Metagenome Family F099594

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099594
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	67 residues
Representative Sequence	MPSRTLRRGRRPELQANRKIEPSREAQPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVESKAHQR
Number of Associated Samples	64
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.76 %
% of genes near scaffold ends (potentially truncated)	33.01 %
% of genes from short scaffolds (< 2000 bps)	86.41 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (72.816 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (32.039 % of family members)
Environment Ontology (ENVO)	Unclassified (52.427 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.223 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.93% β-sheet: 0.00% Coil/Unstructured: 69.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00550	PP-binding	2.91
PF13545	HTH_Crp_2	1.94
PF00072	Response_reg	1.94
PF00486	Trans_reg_C	1.94
PF01738	DLH	1.94
PF00106	adh_short	0.97
PF13505	OMP_b-brl	0.97
PF00239	Resolvase	0.97
PF07690	MFS_1	0.97
PF00196	GerE	0.97
PF04366	Ysc84	0.97
PF01381	HTH_3	0.97
PF00011	HSP20	0.97
PF13507	GATase_5	0.97
PF02735	Ku	0.97
PF01425	Amidase	0.97
PF13358	DDE_3	0.97
PF02518	HATPase_c	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.97
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.97
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.97
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.97
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
All Organisms	root	All Organisms	27.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
cellular organisms	root	All Organisms → cellular organisms	27.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.85 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	1.94 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.97 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.97 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.97 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.97 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	0.97 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	0.97 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	0.97 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	0.97 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.97 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.97 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.82 %
Inquilinus limosus MP06	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus → Inquilinus limosus MP06	0.97 %
Candidatus Rhodoblastus alkanivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	0.97 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.97 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.97 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103435395	Not Available	728	Open in IMG/M
3300002245\|JGIcombinedJ26739_101025980	Not Available	710	Open in IMG/M
3300004633\|Ga0066395_10468509	Not Available	721	Open in IMG/M
3300005332\|Ga0066388_100200302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2616	Open in IMG/M
3300005332\|Ga0066388_100419786	Not Available	1981	Open in IMG/M
3300005332\|Ga0066388_101035064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1380	Open in IMG/M
3300005332\|Ga0066388_108705487	Not Available	504	Open in IMG/M
3300005440\|Ga0070705_101667769	Not Available	538	Open in IMG/M
3300005467\|Ga0070706_100538293	Not Available	1086	Open in IMG/M
3300005468\|Ga0070707_100372527	Not Available	1387	Open in IMG/M
3300005471\|Ga0070698_100028879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	5757	Open in IMG/M
3300005518\|Ga0070699_100087110	All Organisms → cellular organisms → Bacteria → Proteobacteria	2726	Open in IMG/M
3300005713\|Ga0066905_100151741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1670	Open in IMG/M
3300005713\|Ga0066905_101320923	Not Available	650	Open in IMG/M
3300005713\|Ga0066905_101977684	Not Available	541	Open in IMG/M
3300005764\|Ga0066903_100142393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3415	Open in IMG/M
3300005764\|Ga0066903_100619847	Not Available	1881	Open in IMG/M
3300005764\|Ga0066903_100748353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → Candidatus Rhodoblastus alkanivorans	1735	Open in IMG/M
3300005764\|Ga0066903_101733826	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300005764\|Ga0066903_101967538	Not Available	1122	Open in IMG/M
3300005764\|Ga0066903_102137037	Not Available	1078	Open in IMG/M
3300005764\|Ga0066903_103532276	Not Available	842	Open in IMG/M
3300005764\|Ga0066903_103800862	Not Available	811	Open in IMG/M
3300005764\|Ga0066903_104060449	Not Available	784	Open in IMG/M
3300005764\|Ga0066903_108204889	Not Available	534	Open in IMG/M
3300005764\|Ga0066903_108416488	Not Available	526	Open in IMG/M
3300006046\|Ga0066652_100788466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	908	Open in IMG/M
3300006176\|Ga0070765_100432181	Not Available	1232	Open in IMG/M
3300007255\|Ga0099791_10195712	Not Available	952	Open in IMG/M
3300009038\|Ga0099829_10895313	Not Available	736	Open in IMG/M
3300009792\|Ga0126374_10240172	Not Available	1175	Open in IMG/M
3300009792\|Ga0126374_11690966	Not Available	526	Open in IMG/M
3300010043\|Ga0126380_10144603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1512	Open in IMG/M
3300010043\|Ga0126380_10376792	Not Available	1044	Open in IMG/M
3300010043\|Ga0126380_10747467	Not Available	793	Open in IMG/M
3300010043\|Ga0126380_11923593	Not Available	539	Open in IMG/M
3300010046\|Ga0126384_10061382	Not Available	2635	Open in IMG/M
3300010046\|Ga0126384_10190299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1616	Open in IMG/M
3300010046\|Ga0126384_11092816	Not Available	731	Open in IMG/M
3300010047\|Ga0126382_10203712	Not Available	1410	Open in IMG/M
3300010047\|Ga0126382_10898391	Not Available	766	Open in IMG/M
3300010047\|Ga0126382_11147049	Not Available	692	Open in IMG/M
3300010047\|Ga0126382_11543724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300010048\|Ga0126373_10885568	Not Available	956	Open in IMG/M
3300010358\|Ga0126370_10134448	Not Available	1777	Open in IMG/M
3300010359\|Ga0126376_10213527	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300010360\|Ga0126372_10414595	Not Available	1234	Open in IMG/M
3300010361\|Ga0126378_10980497	Not Available	949	Open in IMG/M
3300010361\|Ga0126378_12907196	Not Available	546	Open in IMG/M
3300010362\|Ga0126377_10307246	Not Available	1566	Open in IMG/M
3300010362\|Ga0126377_11248097	Not Available	814	Open in IMG/M
3300010362\|Ga0126377_11790355	Not Available	689	Open in IMG/M
3300010362\|Ga0126377_13106081	Not Available	536	Open in IMG/M
3300010366\|Ga0126379_10671422	Not Available	1128	Open in IMG/M
3300010366\|Ga0126379_12727513	Not Available	591	Open in IMG/M
3300010376\|Ga0126381_101522998	Not Available	966	Open in IMG/M
3300010398\|Ga0126383_10344520	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300010398\|Ga0126383_11435749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300011269\|Ga0137392_11377317	Not Available	564	Open in IMG/M
3300011270\|Ga0137391_10282009	Not Available	1435	Open in IMG/M
3300011271\|Ga0137393_10376398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1215	Open in IMG/M
3300012096\|Ga0137389_10455400	Not Available	1096	Open in IMG/M
3300012189\|Ga0137388_10092200	All Organisms → cellular organisms → Bacteria → Proteobacteria	2582	Open in IMG/M
3300012189\|Ga0137388_10469088	Not Available	1168	Open in IMG/M
3300012202\|Ga0137363_10223911	Not Available	1519	Open in IMG/M
3300012202\|Ga0137363_11616605	Not Available	540	Open in IMG/M
3300012203\|Ga0137399_11298583	Not Available	612	Open in IMG/M
3300012361\|Ga0137360_10505641	Not Available	1029	Open in IMG/M
3300012362\|Ga0137361_11560627	Not Available	581	Open in IMG/M
3300012683\|Ga0137398_10962711	Not Available	593	Open in IMG/M
3300012685\|Ga0137397_10475868	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300012685\|Ga0137397_10722307	Not Available	740	Open in IMG/M
3300012917\|Ga0137395_10054481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2529	Open in IMG/M
3300012918\|Ga0137396_10677720	Not Available	761	Open in IMG/M
3300012923\|Ga0137359_10584222	Not Available	981	Open in IMG/M
3300012924\|Ga0137413_11340187	Not Available	576	Open in IMG/M
3300012927\|Ga0137416_10826923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	820	Open in IMG/M
3300012927\|Ga0137416_11193311	Not Available	685	Open in IMG/M
3300012944\|Ga0137410_11186954	Not Available	656	Open in IMG/M
3300012948\|Ga0126375_10201229	Not Available	1308	Open in IMG/M
3300012948\|Ga0126375_10980655	Not Available	686	Open in IMG/M
3300012948\|Ga0126375_11277105	Not Available	615	Open in IMG/M
3300012971\|Ga0126369_10076639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2951	Open in IMG/M
3300015242\|Ga0137412_10456618	Not Available	982	Open in IMG/M
3300015242\|Ga0137412_11059425	Not Available	577	Open in IMG/M
3300015264\|Ga0137403_10174949	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300019889\|Ga0193743_1023843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus → Inquilinus limosus MP06	3081	Open in IMG/M
3300019889\|Ga0193743_1120500	Not Available	947	Open in IMG/M
3300020021\|Ga0193726_1008101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5890	Open in IMG/M
3300021404\|Ga0210389_10051419	Not Available	3161	Open in IMG/M
3300021560\|Ga0126371_12042908	Not Available	690	Open in IMG/M
3300025910\|Ga0207684_11652612	Not Available	517	Open in IMG/M
3300025922\|Ga0207646_10139837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2180	Open in IMG/M
3300026446\|Ga0257178_1034121	Not Available	639	Open in IMG/M
3300026551\|Ga0209648_10034987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4370	Open in IMG/M
3300026557\|Ga0179587_10116734	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300026557\|Ga0179587_10165553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1385	Open in IMG/M
3300027018\|Ga0208475_1030059	Not Available	536	Open in IMG/M
3300027846\|Ga0209180_10752321	Not Available	526	Open in IMG/M
3300027903\|Ga0209488_10933224	Not Available	606	Open in IMG/M
3300028828\|Ga0307312_10767512	Not Available	639	Open in IMG/M
3300031231\|Ga0170824_101679542	Not Available	550	Open in IMG/M
3300031469\|Ga0170819_11077090	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.84%
Loam	Environmental → Terrestrial → Soil → Loam	28.16%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	65.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	32.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1034353952	3300000955	Soil	MPSHTLRHRRRPKLQANRKTEPSRESAIAAEQLRALIPYSTDPAWVEKMAREVESKAHQH
JGIcombinedJ26739_1010259802	3300002245	Forest Soil	MPSHTLRRRRSPELQANRKREPSREAAIAAQLRALIPGSTDPAWLEKMAREVESKAHQR*
Ga0066395_104685092	3300004633	Tropical Forest Soil	MPSRTLRRARRSEPQAYHKAKLSGEVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMAREVESKAHLR*
Ga0066388_1002003022	3300005332	Tropical Forest Soil	MRPGTLRPAGRPELQAYHQTERSSEAQPIENEANAAAIAAQLRAQIPCSTDPAWLERMARKVESK*
Ga0066388_1004197861	3300005332	Tropical Forest Soil	MPSRTLRRARRSELQVYHKAKPSREVQPTEKQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0066388_1010350642	3300005332	Tropical Forest Soil	MLPGTLRRSRRPNRQAYRRTERSRDVHPVEDKARAVAIAARLRAMIPCSTDPAWLEKMAREVESKTHHL*
Ga0066388_1087054871	3300005332	Tropical Forest Soil	MPSRILRRAKRPELQAYRRAERSREVQPIENKARAAAIAARLRAMIPSSTDPAWLETMAREVESEAHLRRVLAPSAD*
Ga0070705_1016677691	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRTLRRGRRPELQANRKMEPSREAQPLENKDNAAAISAHLRALLPCSTDPAWLEKMAREVESKAHQR*
Ga0070706_1005382931	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRTLRRGRRPELQANRKMEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQR*
Ga0070707_1003725271	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPSCTLRRGRRPELRANRKTEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKM
Ga0070698_1000288797	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPSCTLRRGRRPELQANRKTEPSREAQPLENKDNAAAISAHLRALIPCSTD
Ga0070699_1000871102	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRTLRRGRRPELQANRKTEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQR*
Ga0066905_1001517413	3300005713	Tropical Forest Soil	MLPGTLRRSRRPNQQAYRRTERSRDVHPVEDKARAVAIAARLRAMIPCSTDPAWLEKMAREVESKTHHL*
Ga0066905_1013209232	3300005713	Tropical Forest Soil	MHSRTLRRARWSELQAYHKAKLSREVQSTDNQTDALAVAARLRAMIPCSTDPAWLEKMAREVESK
Ga0066905_1019776841	3300005713	Tropical Forest Soil	MPSRTLRRARRSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMAREVESKV
Ga0066903_1001423936	3300005764	Tropical Forest Soil	MPSRTLRRARWSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLERMAREVESKAHLR*
Ga0066903_1006198471	3300005764	Tropical Forest Soil	MRPGTLRPARRPELQAYHQTERFSEAQPIENEANAAAIAAQLRAQIPCSTDPAWLERMAREVESK*
Ga0066903_1007483531	3300005764	Tropical Forest Soil	MPSRTLRRARRSELQAYHKAGRSREAQPIENKANAAAIAARLRAQIPCSTDPARLEKMAREVESKAHLR*
Ga0066903_1017338262	3300005764	Tropical Forest Soil	LRRARWSELQAYHKAKLSREVQPIENKAHAAAIAAQLRAQIPCSTDPAWLEKMAREVESKAHLR*
Ga0066903_1019675382	3300005764	Tropical Forest Soil	MPSRTLRRSRPSELPAYRKTELLREVQPIENKAHAAAIAARLRAQIPCSTDPAWLEKMAREVESRAARR*
Ga0066903_1021370371	3300005764	Tropical Forest Soil	MLPGTLRRSRRSEQQAYLKTRPSKEVQPLENQAPAGAIAARLRAMIPCSTDPAWLEKMAREVESRARQR*
Ga0066903_1035322762	3300005764	Tropical Forest Soil	LSELQAYHKAKLSREVQPIENQTDAVAVAARLRAQIPCSTDPAWLETMAREVESKAHLR*
Ga0066903_1038008621	3300005764	Tropical Forest Soil	MPSRTLRRARWSELQAYHKAKLSGEVQSIENQTDAVTVAARLRAMIPCSTDPAWLEKMAREVESKAHLR*
Ga0066903_1040604493	3300005764	Tropical Forest Soil	MPSRILRRAKRPELQAYRRAEQSREVQPIENKARAAAIAARLRAMIPSSTDPAWLETMAREVESEAHLRRVLAPSAD*
Ga0066903_1082048892	3300005764	Tropical Forest Soil	MPSRTLRRTKRPELQAYRRAERSREVQPIENKAHAVAIAARLRAMIPSSTDPAWLE
Ga0066903_1084164881	3300005764	Tropical Forest Soil	MPSRTLRRARWSELQAYHKAKLSREVQQIENQTDAVAVAARLRAMIPCSTDPAWLEKMAREVESKAHLR*
Ga0066652_1007884663	3300006046	Soil	MPSPTLRRGPRPELQANRKIEPSRKAQPLENKDNAAAISAHLRALIPCSTDP
Ga0070765_1004321812	3300006176	Soil	MPSHTLRRRQRPELQADRKREPSRETAIAAQLRALIPASTDPTWLEKMAREVESKARQR*
Ga0099791_101957122	3300007255	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIELSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQR*
Ga0099829_108953131	3300009038	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIEPSREAQPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVESKAHQR*
Ga0126374_102401721	3300009792	Tropical Forest Soil	QLARWRDQENARRIRGESMPSRTLRRARRSELQAYHKAKPSREVQPTEKQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126374_116909661	3300009792	Tropical Forest Soil	RIRGECMPSRTLRRARWSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLERMAREVESKAHLR*
Ga0126380_101446031	3300010043	Tropical Forest Soil	GENMLLGTLRRSGRSEQQAYRRTERSREVQPVEDKARAVAIAARLRAMIPCSTDPAWLEKMAREVENRAHQR*
Ga0126380_103767921	3300010043	Tropical Forest Soil	MPSRTLRRARRSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMAHEVESKAQRS*
Ga0126380_107474671	3300010043	Tropical Forest Soil	TLRRARWSELQAYHKAKLSREVQPLEKQTDAVAVAARLRAMIPCSTDPAWLEKMAREVESKVRPR*
Ga0126380_119235932	3300010043	Tropical Forest Soil	MASRTLRRSRPSELPAYRKTELLREVQPIENKATAAAIAARLRAQIPCSTDPAWLEKMAREVESRAARR*
Ga0126384_100613823	3300010046	Tropical Forest Soil	MPSRILRRSRRSEQQTYRKTEPSRKVQSIENKAHAAAIAAQLRAQIPCSTDPARLEKMAREVERPLGVRSI*
Ga0126384_101902992	3300010046	Tropical Forest Soil	MPSRILRRAKRPELQAYRRAERSREVQPIENKAHAAAIAARLRAMIPSSTDPAWLETMAREVESEAHLRRVLAPSAD*
Ga0126384_110928161	3300010046	Tropical Forest Soil	MPFRTLRRARRSELQAYHKAKPSREVQPTEKQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126382_102037121	3300010047	Tropical Forest Soil	SMPSRTLRRARRSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126382_108983911	3300010047	Tropical Forest Soil	MPSRTLRRARRSELQAYHKAKPSREVPPIENQTDAVAVATRLHAMIPCSTDPAWLEKMARELESKAHQ
Ga0126382_111470492	3300010047	Tropical Forest Soil	MLPGTLRRSGRPAYRRAERSRDVQPVKDKARAVAIAARLRAMIPCSTDPAWLEKMAREVEGRAHHR*
Ga0126382_115437241	3300010047	Tropical Forest Soil	MPSRILRRSRRSEQQGYRKTEPSWQVQSIENKAHAAAIAAQLRAQIPCSTDPVWLEKMAREVEGRAARR*
Ga0126373_108855682	3300010048	Tropical Forest Soil	LRRARWSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLETMAREVESKAHLR*
Ga0126370_101344481	3300010358	Tropical Forest Soil	LSELQAYHKAKLSGEVQSIENQTDAVAVAARLRAQIPCSTDPAWLETMAREVESKAHLR*
Ga0126376_102135274	3300010359	Tropical Forest Soil	LQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126372_104145951	3300010360	Tropical Forest Soil	MPSRTLRRARWSELQAYHKAKLSREVQPIENQTDAVAVAARLRAQIPCSTDPAWLETMAREVESKAHLR*
Ga0126378_109804971	3300010361	Tropical Forest Soil	PGTLRPARRPELQAYHQTERFSEAQPIENEANGAAIAAQLRAQIPCSTDPAWLERMAREVESK*
Ga0126378_129071961	3300010361	Tropical Forest Soil	MPSRTLRRARRSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMAR
Ga0126377_103072461	3300010362	Tropical Forest Soil	MPSRTLRRARRSELQAYHKAKPSREVQPTEKQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126377_112480971	3300010362	Tropical Forest Soil	MHSRTLRHARWSELQAHHKAKLSREVQPIENQTDAVAVVARLRAMIPCSTDPAWLERMAREVESKAHLR*
Ga0126377_117903551	3300010362	Tropical Forest Soil	MPSRTLRRARRSELQAYHKAKPSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126377_131060811	3300010362	Tropical Forest Soil	SMPSRTLRRARRSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMAHEVESKAQRS*
Ga0126379_106714221	3300010366	Tropical Forest Soil	MPSRTLRRARRSELQAYHKAKPSREVPPIENQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126379_127275131	3300010366	Tropical Forest Soil	LARRPRLASCQMSELQAYHKAKLSREVHPIENQTDAVAVAARLRAMIPCSTDPAWPETMAREVESKAHLR*
Ga0126381_1015229982	3300010376	Tropical Forest Soil	MLSRTLRRRRKRELQANRKTEPSCETQSVENQGHAVAIAARLRAMLPWSTDPEWLEKMAREVESRARQR*
Ga0126383_103445203	3300010398	Tropical Forest Soil	PFRTLRRARRSELQAYHKAKPSMEVPPIENQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126383_114357493	3300010398	Tropical Forest Soil	MSELQAYHKAKLSREVHPIENQTDAVAVAARLRVMIPCSTDPAWLEKMAREVEGKAHLR*
Ga0137392_113773171	3300011269	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIEPSREARPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVESKAHQH*
Ga0137391_102820092	3300011270	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIEPSREARPLENKDNAAAISAHLRALIPCSTDPAWLAKMAREVESNAHQR*
Ga0137393_103763982	3300011271	Vadose Zone Soil	ELQANRKIEPSREAQPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVESNAHQR*
Ga0137389_104554002	3300012096	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIEPSREARPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQR*
Ga0137388_100922006	3300012189	Vadose Zone Soil	GNQSREKNMPSRTLRRRRRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLAKMAREVESNAHQR*
Ga0137388_104690883	3300012189	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIEPSREARPLENKDNAAAISARLRALIPCSTDPAWLEKTAREVESKAHQR*
Ga0137363_102239111	3300012202	Vadose Zone Soil	MPSRTLHRGRRPELQANRKIELSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQ
Ga0137363_116166051	3300012202	Vadose Zone Soil	MPSHTLRRRRRPELQANRKTEPSREAAIAAQLRALIPCSTDPAWLEKMACE
Ga0137399_112985832	3300012203	Vadose Zone Soil	MPFHTLRRRRRPELQANRKTEPSREAAIAAQLRALIPCSTDPAWLEKMACEVESKAHQHRMPSYQVSQAAR*
Ga0137360_105056411	3300012361	Vadose Zone Soil	MPSRTLRRGRRPELQTNRKIEPSREARPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVESKAHQR*
Ga0137361_115606272	3300012362	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIEPSREARPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVES
Ga0137398_109627111	3300012683	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQR*
Ga0137397_104758681	3300012685	Vadose Zone Soil	MPSHTLRRRRRPELQANRKTEPSREAAIAAQLRALIPCSTDPAWLEKMACEVESKAHQHRMPSYQVSQAAR*
Ga0137397_107223071	3300012685	Vadose Zone Soil	MPSRTLRRGPRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQH*
Ga0137395_100544814	3300012917	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQH*
Ga0137396_106777201	3300012918	Vadose Zone Soil	MPSRTLRRGPRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPVWLEKMAREVESKAHRR*
Ga0137359_105842222	3300012923	Vadose Zone Soil	GIPSLIDGGNMPSRTLRRGRRPELQANRKIEPSREARPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVESNAHQR*
Ga0137413_113401871	3300012924	Vadose Zone Soil	MPSHTLRRRRRPELQAKRKREPSSEAAIAAQLRALIPCSTDPAWLEKMAREVEGKANQR*
Ga0137416_108269231	3300012927	Vadose Zone Soil	MPSHALRRRRRPELQANRKTEPSREAAIAAQLRALIPCSTDPAWLEKMA
Ga0137416_111933111	3300012927	Vadose Zone Soil	MPSRTLRRDPRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPVWLEKMAREVESKAHQR*
Ga0137410_111869541	3300012944	Vadose Zone Soil	MPSRTLRRGPRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEEMAREVESKAHQR*
Ga0126375_102012292	3300012948	Tropical Forest Soil	MPFRTLRRARRSELQAYHKAKLSREVQPIENQTDAVAVAARLRAMIPCSTDPAWLEKMARELESKAHQS*
Ga0126375_109806551	3300012948	Tropical Forest Soil	RIRGETMASRTLRRSRPSELPAYRKTELLREVQPIENKAHAAAIAARLRAQIPCSTDPAWLEKMAHEVESKAQRS*
Ga0126375_112771051	3300012948	Tropical Forest Soil	MLPGTLRRSRRPDQQAYRRTERSRDVQPVEDKARAVAIAARLRAMIHCSTDPAWLEKMAREVESKAHHR*
Ga0126369_100766396	3300012971	Tropical Forest Soil	LRRARWSELQAYHKAKLSREVQPIENQTDAVAVAARLRAQIPCSTDPAWLETMAREVESKAHLR*
Ga0137412_104566182	3300015242	Vadose Zone Soil	MSSHTLRRRRRPEQQANRKTEPTREAAIAAQLRALIPCSTDPAWLEKMAREVEDKSHQR*
Ga0137412_110594251	3300015242	Vadose Zone Soil	MLARFPEKAGKPVTKRRRNMPSRTLRHLRRPELQASRKTEPSREAAIAAQLRALIPCSTDPAWLEKMAREVEGKANQR*
Ga0137403_101749493	3300015264	Vadose Zone Soil	MPSPTLRRGPRPELQANRKIEPSREAQPLENNDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQR*
Ga0193743_10238435	3300019889	Soil	MPSRTLRHLRRPELQASRKTEPSREAAIAAQLRALIPCSTDPAWLEKMAREVE
Ga0193743_11205003	3300019889	Soil	PGNRASRRRRPELQANRKTERSREAAVAAQLRALIPCSTDPAWLEKMAREVESKAHQR
Ga0193726_10081018	3300020021	Soil	MLSHTLRRRRPELQTNRKTGPSREAAIAAQLRALIPISTDPAWLEKMAREVESKAHQR
Ga0210389_100514192	3300021404	Soil	MPSHTLRRRRSPELQANRKREPSREVAIAAQLRALIPSSTDPVWLEKMAREVESKARQR
Ga0126371_120429082	3300021560	Tropical Forest Soil	MLPGTLRRSRRPDQQAYRRTERFRDAQPVEDKARAVSIAARLRAMIPCSTDPAWL
Ga0207684_116526121	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPSRTLRRGRRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESEAHLR
Ga0207646_101398372	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPSCTLRRGRRPELRANRKTEPSREAQPLENKDNAAAISAHLRALIPCSTDPAWLEKMAREVESKAHQR
Ga0257178_10341212	3300026446	Soil	MPSRTLRRGRRPELQANRKIEPSREARPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVESK
Ga0209648_100349873	3300026551	Grasslands Soil	MPSRTLRRGRRPELQANRKTEPSREAAIAAQLRALIPCSTDPEWLEKMARELESKAHQR
Ga0179587_101167341	3300026557	Vadose Zone Soil	SHALRRRRRPELQANRKTEPSREAAIAAQLRALIPCSTDPAWLEKMAREVESKAHQR
Ga0179587_101655533	3300026557	Vadose Zone Soil	MPSRTLRRGPRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPVWLEKMAREVESKAHRR
Ga0208475_10300591	3300027018	Soil	MLPGTLRRSRRSEQQAYLKTRPSREVQPLENQAHAEAIAARLRAMIPCSTDPAWLEKMAREVLSNPIIEDYRVEIEA
Ga0209180_107523212	3300027846	Vadose Zone Soil	MPSRTLRRGRRPELQANRKIELSREARPLENKDNAAAISARLRALIPCSTDPAWLEKMAREVESKAHQ
Ga0209488_109332241	3300027903	Vadose Zone Soil	MPSRTLRRGPRPELQANRKIEPSREAQPLENKDNAAAISAHLRALIPCSTDPVWLEKMAREVESKAHQR
Ga0307312_107675122	3300028828	Soil	LLSHTLRRRRRPELQANCKTGPSREAAIAAQLRALIPSSTDPAWLEKMAREVESKAHQR
Ga0170824_1016795421	3300031231	Forest Soil	MPSHTLRRRRRPELQAIRKTKTEPSREAAIVAQLRGLIPCSTDPAWLEKMAREVESKAHQ
Ga0170819_110770902	3300031469	Forest Soil	MPSHTLRRRRRPELQANRKREPSREAAIAAQLRALIPSSTDPVWLEKMAREVESKAHQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099594

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences