGSE
Ga0307375_101182144	3300031669	Soil	VTTTKIDIDTEEQKDVQREELARQIKAYLAKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDIGAMRPTKNKGESE
Ga0307375_101197947	3300031669	Soil	VTTTKIDVKTKEARDRLREELAQQIKEYLAKGGKVTQCPDRTFTQTEGPKRKFDGGRNDSLTDPTNRDVGAVRPTKNKGGSE
Ga0307377_101259713	3300031673	Soil	VTTTKVDKMTREEKERLRVELERQVKEYTEAGGTVTQCPPRAFTQTEGPMKRFSGSQFDSLTDPTNRDVGAVRPTKNKGGSE
Ga0307377_102314421	3300031673	Soil	VTTTKIDVRTKEQKDAQREALAQQIKEYLAKGGKVTQCPDRTFTQTEGPRRKFDGGRNDSLTDPTNRDIGATRPTKNKGGSE
Ga0307377_102481734	3300031673	Soil	VTTTKVDKMTREEKERLRVALERQVKAYAAAGGKITQCPPRAFTPTEGPKKKFAGSQFDSLTDPTNRDVGAIRPTKREGKLNGS
Ga0307377_109156711	3300031673	Soil	VTTTKIDVKTKEVRDALSANIARHVKEYLANGGTVTQCPPRAFTPTEGPRRKFDGGRNDSLTDPTNRDVGAHRPTKNKGGSE
Ga0315320_107536481	3300031851	Seawater	VTTTKINVMTREEKEKLRAELERQVAEYLDKGGEVTQCPPRAFTKVEGYAKKFAGSQFDSLTDPSNRDVGAMRPTKNKGGSE
Ga0315321_103956602	3300032088	Seawater	VTTTKINVMTPAEKERLSLELERQVREYVEAGGTVTQCPPRAFTKVEGYAKKFAGSQFDSLTDPSNRDIGAMRPTKNKGGSE
Ga0316202_101013014	3300032277	Microbial Mat	VTTTRVDKLTDEERDRLREELAQQLRDYLAKGGTVTQCPPRAFTPDEGPKRKFAGSQFDSLTDPTNRDVGAMRPTKREGKLNGS
Ga0348335_003491_1208_1456	3300034374	Aqueous	MTTTKIDIDTEEQKDVQREELARQIKAYLSKGGKVTQCPPRTFTPTEGPKKRFAGSQFDSLTDPTNRDIGAMRPTKNKGGSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters