Metagenome Family F100624

Basic Information
Family ID	F100624
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	75 residues
Representative Sequence	MTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTGTDSD
Number of Associated Samples	64
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.25 %
% of genes near scaffold ends (potentially truncated)	26.47 %
% of genes from short scaffolds (< 2000 bps)	84.31 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (67.647 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (24.510 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.098 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.61% β-sheet: 12.87% Coil/Unstructured: 48.51%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00072	Response_reg	32.35
PF01197	Ribosomal_L31	19.61
PF03462	PCRF	2.94
PF04679	DNA_ligase_A_C	1.96
PF06305	LapA_dom	0.98
PF13436	Gly-zipper_OmpA	0.98
PF07690	MFS_1	0.98
PF04392	ABC_sub_bind	0.98
PF07746	LigA	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	19.61
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	2.94
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	2.94
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.96
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.98
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.65 %
Unclassified	root	N/A	32.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.65 %
Unclassified	root	N/A	32.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.65 %
Unclassified	root	N/A	32.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.92 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.35 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.92 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10260610	All Organisms → cellular organisms → Bacteria	2227	Open in IMG/M
3300000559\|F14TC_100915234	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1040630	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10045046	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10032837	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300002099\|JGI24808J26613_1012946	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300002099\|JGI24808J26613_1032744	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300003911\|JGI25405J52794_10003882	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300003911\|JGI25405J52794_10008898	Not Available	1885	Open in IMG/M
3300003987\|Ga0055471_10097625	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300004052\|Ga0055490_10119113	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300004268\|Ga0066398_10036316	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005289\|Ga0065704_10137948	Not Available	1549	Open in IMG/M
3300005289\|Ga0065704_10823105	Not Available	517	Open in IMG/M
3300005294\|Ga0065705_10022415	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300005294\|Ga0065705_10550954	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005295\|Ga0065707_11161629	Not Available	502	Open in IMG/M
3300005332\|Ga0066388_100092082	All Organisms → cellular organisms → Bacteria	3459	Open in IMG/M
3300005332\|Ga0066388_102597014	Not Available	922	Open in IMG/M
3300005332\|Ga0066388_102608208	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005332\|Ga0066388_106563799	Not Available	586	Open in IMG/M
3300005713\|Ga0066905_100155938	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300005713\|Ga0066905_100430952	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300005713\|Ga0066905_100460920	Not Available	1047	Open in IMG/M
3300005713\|Ga0066905_101150556	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005713\|Ga0066905_101172213	Not Available	685	Open in IMG/M
3300005764\|Ga0066903_103349412	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300005764\|Ga0066903_104180792	Not Available	773	Open in IMG/M
3300005937\|Ga0081455_10038201	All Organisms → cellular organisms → Bacteria	4252	Open in IMG/M
3300005937\|Ga0081455_10194364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1525	Open in IMG/M
3300005981\|Ga0081538_10003214	All Organisms → cellular organisms → Bacteria	15532	Open in IMG/M
3300005981\|Ga0081538_10186388	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300006844\|Ga0075428_100395778	Not Available	1481	Open in IMG/M
3300006844\|Ga0075428_100714303	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300006845\|Ga0075421_101018115	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300009081\|Ga0105098_10062850	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300009081\|Ga0105098_10182262	Not Available	961	Open in IMG/M
3300009100\|Ga0075418_10054917	Not Available	4263	Open in IMG/M
3300009157\|Ga0105092_10224581	Not Available	1052	Open in IMG/M
3300009157\|Ga0105092_10775109	Not Available	561	Open in IMG/M
3300009168\|Ga0105104_10125497	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300009168\|Ga0105104_10361114	Not Available	804	Open in IMG/M
3300009609\|Ga0105347_1001772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	8938	Open in IMG/M
3300009610\|Ga0105340_1021970	All Organisms → cellular organisms → Bacteria	2485	Open in IMG/M
3300009610\|Ga0105340_1041241	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300009792\|Ga0126374_10083785	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300009807\|Ga0105061_1068611	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300009811\|Ga0105084_1045335	Not Available	773	Open in IMG/M
3300010043\|Ga0126380_10602861	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300010043\|Ga0126380_10825081	Not Available	762	Open in IMG/M
3300010043\|Ga0126380_12259120	Not Available	504	Open in IMG/M
3300010047\|Ga0126382_11012839	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300010047\|Ga0126382_11416923	Not Available	635	Open in IMG/M
3300010047\|Ga0126382_11699774	Not Available	589	Open in IMG/M
3300010359\|Ga0126376_11564961	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300010360\|Ga0126372_10381397	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300010360\|Ga0126372_12950270	Not Available	527	Open in IMG/M
3300010361\|Ga0126378_11037557	Not Available	923	Open in IMG/M
3300010361\|Ga0126378_11372583	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300010362\|Ga0126377_10600126	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300010362\|Ga0126377_13547341	Not Available	505	Open in IMG/M
3300010376\|Ga0126381_100344874	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300010376\|Ga0126381_102043711	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300010376\|Ga0126381_102183377	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300010398\|Ga0126383_10359524	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300010398\|Ga0126383_10789783	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300010398\|Ga0126383_11290750	Not Available	820	Open in IMG/M
3300011405\|Ga0137340_1017420	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300011416\|Ga0137422_1062579	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300012360\|Ga0137375_10285993	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300012922\|Ga0137394_10095282	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2502	Open in IMG/M
3300012930\|Ga0137407_10883491	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300012948\|Ga0126375_10588835	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012948\|Ga0126375_10689935	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300012948\|Ga0126375_11785820	Not Available	536	Open in IMG/M
3300014317\|Ga0075343_1080845	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300014865\|Ga0180078_1063754	Not Available	631	Open in IMG/M
3300015256\|Ga0180073_1041911	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300018054\|Ga0184621_10069386	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1209	Open in IMG/M
3300018068\|Ga0184636_1244338	Not Available	638	Open in IMG/M
3300018072\|Ga0184635_10015125	All Organisms → cellular organisms → Bacteria	2762	Open in IMG/M
3300018073\|Ga0184624_10098971	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300018081\|Ga0184625_10143350	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300021081\|Ga0210379_10383094	Not Available	620	Open in IMG/M
3300021560\|Ga0126371_10449693	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300022694\|Ga0222623_10359622	Not Available	555	Open in IMG/M
3300027513\|Ga0208685_1008310	All Organisms → cellular organisms → Bacteria → Proteobacteria	2616	Open in IMG/M
3300027533\|Ga0208185_1010954	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300027722\|Ga0209819_10021123	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300027722\|Ga0209819_10050938	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300027722\|Ga0209819_10110781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	959	Open in IMG/M
3300027722\|Ga0209819_10279145	Not Available	577	Open in IMG/M
3300027874\|Ga0209465_10180906	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300027909\|Ga0209382_11366187	Not Available	714	Open in IMG/M
3300027909\|Ga0209382_11399555	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300027909\|Ga0209382_11661485	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300028803\|Ga0307281_10378736	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031740\|Ga0307468_100098308	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300032174\|Ga0307470_10790212	Not Available	734	Open in IMG/M
3300034354\|Ga0364943_0002484	All Organisms → cellular organisms → Bacteria	5287	Open in IMG/M
3300034354\|Ga0364943_0120080	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.29%
Host-Associated	Host-Associated	14.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.84%
Aquatic	Environmental → Aquatic	27.45%
Plants	Host-Associated → Plants	14.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.88%
Sediment	Environmental → Aquatic → Sediment	14.71%
Freshwater	Environmental → Aquatic → Freshwater	10.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.88%
Marine	Environmental → Aquatic → Marine	1.96%
Floodplain	Environmental → Terrestrial → Floodplain	1.96%
Roots	Host-Associated → Plants → Roots	1.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.25%
Loam	Environmental → Terrestrial → Soil → Loam	15.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.96%
Sand	Environmental → Terrestrial → Soil → Sand	1.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	9.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	8.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.90%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	3.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.94%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_102606103	3300000550	Soil	MTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLALSKTHSVRLAGPFLVIKGGQSADRTGTDSDSAT*
F14TC_1009152343	3300000559	Soil	EQRLMTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLVLSKTYSVRLAGPFLVIKGGQPADRTGTDSD*
KanNP_Total_noBrdU_T14TCDRAFT_10406301	3300000596	Soil	ISKHVTELRREAVAAIKRFNMIAERLNLYEQYLALSKTYDVQMAGPFLVIKGGQPEDQTGTE*
AF_2010_repII_A1DRAFT_100450463	3300000597	Forest Soil	VIYKPGKAAIAKHLVELRREGIEALHRFSGTAERLNFYKRYLALSKYYDVRLAGPFLLIKGGKPADQTGTEVRDPHHQP*
AF_2010_repII_A001DRAFT_100328373	3300000793	Forest Soil	MTQKPGKAVVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLAL*
JGI24808J26613_10129462	3300002099	Soil	MTHKPGKVAIARHLVELRREGIEALHRFSGTTERLKFYERYLALSKYYDVRLAGPFLVIKGGKPADRTGTE*
JGI24808J26613_10327442	3300002099	Soil	MTHKPGKAAISKHVTELRREAVAAIKRFNMIAERLNXYEQYLALSKTYDVQMAGPFLVIKGGQPEDQTGTE*
JGI25405J52794_100038825	3300003911	Tabebuia Heterophylla Rhizosphere	MAHKPKKATIDKHLVELGRQGIEALNRFNAIAGRLDFYEKYLALSKHYDVRLAGPFLIIKGGKPADPGTE*
JGI25405J52794_100088982	3300003911	Tabebuia Heterophylla Rhizosphere	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSGPAP*
Ga0055471_100976252	3300003987	Natural And Restored Wetlands	MTRKPGKTAVVKHLVELRREAVAALQRFNRIADLLNFYEQYLLLSKTHDVRLAGPFLVVKGGKSAASAGSDSSTTAKACDASR*
Ga0055490_101191132	3300004052	Natural And Restored Wetlands	MNRKPGKAAVVKHLVELRREAVAALQRFNRIADRLNFYQQYLLLSKTHDVRLAGPFIVVKGGKSVASTGRDSSTAVKACDASR*
Ga0066398_100363162	3300004268	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLAP*
Ga0065704_101379481	3300005289	Switchgrass Rhizosphere	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTGTDSDSSP*
Ga0065704_108231051	3300005289	Switchgrass Rhizosphere	MTHKPGKAAIAKHLVELRREGIEALHRFSGTAERLKFYERYLALSKYYDVRLAGPFLVIKGGKPADRTGTD*
Ga0065705_100224152	3300005294	Switchgrass Rhizosphere	MTHKPGQAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTGTDSD*
Ga0065705_105509541	3300005294	Switchgrass Rhizosphere	MTHKPGKAAIAKHLVELRREAIAALKRFNMIADRLNFYEQYLALSKTYNVRLAGPFLVIKGGQSAERTGRE*
Ga0065707_111616291	3300005295	Switchgrass Rhizosphere	MDLLMIHKPGKAAIDKHLVELRREGIEALQRFSGIAGRLGFYEKYLALSQYYDVRLAGPFLVIQGGKPADRTGAE*
Ga0066388_1000920821	3300005332	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVASLKRFNTIAERLNFYERYLTLSKTHSVRLAGPFLVIKGGQPAERTNTESD*
Ga0066388_1025970141	3300005332	Tropical Forest Soil	MTQKPGKAVVAKQLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLAP*
Ga0066388_1026082083	3300005332	Tropical Forest Soil	MTHDSQTRKAEIDKYLLELRREGIEALHRLNGIAGRLDCYEKYLALSNYYDVRLAGPFLLIKGGKPADRKGTE*
Ga0066388_1065637992	3300005332	Tropical Forest Soil	KHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLAP*
Ga0066905_1001559381	3300005713	Tropical Forest Soil	MTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLVLSKTYSVRLAGPFLVIKGGQPADRTGTDSDSAP*
Ga0066905_1004309523	3300005713	Tropical Forest Soil	MTQKPGKTAIAKHLVELRREAVAALKRFNMLAERLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTNTESDLAP*
Ga0066905_1004609201	3300005713	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDS
Ga0066905_1011505561	3300005713	Tropical Forest Soil	IAKHLVELRREGIEALHRFSGTAERLNFYKRYLALSKYYDVRLAGPFLLIKGGKPADQTGTEVRDPHHQP*
Ga0066905_1011722131	3300005713	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDL
Ga0066903_1033494122	3300005764	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDPAP*
Ga0066903_1041807922	3300005764	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLSFYERYLALSKTHNVRLAGPFLVIKGGQPRDRANTDSDLAP*
Ga0081455_100382014	3300005937	Tabebuia Heterophylla Rhizosphere	MTYKPGKKTVVKHLINLRREALAALKHYDAIADRLNFYERYLTLSKTYDVRLAGPFLVVKGGQSGERTRMGAAG*
Ga0081455_101943641	3300005937	Tabebuia Heterophylla Rhizosphere	MTHKPGKQAVVNHLVNLRREALAALKHYDAIADRLNFYERYLALSKTYDVRLAGPFLVVKGGQSGQRTRTGAAG*
Ga0081538_1000321417	3300005981	Tabebuia Heterophylla Rhizosphere	MIHKPGEKAVAEHLTSLRREALAALKHYDAIADRLNFYARYLALSKTYDVRLAGPFLVVKGGQSRERTRVGAVG*
Ga0081538_101863881	3300005981	Tabebuia Heterophylla Rhizosphere	AKHMVNLRREALAALKHYDTIADRLTLYERYLALSKTYDVRLAGPFLVVKGGRSGHQMRMGTAGITEIQIPRGEVE*
Ga0075428_1003957783	3300006844	Populus Rhizosphere	MTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLALSKTHSVRLAGPFLVIKGGQSADRTGTDSD*
Ga0075428_1007143032	3300006844	Populus Rhizosphere	MTHKPGKAAISKHVTELRREAVAAIKRFNMIAERLNLYEQYLALSKTYDVQMAGPFLVIKGGQPEDQTGTE*
Ga0075421_1010181152	3300006845	Populus Rhizosphere	MTRKPGKVALTKHLAELRREAVAALQRFNNIADRLNFYEQYLVLSKTYDVRLAGPFLVVKGGKSATLASNDSDSAPKACDTAN*
Ga0105098_100628503	3300009081	Freshwater Sediment	MTRKPGKTAVAKHLVELRREALAALKRYDTIADRLNFYQRYLTLSKIYDVRLAGPFLVVKGGQSRERTRIDAAS*
Ga0105098_101822621	3300009081	Freshwater Sediment	MTRKPEKTVVAKHLLELRREALAALKHYDTIADRLNFYERYLTLSKTYDVRLVGPFLVVKGGQSGERTRMDVAANQNTIANPMGGQVK*
Ga0075418_100549179	3300009100	Populus Rhizosphere	MTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTGTDSD*
Ga0105092_102245812	3300009157	Freshwater Sediment	MTHKPGKTAVAKHLVNLRREALAALKRYDTIADRLNFYERYLTLSKTYDVRLAGPFLVVKGGQSGERTRVDAAS*
Ga0105092_107751091	3300009157	Freshwater Sediment	MTHKPGKAAVAKHLVELRREAVAALKRFNMIAEQLNFYEDYLALSKKYDVQMAGPFLVIK
Ga0105104_101254972	3300009168	Freshwater Sediment	MTRKPGKAAVAKHLVELRREAVAALKRFNTIADRLNFYQRYLALSKTYNVRLAGPFLVIKGGQPVDRTGTDSD*
Ga0105104_103611141	3300009168	Freshwater Sediment	MTHKPEKAAISKHVTELRREAVAALKRFNMIAERLNLYEHYLALSKTYDVQMAGPFLVTENHRLKGGGFLSV*
Ga0105347_10017723	3300009609	Soil	MTQKPGKAAVAKHLAELRREAVAALQRFNNIADRLNFYEQYLVLSKTYDVRLAGPFFVVKGGKAAASADSDSDSTPKARDAAN*
Ga0105340_10219704	3300009610	Soil	MTHKPGKAAVAKHLVELRREAVASLKRFNMIAERLNFYEDYLALSKKYDVQMAGTFLVIKGGNPDRTGRD*
Ga0105340_10412414	3300009610	Soil	VVIEQKLMIRKPEKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDLTGTE*
Ga0126374_100837854	3300009792	Tropical Forest Soil	VIYKPGKATIAKHLVELRREGIEALHRFSGTAERLNFYKRYLALSKYYDVRLAGPFLLIKGGKPADQTGTEVRDPHHQP*
Ga0105061_10686111	3300009807	Groundwater Sand	PGKAAIAKHLVELRREGIEALHRFSGTAERLKFYERYLALSKYYDVRLAGPFLVIKGGKPADRTGTE*
Ga0105084_10453351	3300009811	Groundwater Sand	VVAEQRLMTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTGTDSDSAP*
Ga0126380_106028611	3300010043	Tropical Forest Soil	MTQKPGHAAVAKHLVELRREAVAALKRFNALADRLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTNTESDLAP*
Ga0126380_108250812	3300010043	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYKRYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDPAP*
Ga0126380_122591201	3300010043	Tropical Forest Soil	GKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDPAP*
Ga0126382_110128392	3300010047	Tropical Forest Soil	VIYKPGKAAIAKHLVELRREGIEALHRFSGTTERLNFYKRYLALSKYYDVRLAGPFLLIKGGKPADQTGTEVRDPHHQP*
Ga0126382_114169232	3300010047	Tropical Forest Soil	VHNQFESGEIAEKRLMTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDPAP*
Ga0126382_116997742	3300010047	Tropical Forest Soil	MTQKPGQAAVAKHLVELRREAVAALKRFNALAERLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTNTESDSAP*
Ga0126370_120653872	3300010358	Tropical Forest Soil	ELRREAVAALKRFNTIAERLSFYERYLALSKTHNVRLAGPFLVIKGGQPTEPTNTDSDPAP*
Ga0126376_115649612	3300010359	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVAALKRFNAIAERLSFYERYLALSKTHNVRLAGPFLVIKGGQPAERTNTDSDLTP*
Ga0126372_103813972	3300010360	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLAP*
Ga0126372_129502701	3300010360	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHSVRLAGPFLVIEGGQPAERTNTESDLAP*
Ga0126378_110375572	3300010361	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQQTERTNTDSNPAP*
Ga0126378_113725831	3300010361	Tropical Forest Soil	ARIMTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLAP*
Ga0126377_106001263	3300010362	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVASLKRFNTIAEQLNFYERYLALSKTHSVRLAGPFLVIKGGQPADRTNTESDLAP*
Ga0126377_135473411	3300010362	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVVALKRGNTIAERLNFYERYLALSKTHSVRLAGPFLVIK
Ga0126381_1003448744	3300010376	Tropical Forest Soil	VIYKPGKAAIAKHLVELRREGIEALHRFSGTAKRLNFYKRYLALSKYYDVRLAGPFLLIKGGKPADQTGTEVRDPHHQP*
Ga0126381_1020437112	3300010376	Tropical Forest Soil	MTQKTGKAVVAKQLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLPP*
Ga0126381_1021833771	3300010376	Tropical Forest Soil	VVERIGGAEFTINSKAGVAEQRLMTQKPGKAAVAKHLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLAP*
Ga0126383_103595241	3300010398	Tropical Forest Soil	REGIEALHRFSGTAERLNFYKRYLALSKYYDVRLAGPFLLIKGGKPADQTGTEVRDPHHQP*
Ga0126383_107897832	3300010398	Tropical Forest Soil	MTQKPGKAVVAKHLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDLAP*
Ga0126383_112907501	3300010398	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGG
Ga0137340_10174203	3300011405	Soil	MTQKPGKAAVAKHLAELRREAVAALQRFNNIADRLNFYEQYLVLSKTYDVRLAGPFFVVKGGKAAASADSDSDSTPKACDAAN*
Ga0137422_10625793	3300011416	Soil	TQKPGKAAVAKHLAELRREAVAALQRFNNIADRLNFYEQYLVLSKTYDVRLAGPFFVVKGGKAAASADSDSDSTPKARDAAN*
Ga0137375_102859933	3300012360	Vadose Zone Soil	MTHKPGKAAIAKHLVELHREGIEALHRFSAIAGRVDFYEKYLVLSKYYDVRLAGPFLVIKGGKPADRTGTEKDHPITNLTGVQ*
Ga0137394_100952823	3300012922	Vadose Zone Soil	MTHKPGKAAVAKHLVELRREAVATSKRFNMIAERLNFYKEYLALSKTYDVQMAGPFLVIEGGQS*
Ga0137407_108834911	3300012930	Vadose Zone Soil	MTHKPGKAAVAKHLVELRREAVAALKRFNMIAGRLNSYERYLALSKTYDVRLSGPFLVIKGGKPTDRTGTE*
Ga0126375_105888352	3300012948	Tropical Forest Soil	VIYKPGKATIAKHLVELRREGIEALHRFGGTAERLNFYKRYLALSKYYDVRLAGPFLLIKGGKPADQTGTEVRDPHHQP*
Ga0126375_106899351	3300012948	Tropical Forest Soil	RLMTQKPGKAAVAKHLVELRREAVAALKRFNAIAERLSFYERYLALSKTHNVRLAGPFLVIKGGQPAERTNTDSDLTP*
Ga0126375_117858202	3300012948	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVASLKRFNTIAERLNFYERYLTLSKTHSVRLAGPFMIIKGGQPAERTNTESD*
Ga0075343_10808451	3300014317	Natural And Restored Wetlands	MTRKPGKTAVVKHLVELRREAVAALQRFNRIADLLNFYDQYLLLSKTHDVRLAGPFLVVKGGKSAASAGSDSSEAAKACDAPR*
Ga0180078_10637542	3300014865	Soil	VVVEQKLMIRKPGKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDLTGTE*
Ga0180073_10419111	3300015256	Soil	AAVAKHLAELRREAVAALQRFNNIADRLNFYEQYLVLSKTYDVRLAGPFFVVKGGKAAASADSDSDSTPKARDAAN*
Ga0184621_100693863	3300018054	Groundwater Sediment	MTHKPGKAAVAKHLVELRREAVAALKRFNMIAGRLNLYEQYLALSKTHDVKLAGPFLVIKGGQLQSE
Ga0184636_12443382	3300018068	Groundwater Sediment	VVVEQKLMIRKPGKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDLTGTE
Ga0184635_100151255	3300018072	Groundwater Sediment	MIRKPGKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDRTGTE
Ga0184624_100989713	3300018073	Groundwater Sediment	MVVEQKLMIRKPGKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDRTGTE
Ga0184625_101433503	3300018081	Groundwater Sediment	VVVEQKLMIRKPGKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDRTGTE
Ga0210379_103830941	3300021081	Groundwater Sediment	MIRKPGKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDLTG
Ga0126371_104496933	3300021560	Tropical Forest Soil	MTQKPGKAAVAKHLVELRREAVAALKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDPVP
Ga0222623_103596221	3300022694	Groundwater Sediment	MTHKPGKAAVAKHLVELRREAVASLKRFNMIAERLNFYEQYLALSKNYNVQMAGPFLVIKGGNPR
Ga0208685_10083103	3300027513	Soil	MTQKPGKAAVAKHLAELRREAVAALQRFNNIADRLNFYEQYLVLSKTYDVRLAGPFFVVKGGKAAASADSDSDSTPKARDAAN
Ga0208185_10109543	3300027533	Soil	MIRKPEKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDLTGTE
Ga0209819_100211234	3300027722	Freshwater Sediment	MTRKPGKKAVAKRLLELRREALAALKRYDSIADRLNFYERYLTLSKTHDVRLAGPFLVVKGGQSRDRTRMDPAPSQPE
Ga0209819_100509382	3300027722	Freshwater Sediment	MTRKPEKTVVAKHLLELRREALAALKHYDTIADRLNFYERYLTLSKTYDVRLVGPFLVVKGGQSGERTRMDVAANQNTIANPMGGQVK
Ga0209819_101107812	3300027722	Freshwater Sediment	MTHKPGKTAVAKHLVNLRREALAALKRYDTIADRLNFYERYLTLSKTYDVRLAGPFLVVKGGQSGERTRVDAAS
Ga0209819_102791451	3300027722	Freshwater Sediment	MTRKPGKTAVAKHLVELRREALAALKRYDTIADRLNFYQRYLTLSKIYDVRLAGPFLVVKGGQSREGTRIDA
Ga0209465_101809061	3300027874	Tropical Forest Soil	MTQKPGKAVVAKQLVELRREAVATLKRFNTIAERLNFYERYLALSKTHNVRLAGPFLVIKGGQPTERTNTDSDPAP
Ga0209382_113661872	3300027909	Populus Rhizosphere	MTHKPGQAAVAKHLVELRREAVAALKRFNTLAERLNFYDRYLALSKTHSVRLAGPFLVIKGGQPADRTGTDSD
Ga0209382_113995552	3300027909	Populus Rhizosphere	MNHKPGKAGIANHLVELRREGIEALHRFSGTAERLKFYERYLALSKYYDVRLSGPFLVIKGGKPADRTGTE
Ga0209382_116614852	3300027909	Populus Rhizosphere	MTRKPGKVALTKHLAELRREAVAALQRFNNIADRLNFYEQYLVLSKTYDVRLAGPFLVVKGGKSATLASNDSDSAPKACDTAN
Ga0307281_103787362	3300028803	Soil	PGKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLTLSKTYDVQMAGPFLVIKGEKPTDRTGTE
Ga0307468_1000983082	3300031740	Hardwood Forest Soil	MTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLVLSKTYSVRLAGPFLVIKGGQPADRTGTDSDSAP
Ga0307470_107902121	3300032174	Hardwood Forest Soil	MTHKPGKAAVAKHLVELRREAVAALKRFNTLAERLNFYERYLALSKTHSVRLAGPFLVIKGGQP
Ga0364943_0002484_4887_5123	3300034354	Sediment	VVIEQKLMIRKPEKAAVAKHLVELRREAVAALKRFNMIAERLNFYEQYLALSKTYDVQMAGPFLVIKGEKPTDRTGTE
Ga0364943_0120080_736_930	3300034354	Sediment	MTHKPGKAAVAKHLVELRREAVASLKRFNMIAERLNFYEDYLALSKKYDVQMAGPFLVIKGGQPQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100624

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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