Metagenome / Metatranscriptome Family F099552

Basic Information
Family ID	F099552
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	103 residues
Representative Sequence	MRARLVVFVALMLGLTALPAQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN
Number of Associated Samples	77
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.55 %
% of genes near scaffold ends (potentially truncated)	32.04 %
% of genes from short scaffolds (< 2000 bps)	78.64 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (56.311 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (24.272 % of family members)
Environment Ontology (ENVO)	Unclassified (39.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.456 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 19.70% β-sheet: 9.85% Coil/Unstructured: 70.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF10027	DUF2269	31.07
PF00436	SSB	22.33
PF13186	SPASM	3.88
PF05402	PqqD	1.94
PF12770	CHAT	1.94
PF07859	Abhydrolase_3	1.94
PF07883	Cupin_2	0.97
PF03729	DUF308	0.97
PF01381	HTH_3	0.97
PF00884	Sulfatase	0.97
PF00326	Peptidase_S9	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	22.33
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	22.33
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.94
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.31 %
Unclassified	root	N/A	43.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.31 %
Unclassified	root	N/A	43.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.31 %
Unclassified	root	N/A	43.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.91 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.94 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.69 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1.94 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.97 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120976422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4233	Open in IMG/M
3300004633\|Ga0066395_10363974	Not Available	807	Open in IMG/M
3300004633\|Ga0066395_10411575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300005186\|Ga0066676_10791907	Not Available	643	Open in IMG/M
3300005332\|Ga0066388_100002749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10979	Open in IMG/M
3300005332\|Ga0066388_100024283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5455	Open in IMG/M
3300005332\|Ga0066388_100024605	All Organisms → cellular organisms → Bacteria → Proteobacteria	5431	Open in IMG/M
3300005332\|Ga0066388_100076855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3683	Open in IMG/M
3300005332\|Ga0066388_100415500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1989	Open in IMG/M
3300005332\|Ga0066388_101149785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1320	Open in IMG/M
3300005440\|Ga0070705_100528326	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300005557\|Ga0066704_11000161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300005713\|Ga0066905_100887167	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300005713\|Ga0066905_102260427	Not Available	508	Open in IMG/M
3300005764\|Ga0066903_100054403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4919	Open in IMG/M
3300005764\|Ga0066903_105329089	Not Available	679	Open in IMG/M
3300005833\|Ga0074472_10733804	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005937\|Ga0081455_10087801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2529	Open in IMG/M
3300005983\|Ga0081540_1017788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4388	Open in IMG/M
3300006178\|Ga0075367_10972062	Not Available	542	Open in IMG/M
3300006237\|Ga0097621_100488127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1114	Open in IMG/M
3300006578\|Ga0074059_12159080	Not Available	714	Open in IMG/M
3300006796\|Ga0066665_11353951	Not Available	549	Open in IMG/M
3300006853\|Ga0075420_101267706	Not Available	633	Open in IMG/M
3300006854\|Ga0075425_101518874	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300006854\|Ga0075425_101686968	Not Available	713	Open in IMG/M
3300006953\|Ga0074063_13288174	Not Available	535	Open in IMG/M
3300006954\|Ga0079219_11843916	Not Available	568	Open in IMG/M
3300007255\|Ga0099791_10548520	Not Available	563	Open in IMG/M
3300009012\|Ga0066710_102099292	Not Available	831	Open in IMG/M
3300009090\|Ga0099827_10497984	Not Available	1047	Open in IMG/M
3300009176\|Ga0105242_10172450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1902	Open in IMG/M
3300009792\|Ga0126374_10390287	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300010046\|Ga0126384_10084389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2298	Open in IMG/M
3300010046\|Ga0126384_10621146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	948	Open in IMG/M
3300010047\|Ga0126382_10036326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2759	Open in IMG/M
3300010047\|Ga0126382_10081746	All Organisms → cellular organisms → Bacteria → Proteobacteria	2023	Open in IMG/M
3300010159\|Ga0099796_10102463	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300010358\|Ga0126370_10189611	Not Available	1542	Open in IMG/M
3300010358\|Ga0126370_11033979	Not Available	752	Open in IMG/M
3300010359\|Ga0126376_10708888	Not Available	969	Open in IMG/M
3300010359\|Ga0126376_11188259	Not Available	777	Open in IMG/M
3300010360\|Ga0126372_10077736	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300010360\|Ga0126372_10968621	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300010360\|Ga0126372_11928391	Not Available	636	Open in IMG/M
3300010360\|Ga0126372_12126473	Not Available	609	Open in IMG/M
3300010360\|Ga0126372_12432255	Not Available	574	Open in IMG/M
3300010362\|Ga0126377_10330697	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300010362\|Ga0126377_11450763	Not Available	759	Open in IMG/M
3300010362\|Ga0126377_12533867	Not Available	588	Open in IMG/M
3300010362\|Ga0126377_12739283	Not Available	568	Open in IMG/M
3300010362\|Ga0126377_12824119	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300010362\|Ga0126377_12979561	Not Available	546	Open in IMG/M
3300010397\|Ga0134124_10013769	All Organisms → cellular organisms → Bacteria	6554	Open in IMG/M
3300010398\|Ga0126383_10812362	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300010400\|Ga0134122_10886961	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012207\|Ga0137381_10482845	Not Available	1081	Open in IMG/M
3300012208\|Ga0137376_11071713	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300012209\|Ga0137379_10069506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3388	Open in IMG/M
3300012211\|Ga0137377_11202722	Not Available	688	Open in IMG/M
3300012212\|Ga0150985_118066909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1157	Open in IMG/M
3300012359\|Ga0137385_10678807	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300012360\|Ga0137375_10080087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3408	Open in IMG/M
3300012922\|Ga0137394_10085797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2639	Open in IMG/M
3300012924\|Ga0137413_10049691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2425	Open in IMG/M
3300012925\|Ga0137419_10605585	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300012927\|Ga0137416_10841900	Not Available	813	Open in IMG/M
3300012929\|Ga0137404_10978041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	774	Open in IMG/M
3300012930\|Ga0137407_10507440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	1126	Open in IMG/M
3300012930\|Ga0137407_11600987	Not Available	620	Open in IMG/M
3300012948\|Ga0126375_10507336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	901	Open in IMG/M
3300012971\|Ga0126369_10230847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1807	Open in IMG/M
3300012971\|Ga0126369_12718889	Not Available	579	Open in IMG/M
3300015241\|Ga0137418_10149404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2060	Open in IMG/M
3300015242\|Ga0137412_10963273	Not Available	614	Open in IMG/M
3300017947\|Ga0187785_10373439	Not Available	678	Open in IMG/M
3300018028\|Ga0184608_10050706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1633	Open in IMG/M
3300018076\|Ga0184609_10125985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1167	Open in IMG/M
3300018431\|Ga0066655_10856902	Not Available	619	Open in IMG/M
3300019883\|Ga0193725_1095856	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300019886\|Ga0193727_1179634	Not Available	545	Open in IMG/M
3300020170\|Ga0179594_10149246	Not Available	864	Open in IMG/M
3300021560\|Ga0126371_13253691	Not Available	549	Open in IMG/M
3300022534\|Ga0224452_1107336	Not Available	855	Open in IMG/M
3300022756\|Ga0222622_10257747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1184	Open in IMG/M
3300022756\|Ga0222622_10822196	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300026067\|Ga0207678_11793166	Not Available	537	Open in IMG/M
3300027735\|Ga0209261_10000657	All Organisms → cellular organisms → Bacteria → Proteobacteria	9280	Open in IMG/M
3300027903\|Ga0209488_10002633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14673	Open in IMG/M
3300027907\|Ga0207428_10047562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3444	Open in IMG/M
3300028711\|Ga0307293_10064127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1151	Open in IMG/M
3300028719\|Ga0307301_10146650	Not Available	759	Open in IMG/M
3300028796\|Ga0307287_10414402	Not Available	507	Open in IMG/M
3300028814\|Ga0307302_10074404	Not Available	1604	Open in IMG/M
3300031152\|Ga0307501_10170382	Not Available	604	Open in IMG/M
3300031184\|Ga0307499_10028371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1256	Open in IMG/M
3300031184\|Ga0307499_10029410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1238	Open in IMG/M
3300031198\|Ga0307500_10135077	Not Available	692	Open in IMG/M
3300031226\|Ga0307497_10744802	Not Available	510	Open in IMG/M
3300031720\|Ga0307469_10119893	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300031740\|Ga0307468_100468361	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300032174\|Ga0307470_10950360	Not Available	679	Open in IMG/M
3300032180\|Ga0307471_100073251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2968	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.32%
Host-Associated	Host-Associated	10.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.52%
Plants	Host-Associated → Plants	10.68%
Aquatic	Environmental → Aquatic	6.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.52%
Sediment	Environmental → Aquatic → Sediment	5.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.91%
Roots	Host-Associated → Plants → Roots	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.96%
Loam	Environmental → Terrestrial → Soil → Loam	13.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.94%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.97%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.97%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209764224	3300002568	Soil	MRARLMIFVALMLGLTTFGLRALPAQAATAAGQRVTFPGCVFTGTPDTCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCLN*
Ga0066395_103639742	3300004633	Tropical Forest Soil	MCARVMVFAALAQVALMPGLMALPTQAASAAGQRVAFSGCAFAGTPDMCLMIKSPDGTLYNISALVPRPRALDRVIRVRGTVTDKVSVCTQGIVLDRIRWSRTRQRCPN*
Ga0066395_104115751	3300004633	Tropical Forest Soil	MRAWLIALAVGVVALGLVVLPMQAAPNAGQRVTFSGCVVTGPPDTCLMMKSPDGTLYNVNAITPRPRALDRVIRVRGTITDKPSACNQGIVLDRIRWSRTRQHCPN*
Ga0066676_107919071	3300005186	Soil	MRAWLIATAVGVVALGLVALPMQAAPNAGQRVSFSGCVVSGTPNACLMIKSPDGTLYNVNAITPRPRALDRVIRVRGTITDKASACDQGIVLDRIRWSRTRQHCP
Ga0066388_1000027498	3300005332	Tropical Forest Soil	MRARLMMFVALMLGLMALPAQAASAAGQRVTFSGCIFIGTPDTCLMVKSPDGTLYNVTALNPRPRALDRVIRVRGTVTDKASVCGQGIVLDRIRWSRTRQRCPS*
Ga0066388_1000242834	3300005332	Tropical Forest Soil	MRTIAMALGLGVLGLVALGLVALGSATLVVLPAQAATAVGQRVTFSGCVIMGSPDTCLMIKSPDGTLYNVNAITPRPRALDRVIRVRGTVTDKASVCNQGIVLDRIRWSRTRQHCPN*
Ga0066388_1000246055	3300005332	Tropical Forest Soil	MRAWLIAMAVGLVALGLVALPMQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0066388_1000768555	3300005332	Tropical Forest Soil	MRARLMVFAALTQMTLMLGSAALPAQAASATGQRVAFSGCAFAGTPDMCLMIKSPDGTLYNITALNPRPRALDRVIRVRGTVTDKPSACTQGIALDRIRWSRTRQRCPN*
Ga0066388_1004155001	3300005332	Tropical Forest Soil	MRAWLIALAVGVVALGLVVLPMQAAPNAGQRVSFSGCVVSGTPNACLMIKSPDGIVYNVNAITPRPRALDRVIRVRGTITDKASVCDQGIVLDRIRWSRTRQHCPSG*
Ga0066388_1011497853	3300005332	Tropical Forest Soil	MRARLTIFVALMLELIALPAQAATAAGQRVSFLGCAFTGTPDMCLMIKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0070705_1005283261	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRARLMVLVALMLVAFMLGLTALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCQN*
Ga0066704_110001611	3300005557	Soil	TALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0066905_1008871672	3300005713	Tropical Forest Soil	LGLVVLGLVVLGLVVLGPATLGVLPAQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0066905_1022604271	3300005713	Tropical Forest Soil	MRAIAMALGLVALVSVTLEPVALGQVRLGQVAQAATAVGQRVTFSGCVFAGTPDACLMIKSPEGTLYNVNAITPRPRALDRVIRVRGTITDKASVCNQGIVLDRIRWSRTRQHCPS
Ga0066903_1000544035	3300005764	Tropical Forest Soil	MCARVMVFAALAQVALMPGLMALPAQAASAAGQRVAFSGCAFAGTPDMCLMIKSPDGTLYNISALVPRPRALDRVIRVRGTVTDKVSVCTQGIVLDRIRWSRTRQRCPN*
Ga0066903_1053290892	3300005764	Tropical Forest Soil	MRMIAMALGLGVLGLVALGLVALGSATLVVLPAQAATAVGQRVTFSGCVFTGSPDTCLMIKSPDGTLYNVNAITPRPRALDRVIRVRGTVTDKASVCNQGIVLDRIRWSRTRQH
Ga0074472_107338042	3300005833	Sediment (Intertidal)	MRAWLIAAALALLAVPAQAEPKTGQRVAISGCAFVGTPATCLIIKGPDGATYNISALNPRPRVLDRVIRVRGTVTDKVSICNQGIVLDRIRWSRTRQRCPN*
Ga0081455_100878013	3300005937	Tabebuia Heterophylla Rhizosphere	MRAIAMALGLVALGLVVLGPATLGLLPVQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0081540_10177884	3300005983	Tabebuia Heterophylla Rhizosphere	MRARLMVLVALMLGLTALPAQAATAAGQRVTFSGCVFVGTPDTCLVIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0075367_109720621	3300006178	Populus Endosphere	MRALLIVLVVLMLGLLALPAQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0097621_1004881273	3300006237	Miscanthus Rhizosphere	LMLVAFMLGLTALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCQN*
Ga0074059_121590802	3300006578	Soil	MRARLVVLVALVLVAFVLGLTALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLD
Ga0066665_113539511	3300006796	Soil	GLVALPMQAAPNIGQRVTFSGCIFTGAPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0075420_1012677061	3300006853	Populus Rhizosphere	MCAWRTVLVALVLGLTGLPAQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDR
Ga0075425_1015188742	3300006854	Populus Rhizosphere	MRARLMMFVALMLGLTIFGLRALPAQAATAAGQRVTFSGCVFTGTPDTCLMIKSPDGTLYNISALNPRPRAFDRIIRVRGTLTDKASVCNQGIVLDRIRWSRTRQRCPN*
Ga0075425_1016869682	3300006854	Populus Rhizosphere	MRVKLVMLVALVLGLTALPAQAATAAGQRVTFFGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0074063_132881741	3300006953	Soil	MRARLVVLVAFVLGLTALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCQN*
Ga0079219_118439161	3300006954	Agricultural Soil	MRARLMMFVALIELTALPAQAATAVGQRVTFSGCVFTGTPDTCLMIKSPDGTLYNITALNPRPRALDRVIRVRGTVTDKVSVCNQ
Ga0099791_105485201	3300007255	Vadose Zone Soil	MRTRLVVFVALMLGLTALPAQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN*
Ga0066710_1020992921	3300009012	Grasslands Soil	MRAWLIAMAVGLVALGLVALPMQAAPNIGQRVTFSGCIFTGAPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN
Ga0099827_104979841	3300009090	Vadose Zone Soil	MLARLMVFVALMGLTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRAFDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQR
Ga0105242_101724503	3300009176	Miscanthus Rhizosphere	MVLVALMLVAFMLGLTALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVL
Ga0126374_103902872	3300009792	Tropical Forest Soil	MRAWLIAIAVGLVALGLVALPMQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0126384_100843892	3300010046	Tropical Forest Soil	MRARLTIFVALMLELIALPAQAATAAGQRVSFLGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCDQGIVLERIRWSRTRQRCPN*
Ga0126384_106211462	3300010046	Tropical Forest Soil	MMFVALMLGLMALPAQAASAAGQRVTFSGCIFIGTPDTCLMVKSPDGTLYNVTALNPRPRALDRVIRVRGTVTDKASVCGQGIVLDRIRWSRTRQRCPS*
Ga0126382_100363262	3300010047	Tropical Forest Soil	MRARLTIFVALMLELIALPAQAATAAGQRVSFLGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKVSVCDQGIALERIRWSRTRQRCPN*
Ga0126382_100817463	3300010047	Tropical Forest Soil	IRARRAAMRAWLIAMAVGLVALGLVALPMQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0099796_101024633	3300010159	Vadose Zone Soil	LMLGATALPAQAAAAAGQRVTFSGCVFTGTPDVCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCSQGIVLDRIRWSRTRQRCLN*
Ga0126370_101896113	3300010358	Tropical Forest Soil	MRAWLIAMALGLVALGLVVLPMQAAPNAGQRVTFSGCVVTGPPDTCLMMKSPDGTLYNVNAITPRPRALDRVIRVRGTITDKPSACSQGIVLDRIRWSRTRQHCPN*
Ga0126370_110339791	3300010358	Tropical Forest Soil	LGSATLVVLPAQAATAVGQRVTFSGCVFTGSPDTCLMIKSPDGTLYNVNAITPRPRALDRVIRVRGTVTDKASVCNQGIVLDRIRWSRTRQHCPN*
Ga0126376_107088881	3300010359	Tropical Forest Soil	MRARLMVFAALTQMTLMLGSAALPAQAASATGQRVAFSGCAFAGTPDMCLMIKSPDGTLYNITALNPRPRALDRVIRVRGTVTDKPSACTQGIALDRIR
Ga0126376_111882592	3300010359	Tropical Forest Soil	MRARLMMFVALMLGLTIFGLRALPAQAATAAGQRVTFSGCVFTGTPDTCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKTSACNQG
Ga0126372_100777362	3300010360	Tropical Forest Soil	MEGTGMRARLMMFVALMLGLMALPAQAASAAGQRVTFSGCIFIGTPDTCLMVKSPDGTLYNVTALNPRPRALDRVIRVRGTVTDKASVCGQGIVLDRIRWSRTRQRCPS*
Ga0126372_109686212	3300010360	Tropical Forest Soil	MPGLMALPTQAASAAGQRVAFSGCAFAGTPDMCLMIKSPDGTLYNISALVPRPRALDRVIRVRGTVTDKVSVCTQGIVLDRIRWSRTRQRCPN*
Ga0126372_119283911	3300010360	Tropical Forest Soil	MRAWLIAMALGLVALGLVVLPMQAAPNAGQRVTFSGCMVTGPPDTCLMMKSPDGTLYNVNAITPRPRALDRVIRVRGTITDKPSACNQGIVLDRIRWSRTRQHCPN*
Ga0126372_121264732	3300010360	Tropical Forest Soil	MRAWPIAIGLGLVALGLVVLPMQAAPNMGQRVTFSGCVFTGTPDACLMIKSPDGTLYNVNTITPRPRALDRVIRVRGTVTDKASACNQAIVLDRIRWSRTRQHCPN*
Ga0126372_124322552	3300010360	Tropical Forest Soil	MLLVAFMLGLTALPAQAATAAGQRVTFSGCVFVGTPDTCLMIKSPDGTLYNISALNPRPRALDRVIRIRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0126377_103306972	3300010362	Tropical Forest Soil	MALGLVALGLVVLGPATLGVLPVQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0126377_114507632	3300010362	Tropical Forest Soil	MRARLMAVIALLLALTALPAQAATAVGQRVSFSGCVFTGTPDTCLLIKSPDGTLYNISALNPRPRALDRIIRIRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN*
Ga0126377_125338672	3300010362	Tropical Forest Soil	MGMRARLVLVALLGLTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNVSALIPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0126377_127392831	3300010362	Tropical Forest Soil	MALGLVALGLVVLGLVVLGPATLGVLPAQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0126377_128241192	3300010362	Tropical Forest Soil	LMALPAQAASAAGQRVAFSGCVFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSACTQGIALDRIRWSRTRQRCPN*
Ga0126377_129795611	3300010362	Tropical Forest Soil	MRARLTIFVALMLELIALPAQAATAAGQRVSFLGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKVSVCDQGIALERIRWSR
Ga0134124_100137696	3300010397	Terrestrial Soil	MVLVALMLVAFMLGLTALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCQN*
Ga0126383_108123622	3300010398	Tropical Forest Soil	MRAWLIAMALGLVALGLVALPMQAAPSAGQRVTFSGCVVTGPPDTCLMMKSPDGILYNVNAITPRPRALDRVIRVRGTITDKPSACNQGIVLDRIRWSRTRQHCPN*
Ga0134122_108869612	3300010400	Terrestrial Soil	TALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCQN*
Ga0137381_104828452	3300012207	Vadose Zone Soil	MLARLMMFVALLGLTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCSQGIVLDRI
Ga0137376_110717131	3300012208	Vadose Zone Soil	ERSGMLARLMMFVALMLGLMALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRAFDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0137379_100695062	3300012209	Vadose Zone Soil	MLPRLMMFVALMGLTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0137377_112027222	3300012211	Vadose Zone Soil	MLARLMMFVALLGLTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRAFDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0150985_1180669092	3300012212	Avena Fatua Rhizosphere	MIFVALMLGLTTFGLRALPAQAATAAGQRVTFPGCVFTGTPDTCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCLN*
Ga0137385_106788071	3300012359	Vadose Zone Soil	TALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRAFDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0137375_100800875	3300012360	Vadose Zone Soil	MRARLVVFVALMLGVTVLPAQAATAAGQRVTFSGCVFTGTPDVCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCSQGIVLDRIRWSRTRQRCLN*
Ga0137394_100857974	3300012922	Vadose Zone Soil	MRARLVVFVALMLGLTALPAQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN*
Ga0137413_100496913	3300012924	Vadose Zone Soil	MRARLVVFVALMLGVTALPAQAAAAAGQRVTFSGCVFTGTPDVCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCSQGIVLDRIRWSRTRQRCLN*
Ga0137419_106055852	3300012925	Vadose Zone Soil	MQFLEGAGMRARLVVFVALMLGLTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRAFDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN*
Ga0137416_108419001	3300012927	Vadose Zone Soil	MLARLMGFVALMGLTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRAFDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQHCPN*
Ga0137404_109780412	3300012929	Vadose Zone Soil	MRARLVVFVALMLGVTALPAQAATAAGQRVTFSGCVFTGTPDVCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCSQGIVLDRIRWSRTRQRCLN*
Ga0137407_105074402	3300012930	Vadose Zone Soil	MRAWLIAVAVGLVALGLVVLPMQAAPNIGQRVTFSGCVFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDKASVCTQAIVLDRIRWSRTRQHCPN*
Ga0137407_116009872	3300012930	Vadose Zone Soil	MRARLVVFVALMLGVTALPAQAAAAAGQRVTFSGCVFTGTPDVCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCSQGIVLDRIRWSRTRQRCPN*
Ga0126375_105073362	3300012948	Tropical Forest Soil	MRARLTIFVALMLELIALPAQAATAAGQRVSFLGCAFTGTPDMCLMMKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKVSVCDQGIVLERIRWSRTRQRCPN*
Ga0126369_102308471	3300012971	Tropical Forest Soil	MRAWLIAMALGLVALGLVVLPMQAAPNAGQRVTFSGCVVTGPPDTCLMMKSPDGTLYNVNAITPRPRALDRVIRVRGTITDKPSACNQGIVLDRIRWSRTRQHCPN*
Ga0126369_127188892	3300012971	Tropical Forest Soil	MIAMALGLGALGSVALGLVALGLVALGLVALGSATLVVLPAQAATAVGQRVTFSGCVFTGSPDTCLMIKSPDGTLYNVNAITPRPRALDRVIRVRGTVTDKASVCNQGIVLDRIRWSRTRQHCPN*
Ga0137418_101494043	3300015241	Vadose Zone Soil	MRARLVVFVALMLGVTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRAFDRIIRVRGTVTDKVSVCNQGIVLDRIGWSRTRQRCPN*
Ga0137412_109632732	3300015242	Vadose Zone Soil	MRTRLVVFVALMLGLTALPVQAATAAGQRVTFSGCAFTGTPDMCLMIRNPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN*
Ga0187785_103734391	3300017947	Tropical Peatland	MHARLMAVVALLLGLTALPAQAATAAGQRVSFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSACNQGIVLDRIRW
Ga0184608_100507062	3300018028	Groundwater Sediment	MRARLVVFVALMLGLTALPAQAATAAGQRVTFSGCAFTGTPDTCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN
Ga0184609_101259853	3300018076	Groundwater Sediment	MRARLVVFVALVLGLTALPAQAATAAGQRVTFSGCAFTGTPDMCLMIRSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQSIVLDRIRWSRTRQRCPN
Ga0066655_108569021	3300018431	Grasslands Soil	MRAWLIATAVGVVALGLVVLPMQAAPNAGQRVSFSGCVVSGTPNACLMIKSPDGTVYNVNTITPRPRALDRVIRVRGTITDKASACDQGI
Ga0193725_10958561	3300019883	Soil	AQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKTSVCNQGIVLDRIRWSRTRQRCPN
Ga0193727_11796341	3300019886	Soil	MRARLVVFVALMLGLTALPAQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN
Ga0179594_101492462	3300020170	Vadose Zone Soil	MLARLVMFVALIGLTALPAQAATAAGQRVTFSGCVFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN
Ga0126371_132536911	3300021560	Tropical Forest Soil	MRAWLIAMALGLVALGLVVLPMQAAPNAGQRVTFSGCVVTGPPDTCLMMKSPDGTLYNVNAITPRPRALDRVIRVRGTITDKPSACNQGIVLDRIRWSR
Ga0224452_11073362	3300022534	Groundwater Sediment	MRTRLVVFVALMLGLTALPVQAATAAGQRVTFSGCAFTGTPDMCLMIRSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQSIVLDRIRWSRTRQRCLN
Ga0222622_102577472	3300022756	Groundwater Sediment	MRARLMIFVALMLGLTIFGLRALPAQAATAAGQRVTFSGCVFTGTPDTCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCLN
Ga0222622_108221962	3300022756	Groundwater Sediment	VLPGQAAPNVGQRVTFSGCVFAGTPETCLMIKSPDGTLYNISALNPRPRSLERVIRVRGSVTDKVSTCNQGIVLDRIRWSRTRQHCPS
Ga0207678_117931662	3300026067	Corn Rhizosphere	LPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCQN
Ga0209261_100006571	3300027735	Wetland Sediment	MRAWLIARSLGLAFGMVALGMVALGMVTLPAQAAPNVGQRVTFSGCMFAGTPATCLMIKSPDGTVYNINALNPRPRALDRVIRVRGTVTDKVSIC
Ga0209488_1000263312	3300027903	Vadose Zone Soil	MRARLVVFVALMLGVTALPAQAAAAAGQRVTFSGCVFTGTPDVCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCSQGIVLDRIRWSRTRQRCLN
Ga0207428_100475624	3300027907	Populus Rhizosphere	MRALLIVLVVLMLGLLALPAQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN
Ga0307293_100641272	3300028711	Soil	MRTRLVVFVALMLGLTALPVQAATAAGQRVTFSGCAFTGTPDMCLMIRSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN
Ga0307301_101466502	3300028719	Soil	MRARLVVFVALMLGLTALPAQAATAAGQRVTFSGCAFTGTHDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQSIVLDRIRWSRTRQRCPN
Ga0307287_104144021	3300028796	Soil	MRARLVVFVALMLGLTALPAQAATATGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN
Ga0307302_100744041	3300028814	Soil	MRTRLVVFVALMLGLTALPAQAATAAGQRVTFSGCAFTGTPDMCLMIKSPDGTLYNISALNPRPRALDRIIRVRGTVTDKASVCNQGIVLDRIRWSRTRQRCPN
Ga0307501_101703821	3300031152	Soil	MRARLVVFVALMLGVTALPAQAATAAGQRVTFSGCVFTGTPDVCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKGSVCSQGIVLDRIRWSRTRQRCLN
Ga0307499_100283712	3300031184	Soil	MRARLVVLVALVLVAFVLGLTALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCQN
Ga0307499_100294102	3300031184	Soil	MRARLIMFVALMLGLTISGLEALPAQAATAAGQRVTFSGCVFTGTPDTCLMIKSPDGALYNISALNPRPRALDRIIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN
Ga0307500_101350771	3300031198	Soil	MRARLIMFVALMLGLTISGLEALPAQAATAAGQRVTFSGCVFTGTPDTCLMIKSPDGALYNISALNPRPRALDRIIRVRGTVTDKVSVCNQGIVLDRIRWS
Ga0307497_107448021	3300031226	Soil	MRARLMVVVALMLGLTALPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN
Ga0307469_101198932	3300031720	Hardwood Forest Soil	MRAWLIAMAVGLVALGLVALPMQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDRASVCTQAVVLDRIRWSRTRQHCPN
Ga0307468_1004683612	3300031740	Hardwood Forest Soil	RLMVFVALVIGLTVLPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRVRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN
Ga0307470_109503602	3300032174	Hardwood Forest Soil	MRARLMVFVALVLGLTVLPAQAATAAGQRVTFSGCAFAGTPDMCLMIKSPDGTLYNISALNPRPRALDRVIRIRGTVTDKVSVCNQGIVLDRIRWSRTRQRCPN
Ga0307471_1000732514	3300032180	Hardwood Forest Soil	MRAWLIAMAVGLVALGLVVLPMQAAPNIGQRVTFSGCIFTGTPDTCLMMKSPDGTLYNVNTITPRPRALDRVIRVRGTITDRASVCTQAVVLDRIRWSRTRQHCPN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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