Metagenome / Metatranscriptome Family F099564

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099564
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	104 residues
Representative Sequence	MATVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWKDFGNYMTKLESDKDWQSFLAEINSAKVPNAVMVSTGISVEVPS
Number of Associated Samples	76
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.67 %
% of genes near scaffold ends (potentially truncated)	20.39 %
% of genes from short scaffolds (< 2000 bps)	85.44 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.961 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.447 % of family members)
Environment Ontology (ENVO)	Unclassified (31.068 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.165 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.58% β-sheet: 25.56% Coil/Unstructured: 42.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.58.4.18: YbaA-like	d2okqa1	2okq	0.7326
d.58.4.23: Marine metagenome family DABB3	d2pgca1	2pgc	0.70095
d.58.4.0: automated matches	d5xzta_	5xzt	0.68289
d.58.4.4: Plant stress-induced protein	d1tr0a_	1tr0	0.68208
d.58.4.0: automated matches	d3qmqa1	3qmq	0.67971

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01243	Putative_PNPOx	5.83
PF02586	SRAP	4.85
PF05199	GMC_oxred_C	3.88
PF04828	GFA	2.91
PF13418	Kelch_4	1.94
PF02771	Acyl-CoA_dh_N	0.97
PF12172	DUF35_N	0.97
PF01796	OB_aCoA_assoc	0.97
PF00441	Acyl-CoA_dh_1	0.97
PF11964	SpoIIAA-like	0.97
PF13560	HTH_31	0.97
PF12728	HTH_17	0.97
PF02310	B12-binding	0.97
PF06283	ThuA	0.97
PF11999	Ice_binding	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	4.85
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	3.88
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.91
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.94
COG1545	Uncharacterized OB-fold protein, contains Zn-ribbon domain	General function prediction only [R]	0.97
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.96 %
All Organisms	root	All Organisms	32.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.96 %
cellular organisms	root	All Organisms → cellular organisms	32.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.94 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.94 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.97 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.94 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.94 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.94 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.96 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.94 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100773062	Not Available	1203	Open in IMG/M
3300003220\|JGI26342J46808_1002675	Not Available	1545	Open in IMG/M
3300004063\|Ga0055483_10101426	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300004080\|Ga0062385_10908513	Not Available	585	Open in IMG/M
3300004080\|Ga0062385_11281236	Not Available	504	Open in IMG/M
3300004082\|Ga0062384_100599608	Not Available	746	Open in IMG/M
3300004091\|Ga0062387_100383431	Not Available	941	Open in IMG/M
3300004091\|Ga0062387_100471428	Not Available	868	Open in IMG/M
3300004092\|Ga0062389_101706031	Not Available	811	Open in IMG/M
3300004139\|Ga0058897_10457283	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300004152\|Ga0062386_100075913	All Organisms → cellular organisms → Bacteria	2560	Open in IMG/M
3300004152\|Ga0062386_100280084	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300004635\|Ga0062388_102093087	Not Available	587	Open in IMG/M
3300005538\|Ga0070731_11012574	Not Available	550	Open in IMG/M
3300005591\|Ga0070761_10219729	All Organisms → cellular organisms → Bacteria → Proteobacteria	1130	Open in IMG/M
3300005921\|Ga0070766_10683766	Not Available	694	Open in IMG/M
3300006176\|Ga0070765_101726675	Not Available	588	Open in IMG/M
3300007819\|Ga0104322_137604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2007	Open in IMG/M
3300009038\|Ga0099829_10071323	Not Available	2635	Open in IMG/M
3300009038\|Ga0099829_11788717	Not Available	503	Open in IMG/M
3300009088\|Ga0099830_10460483	Not Available	1034	Open in IMG/M
3300009088\|Ga0099830_10489327	Not Available	1002	Open in IMG/M
3300009089\|Ga0099828_10115351	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2341	Open in IMG/M
3300009683\|Ga0116224_10265134	Not Available	819	Open in IMG/M
3300009683\|Ga0116224_10491291	Not Available	585	Open in IMG/M
3300009698\|Ga0116216_10069866	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300010339\|Ga0074046_10000189	All Organisms → cellular organisms → Bacteria	52885	Open in IMG/M
3300010339\|Ga0074046_10206740	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300010341\|Ga0074045_10054566	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300010341\|Ga0074045_10753685	Not Available	617	Open in IMG/M
3300010343\|Ga0074044_10618005	Not Available	707	Open in IMG/M
3300010379\|Ga0136449_104321250	Not Available	525	Open in IMG/M
3300011120\|Ga0150983_12223398	Not Available	845	Open in IMG/M
3300011120\|Ga0150983_13576998	Not Available	565	Open in IMG/M
3300011269\|Ga0137392_10970213	Not Available	699	Open in IMG/M
3300011269\|Ga0137392_10976538	Not Available	696	Open in IMG/M
3300011270\|Ga0137391_10394401	Not Available	1184	Open in IMG/M
3300012189\|Ga0137388_10207985	Not Available	1766	Open in IMG/M
3300012189\|Ga0137388_10591197	Not Available	1032	Open in IMG/M
3300012361\|Ga0137360_10091548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2306	Open in IMG/M
3300012363\|Ga0137390_10116535	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300012363\|Ga0137390_11518972	Not Available	610	Open in IMG/M
3300012929\|Ga0137404_10460076	Not Available	1130	Open in IMG/M
3300014501\|Ga0182024_10199266	Not Available	2739	Open in IMG/M
3300014501\|Ga0182024_12380178	Not Available	574	Open in IMG/M
3300017823\|Ga0187818_10191460	Not Available	893	Open in IMG/M
3300017942\|Ga0187808_10487847	Not Available	570	Open in IMG/M
3300017943\|Ga0187819_10037484	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300018006\|Ga0187804_10581476	Not Available	508	Open in IMG/M
3300018088\|Ga0187771_10023206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4652	Open in IMG/M
3300019165\|Ga0184589_101099	Not Available	874	Open in IMG/M
3300020579\|Ga0210407_10248132	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300020579\|Ga0210407_11429407	Not Available	512	Open in IMG/M
3300020583\|Ga0210401_10026643	All Organisms → cellular organisms → Bacteria	5523	Open in IMG/M
3300020583\|Ga0210401_10804360	Not Available	800	Open in IMG/M
3300020583\|Ga0210401_11354518	Not Available	569	Open in IMG/M
3300021170\|Ga0210400_10281005	Not Available	1364	Open in IMG/M
3300021170\|Ga0210400_10358390	Not Available	1201	Open in IMG/M
3300021171\|Ga0210405_10511165	Not Available	941	Open in IMG/M
3300021181\|Ga0210388_10053070	All Organisms → cellular organisms → Bacteria → Proteobacteria	3384	Open in IMG/M
3300021402\|Ga0210385_10226813	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300021406\|Ga0210386_10961351	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300021432\|Ga0210384_10432086	Not Available	1186	Open in IMG/M
3300021432\|Ga0210384_10474440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1127	Open in IMG/M
3300022499\|Ga0242641_1037954	Not Available	551	Open in IMG/M
3300022531\|Ga0242660_1100090	Not Available	708	Open in IMG/M
3300025952\|Ga0210077_1104654	Not Available	591	Open in IMG/M
3300026514\|Ga0257168_1066530	Not Available	795	Open in IMG/M
3300026551\|Ga0209648_10470986	Not Available	759	Open in IMG/M
3300027645\|Ga0209117_1106708	Not Available	760	Open in IMG/M
3300027698\|Ga0209446_1080303	Not Available	834	Open in IMG/M
3300027701\|Ga0209447_10012272	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300027701\|Ga0209447_10066242	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	991	Open in IMG/M
3300027812\|Ga0209656_10264356	Not Available	808	Open in IMG/M
3300027824\|Ga0209040_10174065	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300027846\|Ga0209180_10141263	Not Available	1385	Open in IMG/M
3300027862\|Ga0209701_10185328	Not Available	1250	Open in IMG/M
3300027862\|Ga0209701_10284759	Not Available	955	Open in IMG/M
3300027875\|Ga0209283_10321027	Not Available	1019	Open in IMG/M
3300027903\|Ga0209488_10216644	All Organisms → cellular organisms → Bacteria → Acidobacteria	1441	Open in IMG/M
3300028906\|Ga0308309_10522309	Not Available	1028	Open in IMG/M
3300029636\|Ga0222749_10231270	Not Available	935	Open in IMG/M
3300030494\|Ga0310037_10213945	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300031057\|Ga0170834_103369400	Not Available	1205	Open in IMG/M
3300031057\|Ga0170834_105181291	Not Available	529	Open in IMG/M
3300031057\|Ga0170834_111654048	Not Available	529	Open in IMG/M
3300031122\|Ga0170822_10705676	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300031128\|Ga0170823_17064881	Not Available	1953	Open in IMG/M
3300031708\|Ga0310686_114391018	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1445	Open in IMG/M
3300031708\|Ga0310686_116393687	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300031718\|Ga0307474_11394198	Not Available	552	Open in IMG/M
3300031718\|Ga0307474_11566405	Not Available	518	Open in IMG/M
3300031754\|Ga0307475_10192926	Not Available	1627	Open in IMG/M
3300031754\|Ga0307475_10210069	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300031820\|Ga0307473_10226480	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300031823\|Ga0307478_10387506	Not Available	1156	Open in IMG/M
3300031866\|Ga0316049_122635	Not Available	517	Open in IMG/M
3300031962\|Ga0307479_10542573	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300031962\|Ga0307479_12182906	Not Available	501	Open in IMG/M
3300032174\|Ga0307470_10258519	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300032515\|Ga0348332_12882266	Not Available	798	Open in IMG/M
3300032515\|Ga0348332_13313474	Not Available	519	Open in IMG/M
3300033486\|Ga0316624_11404930	Not Available	640	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.61%
Aquatic	Environmental → Aquatic	20.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.67%
Freshwater	Environmental → Aquatic → Freshwater	18.45%
Marine	Environmental → Aquatic → Marine	1.94%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.74%
Loam	Environmental → Terrestrial → Soil → Loam	7.77%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.94%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.13%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.94%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.94%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	14.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.85%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.94%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004063	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025952	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1007730622	3300000364	Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNQTSGPNAGTVAVVVEHSDWKDFGNYMTKLESDKDWQSFLAEINSAKVPNAVMVSTGISVEVPS*
JGI26342J46808_10026753	3300003220	Bog Forest Soil	MATVSQVTFLKPQPGRLEALMRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLESDRDWQAFMTEISSAKSPNAERTAVGINVEVPS*
Ga0055483_101014262	3300004063	Natural And Restored Wetlands	MPTVSQVLFLKPQPGRLEAVMRDLSKAHNIVKRAGGKLRAWNEVSGPNAGTIAVVVEHSDWKDFGNYMAKLESDKDWQAFLAEINSAKAPNAERVSSGLSVEVPS*
Ga0062385_109085131	3300004080	Bog Forest Soil	MPAVSQLLFLKPQPGRLEALMRDLVRAQKIVKRAGATFRAWNEVSGPNAGAIAVVIEHSDWKEFGNYMANIESDRDWQSFMAEINAAKSPNAERIGTGINVEIPS*
Ga0062385_112812362	3300004080	Bog Forest Soil	MAAVSSVLFLKPLPGRLEALMRDIGRAQKIIMRLGGTLRAYNETSGPNAGTIALVTEHSDWKDYGNYMAKLETDQDWQSFITEINSAKSPNAERVVPALNVELPS*
Ga0062384_1005996081	3300004082	Bog Forest Soil	MPAVSQLLFLKPQPGRLEALMRDLVRAQKIVKRAGATLRAWNEVSGPNAGAIAVVIEHSDWKEFGNYMANIESDRDWQSFMAEINAAKSPNAERIGTGINVEIPS*
Ga0062387_1003834311	3300004091	Bog Forest Soil	MAAVSSVLFLKPVPGRLEALMRDIARAGKIIKRMGGSLRAHNEVSGPNAGTIALVIEHSDWKDYGNYMAKTETDKDWQSFIAEISSTKSPNAERVAVGLNVEVPS*
Ga0062387_1004714282	3300004091	Bog Forest Soil	MAAVSSVLFLKPLPGRLEALMRDIGRAQKIIMRLGGTLRAYNETSGPNAGTIALVTEHSDWKDYGNYMAKLETDQDWQSFITEINSAKSPNAERVVSALNVELPS*
Ga0062389_1017060312	3300004092	Bog Forest Soil	MATVSNVVFLKPQPGRLEAFMRDLARANNIVKRAGGKLRAWNETSGPNAGTVAVVVEHDDWKAYGNYMAKLESDSDWQAFIAEITSAKAPNAEVVATGLNVEVPS*
Ga0058897_104572832	3300004139	Forest Soil	MPTVSNIVFLKPQPGRLEAFMRDLAKANNIIKRAGGKFRAWNEMYGPNAGTVAVVVEHSDWKDYGTYMAKLESDTDWQAFMAEVSSAKAPNAEVVGTGLNVEVPN*
Ga0062386_1000759132	3300004152	Bog Forest Soil	MATVSQVTFLKPQPGRLEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHGDWKNFADYMTKLDTDRDWQAFMAEISSTKSPNAERTATAINVEVPS*
Ga0062386_1002800842	3300004152	Bog Forest Soil	MATVSQVLFLKPQPGRLEALMRDIAKASKIVKRAGATLRAWNEVSGPNTGSIAVVVEHSDWKDFGSYMTKLESDSEWQAFMAEISSTKSPNAEQLASGINVEVPS*
Ga0062388_1020930871	3300004635	Bog Forest Soil	MATVSNVVFLKPQPGRLEAFMRDLARANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHDDWKAYGNYMAKLESDSDWQAFIAEITSAKAPNAEVVATGLNVEVPS*
Ga0070731_110125741	3300005538	Surface Soil	MAAVSQILFLKPQPGRVEALMRDISKACNIVKRNGGKFRAYNEVSGPNAGTVAVVVEHNDWKDFGSYMTKLESDKDWQAFQAEISSTKAPNAEMVSTGINVEVPS*
Ga0070761_102197292	3300005591	Soil	MATVSQVTFLKPQPGRLEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFAEYMTKLDSDRDWQAFMAEISSAKSPNAERTATAINVEVPS*
Ga0070766_106837662	3300005921	Soil	LEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLDSDRDWQAFMAEINSTKSPNAERTAVGINVEVPS*
Ga0070765_1017266751	3300006176	Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNEVSGPNAGTVAVVVEHSDWKDFGSYMTKLDSDKDWQAFLAEINSAKALNAERISTGI
Ga0104322_1376043	3300007819	Permafrost Soil	MAAVSSVLFLKPLPGRLEALMRDIGRAQKIITRLGGTLRAYNETSGPNAGTIALVTEHSDWKDYGNYMAKLETDKDWQSFITEINSAKSPNAERVVSALNVELPS*
Ga0099829_100713234	3300009038	Vadose Zone Soil	MQEAHMAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRTGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKASNAVMVSTGISVEVPS*
Ga0099829_117887171	3300009038	Vadose Zone Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVALVIEHSDWKDYGNYMTKLDSDKDWQAFLAEINSAKAPNAVMVSTGISVEVPS*
Ga0099830_104604832	3300009088	Vadose Zone Soil	MQEAHMAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRGWNETSGPNAGTVAVVVEHSDWKGFGNYMTKLDSDKEWQAFLAEINSAKAPNAVMISTGISVEVPS*
Ga0099830_104893273	3300009088	Vadose Zone Soil	LKPQPGRLEAFMHDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKASNAVMVSTGISVEVPS*
Ga0099828_101153512	3300009089	Vadose Zone Soil	MQEAHMAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKASNAVMVSTGISVEVPS*
Ga0116224_102651342	3300009683	Peatlands Soil	MATVSQVVVLKPQPGRVEALMRDVAKASKIVKRAGATFRAWNEVSGPNTGTIAIVIEHSDWKEFGSYMTKLESDSDWQAFLAEINSTKSPNAERLATGINVEVPS*
Ga0116224_104912911	3300009683	Peatlands Soil	IMAAVSSVVFLKPLPGRLEALMRDIGRAQKMIKRMGGTLRAYNEASGPNAGAIALVVEHSDWKEYGNYMAKLETDKDWQSFVAEISSAKSPNAERVATGLNVELPS*
Ga0116216_100698663	3300009698	Peatlands Soil	MATVSQVVFLKPQPGRVEALMRDVAKASKIVKRAGATFRAWNEVSGPNTGTIAIVIEHSDWKEFGSYMTKLESDSDWQAFLAEINSTKSPNAERLATGINVEVPS*
Ga0074046_1000018954	3300010339	Bog Forest Soil	MAAVSSVVFLKPLPGRLEALMRDIGRAQKMIKRMGGTLRAYNEASGPNAGAIALVVEHSDWKEYGNYMAKLETDKDWQSFVAEISSAKSPNAERVATGLNVELPS*
Ga0074046_102067403	3300010339	Bog Forest Soil	MATVSQVTFLKPQPGRLEALMRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHNDWKNFADYMTKLDSDRDWLAFIAEINSAKSPNAERTAVGINVEVPS*
Ga0074045_100545664	3300010341	Bog Forest Soil	MATVSQVLFLKPQPGRLEALMRDLTKANNIIKRAGGKLRAWNEVSGPNAGTIAVVVEHSDWKDFGNYMAKLESDKDWQAFIVEINAAKSPNAERVATGINVDVPN*
Ga0074045_107536851	3300010341	Bog Forest Soil	MRDIAKASKIIKRAGGNVRAWNEVSGQNAGTIAIVVEHSDWKNFGDYMTKLEADRDWQAFMTEISSAKSPNAERTAVGINVEVPS*
Ga0074044_106180051	3300010343	Bog Forest Soil	VVLKPQPGRLEAFMRDVAKVDKIIKRLGGKLRAWNEVSGPNPGTVALVVEFSDWKDFGNYMAKREADTELQAFISEVISSKSPNAEIVATGLNVEVPS*
Ga0136449_1043212502	3300010379	Peatlands Soil	ATVSNVLFLKPLPGRLEALMRDIAKASNIIKRAGGKFRAWNEVSGPNAGTIALVIEHSDWKDYGNYMAKLETDKDWQSFITEINSAKSPNAERVVSALNVEVPS*
Ga0150983_122233982	3300011120	Forest Soil	MATVSQVTFLKPQPGRLEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLDSDRDWPAFMAEINSTKSPNAERTAVGINVEVPS*
Ga0150983_135769981	3300011120	Forest Soil	MAAVSSVLFLKPLPGRLEALMRDIGRAKKIITRIGGTLRAYNETSGPNAGTIALVTEHSDWKDYGNYMAKLETDHDWQSFITEINSAKSPNAERVVSALNVEVPS*
Ga0137392_109702131	3300011269	Vadose Zone Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNILKRVGGKVRAWNETSGPNAGTVAVVIEHSDWNDFGNYMTKLDSDKDWQAFLAEINSAKAPNSVLVSTGISVEVPS*
Ga0137392_109765382	3300011269	Vadose Zone Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWKGFGNYMTKLDSDKEWQAFLAEINSAKAPNAVMISTGISVEVPS*
Ga0137391_103944013	3300011270	Vadose Zone Soil	SALTSPTILLTRQEAHMPAVSQVLFLKPQPGRLEAFMRDLAKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWKGFGNYMTKLDSDKEWQAFLAEINSAKAPNAVMISTGISVEVPS*
Ga0137388_102079851	3300012189	Vadose Zone Soil	MQEAHMAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDRDWQAFLAEINSAKASNAVMVSTGISVEVPS*
Ga0137388_105911973	3300012189	Vadose Zone Soil	MAAVSKVLYLKPQPGRLEAFMRDLSKANNILKRVGGKVRAWNETSGPNAGTVAVVIEHSDWNDFGNYMTKLDSDKDWQAFLAEINSAKAPNSVLVSTGISVEVPS*
Ga0137360_100915484	3300012361	Vadose Zone Soil	MQEAHMAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKAPNAVMVSTGISVEVPS*
Ga0137390_101165354	3300012363	Vadose Zone Soil	MQEAHMAAVSQVLFLKPQPGRLEAFMHDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDRDWQAFLAEINSAKASNAVMVSTGISVEVPS*
Ga0137390_115189721	3300012363	Vadose Zone Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVIEHSDWKDYGNYMTKLDSDKDWQAFLAEINSAKAPNAVMVSTGISVEVPS*
Ga0137404_104600762	3300012929	Vadose Zone Soil	MQEAHMAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWKDFGSYMTKLESDKDWQAFLVEINSAKAPNAVMVSTGISVEVPS*
Ga0182024_101992663	3300014501	Permafrost	MAAVSSVLFLKPLPGRLEALLRDMGRAQKIIKRVGGTIRAWNEVSGPNAGTMAVVIEHSDWKDYGNYMAKIETDKDWQSFMAEINSAKSPNAERVATGLNVELPS*
Ga0182024_123801781	3300014501	Permafrost	MATVSNILFLKPQPGRLEALMRDIAKAGNMIKRAGGKFRAYDEVSGPNAGAIALVTEHSDWKDYGNYMTKLETDKDWQSFIAEINPAKSPNAERVATGLNVEVPS*
Ga0187818_101914602	3300017823	Freshwater Sediment	MAAVSSVVFLKPLPGRLEALMRDIGRAQKMIKRMGGTLRAYNEASGPNAGAIALVVEHSDWKEYGNYMAKLETDKDWQSFVAEISSAKSPNAERVATGLNVELPS
Ga0187808_104878471	3300017942	Freshwater Sediment	TRQEAYMAVVSQILFLKPQPGRLEALMRDIAKANKIIKRAGGKLRAWNEVSGPNAGTIAVVVEHSDWKDFGNYMAKLEADKDWQAFIVEINAAKSPNAERVATGINVDVPN
Ga0187819_100374841	3300017943	Freshwater Sediment	MAAVSSVVFLKPLPGRLEALMRDIGRAQKMIKRMGGTLRAYNEASGPNAGAIALVVEHSDWKEYGNYMAKLETDKDWQSFVAEINSAKSPNAERVTTGLNVELPS
Ga0187804_105814762	3300018006	Freshwater Sediment	MAAVSSVVFLKPLPGRLEALMRDIGRAQKMIKRMGGTLRAYNEASGPNAGAIALVVEHSDWKEYGNYMAKLETDKDWQSFVAEISSAKSPNAE
Ga0187771_100232065	3300018088	Tropical Peatland	MATVSQVLFLKPQPGRLEAMMRDLARAKGIVTRAGGNFRAWNEMSGVNAGAIAVVVEHADWKDFGSYMAKLEADKDYQAFIAELNARKDPNTVRLAAGINVEVPS
Ga0184589_1010991	3300019165	Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRVGGNVRAWNEVSGPNAGTVAVVVEHNDWKDFGNYMAKLESDRDWQSFLAEINSAKAPNAEIVATGINVDLPS
Ga0210407_102481323	3300020579	Soil	MAAVSEILFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHGDWKDFGNYMTKLESDKDWQSFLAEINSAKAPNAVMVSTGISVEVPS
Ga0210407_114294071	3300020579	Soil	PQPGRLEAFMRDLAKANNIIKRAGGKFRAWNEMYGPNAGTVAVVVEHSDWKDYGTYMAKLESDTDWQAFMAEVSSAKAPNAEVVGTGLNVEVPS
Ga0210401_100266436	3300020583	Soil	MPTVSNIVFLKPQPGRLEAFMRDLAKANNIIKRAGGKFRAWNETYGPNAGTVAVVVEHSDWKDYGTYMAKLESDTDWQAFMAEVSSAKAPNAEVVGTGLNVEVPS
Ga0210401_108043602	3300020583	Soil	MATVSQVTFLKPQPGRLEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLDSDRDWQAFMAEINSTKSPNAERTAVGINVEVPS
Ga0210401_113545181	3300020583	Soil	MATVSNVLFLKPLPGRLEALMRDIAKASNIIKRAGGKFRAWNEVSGPNAGTIALVIEHSDWKDYGNYMAKLEADKDWQSFIAEIN
Ga0210400_102810051	3300021170	Soil	MAAVSQVLFLKPQPGRLEAFMRDLTRANNIIKRAGGKLRAWNETSGPNAGAVAVVVEHSDWKDFGSYMAKLESDKDWQAFLAEINSAKAPNAERVSSMINVEVPS
Ga0210400_103583902	3300021170	Soil	MPTVSNIVFLKPQPGRLEAFMRDLAKANNIIKRAGGKFRAWNEMYGPNAGTVAVVVEHSDWKDYGSYMAKLESDTDWQAFMAEVSSAKAPNAEVVGTGLNVEVPS
Ga0210405_105111652	3300021171	Soil	MPTVSNIVFLKPQPGRLEAFMRDLAKANNIIKRAGGKFRAWNEMYGPNAGTVAVVVEHSDWKDYGTYMAKLESDTDWQAFMAEVSSAKAPNAEVVGTGL
Ga0210388_100530705	3300021181	Soil	MAAVSSVLFLKPLPGRLEALMRDIGRAQKIITRMGGTLRAYNETSGPNAGTIALVTEHSDWKDYGNYMAKLETDQDWQSFITEINSAKSPNAERVVSALNVEVPS
Ga0210385_102268133	3300021402	Soil	MATVSQVTFLKPQPGRLEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLDSDHDWQAFMAEINSTKSPNAERTAVGINVEVPS
Ga0210386_109613512	3300021406	Soil	MATVSQVTFLKPQPGRLEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLDSDHDWQAFMAEINSTKSPNAERTAVG
Ga0210384_104320862	3300021432	Soil	MPTVSNIVFLKPQPGRLEAFMRDLARANNIIKRAGGKFRAWNEMYGPNAGTVAVVVEHSDWKDYGTYMAKLESDTDWQAFMAEVSSAKAPNAEVVGTGLNVEVPS
Ga0210384_104744402	3300021432	Soil	MAAVSQILFLKPQPGRVEALMRDISKACNIVKRNGGKFRAYNEVSGPNAGTVAVVVEHNDWKDFGAYMTKLESDKDWQEFQAEISSTKAPNAEMVSTGINVEVPS
Ga0242641_10379541	3300022499	Soil	MATVSQVTFLKPQPGRLEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLDSDRDWQAFMAEINSTKSPNAERTATAINVEVPS
Ga0242660_11000902	3300022531	Soil	MPTVSNIVFLKPQPGRLEAFMRDLARANNIIKRAGGKFRAWNEMYGPNAGTVAVVVEHSDWKDYGSYMAKLESDTDWQAFMAEVSSAKAPNAEVVGTGLNVEVPS
Ga0210077_11046541	3300025952	Natural And Restored Wetlands	MPTVSQVLFLKPQPGRLEAVMRDLSKAHNIVKRAGGKLRAWNEVSGPNAGTIAVVVEHSDWKDFGNYMAKLESDKDWQAFLAEINSAKAPNAERVSSGLSVEVPS
Ga0257168_10665301	3300026514	Soil	MAAVSQVLFLKPQPGRLEAFMRDLTRANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWKDFGSYMAKLESDKDWQAFLAEINSAKAPNAEMVSTGISVEVPS
Ga0209648_104709862	3300026551	Grasslands Soil	VSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKASNAVMVSTGISVEVPS
Ga0209117_11067082	3300027645	Forest Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWKDYGNYMTKLESDRDWQAFLAEINSAKAPNAIMVSTGISVEVPS
Ga0209446_10803033	3300027698	Bog Forest Soil	MATVSQVTFLKPQPGRLEALMRDIAKASKIIKRAGGNIRAWNEVSGPNAETIAIVVEHSDWKNFADYMTKLESDRDWQAFMTEISSAKSPNAERTAVGINVEVPS
Ga0209447_100122723	3300027701	Bog Forest Soil	MATVSQVTFLKPQPGRLEALMRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLESDRDWQAFMTEISSAKSPNAERTAVGINVEVPS
Ga0209447_100662421	3300027701	Bog Forest Soil	LLFLKPQPGRLEALMRDLVRAQKIVKRAGATFRAWNEVSGPNAGAIAVVIEHSDWKEFGNYMANIESDRDWQSFMAEINAAKSPNAERIGTGINVEIPS
Ga0209656_102643562	3300027812	Bog Forest Soil	MATVSQVTFLKPQPGRLEALTRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHGDWKNFADYMTKLDTDRDWQAFMAEISSTKSPNAERTATAINVEVPS
Ga0209040_101740653	3300027824	Bog Forest Soil	MATVSQVTFLKPQPGRLEAVMRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLDSDRDWQAFMAEINSAKSPNAERTAVGINVEVPS
Ga0209180_101412632	3300027846	Vadose Zone Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRTGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKASNAVMVSTGISVEVPS
Ga0209701_101853282	3300027862	Vadose Zone Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRGWNETSGPNAGTVAVVVEHSDWKGFGNYMTKLDSDKEWQAFLAEINSAKAPNAVMVSTGISVEVPS
Ga0209701_102847593	3300027862	Vadose Zone Soil	RDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKASNAVMVSTGISVEVPS
Ga0209283_103210271	3300027875	Vadose Zone Soil	EAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKASNAVMVSTGISVEVPS
Ga0209488_102166441	3300027903	Vadose Zone Soil	MAAVSQVLFLKPQPGRLEAFMHDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWNDFGNYMTKLESDKDWQAFLAEINSAKASNAVMVSTGISVEVPS
Ga0308309_105223091	3300028906	Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNEVSGPNAGTVAVVVEHSDWKDFGSYMTKLDSDKDWQAFLAEINSAKALNAERIS
Ga0222749_102312702	3300029636	Soil	MPTVSNIVFLKPQPGRLEAFMRDLAKANNIIKRAGGKFRAWNEMYGPNAGTVAVVVEHSDWKDYGTYMAKLESDTDWQAFMAEVSSAKAPNAEVVG
Ga0310037_102139451	3300030494	Peatlands Soil	MATVSQVVFLKPQPGRVEALMRDVAKASKIVKRAGATFRAWNEVSGPNTGTIAIVIEHSDWKEFGSYMTKLESDSDWQAFLAEINSTKSPNAERLATGINVEVPS
Ga0170834_1033694002	3300031057	Forest Soil	MATVSNVLFLKPLPGRLEALMRDIAKASNIIKRAGGKFRAWNEVSGPNAGTIALVIEHSDWKDYGNYMAKLESDKDWQSFIAEINSAKSPNAERLVSALNVEVPS
Ga0170834_1051812911	3300031057	Forest Soil	MATVSNVLFLKPLPGRLEALMRDIAKASNIIKRAGGKFRAWNEVSGPNAGTIAVVVEHSDWKDYGNYMAKLESDKDWQSFMAEINSAKSPNAERLVSALNVEVPS
Ga0170834_1116540481	3300031057	Forest Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKASNIIKRTGGKLRAWNETSGPNAGTVAVVVEHSDWKDFGNYMTKLESDKDWQSFLAEINSAKTPNAVMVSTGISVEVPS
Ga0170822_107056761	3300031122	Forest Soil	MATVSNVLFLKPLPGRLEAVMRDIAKASNIIKRAGGKFRAWNEVSGPNAGTIALVIEHSDWKDYGNYMAKLESDKDWQSFIAEINSAKSPNAERLVSALNVEVPS
Ga0170823_170648812	3300031128	Forest Soil	MATVSNVLFLKPQPGRLEALMRDITKASHIIKRAGGKFRAWNEVSGPNAGTIALVIEHSDWKDYGNYMAKLESDKDWQSFIAEINSAKSPNAERLVSALNVEVPS
Ga0310686_1143910184	3300031708	Soil	MATVSNVVFLKPQPGRMEAFMRDLAKANNIIKRAGGKLRAWNEMSGPNAGTIAVVVEHSDWKDYGNYMAKLESDSDWQSFIAEINSAKAPNAEIVATGLNVEVPS
Ga0310686_1163936872	3300031708	Soil	MATVSQVTFLKPQPGRLEALMRDIAKASKIIKRAGGNIRAWNEVSGPNAGTIAIVVEHSDWKNFADYMTKLDSDRDGQAFMAEINSAKSPNAERTAVGINVEVPS
Ga0307474_113941981	3300031718	Hardwood Forest Soil	MAAVSQILFLKPQPGRVEALMRDISKACNIVKRNGGKFRAYNEVSGPNAGTVAVVVEHNDWKDFGSYMTKLESDKDWQAFQAEISSTKAPNAEMVSTGINVEVPS
Ga0307474_115664051	3300031718	Hardwood Forest Soil	RLEALMRDIARASNIIKRAGGKFRAWNEVSGPNAGTIALVIEHSDWKDYGNYMAKLESDKDWQSFIAEINSAKSPNAERLVSALNVEVPS
Ga0307475_101929262	3300031754	Hardwood Forest Soil	MAAVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHGDWKDFGNYMTKLESDKDWQSFLAEINSAKAPNAVMVSTGINVEVPS
Ga0307475_102100691	3300031754	Hardwood Forest Soil	MATVSNVLFLKPQPGRLEALMRDIARASNIIKRAGGKFRAWNEVSGPNAGTIALVIEHSDWKDYGNYMAKLESDKDWQSFIAEINSAKSPNAERLVSALNVEVPS
Ga0307473_102264803	3300031820	Hardwood Forest Soil	MATVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWKDFGNYMTKLESDKDWQSFLAEINSAKVPNAVMVSTGISVEVPS
Ga0307478_103875062	3300031823	Hardwood Forest Soil	MATVSNVLFLKPLPGRLEALMRDIAKASNIIKRAGGKFRAWNEVSGPNAGTIALVTEHSDWKDYGNYMTKLETDKDWQSFIAEINSAKSPNAERLVSALNVEVPS
Ga0316049_1226352	3300031866	Soil	MATVSNVVFLKPQPGRMEAFMRDLAKANNIIKRAGGKLRAWNEMSGPNAGTIAVVVEHSDWKGYGNYMAKLESDSDWQSFIAEINSAKAPNAEVVATGLNVEVPS
Ga0307479_105425733	3300031962	Hardwood Forest Soil	MAVVSNVTFLKPQPGRLEALMRDIARASNIIKRAGGKFRAWNEVSGPNAGTIALVIEHSDWKDYGNYMAKLESDKDWQSFIAEINSAKSPNAERLVSALNVEVPS
Ga0307479_121829061	3300031962	Hardwood Forest Soil	SNVLFLKPLPGRLEALMRDIAKASNIIKRAGGKFRAWNEVSGPNAGTIALVTEHSDWKDYGNYMAKIETDKDWQSFITEINSAKSPNAERVAAGLNVEVPS
Ga0307470_102585193	3300032174	Hardwood Forest Soil	MATVSQVLFLKPQPGRLEAFMRDLSKANNIIKRAGGKLRAWNETSGPNAGTVAVVVEHSDWKDFGNYMTKLESDKDWQSFLAEINSAKLPNAVMVSTGISVEVPS
Ga0348332_128822662	3300032515	Plant Litter	MAVVSNVTFLKPLPGRLEALMRDIARVQKIAKRAGGTLRAWNEVSGPNAGTIAVVVEHSDWKDFGNYMAKLESDSDWQAFLAEISSTKSPNAERIGTGINVELPS
Ga0348332_133134741	3300032515	Plant Litter	MAAVSQVLFLKPEPGRLEALMRDLTRASNIIKRAGGQLRAWNEVSGPNAGNLAVVVEHSDWKDFGNYMAKLESDRDWQSFLAEINSTKAPNAERVSAGISVELPS
Ga0316624_114049302	3300033486	Soil	MAAVSSVLFLKPLPGRLEALMRDIGRAGKIIKRVGGTLRAYNEVSGPNAGTIALVIEHSDWKDYGNYMAKIETDKDWQSFMAEINSAKSPNAERVASGLNVEVPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099564

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences