Metagenome / Metatranscriptome Family F099925

Basic Information
Family ID	F099925
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	45 residues
Representative Sequence	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDYAGL
Number of Associated Samples	99
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.65 %
% of genes near scaffold ends (potentially truncated)	81.55 %
% of genes from short scaffolds (< 2000 bps)	78.64 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Most Common Taxonomy
Group	Bacteria (82.524 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.447 % of family members)
Environment Ontology (ENVO)	Unclassified (29.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.223 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.50% β-sheet: 16.67% Coil/Unstructured: 70.83%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00078	RVT_1	29.13
PF08388	GIIM	6.80
PF01842	ACT	1.94
PF13510	Fer2_4	0.97
PF00106	adh_short	0.97
PF01548	DEDD_Tnp_IS110	0.97
PF00196	GerE	0.97
PF00724	Oxidored_FMN	0.97
PF13426	PAS_9	0.97
PF01740	STAS	0.97
PF13521	AAA_28	0.97
PF01380	SIS	0.97
PF00069	Pkinase	0.97
PF00589	Phage_integrase	0.97
PF03994	DUF350	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.88
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.97
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.97
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.52 %
Unclassified	root	N/A	17.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.52 %
Unclassified	root	N/A	17.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.52 %
Unclassified	root	N/A	17.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.01 %
Unclassified	root	N/A	17.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.77 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.27 %
Unclassified	root	N/A	17.48 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.27 %
Unclassified	root	N/A	17.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.27 %
Unclassified	root	N/A	17.48 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.27 %
Unclassified	root	N/A	17.48 %
Deltaproteobacteria bacterium RBG_13_52_11b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	3.88 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.97 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.97 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.27 %
Unclassified	root	N/A	17.48 %
Deltaproteobacteria bacterium RBG_13_52_11b	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	3.88 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.97 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	0.97 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02JMY9T	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1001130	All Organisms → cellular organisms → Bacteria	3968	Open in IMG/M
3300002347\|JGIcombinedJ26865_1039319	All Organisms → cellular organisms → Bacteria → Acidobacteria	752	Open in IMG/M
3300002914\|JGI25617J43924_10107921	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300004080\|Ga0062385_10674690	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300004114\|Ga0062593_100150276	Not Available	1765	Open in IMG/M
3300004635\|Ga0062388_101595411	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005181\|Ga0066678_10163290	Not Available	1401	Open in IMG/M
3300005435\|Ga0070714_100909497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300005445\|Ga0070708_100128931	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	2340	Open in IMG/M
3300005542\|Ga0070732_10296440	Not Available	971	Open in IMG/M
3300005563\|Ga0068855_101448037	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005591\|Ga0070761_10053147	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	2281	Open in IMG/M
3300005610\|Ga0070763_10017188	All Organisms → cellular organisms → Bacteria	3123	Open in IMG/M
3300005995\|Ga0066790_10518542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300006047\|Ga0075024_100187821	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300006163\|Ga0070715_10307427	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300006176\|Ga0070765_100040893	All Organisms → cellular organisms → Bacteria	3711	Open in IMG/M
3300006176\|Ga0070765_100329393	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300006871\|Ga0075434_101100718	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300006893\|Ga0073928_11014810	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300009029\|Ga0066793_10415015	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300009137\|Ga0066709_104458332	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300009147\|Ga0114129_11246761	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300009518\|Ga0116128_1041205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1487	Open in IMG/M
3300009631\|Ga0116115_1159979	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009698\|Ga0116216_10818779	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300009700\|Ga0116217_10498891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	765	Open in IMG/M
3300010048\|Ga0126373_10734857	Not Available	1047	Open in IMG/M
3300010361\|Ga0126378_12487381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300010366\|Ga0126379_10977729	Not Available	951	Open in IMG/M
3300010376\|Ga0126381_104898462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300010379\|Ga0136449_103345398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300010398\|Ga0126383_12571470	Not Available	593	Open in IMG/M
3300010398\|Ga0126383_13062483	Not Available	546	Open in IMG/M
3300010859\|Ga0126352_1195869	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300011269\|Ga0137392_11231140	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300011270\|Ga0137391_10566752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300012132\|Ga0153978_1032647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300012189\|Ga0137388_10409300	Not Available	1256	Open in IMG/M
3300012207\|Ga0137381_11299582	Not Available	620	Open in IMG/M
3300012208\|Ga0137376_10105942	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300012354\|Ga0137366_10058158	All Organisms → cellular organisms → Bacteria	2955	Open in IMG/M
3300012922\|Ga0137394_11471102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012957\|Ga0164303_10470331	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300014155\|Ga0181524_10120444	All Organisms → cellular organisms → Bacteria → Acidobacteria	1418	Open in IMG/M
3300014157\|Ga0134078_10222467	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300014489\|Ga0182018_10458574	Not Available	677	Open in IMG/M
3300014491\|Ga0182014_10150881	Not Available	1311	Open in IMG/M
3300016319\|Ga0182033_10799759	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300016404\|Ga0182037_11268463	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300016404\|Ga0182037_11881436	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300016422\|Ga0182039_11138213	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300017932\|Ga0187814_10297128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300017933\|Ga0187801_10392972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300017943\|Ga0187819_10312668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300018062\|Ga0187784_10786390	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300019866\|Ga0193756_1035998	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300019888\|Ga0193751_1126137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300020006\|Ga0193735_1029523	Not Available	1679	Open in IMG/M
3300020580\|Ga0210403_10992751	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300020582\|Ga0210395_10020685	Not Available	4842	Open in IMG/M
3300021088\|Ga0210404_10035253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2270	Open in IMG/M
3300021168\|Ga0210406_10013624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7812	Open in IMG/M
3300021170\|Ga0210400_10032001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4084	Open in IMG/M
3300021171\|Ga0210405_10000399	All Organisms → cellular organisms → Bacteria → Acidobacteria	59652	Open in IMG/M
3300021401\|Ga0210393_10011771	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6813	Open in IMG/M
3300021559\|Ga0210409_10041478	All Organisms → cellular organisms → Bacteria	4366	Open in IMG/M
3300022531\|Ga0242660_1002881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2400	Open in IMG/M
3300023090\|Ga0224558_1018242	All Organisms → cellular organisms → Bacteria	3693	Open in IMG/M
3300025453\|Ga0208455_1009500	All Organisms → cellular organisms → Bacteria	2471	Open in IMG/M
3300026481\|Ga0257155_1000920	All Organisms → cellular organisms → Bacteria	3032	Open in IMG/M
3300026869\|Ga0207821_1022578	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300027090\|Ga0208604_1001077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2672	Open in IMG/M
3300027174\|Ga0207948_1018488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300027575\|Ga0209525_1001117	All Organisms → cellular organisms → Bacteria → Proteobacteria	5904	Open in IMG/M
3300027583\|Ga0209527_1017922	Not Available	1551	Open in IMG/M
3300027610\|Ga0209528_1010615	All Organisms → cellular organisms → Bacteria → Acidobacteria	1992	Open in IMG/M
3300027651\|Ga0209217_1071589	Not Available	1017	Open in IMG/M
3300027853\|Ga0209274_10371986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	737	Open in IMG/M
3300027855\|Ga0209693_10376109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	688	Open in IMG/M
3300027895\|Ga0209624_10109713	Not Available	1806	Open in IMG/M
3300028021\|Ga0265352_1011837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300028792\|Ga0307504_10479496	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300030972\|Ga0075400_11840895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_52_11b	562	Open in IMG/M
3300031122\|Ga0170822_17139903	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300031344\|Ga0265316_11234569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300031525\|Ga0302326_12772586	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031546\|Ga0318538_10237984	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300031719\|Ga0306917_11321345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300031724\|Ga0318500_10148571	Not Available	1101	Open in IMG/M
3300031736\|Ga0318501_10623695	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300031780\|Ga0318508_1121052	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031820\|Ga0307473_10212596	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300031941\|Ga0310912_10914346	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031946\|Ga0310910_10029246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3725	Open in IMG/M
3300031954\|Ga0306926_12191643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300032001\|Ga0306922_12283215	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032039\|Ga0318559_10375245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300032180\|Ga0307471_102931602	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300032180\|Ga0307471_104152274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300033289\|Ga0310914_10730910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.15%
Host-Associated	Host-Associated	4.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.47%
Aquatic	Environmental → Aquatic	10.68%
Plants	Host-Associated → Plants	3.88%
Fungi	Host-Associated → Fungi	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.52%
Freshwater	Environmental → Aquatic → Freshwater	8.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.91%
Peat	Environmental → Terrestrial → Peat	1.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.97%
Sediment	Environmental → Aquatic → Sediment	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%
Mycelium	Host-Associated → Fungi → Mycelium	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.19%
Loam	Environmental → Terrestrial → Soil → Loam	16.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.97%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.97%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.97%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.97%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.97%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012132	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA062 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300026481	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-A	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028021	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE5	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030972	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_00000800	2170459005	Grass Soil	MYMRAVRLLPSPAVLPQCFAAGISEVSRFSCMKFLGVSGVYDYAGLP
AP72_2010_repI_A100DRAFT_10011307	3300000837	Forest Soil	KPSPAALLSGWTAGVSEVSRFSCMKFLGVSGVFDYAGLSRSSR*
JGIcombinedJ26865_10393191	3300002347	Arctic Peat Soil	AVWPEPSPADLPLGWAVGVSEVSRFSCMKFLGVPGVFDYAGLDRSSR*
JGI25617J43924_101079212	3300002914	Grasslands Soil	MRAVRLLPSPAVLLPGFAAGVSEVSRFSCMKFLGVPGVFDYAGLSSNSR*
Ga0062385_106746902	3300004080	Bog Forest Soil	MRAVRPKPFPADLLPGLTAGVREVSRFSCMKFLGVPGVFDY
Ga0062593_1001502761	3300004114	Soil	MRAVRPKPSPAGLRPGWAAGVSEVSRFSCLKLLGVSGVFDYAGLSGNSRYRSR
Ga0062388_1015954111	3300004635	Bog Forest Soil	MYMRAVRPKPFPADLLPGLTAGVREVSRFSCMKFLGVPGVFDY
Ga0066678_101632901	3300005181	Soil	MRAVRPKPSPADLPHGCAAGVSEVSRFSCMKFLGVSGVFDY
Ga0070714_1009094972	3300005435	Agricultural Soil	MRAVWPKPSPAVLRLTFAVGISEVSRFSCMKFLGVPGVFDYAGLIGDSR*
Ga0070708_1001289312	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AVRPEPSPADLLSVGTAGVFEVSRFSCMKFLGVSGFFDYAGLSKDSR*
Ga0070732_102964401	3300005542	Surface Soil	MRAVRPKPSPADLLPDWAAGVSEVSRFSCMKSLGVPGVFDYAGLNKDSRYR
Ga0068855_1014480372	3300005563	Corn Rhizosphere	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDYA
Ga0070761_100531471	3300005591	Soil	MRAVRPEPSPAVLRTTFFAGFSEVSRFSCMKFLGVSGVFDYAG
Ga0070763_100171881	3300005610	Soil	MRAGRLLPSPAVLLPGFAAGVSEVSRFSCMKLLGASGVFDYAGLTRNSR*
Ga0066790_105185421	3300005995	Soil	KPSPAVLRLTFAAGVCEVSRFSCMKFLGVSGVFDYAGLNRNSR*
Ga0075024_1001878212	3300006047	Watersheds	MRAVRPKPSPADLRPGWAAGVSEVSRFSCLKLLGVSGVFDYAGLSGNSR*
Ga0070715_103074272	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDYAGLN
Ga0070765_1000408937	3300006176	Soil	RLLPSPAVLLPGFAADVSEVSRFSCMKLLGASGVFDYTGLNRNSR*
Ga0070765_1003293932	3300006176	Soil	MRAGRLLPSPAVLLPGFAAGVSEVSRFSCMKLLGASGVFDYAG
Ga0075434_1011007181	3300006871	Populus Rhizosphere	MRAVRPWPSPTVLLQYFAAGASEVSRFSCMKFLGVSGVFD
Ga0073928_110148101	3300006893	Iron-Sulfur Acid Spring	MRAVWLLPSPAGLLPGLTAGVREVSRFSCMKFLGVSGVFDYAGLNK
Ga0066793_104150152	3300009029	Prmafrost Soil	MRAVRPGPSPADLLPDWVAGVSEVSRFSCMKFLGVPGVFDYAGLNK
Ga0066709_1044583322	3300009137	Grasslands Soil	MRAVRPKPSPADLPHGCAAGVSEVSRFSCMKFLGVSGVFDYAGL
Ga0114129_112467613	3300009147	Populus Rhizosphere	MRAVRPEPSPAVLRLIFAAGIPEVSRFSCMKFLGVSGVFDYAGLNR
Ga0116128_10412052	3300009518	Peatland	MRAVRLLPSPTALLLGLAAGVSEVSRFSCMKLLGVSGVFDYAGLNRNSR*
Ga0116115_11599791	3300009631	Peatland	MRAVWLSPSPAGLPSTFPAGVPEVSRFSCTKLPGVSGVYDYA
Ga0116216_108187791	3300009698	Peatlands Soil	VWPKPSPADLLTNWTTGVSEVSRFSCMKFLGVSGVFDY
Ga0116217_104988911	3300009700	Peatlands Soil	MRAVWPEPSPAVLLLTFAAGISEVSRFSCMKFLGVPGVFDYA
Ga0126373_107348571	3300010048	Tropical Forest Soil	MPSPTDLLSGLAAGAAEVSRFSCMKFLGVFGVFDYAGLGSG
Ga0126378_124873812	3300010361	Tropical Forest Soil	WTVRLLPSPTDLLCGLPAGASEVSRFSCMKFLGVSGVFDYAGLGSDSR*
Ga0126379_109777291	3300010366	Tropical Forest Soil	RAVRTKPSPADLLPGWTAGVSEVSRFSCMKFLGVSGVFDYAGPGRNSR*
Ga0126381_1048984621	3300010376	Tropical Forest Soil	MPSPAVLQLTLTAGISEVSRFSCMKFLGVSGVFDYAGLNRNSR
Ga0136449_1033453981	3300010379	Peatlands Soil	MRAVWPEPSPADLLPGSTAGVSEVSRFSCMKFLGVPGVFDY
Ga0126383_125714701	3300010398	Tropical Forest Soil	MRAVRLLPSPTDLPSGLTAGAFEVSRFSCMKFLGVPGVFDYA
Ga0126383_130624831	3300010398	Tropical Forest Soil	RPKPSPAVLQLTLTAGISEVSRFSCMKFLGVPGVYDYAGLNRNSR*
Ga0126352_11958691	3300010859	Boreal Forest Soil	MRAVWPKPSLAVLLPGWAAGVSEVSRFSCMKFLGVPGVFDYAGLS
Ga0137392_112311401	3300011269	Vadose Zone Soil	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGV
Ga0137391_105667522	3300011270	Vadose Zone Soil	MRAVRPEPSPADLPPRLAAGVSEVSRFSCMKFLGVPWVFDYAGLSRNSR
Ga0153978_10326472	3300012132	Attine Ant Fungus Gardens	MRAVRLLPSPTALLPGFAAGVSEVSRFSCMKFLGVPGVFDYAGLNKNSR*
Ga0137388_104093001	3300012189	Vadose Zone Soil	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPG
Ga0137381_112995821	3300012207	Vadose Zone Soil	MRAVWPEPSPAALRLIFVAGISDVAQFSCKKCLGGPG
Ga0137376_101059421	3300012208	Vadose Zone Soil	MRAVWPEPSPAGLRLTFSAGTSEVSRFSCMKFLGVSGVFDYAGLSR
Ga0137366_100581581	3300012354	Vadose Zone Soil	MRAVRPGPSPADLLPDWAAGASEVSRFSCMKFLGVSGVFDY
Ga0137394_114711021	3300012922	Vadose Zone Soil	MRAVWPEPSPAGLRLTVSAGITEVSRFSCMKFLGVPGIFDYAGL
Ga0164303_104703312	3300012957	Soil	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDYAGL
Ga0181524_101204441	3300014155	Bog	MRAVWLLPSPAGLLPGWTAGVSEVSRFSCMKFLGVPGVFDYAGL
Ga0134078_102224673	3300014157	Grasslands Soil	MRAVWPEPFPADLPHGYAAGVSEVSRFSCMKLLGVPGVFDYAGLYKDSRYR
Ga0182018_104585742	3300014489	Palsa	YVWAVRPKPSPPALRPGWTAGAPEVSRFSCMKFIGVSRVFDYAGLDRNSR*
Ga0182014_101508812	3300014491	Bog	MRAVWPKPSPADLLPGWAASVPEVSRFSCLKFLGVPGVFDYAGLN
Ga0182033_107997591	3300016319	Soil	MYTRAVRLPPSPAVLPQCFAAGTSEVSRFSCMKFLGVSGVYDYAGLPGGSRYRPQS
Ga0182037_112684631	3300016404	Soil	VRAVRPQPSPTDLLSGWTAGVSEVSRFSCMKFLGVSGVFDYAGL
Ga0182037_118814361	3300016404	Soil	MRAVRPEPSPADLRPGLTAGVFEVSRFSCMKFLGVPGVFDYAG
Ga0182039_111382131	3300016422	Soil	MYTRAVRLPPSPAVLPQCFAAGTSEVSRFSCMKFLGVSGVYDYAGLPGGSRYR
Ga0187814_102971281	3300017932	Freshwater Sediment	VRAVWPEPSPADLRLAFAAGIPEVSRFSCMKFLGVPGVFDYAGLSRNSR
Ga0187801_103929721	3300017933	Freshwater Sediment	MRAVWPEPSPAVLRLAFAAGIPEVSRFSCMKFLGVPGVF
Ga0187819_103126681	3300017943	Freshwater Sediment	MRAVWPKPSLAVLPPTVAVGISEVSRFSCMKFLGVSGVFDY
Ga0187784_107863902	3300018062	Tropical Peatland	MRAVRPKPSPADLQSVWTAGVSEVSRFSCMKFLGVPGVFDYAGLNRNSR
Ga0193756_10359982	3300019866	Soil	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDYAGLNKDSRYRPCSC
Ga0193751_11261372	3300019888	Soil	MRAVWPEPSPADLPPRLAAGVFEVSRFSCMKFLGVSGVFDYAGLS
Ga0193735_10295232	3300020006	Soil	MRAVRPGPSPAVLLPDWAAGASEVSRFSCMKFLGVSGVFDY
Ga0210403_109927512	3300020580	Soil	VRAVRPEPSPAVLLLSSAAGTPEVSRFSCRKFLGVSGVFDYAGLS
Ga0210395_100206853	3300020582	Soil	MWAVRLLPSPTVLLPGFAAGVSEVSRFSCMKFLGVPGVFDYAGLSRNSR
Ga0210404_100352535	3300021088	Soil	MRAVWPEPSPADLLPDWATGISEVSRFSRMKFQSVPGVFD
Ga0210406_100136245	3300021168	Soil	MRAVRLLPSPTVPLPGLAAGVSEVSRFSCMKLLGVSGVFDYAGLCRNSR
Ga0210400_100320011	3300021170	Soil	MRAVWPTPSPAVLRLTFAAGISEVSRFSCMKFLGVPGVFDYAGLIGDSR
Ga0210405_1000039938	3300021171	Soil	MQAVRLLPSPTVLLPGLAAGVSEVSRFSCMKLLGVSGVFDYAGLSGNSR
Ga0210393_100117718	3300021401	Soil	RAAWLLPSPAALPSGLAAGASEVSRFSCMKFLGVPGVFDYAGPNKSSR
Ga0210409_100414785	3300021559	Soil	MWAVRLLPSPTALLPGLAAGVSEVSRFSCMKLLGVPGVFDYAGLNKNSR
Ga0242660_10028813	3300022531	Soil	MQAVRLLPSPTVLLPGLAAGVSEVSRFSCMKLLGVSGVFHYAGLNRNSR
Ga0224558_10182422	3300023090	Soil	MRAVRLLPSPTALLLGLAAGVSEVSRFSCMKLLGVSGVFDYAGLNRNSR
Ga0208455_10095002	3300025453	Peatland	MRAVRLLPSPTALLLGLAAGVSEVSRFSCMKLLGVPGVFDYAGLNRSSR
Ga0257155_10009202	3300026481	Soil	MQAVRLLPSPTVLLPGLAAGVSEVSRFSCMKLLGVSGVFDYAGLSRNSR
Ga0207821_10225781	3300026869	Tropical Forest Soil	MRAVRLSPSPAVLPRCFVAGTFEVSRFSCMKFLGVSGVYDYAGLPGGSRYR
Ga0208604_10010773	3300027090	Forest Soil	MWAVRLLPSPTVLLPGFAAGVSEVSRFSCMKFLGVPGVFDYAGLNKNSR
Ga0207948_10184882	3300027174	Forest Soil	PSPAVLRLTFSAGISEVSRFSCLKFLGVSGVFDYAGLSRDSRYRPYSCCLPR
Ga0209525_10011177	3300027575	Forest Soil	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDYAGLNGDSR
Ga0209527_10179222	3300027583	Forest Soil	MRAVWPEPSPADLLSGWTTGVSEVSRFSCMKFLGVSG
Ga0209528_10106151	3300027610	Forest Soil	MRAVWPEPSPADLLPDWATGVSEVSRFSCMKFLGVPGVFDYAGL
Ga0209217_10715892	3300027651	Forest Soil	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDYAGLNKDS
Ga0209274_103719861	3300027853	Soil	MRAVRPEPSPAVLRTTFFAGFSEVSRFSCMKFLGVSGVFDYAGPNKC
Ga0209693_103761092	3300027855	Soil	MRAVRLLPSPAVLLPGFAADVSEVSRFSCMKLLGA
Ga0209624_101097131	3300027895	Forest Soil	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDY
Ga0265352_10118371	3300028021	Soil	MRAVRLLPSPTALLPGLAAGVSEVSRFSCMKFLGVPGVFDYAGLNKNSR
Ga0307504_104794961	3300028792	Soil	MRAVRPGPSPADLLPDWAAGVSEVSRFSCMKFLGVPGVFDYAGPNKDS
Ga0075400_118408951	3300030972	Soil	MRVVRPWPSPTALLQYFAAGAFEVSRFSCMKFLGVSGV
Ga0170822_171399031	3300031122	Forest Soil	MRAVRLLPSPTALLSGLAAGVSEVSRFSCMKFLGVPGVFDYA
Ga0265316_112345691	3300031344	Rhizosphere	SPAVLRLTFAAGVCEVSRFSCMKFLGVSGVFDYAGLNRNSR
Ga0302326_127725861	3300031525	Palsa	MRAVWLLPSPAGLLPGLTAGVREVSRFSCMKFLGVSGVFDYA
Ga0318538_102379843	3300031546	Soil	VRAVRPEPSPADLLSGWTAGVSEVSRFSCMKFLGVSGVFDYAGLSG
Ga0306917_113213451	3300031719	Soil	PSPTDLLSGWTAGVSEVSRFSCMKFLGVSGVFDYAGLCRNSR
Ga0318500_101485711	3300031724	Soil	MYTRAVRLPPSPAVLPQCFAAGTSEVSRFSCMKFLGVSGVYDYAGLPGG
Ga0318501_106236951	3300031736	Soil	MYTRAVRLPPSPAVLPQCFAAGTSEVSRFSCMKFLGVSGVYD
Ga0318508_11210522	3300031780	Soil	MCARAVWLSPSPAGLLASCPTGIPEVSRFSCMKFLGVSGVFDYAGLTR
Ga0307473_102125962	3300031820	Hardwood Forest Soil	MRAVWLLPSPTDLLPGLTAGVSEVSRFSCMKFLSVPG
Ga0310912_109143461	3300031941	Soil	MRAVRLLPSPAVLQQCFAAGTAEVSRFSCMKFLGVSGVYDYAGL
Ga0310910_100292464	3300031946	Soil	VRAVRPEPSPADLLSGWTAGVSEVSRFSCMKFLGVSGVFDYAGLSGNSR
Ga0306926_121916431	3300031954	Soil	AVWPEPSPTVLPPGWATGVSEVSRFSSMKFLGVSGVFDYAGLNRDSR
Ga0306922_122832152	3300032001	Soil	VRAVRPKPSPAALLSGWTAGVSEVSRFSCMKFLGVSGVFDYAGLK
Ga0318559_103752451	3300032039	Soil	PEPSPADLLSGWTAGVSEVSRFSCMKFLGVSGVFDYAGLSGNSR
Ga0307471_1029316022	3300032180	Hardwood Forest Soil	VRAVRPKPSPAVLLSGWTAGVSEVSRFSCMKFLGVSGVFDYA
Ga0307471_1041522741	3300032180	Hardwood Forest Soil	LPSPTVLLPGLAAGVSEVSRFSCMKLLGVSGVFDYAGLSGNSR
Ga0310914_107309101	3300033289	Soil	RAVWRSPSPAGLPSWFPTGASEVSRFSYMKFLGVSGVFDYAGPIRGSR
Ga0316628_1033719371	3300033513	Soil	MRAVRLSPSPADLPSTFPTGIPEVSRFSCTKLPGVSGVYDYAGLTAGSR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099925

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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