Metagenome / Metatranscriptome Family F100640

Basic Information
Family ID	F100640
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	41 residues
Representative Sequence	LLQELAAEVAGWPDAPSEAETAAMLRPVGRNFIPDRYR
Number of Associated Samples	95
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.02 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Unclassified (76.471 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.274 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.157 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.30% β-sheet: 0.00% Coil/Unstructured: 69.70%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08245	Mur_ligase_M	68.63
PF13599	Pentapeptide_4	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
All Organisms	root	All Organisms	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
cellular organisms	root	All Organisms → cellular organisms	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.47 %
Candidatus Frankia datiscae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia datiscae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_125841	Not Available	628	Open in IMG/M
3300001356\|JGI12269J14319_10142991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1044	Open in IMG/M
3300004092\|Ga0062389_101440225	Not Available	873	Open in IMG/M
3300005186\|Ga0066676_11033173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300005339\|Ga0070660_100362649	Not Available	1194	Open in IMG/M
3300005434\|Ga0070709_10285715	Not Available	1200	Open in IMG/M
3300005541\|Ga0070733_10983687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300005546\|Ga0070696_100223589	Not Available	1413	Open in IMG/M
3300005564\|Ga0070664_101685696	Not Available	601	Open in IMG/M
3300005575\|Ga0066702_10807320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300005602\|Ga0070762_11249094	Not Available	515	Open in IMG/M
3300006806\|Ga0079220_11525109	Not Available	575	Open in IMG/M
3300009029\|Ga0066793_10593312	Not Available	631	Open in IMG/M
3300009148\|Ga0105243_10284193	Not Available	1492	Open in IMG/M
3300009162\|Ga0075423_10658586	Not Available	1104	Open in IMG/M
3300009683\|Ga0116224_10379283	Not Available	673	Open in IMG/M
3300009698\|Ga0116216_10077347	Not Available	2048	Open in IMG/M
3300010152\|Ga0126318_10571198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300010329\|Ga0134111_10567531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300010376\|Ga0126381_105038536	Not Available	506	Open in IMG/M
3300010867\|Ga0126347_1579842	Not Available	580	Open in IMG/M
3300010880\|Ga0126350_10700600	Not Available	664	Open in IMG/M
3300010880\|Ga0126350_11673472	Not Available	565	Open in IMG/M
3300012507\|Ga0157342_1012397	Not Available	897	Open in IMG/M
3300012683\|Ga0137398_10578846	Not Available	775	Open in IMG/M
3300012955\|Ga0164298_10326869	Not Available	961	Open in IMG/M
3300012977\|Ga0134087_10655378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300013296\|Ga0157374_11119201	Not Available	808	Open in IMG/M
3300016294\|Ga0182041_12246471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300016387\|Ga0182040_11564257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300016404\|Ga0182037_10925592	Not Available	757	Open in IMG/M
3300016422\|Ga0182039_10156148	Not Available	1774	Open in IMG/M
3300017821\|Ga0187812_1161830	Not Available	719	Open in IMG/M
3300017821\|Ga0187812_1185032	Not Available	667	Open in IMG/M
3300017823\|Ga0187818_10192632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia datiscae	890	Open in IMG/M
3300017928\|Ga0187806_1040048	Not Available	1406	Open in IMG/M
3300017942\|Ga0187808_10063457	Not Available	1578	Open in IMG/M
3300017955\|Ga0187817_10164427	Not Available	1412	Open in IMG/M
3300017959\|Ga0187779_11202786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300017975\|Ga0187782_10251816	Not Available	1327	Open in IMG/M
3300017975\|Ga0187782_10806612	Not Available	726	Open in IMG/M
3300017993\|Ga0187823_10076581	Not Available	964	Open in IMG/M
3300018044\|Ga0187890_10113243	Not Available	1571	Open in IMG/M
3300018062\|Ga0187784_10965811	Not Available	678	Open in IMG/M
3300018085\|Ga0187772_10650873	Not Available	753	Open in IMG/M
3300020579\|Ga0210407_11423707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	513	Open in IMG/M
3300021180\|Ga0210396_10957279	Not Available	727	Open in IMG/M
3300021181\|Ga0210388_10786331	Not Available	825	Open in IMG/M
3300021401\|Ga0210393_10896425	Not Available	720	Open in IMG/M
3300021479\|Ga0210410_11520953	Not Available	562	Open in IMG/M
3300024186\|Ga0247688_1063233	Not Available	609	Open in IMG/M
3300024288\|Ga0179589_10132847	Not Available	1048	Open in IMG/M
3300025910\|Ga0207684_10962829	Not Available	715	Open in IMG/M
3300025926\|Ga0207659_11479657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300025939\|Ga0207665_10408750	Not Available	1035	Open in IMG/M
3300025945\|Ga0207679_10282686	Not Available	1423	Open in IMG/M
3300027696\|Ga0208696_1094505	Not Available	998	Open in IMG/M
3300027783\|Ga0209448_10077468	Not Available	1116	Open in IMG/M
3300027889\|Ga0209380_10401985	Not Available	803	Open in IMG/M
3300028773\|Ga0302234_10302114	Not Available	686	Open in IMG/M
3300028877\|Ga0302235_10396994	Not Available	590	Open in IMG/M
3300028879\|Ga0302229_10025930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3155	Open in IMG/M
3300028906\|Ga0308309_10742383	Not Available	853	Open in IMG/M
3300031199\|Ga0307495_10238581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300031543\|Ga0318516_10069748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1947	Open in IMG/M
3300031545\|Ga0318541_10351711	Not Available	823	Open in IMG/M
3300031546\|Ga0318538_10332141	Not Available	820	Open in IMG/M
3300031564\|Ga0318573_10168592	Not Available	1153	Open in IMG/M
3300031572\|Ga0318515_10243384	Not Available	965	Open in IMG/M
3300031668\|Ga0318542_10178813	Not Available	1064	Open in IMG/M
3300031680\|Ga0318574_10104149	Not Available	1576	Open in IMG/M
3300031681\|Ga0318572_10120491	Not Available	1497	Open in IMG/M
3300031682\|Ga0318560_10339229	Not Available	811	Open in IMG/M
3300031713\|Ga0318496_10040026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2401	Open in IMG/M
3300031748\|Ga0318492_10066212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1721	Open in IMG/M
3300031748\|Ga0318492_10270661	Not Available	880	Open in IMG/M
3300031764\|Ga0318535_10024955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2343	Open in IMG/M
3300031778\|Ga0318498_10333816	Not Available	678	Open in IMG/M
3300031781\|Ga0318547_10664696	Not Available	647	Open in IMG/M
3300031797\|Ga0318550_10132785	Not Available	1190	Open in IMG/M
3300031894\|Ga0318522_10206754	Not Available	743	Open in IMG/M
3300031941\|Ga0310912_10805272	Not Available	725	Open in IMG/M
3300031981\|Ga0318531_10179078	Not Available	953	Open in IMG/M
3300032009\|Ga0318563_10258821	Not Available	940	Open in IMG/M
3300032009\|Ga0318563_10270493	Not Available	918	Open in IMG/M
3300032035\|Ga0310911_10898909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300032035\|Ga0310911_10932377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300032060\|Ga0318505_10596060	Not Available	519	Open in IMG/M
3300032064\|Ga0318510_10234091	Not Available	751	Open in IMG/M
3300032067\|Ga0318524_10674111	Not Available	545	Open in IMG/M
3300032068\|Ga0318553_10410534	Not Available	709	Open in IMG/M
3300032076\|Ga0306924_10048396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4684	Open in IMG/M
3300032090\|Ga0318518_10394521	Not Available	710	Open in IMG/M
3300032180\|Ga0307471_102694636	Not Available	630	Open in IMG/M
3300032805\|Ga0335078_12059920	Not Available	608	Open in IMG/M
3300032829\|Ga0335070_10306819	Not Available	1537	Open in IMG/M
3300033134\|Ga0335073_11852748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	560	Open in IMG/M
3300033158\|Ga0335077_11280901	Not Available	713	Open in IMG/M
3300033289\|Ga0310914_11391079	Not Available	604	Open in IMG/M
3300033289\|Ga0310914_11896589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300033290\|Ga0318519_10376046	Not Available	843	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.16%
Host-Associated	Host-Associated	7.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.37%
Aquatic	Environmental → Aquatic	10.78%
Plants	Host-Associated → Plants	7.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.43%
Freshwater	Environmental → Aquatic → Freshwater	10.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.86%
Peat	Environmental → Terrestrial → Peat	2.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.80%
Loam	Environmental → Terrestrial → Soil → Loam	6.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	42.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.27%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.98%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_02278410	2199352024	Soil	SGLLQELAAEVAGWPDAPSQAETAAMLEPVGRNFIPDRYR
JGI12269J14319_101429912	3300001356	Peatlands Soil	LLQELAAEVAGWPDAPSAADAAAMLRPAGNEPGNEPGNEPGNEQGENFIPAGYR*
Ga0062389_1014402252	3300004092	Bog Forest Soil	RADRAGDRLLRELADEVASRPDAPTDADAAAMLAPVGEAFIPAGYR*
Ga0066676_110331731	3300005186	Soil	RVGSGLLQDLAAEVAGWPDAPSEAEIAAMFRPVGRNFIPDRYR*
Ga0070660_1003626492	3300005339	Corn Rhizosphere	AGLLQDLAAEVAGWPDAPSQAETAAMLEPVGRNFIPDRYR*
Ga0070709_102857152	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SGLLQELAAEVASWPDAPSPAETAAMLEPVGRNFIPDRYR*
Ga0070733_109836871	3300005541	Surface Soil	SLLQELAREVASWPDAPDEADAAAMLRPVGQNFIPAGYR*
Ga0070696_1002235891	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GSSLLQELAAEVVGWPDAPSEAETAAMLRPVGRNFIPDRYR*
Ga0070664_1016856961	3300005564	Corn Rhizosphere	LAGLAAEVAGWPDAPSEAETEAMLRPVSRNFIPNGYR*
Ga0066702_108073202	3300005575	Soil	LLQELAAEVASWPDAPSEAEIAAMLRPVGRNFIPDRYR*
Ga0070762_112490941	3300005602	Soil	SGHALLAELALEVAGWPDAPSAADATAMLAPVGESFIPAGYR*
Ga0079220_115251091	3300006806	Agricultural Soil	RADTALLQELAAEVAGWPDTPSEAEIGVMLRPVGRSFVPGRYR*
Ga0066793_105933121	3300009029	Prmafrost Soil	LQELAVEVTGWPDAPSATDAAAMLTPVAANFIPAGYR*
Ga0105243_102841931	3300009148	Miscanthus Rhizosphere	DSGLLQELAAEVASWPDAPSPAETAAMLEPVGRNFIPDRYR*
Ga0075423_106585862	3300009162	Populus Rhizosphere	LRELAAEVASWPDAPSQAETAAMLGPVGRNFIPDRYR*
Ga0116224_103792831	3300009683	Peatlands Soil	LAAEVAGWPDAPSAADAAAMLRPAGNEPGNEPGNEPGNEQGENFIPAGYR*
Ga0116216_100773474	3300009698	Peatlands Soil	RHDRVRPGLLQELAAEVAGWPDAPSDADAAAMLQPVGPNFIPARYR*
Ga0126318_105711981	3300010152	Soil	QELAAEVASWPDAPSPAETAAMLEPAGRNFIPDRYR*
Ga0134111_105675311	3300010329	Grasslands Soil	RADSGLLQELAADVAGWPDAPSQAETAAMLEPVGRNFIPDRYR*
Ga0126381_1050385362	3300010376	Tropical Forest Soil	ELAAEVAAWPDAPSEAEIAAMLRPVGRNFVPDRYR*
Ga0126347_15798422	3300010867	Boreal Forest Soil	GDGLLATLAPEVASWPDAPTPAEVGAMLRPVSRNFIPNEYADEPA*
Ga0126361_108514192	3300010876	Boreal Forest Soil	RDDRAGTALLQELAIEVAGWPDAPSAADADAMLKPVATNFIPAGYR*
Ga0126350_107006001	3300010880	Boreal Forest Soil	LQELALEVAGWPDAPSAADADAMLKPVAANFIPAGYR*
Ga0126350_116734721	3300010880	Boreal Forest Soil	DRLSDALLTELAGEVTSWPDAPSAADASAMLTPVSENFIPAGYR*
Ga0157342_10123971	3300012507	Arabidopsis Rhizosphere	TDSGLLQELAAEVASWPDAPSEAETAAMLEPVGRNFIPDRYR*
Ga0137398_105788461	3300012683	Vadose Zone Soil	LLQELAAEVAGWPDAPSEAETAAMLRPVGRNFIPDRYR*
Ga0164298_103268692	3300012955	Soil	DRAGSGLLQELAAEVASWPDAPSPAETAAMLEPVGRHFIPDRSR*
Ga0134087_106553782	3300012977	Grasslands Soil	TDSGLLQELAAEVAGWPDAPSQAETAAMLEPVGRNLIPDRYR*
Ga0157374_111192011	3300013296	Miscanthus Rhizosphere	RAESGLLQELAAEVASWPDAPSPAETAAMLEPVGRNFIPDRYR*
Ga0182041_122464711	3300016294	Soil	ELAAEVAGWPDAPSEAEIGAMLKPVGRSFVPPGYR
Ga0182040_115642571	3300016387	Soil	ELAAEVASWPDAPSETETAAMLRPVGRNFIPPGYR
Ga0182037_109255921	3300016404	Soil	QVASWPDAPSAADAAAMLAPTGNEQGANFIPAGYQ
Ga0182039_101561483	3300016422	Soil	ADRADCLLLQDLAAEVASWPDAPSAADAAAMLAPTGNEQGGNFIPAGYR
Ga0187812_11618302	3300017821	Freshwater Sediment	VDRVGTGLLQELAAEVAGWPDAPSDADAAAMLRPVGRNFIPAGYQ
Ga0187812_11850322	3300017821	Freshwater Sediment	QELAAEVAGWPDAPSAADAAAMLRPAGGNFIPTGYR
Ga0187818_101926323	3300017823	Freshwater Sediment	CRLLQELAAEVAGWPDAPSAADAAAMLRPAGNEQGGNFIPAGYR
Ga0187806_10400481	3300017928	Freshwater Sediment	GWPDAPSAADAAAMLRPAGNEPGNEPGNEPGNEQGENFIPAGYR
Ga0187808_100634571	3300017942	Freshwater Sediment	DLAADVARWPDAPSAVDVAAMFRPVGENFVPAGYR
Ga0187817_101644272	3300017955	Freshwater Sediment	RLLQELAAEVTGWPDAPSAADAAAMLRPAGNEPGNEPGNEPGNEQGENFIPAGYR
Ga0187779_112027861	3300017959	Tropical Peatland	LLQELAAEVAAWPDAPSAAEAAAMLRPVGRNFVPNEYR
Ga0187782_102518162	3300017975	Tropical Peatland	GQGLLAELAREVASWPDAPSEAEAAAMLRPVGDSFVPAGYR
Ga0187782_108066121	3300017975	Tropical Peatland	DLAAEVASWPDAPSAADVAAMLRPVGENFIPAGYR
Ga0187823_100765811	3300017993	Freshwater Sediment	GLAAEVAGWPDAPSAAETEAMLRPVSRNFIPNGYADEPS
Ga0187890_101132432	3300018044	Peatland	GHPLLTELALEVSGWPDAPSAADAVAMLAPVAENFIPAGYR
Ga0187784_109658112	3300018062	Tropical Peatland	RELAREVAGWPDAPSAADAAAMLRPVGRNFVPAGYR
Ga0187772_106508732	3300018085	Tropical Peatland	EDRAGCGLLQALAAEVAGWPDAPSAAGIAAMLAPAGDERGETFIPAGFR
Ga0210407_114237072	3300020579	Soil	GSALLQELAAEVAGWPDAPSEAEIAGMFRPVGRNFIPDRYR
Ga0210396_109572792	3300021180	Soil	VGDGLLQELAAEVAGWPDAPSDADAAAMLRPVGQNFIPAGYR
Ga0210388_107863312	3300021181	Soil	RVGGRLLQDLAAEVSGWPDAPTDADAAAMLRPVGDSFVPSGYRS
Ga0210393_108964252	3300021401	Soil	AGDRLLQDLAAEVASWPDAPSDADAAAMLHPVGENFVPVRYR
Ga0210410_115209531	3300021479	Soil	ELAAEVASWPDAPSEAEIAAMLRPVGRNFIPPGYR
Ga0247688_10632331	3300024186	Soil	QELAAEVASWPDAPSPAETAAMLEPVGRNFIPDRYR
Ga0179589_101328472	3300024288	Vadose Zone Soil	DRTDSGLLQDLAAEVAGWPDAPSQAETAAMLEPVGRNFIPDRYR
Ga0207684_109628291	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SGLLQELAAEVAGWPDAPSEAEIAAMFRPVGRNFIPGRYR
Ga0207659_114796571	3300025926	Miscanthus Rhizosphere	GLLQELAAEVASWPDAPSPAETAAMLEPVGRNFIPDRYR
Ga0207665_104087502	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	KDSALLQELAAEVASWPDAPTEPDAMLRPVGRNFIPDAYR
Ga0207679_102826861	3300025945	Corn Rhizosphere	RDDRAGSGLLQELAAEVASWPDAPSPAETAAMLEPVGRNFIPDRYR
Ga0208696_10945052	3300027696	Peatlands Soil	QELAAEVAGWPDAPSAADAAAMLRPAGNEPGNEPGNEPGNEQGENFIPAGYR
Ga0209448_100774681	3300027783	Bog Forest Soil	RLLQELAGEVASWPDAPTAADTAAMLRPAGNEPGNEPGNEQRESFIPAGYR
Ga0209380_104019852	3300027889	Soil	ELAAEVAGWPDAPSDADAAAMLRPVGQNFIPAGYR
Ga0302234_103021142	3300028773	Palsa	PLLTELALEVDAWPDAPSAADAVAMLAPVGENFIPAGYR
Ga0302235_103969941	3300028877	Palsa	LLTELALEVAGWPDAPSAADAVAMLAPVGGNFIPAGYR
Ga0302229_100259305	3300028879	Palsa	RVDRAGDALLTELAGEVTGWPDAPSAADACAMLTPVSENFIPAGYR
Ga0308309_107423832	3300028906	Soil	AFLQELAAEVAGWPDAPSEAEIAAMLRPVGRNFIPDRYR
Ga0307495_102385811	3300031199	Soil	DSGLLQELAAEVAGWPDAPSQAETAAMLEPVGRNFIPDRYR
Ga0318516_100697483	3300031543	Soil	GGGLLTELAAEVASWPDAPSGSEVAAMFRPVGGSFVPPGYR
Ga0318541_103517112	3300031545	Soil	GLLTELAAEVASWPDAPSGSEVAAMFRPVGGSFVPPGYR
Ga0318538_103321411	3300031546	Soil	AGGRLLQDLAAEVGSWPDAPSAADAAAMLAPVGETFIPAGYR
Ga0318573_101685921	3300031564	Soil	TGGGLLTELAAEVASWPDAPSGSEVAAMFRPVGGSFVPPGYR
Ga0318515_102433841	3300031572	Soil	LQELAAEVAGWPDAPTDADAAAMLAPAGNGQGENFIPAGYR
Ga0318542_101788132	3300031668	Soil	VQELAAEVTSWPDAPSEAQAAAMLRPVGQNFIPNGYR
Ga0318574_101041491	3300031680	Soil	TELAAEVASWPDAPSGSEVAAMFRPVGGSFVPPGYR
Ga0318572_101204911	3300031681	Soil	GCHLLRDLAAEVAGWPDAPSAADAAAMLAPLGENFIPAGYR
Ga0318560_103392291	3300031682	Soil	LLQDLAAEVASWPDAPSAADAAAMLAPTGYEQGRNFIPAGYR
Ga0318496_100400263	3300031713	Soil	ELAAEVAGWPDAPTDADAAAMLAPAGNGQGENFIPAGYR
Ga0318492_100662121	3300031748	Soil	GGLLTELAAEVASWPDAPSGSEVAAMFRPVGGSFVPPGYR
Ga0318492_102706611	3300031748	Soil	RSSRRADTGLLQELAAEVAGWPDAPSEAEIAAMLRPVGRNFIPDRYR
Ga0318535_100249553	3300031764	Soil	DRTGCLLLQDLAVQVASWPDAPSAADAAAMLAPTGNEQGANFIPAGYQ
Ga0318498_103338161	3300031778	Soil	DDRAGCRLLQNLAAEVAGWPDAPSAADAAAMLAPAGENFIPAGYR
Ga0318547_106646961	3300031781	Soil	RLLQELAAEVAGWPDAPTDADAAAMLAPAGNGQGENFIPAGYR
Ga0318550_101327851	3300031797	Soil	DRTGGGLLTELAAEVASWPDAPSGSEVAAMFRPVGGSFVPPGYR
Ga0318522_102067541	3300031894	Soil	GRGLLTELAAEVAGWPDAPSDSETASMLRPVGANFIPLEYR
Ga0310912_108052722	3300031941	Soil	GCLLLQDLAVQVASWPDAPSAADAAAMLAPTGNEPGNEQGANFIPAGYQ
Ga0318531_101790781	3300031981	Soil	LQDLAVQVASWPDAPSAADAAAMLAPTGNEPGNEQGANFIPAGYQ
Ga0318563_102588211	3300032009	Soil	GTTLLQELAAEVASWPDAPSETETAAMLRPVGRNFIPPGYR
Ga0318563_102704932	3300032009	Soil	DRTGRGLLTELAAEVAGWPDAPSDSETASMLRPVGANFIPLEYR
Ga0310911_108989092	3300032035	Soil	DRAGTTLLQELAAEVASWPDAPSETETAAMLRPVGRNFIPPGYR
Ga0310911_109323771	3300032035	Soil	RAGCRLLRDLAAEVAGWPDAPSAADAAAMLAPIGENFIPAGYR
Ga0318505_105960601	3300032060	Soil	LLTELAAEVAGWPDAPSDSETASMLRPVGANFIPLEYR
Ga0318510_102340912	3300032064	Soil	LQELAAEVAGWPDAPSEAEIAAMLRPVGRNFIPDRYR
Ga0318524_106741111	3300032067	Soil	TELAAEVASWPDAPSEEDIAAMLQPVGENFIPHGYR
Ga0318553_104105342	3300032068	Soil	AHRLLQELAAEVAGWPDAPTDADAAAMLAPAGNGQGENFIPAGYR
Ga0306924_100483966	3300032076	Soil	WPDAPSAADAAAMLAPTGNEPGNEQGANFIPAGYQ
Ga0318518_103945212	3300032090	Soil	LRDLAAEVAGWPDAPSAADAAAMLAPLGENFIPAGYR
Ga0307471_1026946362	3300032180	Hardwood Forest Soil	RDDRTDSGLLQELAAEVASWPDAPSQAETAAMLEPVGRNFIPDRYR
Ga0335078_120599202	3300032805	Soil	GSRLLQDLAAEVASWPDAPTDADAAAMLQRVGENFIPAGYR
Ga0335070_103068191	3300032829	Soil	TALLRELAAEVASWPDTPSEAETEAMLRPVGRNFIPDRYR
Ga0335073_118527481	3300033134	Soil	LLQELAAEVASWPDAPSPAETAAMLEPVGRNFIPDRYR
Ga0335077_112809011	3300033158	Soil	LQELAAEVAGWPDAPSEAEIGAMLRPVGRSFVPPGYR
Ga0310914_113910792	3300033289	Soil	ADRTGGGLLTELAAEVASWPDAPSGSEVAAMFRPVGGSFVPPGYR
Ga0310914_118965892	3300033289	Soil	DTALLQELAAEVAGWPDTPSEAEIGAMLRPVGRSFVPPGYR
Ga0318519_103760462	3300033290	Soil	RVPRGPTLLQELAAEVAGWPDAPSEAEIGAMLKPVGRSFVPPGYR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100640

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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