Metagenome Family F099462

Basic Information
Family ID	F099462
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	69 residues
Representative Sequence	MNADTQIVYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAIHVAKTAIDNDRIR
Number of Associated Samples	93
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.55 %
% of genes near scaffold ends (potentially truncated)	20.39 %
% of genes from short scaffolds (< 2000 bps)	84.47 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Most Common Taxonomy
Group	Unclassified (58.252 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere (7.767 % of family members)
Environment Ontology (ENVO)	Unclassified (57.282 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.136 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.40% β-sheet: 32.99% Coil/Unstructured: 53.61%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.20.1.2: UEV domain	d3obsa1	3obs	0.65026
d.20.1.0: automated matches	d3fn1b_	3fn1	0.63646
d.20.1.1: UBC-related	d1y8xa1	1y8x	0.63232
c.74.1.1: AraD-like aldolase/epimerase	d1e48p_	1e48	0.63111
d.20.1.1: UBC-related	d1wzva1	1wzv	0.62431

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01627	Hpt	3.88
PF11752	DUF3309	2.91
PF07715	Plug	2.91
PF00313	CSD	2.91
PF07690	MFS_1	2.91
PF01841	Transglut_core	2.91
PF06210	DUF1003	1.94
PF01255	Prenyltransf	1.94
PF08238	Sel1	0.97
PF05193	Peptidase_M16_C	0.97
PF02566	OsmC	0.97
PF02586	SRAP	0.97
PF13360	PQQ_2	0.97
PF13581	HATPase_c_2	0.97
PF00248	Aldo_ket_red	0.97
PF01011	PQQ	0.97
PF05951	Peptidase_M15_2	0.97
PF01261	AP_endonuc_2	0.97
PF00593	TonB_dep_Rec	0.97
PF05036	SPOR	0.97
PF05099	TerB	0.97
PF00685	Sulfotransfer_1	0.97
PF02518	HATPase_c	0.97
PF13378	MR_MLE_C	0.97
PF03466	LysR_substrate	0.97
PF01814	Hemerythrin	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	1.94
COG4420	Uncharacterized membrane protein	Function unknown [S]	1.94
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.97
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.97
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.97
COG3108	Uncharacterized conserved protein YcbK, DUF882 family	Function unknown [S]	0.97
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
All Organisms	root	All Organisms	41.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
cellular organisms	root	All Organisms → cellular organisms	41.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.01 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.21 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.71 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.97 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.97 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.97 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.71 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.97 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.97 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.97 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.71 %
Telmatospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum	0.97 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.97 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.97 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.71 %
Telmatospirillum siberiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → Telmatospirillum siberiense	0.97 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.97 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.97 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.97 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105323210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → Telmatospirillum siberiense	1592	Open in IMG/M
3300000956\|JGI10216J12902_122730622	Not Available	573	Open in IMG/M
3300002772\|JGI25164J39214_1024909	Not Available	511	Open in IMG/M
3300003322\|rootL2_10369519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1211	Open in IMG/M
3300004114\|Ga0062593_101283264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300004114\|Ga0062593_101735810	Not Available	683	Open in IMG/M
3300005327\|Ga0070658_10690767	Not Available	886	Open in IMG/M
3300005329\|Ga0070683_101530242	Not Available	641	Open in IMG/M
3300005330\|Ga0070690_101354748	Not Available	571	Open in IMG/M
3300005333\|Ga0070677_10574097	Not Available	621	Open in IMG/M
3300005334\|Ga0068869_100678946	Not Available	877	Open in IMG/M
3300005338\|Ga0068868_101107067	Not Available	729	Open in IMG/M
3300005339\|Ga0070660_101194543	Not Available	645	Open in IMG/M
3300005340\|Ga0070689_101554503	Not Available	600	Open in IMG/M
3300005353\|Ga0070669_101669826	Not Available	555	Open in IMG/M
3300005356\|Ga0070674_101140549	Not Available	690	Open in IMG/M
3300005356\|Ga0070674_101772032	Not Available	559	Open in IMG/M
3300005434\|Ga0070709_10499497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	924	Open in IMG/M
3300005435\|Ga0070714_102207850	Not Available	536	Open in IMG/M
3300005439\|Ga0070711_100936173	Not Available	741	Open in IMG/M
3300005456\|Ga0070678_100993022	Not Available	771	Open in IMG/M
3300005456\|Ga0070678_102144887	Not Available	530	Open in IMG/M
3300005457\|Ga0070662_100054386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2901	Open in IMG/M
3300005466\|Ga0070685_10845763	Not Available	677	Open in IMG/M
3300005511\|Ga0077121_10221850	Not Available	1486	Open in IMG/M
3300005529\|Ga0070741_10994874	Not Available	719	Open in IMG/M
3300005545\|Ga0070695_101095695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300005546\|Ga0070696_100861374	Not Available	749	Open in IMG/M
3300005548\|Ga0070665_100343052	Not Available	1499	Open in IMG/M
3300005563\|Ga0068855_100211677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2178	Open in IMG/M
3300005563\|Ga0068855_102025489	Not Available	581	Open in IMG/M
3300005840\|Ga0068870_10737843	Not Available	683	Open in IMG/M
3300005842\|Ga0068858_101695077	Not Available	624	Open in IMG/M
3300006237\|Ga0097621_100996937	Not Available	783	Open in IMG/M
3300006881\|Ga0068865_101479018	Not Available	608	Open in IMG/M
3300009093\|Ga0105240_10311169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1799	Open in IMG/M
3300009093\|Ga0105240_10874173	Not Available	969	Open in IMG/M
3300009098\|Ga0105245_10195598	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300009148\|Ga0105243_10472670	Not Available	1181	Open in IMG/M
3300009159\|Ga0114978_10184810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300009551\|Ga0105238_13000231	Not Available	507	Open in IMG/M
3300009840\|Ga0126313_11443763	Not Available	571	Open in IMG/M
3300010375\|Ga0105239_11429191	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300010399\|Ga0134127_12887207	Not Available	560	Open in IMG/M
3300010403\|Ga0134123_11128226	Not Available	809	Open in IMG/M
3300010403\|Ga0134123_13292536	Not Available	521	Open in IMG/M
3300011997\|Ga0120162_1046535	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300012003\|Ga0120163_1002606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9312	Open in IMG/M
3300012212\|Ga0150985_101386426	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012469\|Ga0150984_115521968	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300012942\|Ga0164242_10004117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16383	Open in IMG/M
3300012956\|Ga0154020_10258256	Not Available	1563	Open in IMG/M
3300013100\|Ga0157373_10158374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1593	Open in IMG/M
3300013297\|Ga0157378_10560114	Not Available	1149	Open in IMG/M
3300013306\|Ga0163162_10140569	Not Available	2527	Open in IMG/M
3300014326\|Ga0157380_11914934	Not Available	654	Open in IMG/M
3300014501\|Ga0182024_10723474	All Organisms → cellular organisms → Bacteria → Proteobacteria	1225	Open in IMG/M
3300014745\|Ga0157377_11175586	Not Available	592	Open in IMG/M
3300014968\|Ga0157379_10006678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9962	Open in IMG/M
3300014968\|Ga0157379_10072932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3072	Open in IMG/M
3300015189\|Ga0167667_1011039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2701	Open in IMG/M
3300015200\|Ga0173480_10274354	Not Available	930	Open in IMG/M
3300015374\|Ga0132255_103326860	Not Available	685	Open in IMG/M
3300018476\|Ga0190274_13527823	Not Available	528	Open in IMG/M
3300019787\|Ga0182031_1541689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1955	Open in IMG/M
3300019874\|Ga0193744_1024470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1132	Open in IMG/M
3300020021\|Ga0193726_1231225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300020027\|Ga0193752_1043042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	2000	Open in IMG/M
3300020034\|Ga0193753_10327578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	646	Open in IMG/M
3300021088\|Ga0210404_10070072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1702	Open in IMG/M
3300021519\|Ga0194048_10034450	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300021559\|Ga0210409_11627480	Not Available	522	Open in IMG/M
3300025899\|Ga0207642_10510358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	737	Open in IMG/M
3300025901\|Ga0207688_10758297	Not Available	614	Open in IMG/M
3300025903\|Ga0207680_10100762	Not Available	1855	Open in IMG/M
3300025909\|Ga0207705_10168801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1647	Open in IMG/M
3300025911\|Ga0207654_10375208	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300025913\|Ga0207695_10522717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1068	Open in IMG/M
3300025914\|Ga0207671_10447570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1029	Open in IMG/M
3300025919\|Ga0207657_10767213	Not Available	747	Open in IMG/M
3300025927\|Ga0207687_10121474	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300025933\|Ga0207706_10333267	Not Available	1320	Open in IMG/M
3300025938\|Ga0207704_11260888	Not Available	631	Open in IMG/M
3300025941\|Ga0207711_11891028	Not Available	540	Open in IMG/M
3300025949\|Ga0207667_11456066	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300025961\|Ga0207712_11937922	Not Available	527	Open in IMG/M
3300026023\|Ga0207677_10118595	Not Available	1986	Open in IMG/M
3300026023\|Ga0207677_10372495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1203	Open in IMG/M
3300026121\|Ga0207683_11338311	Not Available	663	Open in IMG/M
3300027736\|Ga0209190_1001263	All Organisms → cellular organisms → Bacteria → Proteobacteria	17732	Open in IMG/M
3300028379\|Ga0268266_10028443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4751	Open in IMG/M
3300031232\|Ga0302323_102350085	Not Available	608	Open in IMG/M
3300031456\|Ga0307513_10218409	Not Available	1730	Open in IMG/M
3300031711\|Ga0265314_10101018	All Organisms → cellular organisms → Bacteria	1854	Open in IMG/M
3300031730\|Ga0307516_10027256	Not Available	5794	Open in IMG/M
3300031759\|Ga0316219_1222902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300032174\|Ga0307470_10021007	All Organisms → cellular organisms → Bacteria → Proteobacteria	2939	Open in IMG/M
3300032174\|Ga0307470_11338563	Not Available	588	Open in IMG/M
3300032753\|Ga0316224_1152093	Not Available	808	Open in IMG/M
3300032893\|Ga0335069_12634638	Not Available	518	Open in IMG/M
3300032897\|Ga0335071_12135676	Not Available	503	Open in IMG/M
3300033475\|Ga0310811_10020827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	8656	Open in IMG/M
3300033475\|Ga0310811_10163654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.31%
Environmental	Environmental	42.72%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.31%
Terrestrial	Environmental → Terrestrial	37.86%
Aquatic	Environmental → Aquatic	4.85%
Wastewater	Engineered → Wastewater	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.39%
Freshwater	Environmental → Aquatic → Freshwater	4.85%
Roots	Host-Associated → Plants → Roots	2.91%
Peat	Environmental → Terrestrial → Peat	0.97%
Rhizome	Host-Associated → Plants → Rhizome	0.97%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.56%
Loam	Environmental → Terrestrial → Soil → Loam	8.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.88%
Lake	Environmental → Aquatic → Freshwater → Lake	2.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.91%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.97%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.91%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.97%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	7.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	1.94%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.94%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.94%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.97%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.97%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.97%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.97%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.97%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002772	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS	Host-Associated	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005511	Combined assembly of arab plate scrape MF_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011997	Permafrost microbial communities from Nunavut, Canada - A15_80cm_18M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012942	Miracle-Growth compost microbial communities from Emeryville, California, USA - Original compost - Miracle growth compost (MG)	Environmental	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032753	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1053232102	3300000364	Soil	MSADTQVAHHEYLITVTEEAGRFTARVTREGGMIEHNGHVSEGWKAASCASLDRAVHVAKNAIDTDAIR*
JGI10216J12902_1227306221	3300000956	Soil	MGADTQLGYHEYLITVTEEAGRFTARVTRPGGLIEHDGNVSEGWRAASCASQDRAILVAKTAIDTDRVR*
JGI25164J39214_10249092	3300002772	Arabidopsis Rhizosphere	MGADTQTTYLEYVITIAETGGRFTARVSRPGFLIEHDGRSSEIWAAASCGSLDRAIQTAKAAIDNDHIR*
rootL2_103695192	3300003322	Sugarcane Root And Bulk Soil	MGAETQTIYLEYVITVTESDGRFTPRVTRPGKSIEHDGRVSEAWAAASCGSLERAIQTARAAIDNDRIR*
Ga0062593_1012832642	3300004114	Soil	MGAETQTPYLEYVITVTEADGRFTPRVTRPGGVIEHDGRVSQAWAAASCASLERAIQTARTAIDNDRIR*
Ga0062593_1017358101	3300004114	Soil	KSFMNADTQIVYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAIHVAKTAIDNDHIR*
Ga0070658_106907671	3300005327	Corn Rhizosphere	MSADTRVIYLEYTITVTEEAGRFTSRVTREGGLIEHDGQQSEGWKAASCASLDRAILVAKTAIDNDRIR*
Ga0070683_1015302421	3300005329	Corn Rhizosphere	MSADTQITYLEYMVTVAEAGGRFTARVSRPGFLIEHDGRSSEVWAAASCGSLDRAIQTAKAAIDNDRIR*
Ga0070690_1013547481	3300005330	Switchgrass Rhizosphere	MSADTQIIYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAVHVAKTAIDNDHVR*
Ga0070677_105740972	3300005333	Miscanthus Rhizosphere	VITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAIHVAKTAIDNDHIR*
Ga0068869_1006789463	3300005334	Miscanthus Rhizosphere	MSADTQIIYLEYVITVTEEAGRFTSRVTREGGLIEHNGHLSEGWKAASCASLDRAVRVAKTAIDNDHVR*
Ga0068868_1011070672	3300005338	Miscanthus Rhizosphere	MSADTQMIYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAVHVAK
Ga0070660_1011945431	3300005339	Corn Rhizosphere	QVAYLEYMITVMEDGGRFTAHVRREGGLIEHDGQLSEVWAGASCASFDRAVFVAKTAIDNDRIR*
Ga0070689_1015545031	3300005340	Switchgrass Rhizosphere	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHDGNVSEGWKAASCASLDRAVHVAKTAIDSDHVR*
Ga0070669_1016698262	3300005353	Switchgrass Rhizosphere	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHDGNVSEGWKAASCASLDRAVHVAKTAIDTDKVR*
Ga0070674_1011405491	3300005356	Miscanthus Rhizosphere	MSADTRIPYHEYIITVTEEGGRFTPRVSREGALIEHDGHVSEVWAAASCASLDRAILVARTAIDTDKVR*
Ga0070674_1017720321	3300005356	Miscanthus Rhizosphere	MSADTKIAFHEYIITVTEEAGRFTARVTREGGLIEHDGHVSEGWSAASCASLHRALLVAKTAIDTDKIR*
Ga0070709_104994973	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTSETQVVYLEYKITVTEDGGRFTARVRREGGLIEHEGRVSEVWAGASCASLDRAVHVAKTAIDSDRIR*
Ga0070714_1022078502	3300005435	Agricultural Soil	TSEYQGYTIDVTEVAGRFTPRVSRAGQMIEHDGKSSEIWAAASCGSMDRALEVAHTAIDSGRIK*
Ga0070711_1009361732	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGVETQTTYLEYVISVTEADGRFTPRVTRPGGFIEHDGRVSEAWAAASCGSLDRAILTARNAI
Ga0070678_1009930221	3300005456	Miscanthus Rhizosphere	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHNGHVSEGWKAASCASLDRAVHVAKTAIDTDAIR*
Ga0070678_1021448871	3300005456	Miscanthus Rhizosphere	MSADTQLGYHGYLITVTEEAGRFTARVTRPGGLIEHDGNVSEGWRAASCASQDRAILVAKTAIDTDRVR*
Ga0070662_1000543863	3300005457	Corn Rhizosphere	MNADTQIVYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAIHVAKTAIDNDHIR*
Ga0070685_108457632	3300005466	Switchgrass Rhizosphere	MSAETRTEYLEYIITTTEEAGRFTSRVTREGAMIEHDGHVSEGWRTASCASLDRAIHVAKTAIDTDRIR*
Ga0077121_102218503	3300005511	Arabidopsis Rhizosphere	MSAQTQIVYLEYLITVIEEAGRFTSRVTRDGGLIEHDGHFSEGWKTASCASLNRAVQVAKTAIDNDQIR*
Ga0070741_109948741	3300005529	Surface Soil	MGAETQTNYLEYVITVAETDGRFTARVTRPGFLIEHDGRSSEIWAAASCGSRDRAVQTAKAAIDNDRIR*
Ga0070695_1010956952	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AFMGAETQTPYLEYVITVTEADGRFTPRVTRPGGVIEHDGRVSQAWAAASCASLERAIQTARTAIDNDRIR*
Ga0070696_1008613741	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MGAETQTPYLEYVITVTEADGRFTPRVTRPGGVIEHDGRVSQAWAAASCASLERAIQTARTAIDNDRI
Ga0070665_1003430523	3300005548	Switchgrass Rhizosphere	MSADTKIAFHEYIITVTEEAGRFTARVTREGGLIEHDGHVSEGWSAASCASLDRALLVAKTAIDTDKIR*
Ga0068855_1002116773	3300005563	Corn Rhizosphere	MHEVSSSRTAETQVAYLEYMITVMEDGGRFTAHVRREGGLIEHDGQLSEVWAGASCASFDRAVFVAKTAIDNDRIR*
Ga0068855_1020254892	3300005563	Corn Rhizosphere	LEDPRQESLMSADTQIIYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAVHVAKTAIDNDHVR*
Ga0068870_107378432	3300005840	Miscanthus Rhizosphere	MSADTQLGYHEYLITVTEEAGRFTARVTRPGGLIEHDGNVSEGWRAASCASQDRAILVAKTAIDTDRVR*
Ga0068858_1016950771	3300005842	Switchgrass Rhizosphere	MSAETRTEYLEYIITTTEEAGRFTSRVTREGAMIEHDGHVSEGWRTASCASLDRAVHVAKTAIDTDRIR*
Ga0097621_1009969371	3300006237	Miscanthus Rhizosphere	MGVETQTTYLEYVISVTEADGRFTPRVTRPGGFIEHDGRVSEAWAAASCGSLDRAILTARNAIDNDRIR*
Ga0068865_1014790181	3300006881	Miscanthus Rhizosphere	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHDGNVSEGWKAASCASLDRAVHVAKTAID
Ga0105240_103111694	3300009093	Corn Rhizosphere	MITVMEDGGRFTAHVRREGGLIEHDGQLSEVWAGASCASFDRAVFVAKTAIDNDRIR*
Ga0105240_108741732	3300009093	Corn Rhizosphere	MGVDTQTTYLEYVITVSEANGRFTPRVTRPGGMIEHDGRVSEAWAAASCGSPERAIQTARAAIDNDRIR*
Ga0105245_101955982	3300009098	Miscanthus Rhizosphere	MGAVTQTSYLEYTITVTEDAGRFTPRVTREGGMIEHDGHTSEIWVASSCASLDRAILVARTAIDSDRIR*
Ga0105243_104726701	3300009148	Miscanthus Rhizosphere	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHNGHVSEGWKAASCASLDRAVHVAKTAIDSDAIR*
Ga0114978_101848103	3300009159	Freshwater Lake	VNTTKSEYFEYTITVTEESGRFTARVTRAGAMIEHDGNVSEIWAAPSSGSLDRAVQVARAAIDSDRIR*
Ga0105238_130002311	3300009551	Corn Rhizosphere	SLMSADTQIIYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAVHVAKTAIDNDHVR*
Ga0126313_114437631	3300009840	Serpentine Soil	MSADTQIVYLEYIITVTEEAGRFTSRVTREGGMIEHDGHLSEGWKAASCASLDRAVRVAKTAIDNDHIR*
Ga0105239_114291912	3300010375	Corn Rhizosphere	ITVTEEAGRFTARVTREGGLIEHNGNVSEGWKAASCASLDRAVHVAKTAIDTDTIR*
Ga0134127_128872072	3300010399	Terrestrial Soil	MGAETQTIYLEYVITVTQADGRFTPRVTRPGELIEHDGHVSEVWAAASCGTLERAINTAKAAIDNDRIR*
Ga0134123_111282262	3300010403	Terrestrial Soil	MGAETQTPYLEYVITVTEADGRFTPRVPRPGGVIEHDGRVSQAWAAASCASLERAIQTARTAIDNDRIR*
Ga0134123_132925361	3300010403	Terrestrial Soil	RDRESFMSADTRISYFEYIITVTEEAGRFTSRVTREGGLIEHDGHVSEGWKTASCASLDRAVQVAKTAIDSDHVR*
Ga0120162_10465351	3300011997	Permafrost	MGDRMSADTKVDYLEYVITVSQDGGRFTARVTREGGMIEHDGHVSQVWAAASCASLDRAVLIAKTAIDSDRIR*
Ga0120163_100260613	3300012003	Permafrost	MGDRMSADTKVDYLEYVITVSQDGGRFTARVTREGGMIEHDGHVSQVWAAASCASLDRAVLIAKTAIDSDRIREISDRGRQFASGQH*
Ga0150985_1013864261	3300012212	Avena Fatua Rhizosphere	SLRRAPAGSMCMSATTTYLEYTITVTEEGGRFTPRVRREGGLIEHDGNVSEVWSAASCNSPERAVLVAKTAIDTDRIR*
Ga0150984_1155219681	3300012469	Avena Fatua Rhizosphere	MCMSATTTYLEYTITVTEEGGRFTPRVRREGGLIEHDGNVSEVWSAASCNSPERAVLVAKTAIDTDRIR*
Ga0164242_1000411713	3300012942	Compost	MSAERQTTYLEYVITVTEAGGRFTPRVTKPGGLIEHEGHLSEVWAAASCGSLDRAIQMARSAIDNDHIR*
Ga0154020_102582562	3300012956	Active Sludge	MSADTQLGYHEYLITVTEEAGRFTARVTRPGGLIEHDGNVSEGWKAASCASQDRAILVAKTAIDTDRVR*
Ga0157373_101583742	3300013100	Corn Rhizosphere	YLEYVITVTEADGRFTPRVTRPGGVIEHDGRVSQAWAAASCASLERAIQTARTAIDNDRIR*
Ga0157378_105601143	3300013297	Miscanthus Rhizosphere	IWVWKVRDRESFMSADTRISYFEYIITVTEEAGRFTSRVTREGGLIEHDGHVSEGWKTASCASLDRAVHVAKTAIDSDHVR*
Ga0163162_101405691	3300013306	Switchgrass Rhizosphere	YLEYIITTTEEAGRFTSRVTREGAMIEHDGHVSEGWRTASCASLDRAIHVAKTAIDTDRIR*
Ga0157380_119149341	3300014326	Switchgrass Rhizosphere	MGAETQTPYLEYVITVTEADGRFTPRVTRPGGVIEHDGRVSQAWAAASCAS
Ga0182024_107234742	3300014501	Permafrost	MSAPDPIAYLEYVITVTEEGGRFTARVTREGGTIQHDGRVSEAWATASCGSLNRAVLVAKTAIDNDHVR*
Ga0157377_111755862	3300014745	Miscanthus Rhizosphere	VAHLGLEDPRQESLMSADTQIIYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAVHVAKTAIDNDHVR*
Ga0157379_100066788	3300014968	Switchgrass Rhizosphere	MSAETRTVYLEYVITTTEDAGRFTSRVTREGGMIEHDGHVSEGWRTASCASLDRAVHVAKTAIDTDRIR*
Ga0157379_100729323	3300014968	Switchgrass Rhizosphere	MGVETQTTYLEYVISVTEADGRFTPRVTRPGGFIEHDGRVSEAWAAASCGSLDRAILMARNAIDNDRIR*
Ga0167667_10110391	3300015189	Glacier Forefield Soil	MSADTQVAYHEYLITVTEDAGRFTARVTREGALIEHDGHVSEGWKAASCASLDRAVHIAKTAIDTDKVR*
Ga0173480_102743543	3300015200	Soil	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHDGHVSEGWKAASCASLDRAVHIAKTAIDTDKVR*
Ga0132255_1033268601	3300015374	Arabidopsis Rhizosphere	MNADTQIVYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAIHVAKTAIDNDRIR*
Ga0190274_135278231	3300018476	Soil	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHDGHVSEGWKAASCASLDRAVHVAKTAIDSDKVR
Ga0182031_15416893	3300019787	Bog	MSADTQIAYLEYTITVTEEAGRFTSRVTREGGTIEHDGHVSEGWKAASCASLDRAVLVAKTAIDNDRVR
Ga0193744_10244701	3300019874	Soil	MSADTQVIYLEYKITVTEQAGRFTSRVTREGAMIEHDGNVSEAWAAASCASLDRAILVAKTAIDSDRIR
Ga0193726_12312252	3300020021	Soil	MSADTQVIYLEYKITVTELAGRFTSRVTRDGAMIEHDGHVSEAWAAASCASLDRAILVAKTAIDSDRIR
Ga0193752_10430423	3300020027	Soil	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHDGNVSEGWKAASCASLDRAVHIAKTAIDTDKIR
Ga0193753_103275782	3300020034	Soil	MSADTQVIYLEYKITVTEQAGRFTSRVTREGAMIEHDGHVSEAWAAASCASLDRAILVAKTAIDSDRIR
Ga0210404_100700723	3300021088	Soil	MSADTQITYLEYLITVTEEAGRFTSRVTREGGLIEHDGHVSEGWKAASCASLDRAVRVAKAAIDSDRVR
Ga0194048_100344502	3300021519	Anoxic Zone Freshwater	MSAETQTSYLEYTITVTQVDGRFTPRVTREGGLIEHDGNVSEVWAAASCGSLDRAIQTAKAAIDNDRIR
Ga0210409_116274801	3300021559	Soil	SADTQITYLEYLITVTEEAGRFTSRVTREGGLIEHDGHVSEGWKAASCASLDRAVRVAKAAIDSDRVR
Ga0207642_105103582	3300025899	Miscanthus Rhizosphere	MGAETQTPYLEYVITVTEADGRFTPRVTRPGGVIEHDGRVSQAWAAASCASLERAIQTARTAIDNDRIR
Ga0207688_107582972	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSVDTRIPYHEYIITVTEEGGRFTPRVSREGALIEHDGHVSEVWAAASCASLDRAILVARTAIDT
Ga0207680_101007623	3300025903	Switchgrass Rhizosphere	MSADTQIIYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAVHVAKTAIDNDHVR
Ga0207705_101688011	3300025909	Corn Rhizosphere	MSADTRVIYLEYTITVTEEAGRFTSRVTREGGLIEHDGQQSEGWKAASCASLDRAILVAKTAIDNDRIR
Ga0207654_103752082	3300025911	Corn Rhizosphere	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHNGHVSEGWKAASCASLDRAVHVAKTAIDSDAIR
Ga0207695_105227172	3300025913	Corn Rhizosphere	MHEVSSSRTAETQVAYLEYMITVMEDGGRFTAHVRREGGLIEHDGQLSEVWAGASCASFDRAVFVAKTAIDNDRIR
Ga0207671_104475701	3300025914	Corn Rhizosphere	MGVDTQTTYLEYVITVSEANGRFTPRVTRPGGMIEHDGRVSEAWAAASCGSPERAIQTARAAIDNDRIR
Ga0207657_107672132	3300025919	Corn Rhizosphere	MSATTTYLEYTITVTEEGGRFTPRVRREGGLIEHDGNVSEVWSAASCNSPERAVLVAKTAIDTDRIR
Ga0207687_101214743	3300025927	Miscanthus Rhizosphere	MGAVTQTSYLEYTITVTEDAGRFTPRVTREGGMIEHDGHTSEIWVASSCASLDRAILVARTAIDSDRIR
Ga0207706_103332672	3300025933	Corn Rhizosphere	MNADTQIVYLEYVITVTEEAGRFTSRVTREGGLIEHDGHLSEGWKAASCASLDRAIHVAKTAIDNDHIR
Ga0207704_112608881	3300025938	Miscanthus Rhizosphere	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHDGNVSEGWKAASCASLDRAVHVAKTAIDTDKVR
Ga0207711_118910281	3300025941	Switchgrass Rhizosphere	MSAETRTEYLEYIITTTEEAGRFTSRVTREGAMIEHDGHVSEGWRTASCASLDRAVHVAKTAIDTDRIR
Ga0207667_114560662	3300025949	Corn Rhizosphere	ESFKSCMSADTQIAYLEYVITVTQEAGRFTSRVTREGGLIEHDGHFSEGWKAASCASLDRAIQVAKTAIDNDHIR
Ga0207712_119379222	3300025961	Switchgrass Rhizosphere	MSAETRTEYLEYIITTTEEAGRFTSRVTREGGMIEHDGHVSEGWKTASCASLDRAVHVAKTAIDTDRIR
Ga0207677_101185953	3300026023	Miscanthus Rhizosphere	MGVETQTTYLEYVISVTEADGRFTPRVTRPGGLIEHDGRVSEAWAAASCGSLDRAILTARNAIDNDRIR
Ga0207677_103724952	3300026023	Miscanthus Rhizosphere	MGAETQTPYLEYVITVTEADGRFTPRVTRPGGVIEHDGRVSQAWAAASCASLERAIQTARTAIVNDRIR
Ga0207683_113383111	3300026121	Miscanthus Rhizosphere	MSADTQVAHHEYLITVTEEAGRFTARVTREGGLIEHNGHVSEGWKAASCASLDRAVHVAKTAIDTDAIR
Ga0209190_100126312	3300027736	Freshwater Lake	VLGPCVNTTKSEYFEYTITVTEESGRFTARVTRAGAMIEHDGNVSEIWAAPSSGSLDRAVQVARAAIDSDRIR
Ga0268266_100284433	3300028379	Switchgrass Rhizosphere	MSADTQIIYLEYVITVTEEAGRFTSRVTREGGLIEHNGHLSEGWKAASCASLDRAVRVAKTAIDNDHVR
Ga0302323_1023500852	3300031232	Fen	MSVDTQVAYLEYMITVSEEAGRFTPRVTREGAMIEHDGHTSEAWKAASCASLDRAVHIAKTAIDTDRIR
Ga0307513_102184093	3300031456	Ectomycorrhiza	MSADTQVAYHEYLITVTEEAGRFTARVTRDGGLIEHDGNVSEGWKAASCASLDRAVHVAKTAIDTDKVR
Ga0265314_101010186	3300031711	Rhizosphere	MSAETQTTYLEYTITVTQADGRFTPRVSREGAFIEHDGHVSEVWSAASCGSLDRAIQTAKAAIDNDRIR
Ga0307516_100272563	3300031730	Ectomycorrhiza	MSVETQVIYLEYMITVSEDAGRFTPRVTREGAMIEHDGHSSEGWKAASCASLDRAVHIAKTAIDTDRIR
Ga0316219_12229021	3300031759	Freshwater	MAADTAVTYLEYTITVTEDGGRFTPRVRREGGLIEHDGHVSEVWAAASCASHDRAVLVAKTAIDTDRVR
Ga0307470_100210075	3300032174	Hardwood Forest Soil	MSADTQVAYLEYMITVTEQSGRFTPRVTREGALIEHDGHVSQSWAAASCASLDRAVLVAKTAIDTDRIR
Ga0307470_113385632	3300032174	Hardwood Forest Soil	MGVETQTNYLEYVISVTEADGRFTPRVTRPGGFIEHDGRVSEAWAAASCGSLDRAILTARNAIDNDRIR
Ga0316224_11520932	3300032753	Freshwater	MSAETQTTYLEYTITVTQADGRFTPRVSREGAFIEHDGHVSEVWSAASCGSLDHAIQTAKAAIDNDRIR
Ga0335069_126346382	3300032893	Soil	MGTETQTTYLEYVITITEANGRFTPRVTRPGGLIEHDGRVSEVWSAASSVSLDRAIQVAKTAIDNDRIR
Ga0335071_121356761	3300032897	Soil	MGAETQTTYLEYIITVTEANGRFTPRVTRPGGLIEHDGRVSEVWSAASSVSLDRAIQVAKTAIDNDRIR
Ga0310811_100208276	3300033475	Soil	MNADTQIVYLEYVITVTEEAGRFTSRVTREGGLIEHNGHLSEGWKAASCASLDRAIHVAKTAIDNDHIR
Ga0310811_101636544	3300033475	Soil	MGAETQTTYLEYVITVIESDGRFTPRVTRPGKSIEHDGRMSEAWAAASCGSLERAIQTARAAIDDDRIR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099462

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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