Metagenome / Metatranscriptome Family F099587

Basic Information
Family ID	F099587
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	96 residues
Representative Sequence	VCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLGGEHWNVLNHLRSGAPPPP
Number of Associated Samples	94
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.71 %
% of genes near scaffold ends (potentially truncated)	85.44 %
% of genes from short scaffolds (< 2000 bps)	93.20 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.893 % of family members)
Environment Ontology (ENVO)	Unclassified (25.243 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.515 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.40% β-sheet: 16.00% Coil/Unstructured: 77.60%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02381	MraZ	85.44
PF01795	Methyltransf_5	5.83
PF02021	UPF0102	1.94
PF04348	LppC	0.97
PF04386	SspB	0.97
PF00696	AA_kinase	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2001	MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity	Translation, ribosomal structure and biogenesis [J]	85.44
COG0275	16S rRNA C1402 N4-methylase RsmH	Translation, ribosomal structure and biogenesis [J]	5.83
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	1.94
COG2969	Stringent starvation protein B, binds SsrA peptide	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG3107	Outer membrane lipoprotein LpoA, binds and activates PBP1a	Cell wall/membrane/envelope biogenesis [M]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	97.09 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.62 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.94 %
Unclassified	root	N/A	1.94 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.97 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium SG8_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_15	1.94 %
Unclassified	root	N/A	1.94 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101885158	All Organisms → cellular organisms → Bacteria → Proteobacteria	1294	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101885651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1254	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101886964	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1034413	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300000955\|JGI1027J12803_100088603	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300000955\|JGI1027J12803_107187684	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300001867\|JGI12627J18819_10121382	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300002190\|metazooDRAFT_1069535	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300004082\|Ga0062384_100324573	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300004091\|Ga0062387_100953323	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300004092\|Ga0062389_103409794	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300004267\|Ga0066396_10008284	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300004479\|Ga0062595_101933159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_15	567	Open in IMG/M
3300005337\|Ga0070682_101961142	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300005355\|Ga0070671_101553297	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300005434\|Ga0070709_10879014	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300005439\|Ga0070711_100789761	All Organisms → cellular organisms → Bacteria → Proteobacteria	804	Open in IMG/M
3300005545\|Ga0070695_100366778	All Organisms → cellular organisms → Bacteria → Proteobacteria	1083	Open in IMG/M
3300005614\|Ga0068856_101630996	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300005764\|Ga0066903_101750224	All Organisms → cellular organisms → Bacteria → Proteobacteria	1185	Open in IMG/M
3300005844\|Ga0068862_100683500	All Organisms → cellular organisms → Bacteria → Proteobacteria	993	Open in IMG/M
3300006050\|Ga0075028_100123862	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300006050\|Ga0075028_100317196	All Organisms → cellular organisms → Bacteria → Proteobacteria	873	Open in IMG/M
3300006162\|Ga0075030_100536090	All Organisms → cellular organisms → Bacteria → Proteobacteria	930	Open in IMG/M
3300006176\|Ga0070765_100602527	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300006903\|Ga0075426_10855595	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300010361\|Ga0126378_13137480	All Organisms → cellular organisms → Bacteria → Proteobacteria	526	Open in IMG/M
3300011120\|Ga0150983_15023853	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300014169\|Ga0181531_10515096	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300015054\|Ga0137420_1433966	Not Available	4913	Open in IMG/M
3300016404\|Ga0182037_11116658	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300016422\|Ga0182039_12029959	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300017970\|Ga0187783_10185285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1532	Open in IMG/M
3300017993\|Ga0187823_10044224	All Organisms → cellular organisms → Bacteria → Proteobacteria	1207	Open in IMG/M
3300017993\|Ga0187823_10273762	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300017994\|Ga0187822_10105027	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300018062\|Ga0187784_11160090	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300019265\|Ga0187792_1008968	All Organisms → cellular organisms → Bacteria → Proteobacteria	674	Open in IMG/M
3300020070\|Ga0206356_11442965	All Organisms → cellular organisms → Bacteria → Proteobacteria	920	Open in IMG/M
3300021086\|Ga0179596_10053221	All Organisms → cellular organisms → Bacteria → Proteobacteria	1689	Open in IMG/M
3300021088\|Ga0210404_10187296	All Organisms → cellular organisms → Bacteria → Proteobacteria	1104	Open in IMG/M
3300021088\|Ga0210404_10594049	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300021168\|Ga0210406_10031553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4783	Open in IMG/M
3300021171\|Ga0210405_10023593	All Organisms → cellular organisms → Bacteria → Proteobacteria	4960	Open in IMG/M
3300021180\|Ga0210396_10164750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1988	Open in IMG/M
3300021180\|Ga0210396_11581001	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300021181\|Ga0210388_11030954	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300021402\|Ga0210385_10469290	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300021403\|Ga0210397_10534990	All Organisms → cellular organisms → Bacteria → Proteobacteria	890	Open in IMG/M
3300021405\|Ga0210387_10510576	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300021405\|Ga0210387_10544150	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300021479\|Ga0210410_10512402	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300021560\|Ga0126371_11259283	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300022525\|Ga0242656_1124892	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300022711\|Ga0242674_1013770	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300022724\|Ga0242665_10095343	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300022726\|Ga0242654_10063101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1082	Open in IMG/M
3300025905\|Ga0207685_10486551	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300025928\|Ga0207700_12028185	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300025931\|Ga0207644_10773911	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300026675\|Ga0208068_100349	All Organisms → cellular organisms → Bacteria → Proteobacteria	850	Open in IMG/M
3300027003\|Ga0207722_1003243	All Organisms → cellular organisms → Bacteria	2048	Open in IMG/M
3300027176\|Ga0208992_1048474	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300027527\|Ga0209684_1025415	All Organisms → cellular organisms → Bacteria → Proteobacteria	908	Open in IMG/M
3300027829\|Ga0209773_10120920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1086	Open in IMG/M
3300027874\|Ga0209465_10528379	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300027884\|Ga0209275_10103593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1460	Open in IMG/M
3300028747\|Ga0302219_10391869	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300028759\|Ga0302224_10424282	All Organisms → cellular organisms → Bacteria → Proteobacteria	541	Open in IMG/M
3300028773\|Ga0302234_10181460	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300028906\|Ga0308309_10441430	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300030503\|Ga0311370_11863030	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300030596\|Ga0210278_1103546	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300030687\|Ga0302309_10396925	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300030741\|Ga0265459_11558366	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300030916\|Ga0075386_11972127	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300030945\|Ga0075373_11528343	All Organisms → cellular organisms → Bacteria → Proteobacteria	1146	Open in IMG/M
3300030967\|Ga0075399_11259752	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300031231\|Ga0170824_126876818	All Organisms → cellular organisms → Bacteria → Proteobacteria	930	Open in IMG/M
3300031446\|Ga0170820_10870149	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300031549\|Ga0318571_10318844	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300031564\|Ga0318573_10113103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1403	Open in IMG/M
3300031572\|Ga0318515_10018486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3258	Open in IMG/M
3300031572\|Ga0318515_10108273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	1462	Open in IMG/M
3300031573\|Ga0310915_10717838	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300031713\|Ga0318496_10795826	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300031753\|Ga0307477_10667830	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300031754\|Ga0307475_10417234	All Organisms → cellular organisms → Bacteria → Proteobacteria	1079	Open in IMG/M
3300031768\|Ga0318509_10419432	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300031781\|Ga0318547_10019079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3343	Open in IMG/M
3300031792\|Ga0318529_10343558	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300031796\|Ga0318576_10547270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_15	546	Open in IMG/M
3300031797\|Ga0318550_10054703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1803	Open in IMG/M
3300031890\|Ga0306925_11355311	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300031897\|Ga0318520_10126699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1459	Open in IMG/M
3300031947\|Ga0310909_11494832	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300032039\|Ga0318559_10608503	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300032054\|Ga0318570_10270688	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300032059\|Ga0318533_10586830	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300032066\|Ga0318514_10356995	All Organisms → cellular organisms → Bacteria → Proteobacteria	774	Open in IMG/M
3300032756\|Ga0315742_10804996	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300032829\|Ga0335070_11674489	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.17%
Host-Associated	Host-Associated	4.85%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.50%
Aquatic	Environmental → Aquatic	10.68%
Plants	Host-Associated → Plants	4.85%
Solid Waste	Engineered → Solid Waste	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.64%
Freshwater	Environmental → Aquatic → Freshwater	7.77%
Peat	Environmental → Terrestrial → Peat	4.85%
Sediment	Environmental → Aquatic → Sediment	2.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Zoo Waste	Engineered → Solid Waste → Zoo Waste	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.31%
Loam	Environmental → Terrestrial → Soil → Loam	17.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.97%
Composting	Engineered → Solid Waste → Zoo Waste → Composting	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	4.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.97%
Unclassified	Engineered → Solid Waste → Zoo Waste → Composting → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.97%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Compost	Engineered → Solid Waste → Zoo Waste → Composting → Unclassified → Compost	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002190	Compost microbial communities from Sao Paulo Zoo, Brazil - ZC4 day 00	Engineered	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026675	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN344 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027176	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018851581	3300000364	Soil	ERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLGGEHWNVLNHLRSGAPPPP*
INPhiseqgaiiFebDRAFT_1018856511	3300000364	Soil	RHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLXGEHXXVLNHXRSGXPPPP*
INPhiseqgaiiFebDRAFT_1018869642	3300000364	Soil	LMRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVDRKHAPLGAECLENECRVTAAPECRIDIITARFQGEPRERLNGEHRSVLNHLRSGVPPPP*
AP72_2010_repI_A10DRAFT_10344132	3300000651	Forest Soil	MRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLGGEHWNVLNHLRSGAPPPP*
JGI1027J12803_1000886031	3300000955	Soil	VCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLGGEHWNVLNHLRSGAPPPP*
JGI1027J12803_1071876841	3300000955	Soil	VCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVDRKHAPLGAECLENECRVTAAPECRIDIITARFQGEPRERLNGEHRSVLNHLRSGVPPPP*
JGI12627J18819_101213821	3300001867	Forest Soil	RGEIGKRRMDDRKPHFAGKVAAAGLDGLRIPVERKHAPLGAQCLENECRMAAAPECRIDIVTARFYGQSRERLGGEHWSVLSHVRSRLSRALAQ*
metazooDRAFT_10695352	3300002190	Compost	IEQHASAWAALRVCRHERPKIGKRRLDERKPQLVGKALAPGRNGLRIAIDREHATFSTQGLENACRVTAAPERRIDIETTRLERQCVERLFDKHWRVLIHWFKRW*
Ga0062384_1003245731	3300004082	Bog Forest Soil	VCRHERGEIGKRRMDERKPHFVGKTAAAGRNGLRIPVEREHAAFSTQGLEYECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHDEISPPKCRVIA*
Ga0062387_1009533231	3300004091	Bog Forest Soil	HAPARATVRVCLHARGDIGKRRVDERKPHFVGKALTPCLDGLRVPVEREHAAFSTQGLEYECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHDEISPPKCRVIA*
Ga0062389_1034097942	3300004092	Bog Forest Soil	MLSVCVHERPEVRKRRVHERKPHFVGKTVAAGLDGLRIPIECEHAAFSTQGLEDECRMTAPPERRIDIVTARFQGQPLERLRGEHRYVLIHVRSGPPPPA*
Ga0066396_100082842	3300004267	Tropical Forest Soil	MRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP*
Ga0062595_1019331592	3300004479	Soil	GKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLGGEHWNVLNHLRSGAPPPP*
Ga0070682_1019611422	3300005337	Corn Rhizosphere	EHAPARAIVSVCVHERAEVRKRRVHERKPHFVGKAAAAGLNGLRIPVEREQAAFPTQGLENECGMAATPKRRIDIVTARFQGQPFERLSGEHRCVLIHARSGPPPPP*
Ga0070671_1015532971	3300005355	Switchgrass Rhizosphere	VEEHATARMLMRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLGGEHWNVLNHLRSGAPPPP*
Ga0070709_108790142	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RVCRHERGEIGKRRVDERKPHFVGKLLAAALDGLRIPVERKHAAFGPKCLENERRVTAAPECRIDIVPACFQGQPGECLSGEHRSVLNHVRSGAPPPP*
Ga0070711_1007897611	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VRVCRHERGEIGKRRMEERKPHFVGKALVPGRDGLRIPVECEQAAFSTQGLENECRMTATPERRIDIVTARFQGQPLERLGGEHRFVLIHGRSGPLPLPRVLVPRA*
Ga0070695_1003667782	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	IIELRRGNAEIEEHAPARAIVSVCVHERAEVRKRRVHERKPHFVGKAAAAGLNGLRIPVEREQAAFPTQGLENECGMAATPKRRIDIVTARFQGQPFERLSGEHRCVLIHARSGPPPPP*
Ga0068856_1016309962	3300005614	Corn Rhizosphere	RHERGEIGKRRMDERKPHFVGKALVASRDGLWIAVDREHATFSTQGLENECRMAATPERRIDIVTARLEGQCGERLSDKHRCVLIHDRSGETAPQSVDCC*
Ga0066903_1017502242	3300005764	Tropical Forest Soil	MRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTERLENECRVAAAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP*
Ga0068862_1006835001	3300005844	Switchgrass Rhizosphere	NTEVEEHAATRLTVRVSRHERGEIGKRRMDERKPHFVGKTLAAGRDGLWIPVDREHATFPTQGLEDLCRMTAAPKRRIDIVTARFEG*
Ga0075028_1001238621	3300006050	Watersheds	EQDTATRLTVRVCGHERGEIGKRRMDERKPHFVGKAAATGRDGLRIPIEREQATFPTEGLEDECRVTTTPERRIDIKSARFQGQPLERLGGEHRFVLNHLRSGAPPPP*
Ga0075028_1003171961	3300006050	Watersheds	VKEHAPARTIVRVCGHECAELGKRRMDERKPHFVGKAAAAGLDGLRIPVEREQAAFSTQGLEYECRMTATPERRIDIVTARFQGQPFKRLSGEHRCVLIHVRSGDPPP*
Ga0075030_1005360901	3300006162	Watersheds	RGHAEVEEHAAASTRLRVSRHERSEIGKRRVHERKPHLVGKAAAAGRDGLRIPIEREQEALPTEGLEYKCRMTATPKRRIDIVTIRFQGQPLERLRGEHRSVRIHVFVAVVCPLRSL*
Ga0070765_1006025271	3300006176	Soil	GKRRVHERKPHFVGKAAAAGRNGVRIPIEREQAAFSTQGLEYECRMTTTPERRIDIVTARFQGQPVERLSSEHGCVLIHLRSGVPPPP*
Ga0075426_108555952	3300006903	Populus Rhizosphere	MRVCRHERGEIGKRRVDERKPHFVGKLLAAGRNGLRIPVERKHAAFGPQCLENERRVTAAPECRIDIVTARFQGQPGERLSGEHRSVLNHVRSGAPPPP*
Ga0126378_131374801	3300010361	Tropical Forest Soil	HFVGKALAPGRDGLRIPIEREQAALSTQGLEYECRMTAAPKRRIDIVTARFQGQPFERLSGEHWCVLIHVRSGVPPPL*
Ga0150983_150238531	3300011120	Forest Soil	PARTIACVCRHERAEIGKRRVDERKPHFVGKTAASGLDGLRIPIDREHAAFSTQGLEYECRMAATPERRIDIETARFQGQPCERLNGEHRGVLIHV*
Ga0181531_105150961	3300014169	Bog	IGKGRVHERKPHFVGKAAAAGLDGLRIPVKREQATFSTQGLEYECRMAAAPKRRIDIVTVRLEGQCRERLCDKHGFVLIHGEISPPKCRVIA*
Ga0137420_14339663	3300015054	Vadose Zone Soil	MDERKPHFVGKTLAAGRNGLWIPVDREHRPSLPKAWRFVPYDRRAKRRIDIVTARFEGQTRERLGNEHWCVLIHFAWSRVSYPTPARPGEQP*
Ga0182037_111166581	3300016404	Soil	EIEEHAAAGTLMRVRRHERGEIGKRRMDERKPHFVGKAAVAGRDGLRVPVDREHAAFSTQGLEYECRMTATPKRRIDIVTARFQGQPFERLGGKHRCVLIHLRSGAPPPP
Ga0182039_120299591	3300016422	Soil	GKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLRAKCLENECRVAAAPKRRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0187783_101852853	3300017970	Tropical Peatland	CRHERAEVGKRRVHERKPHFVGKAAAAGRNGLRIPIEREHPPLPAQALENECRVPAAPKRRIDIVTARFQGESRERLSGEHRCVLIHVRSGTPPPP
Ga0187823_100442241	3300017993	Freshwater Sediment	PHFVGKARPAGRDGLRIAVECKQAAFSTQGLENECRMTATPERRIDIVPARFQGQPLERLCGEHRCVLIHVRSGVSPLL
Ga0187823_102737621	3300017993	Freshwater Sediment	RHAEVEEHATARMLLRVCRHERGEIGKRRVDERKPHFVGKLLAAGLDGLRIPVERKHAAFGPKCLENERRVTAAPECRIDIVPARFQGQPGECLSGEHRSVLNHVRSGAPPPP
Ga0187822_101050272	3300017994	Freshwater Sediment	ERKPHFVGKALAAGRDGLRIPVERKHAALRTHGLENERRVTATAECRIDIVTARFQGQPGERLSGEHRSVLSHVRSGVPPPP
Ga0187784_111600901	3300018062	Tropical Peatland	RRHERGEIGKRRVHERKPHFVGKAAAAGRDGRRIPIEREQAAFPTQGLEYECRVTTTPKRRIDIVTARFQGQPFERLSGEHRCVLSHI
Ga0187792_10089682	3300019265	Peatland	VRVSRHERGEIGKRRMEERKPHFVGKALAAGLDGLRVPVDREQAALGADCLEDLCRMTAAPKRRIDIVTAHFEGQSSERLVDEHRCVLIHD
Ga0206356_114429651	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	EIEEHTPTRAAVRVCLHARGDIGKRRMDERKPHFVGKALAPGRDGLRVPVDREHAAFSTQGLEYECRMAATPERRIDIVTVRLEG
Ga0179596_100532214	3300021086	Vadose Zone Soil	RVCLHARGEIGKRRVDERKPHFVGKALVPGRDGLRVPVDREHAAFSTQGLENECRMAATPERRIDIVTVRLEGQRRERLCDKHGCVLIHDEISPPKCRVIA
Ga0210404_101872963	3300021088	Soil	HFVGKAAAAGLNGLRIPVEREQATFSTQGLEDECRMTATAERRIDIVTARFQGQPCECLSGEHRCVLIHARSGPPPPP
Ga0210404_105940491	3300021088	Soil	VRWHERGEIGKRRVHERKPHFVGKAAAAGRNGVRIPIEREQAAFSTQGLEYECRMTTTPERRIDIVTARFQGQPVERLSSEHGCVLIHLRSGVPPPP
Ga0210406_100315531	3300021168	Soil	HERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPFGAQCLENECRVAAAPECRIDIVTARFQGEPRERLNGEHRNVLNHL
Ga0210405_100235937	3300021171	Soil	IVALAGRDGLRIPVERKHAPFGAQCLENECRVAAAPECRIDIVTARFQGEPRERLNGEHRNVLNHL
Ga0210396_101647504	3300021180	Soil	VRVCLHARGEIGKRRVDERKPHFVGKALAPGRDGLRVPVDREHAAFSTQGLENECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHVEISPPKCRVIA
Ga0210396_115810011	3300021180	Soil	ERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPFGAQCLENECRVAAAPECRIDIVTARFQGEPRERLNGEHRNVLNHL
Ga0210388_110309542	3300021181	Soil	EVEEHAPARAMLSVCVHERAEVRKRRVHERKPHFVGKTAAAGLDGLRIPIEREHAAFSTQGLEDECRMTATPERRIDIVTARFQGQPLERLRGEHWYVLIHVRSGPPPPA
Ga0210385_104692902	3300021402	Soil	HERAEVRKRRVHERKPHFVGKAAAAGLDGLRIPIEREHAAFSTQGLEYECRMTATPERRIDIVTARFQGQPRERLRGEHRYVLIHVRSGPPPPA
Ga0210397_105349902	3300021403	Soil	HEYAELGKRRMDERKPHFVGKAAAAGLDGLRIPVEREQAAFSTQGLENECRMTATPERRIDIKTARFQGQPLQRLSGEHRCVLIHARSGNPPP
Ga0210387_105105762	3300021405	Soil	RATVRVCLHARGEIGKRRVDERKPHFVGKALAPGRDGLRVPVDREHAAFSTQGLENECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHGEISPPKCRVIA
Ga0210387_105441502	3300021405	Soil	HARGDIGKRRVDERKPHFVGKALTPCLDGLRVPVEREHAAFSTQGLEYECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHDEISPPKCRVIA
Ga0210410_105124022	3300021479	Soil	HAATRFAVRVSRHERGEIGKRRMDERKPHFVGKTLVAGRDGLRVPIDREHAAFPTQGLEDLCRMTAAPKRRIDIVTARFEGQGRERLIDKHWRVLIHD
Ga0126371_112592831	3300021560	Tropical Forest Soil	GNAKVEEHASAGMLVRVCRHERGEIGKRRVDERKPHFVGKTVAAGRNGLRIPVEREHAAFRAKCLENECRMAAAPKRRIDIVTARFQGQPRERLSGEHRNVLNHFRSGVPPPP
Ga0242656_11248921	3300022525	Soil	AEIEEHAPARTIACVCRHERAEIGKRRVDERKPHFVGKAAAAGLDGLRIPIDREHAAFSTQGLEYECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHVEISPPKCRVIA
Ga0242674_10137702	3300022711	Soil	EIGKRRVEERKPHFAGKAAAAGRDGLRIAIECEQTAFSTQGLEYECRMTPTPERRVDIVTACFQGQPVERLRSEHGCVLIHVAKRYPPPP
Ga0242665_100953431	3300022724	Soil	GHAKIEQHTAAGALWRVRRHERGEIGKRRMHERKPHFVGKAAAAGRNGVRIPIEREQAAFSTQGLEYECRMTTTPERRIDIVTARFQGQPVERLSSEHGCVLIHLRSGVPPPP
Ga0242654_100631011	3300022726	Soil	EVEEHAPARATVRVCLHARGEIGKRRVDERKPHFVGKALAPGRDGLRVPVDREHAAFSTQGLENECRMAATPERRIDIVTVRLEGQRRERLCDKHGCVLIHDEISPPKCRVSA
Ga0207685_104865511	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AEVEEHATARMLLRVCRHERGEIGKRRVDERKPHFVGKLLAAALDGLRIPVERKHAAFGPKCLENERRVTAAPECRIDIVPACFQGQPGECLSGEHRSVLNHVRSGAPPPP
Ga0207700_120281852	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLNGEHRNVLNHLRS
Ga0207644_107739111	3300025931	Switchgrass Rhizosphere	KVEEHATARVLMRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLGGEHWNVLNHLRSGAPPPP
Ga0208068_1003492	3300026675	Soil	MRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVEREQAAFPTQGLENECGMAATPKRRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0207722_10032432	3300027003	Tropical Forest Soil	MDERKPHFVGKTLLPGRDGLRIPVERQHAAFGAQCLENECRVTAAPECRIDIVTARFQGQPGERLGGEHRSVLSHVRSGALPLP
Ga0208992_10484742	3300027176	Forest Soil	APARATVRVCLHARGEIGKRRMDERKPHFVGKALATGRDGLRVPVDREHAAFSTQGLENECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHDVISPPKCRVIA
Ga0209684_10254151	3300027527	Tropical Forest Soil	HFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0209773_101209201	3300027829	Bog Forest Soil	RRVHERKPHFVGKAAAAGLDGLRIPVEREQATFSTQGLEDECRMAATPERRIDIVTARFQGQPCECLSGEHRCVLIHARSGPPPPP
Ga0209465_105283791	3300027874	Tropical Forest Soil	MRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTQRLENECRVAAAPECRIDIVTARFQGEPRERLGGEHWNVLNHLRSGAPPPP
Ga0209275_101035933	3300027884	Soil	ARATVRVCLHARGDIGKRRVDERKPHFVGKALTPCLDGLRVPVEREHAAFSTQGLEYECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHDEISPPKCRVIA
Ga0302219_103918691	3300028747	Palsa	APARAMLSVCVHERAEVRKRRVHERKPHFVGKSAAAGLDGLRIPVEREHAAFSTQGLEDKCRMAATPERRIDIVTARFQGQPLERLRGEHWYVLIHVRSGPPPPA
Ga0302224_104242821	3300028759	Palsa	VEEHAPARAMLSVCVHERAEVRKRRVHERKPHFVGKSAAAGLDGLRIPVEREHAAFSTQGLEDKCRMAATPERRIDIVTARFQGQPLERLRGEHWYVLIHVRSGPPPPA
Ga0302234_101814602	3300028773	Palsa	DIGKRRMDERKPHFVGKALAPGLDGLRVPVEREHAAFSTQGLEYECRMAATPERRIDIVTARFQGQPLERLRGEHWYVLIHVRSGPPPPA
Ga0308309_104414303	3300028906	Soil	ERGEIGKRRMHERKPHFVGKAAAAGRNGVRIPIEREQAAFSTQGLEYECRMTTTPERRIDIVTARFQGQPVERLSSEHGCVLIHLRSGVPPPP
Ga0311370_118630302	3300030503	Palsa	LHARGDIGKRRMDERKPHFVGKALAPGLDGLRVPVEREHAAFSTQGLEYECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHDEISPPKCRVIA
Ga0210278_11035461	3300030596	Soil	ICHAPARTIACVCRHERAEIGKRRVDERKPHFVGKAAAAGRDGLRIPIDREHAAFSTQGLEYECRMAATPERRIDIETARFQGQPCERLSGEHRGVLIHV
Ga0302309_103969251	3300030687	Palsa	LSVCVHERAEVRKRRVHERKPHFVGKSAAAGLDGLRIPVEREHAAFSTQGLEDKCRMAATPERRIDIVTARFQGQPLERLRGEHWYVLIHVRSGPPPPA
Ga0265459_115583662	3300030741	Soil	RHERGEIGKRRMDERKPHFVGKALATGRDGLRVPVEREHAAFSTQGLEYECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHDEISPPKCRVIA
Ga0075386_119721271	3300030916	Soil	AAARLTARVSRHERGEIGKRRMDERKPHFVGKTLAAGRDGLRVPVDREHATFPTHGLEDLCRMTAAPKRRIDIVTARFEGQSRERLSDEHWCVLIHD
Ga0075373_115283431	3300030945	Soil	VSRHERGEIGKRRMDERKPHFVGKTLAAGRDGLWIPVDREHATFPTQGLEDLCRMTAAPKRRIDIVTARFEGQSRERLSDEHWCVLIHD
Ga0075399_112597522	3300030967	Soil	EVEEHAPARATVRVCLHARGEIGKRRVEERKPHFVGKALAPGRDGLRVPVDREHAAFSTQGLENECRMAATPERRIDIVTVRLEGQRRERLCDKHGCVLIHDEISPPKCRVIA
Ga0170824_1268768181	3300031231	Forest Soil	VRVCGHECAEFGKRRMDERKPHFVGKAAAAGLDGLRIPVEREQAAFSTQGLEYECRMTATPERRIDIVTARFQGQPFKRLSGEHRNVLIHVRSGYPPH
Ga0170820_108701492	3300031446	Forest Soil	APARTIVRVCGHECAEFGKRRMDERKPHFVGKAAAAGLNGLRIPVEREQAAFSTQGLEYECRMTATPERRIDIVTARFQGQPFKRLSGEHRCVLIHLRSGNPPP
Ga0318571_103188441	3300031549	Soil	GEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTERLENECRVATAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0318573_101131033	3300031564	Soil	DTEVEEHTPAGMLVRVCRHERGEIGKRRVDERKPHFVGKTVAAGRDGLRIPVERKHAAFRGKCLENECRMAAAAERRIDIVTARFQGQPRERLSGEHRNVLNHFRSGVPPPP
Ga0318515_100184864	3300031572	Soil	MRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTERLENECRVTTAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0318515_101082732	3300031572	Soil	VDERKPHFVGKTVAAGRDGLRIPVERKHAAFRGKCLENECRMAAAAERRIDIVTARFQGQPRERLSGEHRNVLNHFRSGVPPPP
Ga0310915_107178381	3300031573	Soil	VGKVALAGRDGLRIPVERKHAPLGTERLENECRVATAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0318496_107958262	3300031713	Soil	RHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTERLENECRVATAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0307477_106678302	3300031753	Hardwood Forest Soil	RHERGEIGKRRVDERKPHFVGKALAAGRDGLRVPVDREHAALPTHALEDLCRMTAAPKRRIDIVTARFEGQSRERLTDKHGCVLIHD
Ga0307475_104172343	3300031754	Hardwood Forest Soil	KRRMDERKPHFVGKAAAAGRDGLRIAIEREQAAFSTQGLEYECRMTPTPERRVDIVTARFQGQPGERLRGEHGCVLIHAAKRCVPPP
Ga0318509_104194321	3300031768	Soil	HAAAGMLVRVCRHERGEIGKRRVEERKPHFVGKTVAAGRDGLRIPVERKHAPFRAKCLENECRVAAAPKRRIDIVTARFQGQPRERLSGEHRNVLNHFRSGVPPPP
Ga0318547_100190792	3300031781	Soil	MRVCRHERGEIGKRRMGERKPHFVGKVALAGRDGLRIPVERKHAPLGTERLENECRVATAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0318529_103435581	3300031792	Soil	MGERKPHFVGKVALAGRDGLRIPVERKHAPLGTERLENECRVATAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0318576_105472702	3300031796	Soil	RKPHFVGKTVAAGRDGLRIPVERKHAAFRGKCLENECRMAAAAERRIDIVTARFQGQPRERLSGEHRNVLNHFRSGVPPPP
Ga0318550_100547031	3300031797	Soil	NPEIEEHATARTTWRVRRHERGEIGKRRVDERKPHFVGKTVAAGRDGLRIPVERKHAAFRAQCLENECRMTAAPERRIDIVTARFQGQSRERLSSEHWGVLNHVRSGAPPPP
Ga0306925_113553112	3300031890	Soil	MTWRVCRHERGEIGKRRVDERKPHFVGKTVAAGRDGLRIPVERKHAAFRAQCLENECRMTAAPERRIDIVTARFQGQSRERLSSEHWGVLNHVRSGAP
Ga0318520_101266991	3300031897	Soil	KPHFVGKVALAGRDGLRIPVERKHAPLGTERLENECRVTTAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0310909_114948321	3300031947	Soil	ERKPHFVGKAAVAGRDGLRIPVECKQAAFSTQGLEHACRMTATPKRRIDIVTARFQGQPFERLGGEHRCVLIHLRSGAPPPP
Ga0318559_106085032	3300032039	Soil	DERKPHFVGKTVAAGRDGLRIPVERKHAAFRGKCLENECRMAAAAERRIDIVTARFQGQPRERLSGEHRNVLNHFRSGVPPPP
Ga0318570_102706881	3300032054	Soil	GKVALAGRDGLRIPVERKHAPLGTERLENECRVATAPECRIDIVTARFQGEPGERLGGEHWNVLNHLRSGAPPPP
Ga0318533_105868301	3300032059	Soil	NPEIEEHATARTTWRVRRHERGEIGKRRVDERKPHFVGKTVAAGRDGLRIPVERKHAAFRGKCLENECRMAAAAERRIDIVTARFQGQPRERLSGEHRNVLNHFRSGVPPPP
Ga0318514_103569951	3300032066	Soil	KTVAAGRDGLRIPVERKHAAFRGKCLENECRMAAAAERRIDIVTARFQGQPRERLSGEHQNVLNHFRSGVPPPP
Ga0315742_108049962	3300032756	Forest Soil	VRVCLHARGEIGKRRVDERKPHFVGKSLAPGLDGLRVPVEREHAAFSTQGLEYECRMAATPERRIDIVTVRLEGQRRERLCDKHRCVLIHDEISPPKCRVIA
Ga0335070_116744892	3300032829	Soil	NTKVEEHATARVVLRVFRHERGEIGKRRVDERKPHFVGKAGAAGRNGLRIPVEREHAPFGPQCLENECRVTAAPECRIDIVTARFQGETGECLGGEHRSVLNHDRSGVPPPP
Ga0335081_107419461	3300032892	Soil	GKRRVEERKPHFVGKARASGRNGLWIPVDREHAAFPTHGLEDLCRMTATPERRIDIVPARFGGQSRERLSDEHGCVLIHVRSGA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099587

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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