Metagenome / Metatranscriptome Family F099456

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099456
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	129 residues
Representative Sequence	VSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPNIELLVLNTTGTGTDTPSLIRAVRANHPDLAVLHIGSSAPQGLPDDVPTLDESFTADELLSAVNALLPVGLTPSRN
Number of Associated Samples	88
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.14 %
% of genes near scaffold ends (potentially truncated)	57.28 %
% of genes from short scaffolds (< 2000 bps)	86.41 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.175 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (43.689 % of family members)
Environment Ontology (ENVO)	Unclassified (28.155 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.981 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.21% β-sheet: 15.38% Coil/Unstructured: 56.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.23.1.0: CheY-like	d3h5ia_	3h5i	0.87
c.23.1.0: CheY-like	d3hv2a_	3hv2	0.87
c.23.1.0: CheY-like	d3jtea1	3jte	0.87
c.23.1.0: CheY-like	d4d6ya_	4d6y	0.87
c.23.1.0: CheY-like	d4h60a1	4h60	0.87

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00072	Response_reg	11.65
PF00009	GTP_EFTU	10.68
PF06210	DUF1003	2.91
PF00177	Ribosomal_S7	1.94
PF02771	Acyl-CoA_dh_N	1.94
PF01594	AI-2E_transport	1.94
PF13672	PP2C_2	0.97
PF00164	Ribosom_S12_S23	0.97
PF13458	Peripla_BP_6	0.97
PF14492	EFG_III	0.97
PF09190	DALR_2	0.97
PF07228	SpoIIE	0.97
PF02224	Cytidylate_kin	0.97
PF08448	PAS_4	0.97
PF06745	ATPase	0.97
PF02881	SRP54_N	0.97
PF02518	HATPase_c	0.97
PF00069	Pkinase	0.97
PF03699	UPF0182	0.97
PF06490	FleQ	0.97
PF13453	zf-TFIIB	0.97
PF03144	GTP_EFTU_D2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.88
COG4420	Uncharacterized membrane protein	Function unknown [S]	2.91
COG0049	Ribosomal protein S7	Translation, ribosomal structure and biogenesis [J]	1.94
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.94
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.94
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.97
COG0283	Cytidylate kinase	Nucleotide transport and metabolism [F]	0.97
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.97
COG2204	DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains	Signal transduction mechanisms [T]	0.97

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.17 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	68.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.77 %
Unclassified	root	N/A	5.83 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	68.93 %
Unclassified	root	N/A	5.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	68.93 %
Unclassified	root	N/A	5.83 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.97 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.97 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	68.93 %
Unclassified	root	N/A	5.83 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2.91 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.97 %
Thalassobaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	66.02 %
Unclassified	root	N/A	5.83 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2.91 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2.91 %
Thalassobaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum	0.97 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.97 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	66.02 %
Unclassified	root	N/A	5.83 %
Sphingomonas paucimobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas paucimobilis	1.94 %
Thalassobaculum salexigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum salexigens	0.97 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.97 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.97 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.97 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	66.02 %
Unclassified	root	N/A	5.83 %
Sphingomonas paucimobilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas paucimobilis	1.94 %
Pseudomonas sp. HPB0071	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. HPB0071	0.97 %
Sphingomonas sp. ATCC 31555	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. ATCC 31555	0.97 %
Thalassobaculum salexigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum salexigens	0.97 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10629723	Not Available	536	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14183709	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300000956\|JGI10216J12902_101748293	All Organisms → cellular organisms → Bacteria → Proteobacteria	4178	Open in IMG/M
3300000956\|JGI10216J12902_108820989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	563	Open in IMG/M
3300003993\|Ga0055468_10225422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Thalassobaculum → Thalassobaculum salexigens	583	Open in IMG/M
3300004156\|Ga0062589_100392076	All Organisms → cellular organisms → Bacteria → Proteobacteria	1123	Open in IMG/M
3300004157\|Ga0062590_101248817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. ATCC 31555	728	Open in IMG/M
3300004157\|Ga0062590_101451916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	685	Open in IMG/M
3300004479\|Ga0062595_100578450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	868	Open in IMG/M
3300004643\|Ga0062591_100513602	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300004778\|Ga0062383_10400593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	675	Open in IMG/M
3300005093\|Ga0062594_102581145	Not Available	560	Open in IMG/M
3300005337\|Ga0070682_100851304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. HPB0071	745	Open in IMG/M
3300005436\|Ga0070713_101396608	Not Available	679	Open in IMG/M
3300005440\|Ga0070705_101219788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	620	Open in IMG/M
3300005445\|Ga0070708_101892210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas paucimobilis	553	Open in IMG/M
3300005454\|Ga0066687_10468997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	740	Open in IMG/M
3300005458\|Ga0070681_10543656	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005467\|Ga0070706_101881275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas paucimobilis	543	Open in IMG/M
3300006237\|Ga0097621_101980691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	556	Open in IMG/M
3300006618\|Ga0101566_11413896	Not Available	605	Open in IMG/M
3300006854\|Ga0075425_101494934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	763	Open in IMG/M
3300006871\|Ga0075434_101360021	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	720	Open in IMG/M
3300007076\|Ga0075435_101022514	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	722	Open in IMG/M
3300009081\|Ga0105098_10616784	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	567	Open in IMG/M
3300009147\|Ga0114129_11466802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	839	Open in IMG/M
3300009157\|Ga0105092_10228262	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1044	Open in IMG/M
3300012930\|Ga0137407_10808670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	885	Open in IMG/M
3300012941\|Ga0162652_100043691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	712	Open in IMG/M
3300012955\|Ga0164298_10836659	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	662	Open in IMG/M
3300012957\|Ga0164303_10305665	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	940	Open in IMG/M
3300012958\|Ga0164299_10133386	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300012960\|Ga0164301_10007126	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	4249	Open in IMG/M
3300012961\|Ga0164302_10176594	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1288	Open in IMG/M
3300012961\|Ga0164302_10442114	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	901	Open in IMG/M
3300012984\|Ga0164309_10468753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	957	Open in IMG/M
3300012989\|Ga0164305_11099389	Not Available	683	Open in IMG/M
3300013100\|Ga0157373_10857319	Not Available	672	Open in IMG/M
3300013772\|Ga0120158_10491256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	543	Open in IMG/M
3300014497\|Ga0182008_10494063	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	672	Open in IMG/M
3300015374\|Ga0132255_102890474	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	734	Open in IMG/M
3300017997\|Ga0184610_1008812	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2479	Open in IMG/M
3300018027\|Ga0184605_10423108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	591	Open in IMG/M
3300018028\|Ga0184608_10016414	All Organisms → cellular organisms → Bacteria	2620	Open in IMG/M
3300018028\|Ga0184608_10273238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	743	Open in IMG/M
3300018053\|Ga0184626_10015906	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
3300018061\|Ga0184619_10351912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	672	Open in IMG/M
3300018061\|Ga0184619_10420789	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	601	Open in IMG/M
3300018063\|Ga0184637_10319112	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	938	Open in IMG/M
3300018063\|Ga0184637_10613257	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	612	Open in IMG/M
3300018071\|Ga0184618_10070398	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300018076\|Ga0184609_10163226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1029	Open in IMG/M
3300018422\|Ga0190265_10078084	All Organisms → cellular organisms → Bacteria	3019	Open in IMG/M
3300018422\|Ga0190265_11584300	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	767	Open in IMG/M
3300018422\|Ga0190265_12251312	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300018429\|Ga0190272_12665205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	548	Open in IMG/M
3300019279\|Ga0184642_1177513	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	923	Open in IMG/M
3300019877\|Ga0193722_1010714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	2331	Open in IMG/M
3300019877\|Ga0193722_1045758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1114	Open in IMG/M
3300019879\|Ga0193723_1009633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3125	Open in IMG/M
3300019881\|Ga0193707_1102081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	856	Open in IMG/M
3300020022\|Ga0193733_1004649	All Organisms → cellular organisms → Bacteria	3949	Open in IMG/M
3300020068\|Ga0184649_1283899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	768	Open in IMG/M
3300020068\|Ga0184649_1521373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	550	Open in IMG/M
3300021073\|Ga0210378_10026003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2349	Open in IMG/M
3300021080\|Ga0210382_10388994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	617	Open in IMG/M
3300021090\|Ga0210377_10475337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	727	Open in IMG/M
3300021413\|Ga0193750_1012343	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300025324\|Ga0209640_10869478	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300025325\|Ga0209341_11111169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	569	Open in IMG/M
3300025796\|Ga0210113_1122565	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	507	Open in IMG/M
3300026088\|Ga0207641_10270564	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300026095\|Ga0207676_10079935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2653	Open in IMG/M
3300028715\|Ga0307313_10063751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1094	Open in IMG/M
3300028716\|Ga0307311_10170481	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	631	Open in IMG/M
3300028784\|Ga0307282_10396872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	668	Open in IMG/M
3300028792\|Ga0307504_10129939	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	835	Open in IMG/M
3300028793\|Ga0307299_10337859	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	565	Open in IMG/M
3300028814\|Ga0307302_10703926	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	502	Open in IMG/M
3300028824\|Ga0307310_10684252	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	526	Open in IMG/M
3300028878\|Ga0307278_10207748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	873	Open in IMG/M
3300028881\|Ga0307277_10389699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	622	Open in IMG/M
3300028885\|Ga0307304_10099731	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1159	Open in IMG/M
3300030606\|Ga0299906_10076286	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300030619\|Ga0268386_10224555	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300030620\|Ga0302046_10549840	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	943	Open in IMG/M
3300030987\|Ga0308155_1003623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1034	Open in IMG/M
3300030988\|Ga0308183_1096999	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	666	Open in IMG/M
3300030990\|Ga0308178_1021313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1031	Open in IMG/M
3300030990\|Ga0308178_1164910	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	518	Open in IMG/M
3300031099\|Ga0308181_1038263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	864	Open in IMG/M
3300031099\|Ga0308181_1182804	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	507	Open in IMG/M
3300031125\|Ga0308182_1008376	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	766	Open in IMG/M
3300031229\|Ga0299913_10323415	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1530	Open in IMG/M
3300031424\|Ga0308179_1009521	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300031424\|Ga0308179_1020482	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300031716\|Ga0310813_12233696	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	518	Open in IMG/M
3300031858\|Ga0310892_10731333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	681	Open in IMG/M
3300031944\|Ga0310884_10515533	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	704	Open in IMG/M
3300033412\|Ga0310810_10064183	All Organisms → cellular organisms → Bacteria	4446	Open in IMG/M
3300033412\|Ga0310810_10555391	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300033475\|Ga0310811_10638058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1055	Open in IMG/M
3300034817\|Ga0373948_0009624	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.32%
Host-Associated	Host-Associated	10.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.96%
Aquatic	Environmental → Aquatic	21.36%
Plants	Host-Associated → Plants	10.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.99%
Sediment	Environmental → Aquatic → Sediment	10.68%
Freshwater	Environmental → Aquatic → Freshwater	8.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.91%
Marine	Environmental → Aquatic → Marine	1.94%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.97%
Roots	Host-Associated → Plants → Roots	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.77%
Loam	Environmental → Terrestrial → Soil → Loam	7.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.66%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.97%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	43.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.68%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.94%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.97%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.97%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006618	Soil microbial communities from the Leymus chinensis steppe, China - without N addition	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_106297231	3300000363	Soil	NALLQSITGLLRMSGYCVFQAYDAMAARELCGQLPDIEMLILNTTGAGVDSATLVRDIRKLHPALPVLHIGNRELDGMPGDVPTLAESFTATQLLTTVAELMPAREIATPAD*
ICChiseqgaiiFebDRAFT_141837092	3300000363	Soil	VSPPARKPSYGPRIVICDYNALLISVTGLLRMSGYCVFQAYNAQAARELCRELPNIGLLILNTAGTGSDTPTLVREIREHQINLPVLHIGTSPLDGLPSNVPTLAESFTADELLTMVDSLLPLPPGL*
JGI10216J12902_1017482937	3300000956	Soil	RFRRTKDPTVPPPSRPQSNEGRRIVIGDYNQLLQSVTGLLRMSGYVVYQAYDADAARELCGQLPDIDMLILNTTGTGVDSATPVRNIRVQHPHMPVLHIGNAELDGMPEDVPTLAESFTPARLLGTAEGLLPTRPARSPA*
JGI10216J12902_1088209891	3300000956	Soil	MVAQRPVSSGEGRRIVICDYNALLLSVTGLLRMSGYCVFQAYDAMAVRELCSQLPNIEMLILNTTGTGVDSATLVRDVRIQHPHMPVLHIGNAQLDGMPDDVPTLAESFTAPQLLTTVARLMPAR
Ga0055468_102254221	3300003993	Natural And Restored Wetlands	VLPPARAPFFGRRVVICDYNALLISVTGLLRMSGYCVFQAYDARAAHELCQQLPNISLLILNTTGTGSDTPTLVREIRKEHANLPVLHIGSSALDGMPSDVPTLAETFTADQLLTAVAGLLPERRQPSGIGPRSMSRSISREDGYLP
Ga0062589_1003920761	3300004156	Soil	MPAPRIPPSNEGKRIVICDYNQLLQSVTGLLRMSGYVVYQAYDGLAAVELCVELPDIQLLVLNTIGTGIDLGSLIHEVRKRRTGLPVLHIGNTVPATLPADVPTLAEDFS
Ga0062590_1012488171	3300004157	Soil	LSSQHPHLPPRGLRIVICDHSALLVSVTGLLRMSGYIVFQAYDGPAARELCRELPNIELLILTSTGMGIDTPTLVRNIRELHPNLPVLHIGNSALVGMPDNVPTLTETFTADQLLSSVGALVPVGV*
Ga0062590_1014519161	3300004157	Soil	MLAQRPVPSNEGRRIVICDYNALLQSVTGLLRMSGYCVFQAYDAMAARELCAQLPNIEMLILNTTGTGVDSATLVRDIREDHPALPVLHIGNWILDGMPDDVPTLAESFTAPQLLTTVVGLLPGRKRATQIH*
Ga0062595_1005784501	3300004479	Soil	PAKAGCRRRTKDATMLAQRPVPSNEGRRIVICDYNALLQSVTGLLRMSGYCVFQAYDAMAARELCAQLPNIEMLILNTTGTGVDSATLVRDIREDHPALPVLHIGNWILDGMPDDVPTLAESFTAPQLLTTVVGLLPGRKRATQIH*
Ga0062591_1005136021	3300004643	Soil	MPAPRIPPSNEGKRIVICDYNQLLQSVTGLLRMSGYVVYQAYDGLAAVELCVELPDIQLLVLNTIGTGIDLGSLIHEVRKRRTGLPVLHIGNTVPATLPADVPTLAEDFSSVSLLQTVDGLIQHGPPVEEAREQ*
Ga0062383_104005932	3300004778	Wetland Sediment	PAAEGRRIVICDYNALLLSVTGLLRMSGYVVFQAYDARAARELCLELPNIELLILNTARTGTDSPTLVREIRVTHPDLPALHIGPCELEGMPANVPTLDESFTSEELLSAVRSLMPPRALAPAG*
Ga0062594_1025811452	3300005093	Soil	YNALLQSVTGLLRMSGYCVFQAYDAKAARELCGQLQDIEMLILNTSGTGIDSATLVRDIRERHPALPVLHIGNRELDGMPHDVPTLAESFTAEQLLATVAGLLPAQQIATPIE*
Ga0070682_1008513041	3300005337	Corn Rhizosphere	MLAQRLDPSPKGRRIVICDYNALLLSVTGLLRMSGYCVFQAYDAMAVRELCRQLPNIEMLILNTTGTGVDSATLVRDIRESHPALPVLHIGNWELDGMPDDVPTLAESFTAQQLLTTVAGLLPAR
Ga0070713_1013966082	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	NALLLSVTGLLRMSGYCVFQAYDAMAVRELCSQLPNIEMLILNTTGTGVDSATLVRDVRIQHPHMPVLHIGNAQLDGMPDDVPTLAESFTAPQLLTTVARLMPARGIATPAA*
Ga0070705_1012197881	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLAQRLDPSPKGRRIVICDYNALLLSVTGLLRMSGYCVFQAYDAMAVRELCSQLPNIEMLILNTTGTGVDSATLVRDVRIQHPHMPVLHIGNAQLDGMPDDVPTLAESFTAPQLLTTVARLMPARGIATPAA*
Ga0070708_1018922101	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEARRIVICDYNALLLSVTGLLRISGYSVFQAHDGLAARELCYELPKIGLLILNSTGAGLDTPSLIGLIRSEHPDLAVLHIGPSRLPGMPSNVPTLPESFTADQLLR
Ga0066687_104689971	3300005454	Soil	VLPPEHDPSSEARRIVICDYNALLLSITGLLRMSGYSVFQAHDGLAARELCYELPNIALLILNTTGSGTDTPTLVQLIRREHPDLPALHIGNAPLAGMPANVPTLTESFTADQLLKTVESLMPNGKIADVLTGCT*
Ga0070681_105436562	3300005458	Corn Rhizosphere	VSPPVRPLDTDGRRIVICDYNALLLSVTGLLRMSGFVVFQAYDARAALELCAELPNIDLLILNTAGTGTDSPTLVREIRETHPHLSALHIGPTSLEGMPANVPTLDESFTADQLLAAVRKLLPPRVSVLRQAG*
Ga0070706_1018812751	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEARRIVICDYNALLLSVTGLLRISGYSVFQAHDGLAARELCYELPKIGLLILNSTGAGLDTPSLIGLIRSEHPDLAVLHIGPSRLPGMPSNVPTLPESFTADQLLRIVESLMPEPEIANVPAG
Ga0097621_1019806912	3300006237	Miscanthus Rhizosphere	GLHMLAPRPVPSSNGRRIVICDYNALLLSVTGLLRMSGYCVFQAYDAMAVRELCSQLPNIEMLILNTTGTGVDSATLVRDVRIQHPHMPVLHIGNAQLDGMPDDVPTLAESFTAPQLLTTVARLMPARGIATPAA*
Ga0101566_114138961	3300006618	Soil	VLASQPDRPIEGRRIVICDYNLLLQSVTGLLRMNGYTVFQAYDADAARELCAQLENIEMLILNTTGTDSATLVQDIRRDAPEMPVLHIGNVQLAGMPDDVPTLAESFTSDLLLST
Ga0075425_1014949341	3300006854	Populus Rhizosphere	VRPPADDAFHEARRIVICDYNALLLSVTGLLRISGYRVFQAHDGLDARELCYELPKIGLLILNSTGAGVDTPSLIGLIRSEHPDLAVLHIGSSPLPGMPSDVPTLPESFTADQLLGIVE
Ga0075434_1013600211	3300006871	Populus Rhizosphere	VSANRFSRCNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSELCAQLPGIELLILNTTGTGTDSVGLVRHVRIDHPEMAVLHIGDAELDGMPNDVPTLGESFTSDVLLEAVAD
Ga0075435_1010225141	3300007076	Populus Rhizosphere	VWPPADDASIEARRIVICDYNALLLSVTGLLRISGYRVFQAHDGLDARELCYELPKIGLLILNSTGAGVDTPSLIGLIRSEHPELAVLHIGSSPLPGMPSDVPTLPESFTADQLLSIVESLMPAP
Ga0105098_106167841	3300009081	Freshwater Sediment	VSPAAHDRSLSQGRRIVICDYNALLLSVTGLLRMSGYCVFQAYNAGAARELCLQLPDISLLILNTTGTGTDTPTLVREIRMNQPNLPVLHIGASALGGMPADVPTLAESFTAGQLLTAVEALLSPAEIASIGA*
Ga0114129_114668022	3300009147	Populus Rhizosphere	VSPPEHDSSSEARRIVICDYNALLLSVTGLLRMSGYSVFQAHDGLAARELCYELPNIALLILNTTGSGTDTPTLVQLIRREHPDLPALHIGNEPLAGMPANVPTLTESFTSEQLLKTVESLMNSVRRPLSQISRTTLLEKEEGVA*
Ga0105092_102282621	3300009157	Freshwater Sediment	VLALVHDPSSSEGRRIVICDYNALLLSVTGLLRMSGYCVFQAYNAGAARELCLQLPDISLLILNTTGTGTDTPTLVREIRVNQPNLPVLHIGASALGGMPADVPTLAESFTAGQLLTAVEALLSPAEIASIGAQ*
Ga0137407_108086702	3300012930	Vadose Zone Soil	MARIGYALMVGTAYQSPVRYGTFRQYLNPPAKAGSHRRTKDPKVLSSTLALETKGRRIVICDYNALLLSVTGLLRMSGFIVFQAYDAQAALELCGELPNIELLILNTTGTGTDSPSLVRQIRERHPKLPALHIGPSAVEGMPANVPTLAESFTA
Ga0162652_1000436912	3300012941	Soil	VSPVTNPLDYEGRRIVICDYNALLLSVTGLLRMSGFVVFQAYDARAALELCAELPDIELLILNTTGTGTDSPTLVREIREKHPNLPALHIGPTALDGMPQNVPTLDESFTADELLAAVRKLLPP
Ga0164298_108366592	3300012955	Soil	VSANRFSRSNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSELCTQLPGIELLILNTTGTGTDSVGLVRHVRIDHPGMAVLHIGDAELDGMPEDVPTLGESFTSAVLLEAVADLLPAR*
Ga0164303_103056652	3300012957	Soil	ANRFSRSNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSEVCTQLPGIELLILNTTGTATDSVRLVRHFRIDHPGMAVLHIGDAELDCMPDDVPTLGESFTSAVLLEAVADLLPAR*
Ga0164299_101333863	3300012958	Soil	FTVSANRFSRSNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSELCTQLPGIELLILNTTGTGTDSVRLVRHVRIDHPGMAVLHIGDAELDGMPDDVPTLGESFTSAVLLEAVADLLPAR*
Ga0164301_100071263	3300012960	Soil	VSANRFSRSNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSELCTQLPGIELLILNTTGTGTDSVRLVRHVRIDHPGMAVLHIGDAELDGMPDDVPTLGESFTSAVLLEAVADLLPAR*
Ga0164302_101765941	3300012961	Soil	VSANRFSRSNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSELCTQLPGIELLILNTTGTGTDSVGLVRHVRIDHPGMAVLHIGDAELDGMPDDVPTLGESFTSAVLLEAVADLLPAR*
Ga0164302_104421142	3300012961	Soil	MLAQRLDPSPEGRRIVICDYNALLQSVTGLLRMSGYCVFQAYDAMAARELCGQLPGIEMLILNTTGTGIDSPTLVQDIRKHHPALPVLHIGNWELDGMPDDVPTLAESFTATQLLTTVAELMPAREIAAPID*
Ga0164309_104687531	3300012984	Soil	MLTDRLVPSTKGRRIVICDYNALLLSVTGLLRMSGYCVFQAYDAMAVRELCSQLPNIEMLILNTTGTGVDSATLVRDVRIQHPHMPVLHIGNAQLDGMPDDVPTLAESFTAPQLLTTVARLMPARGIATPAA*
Ga0164305_110993891	3300012989	Soil	NALLQSVTGLLRMSGYCVFQAYDAMAARELCAQLPDIEMLILNTAGTGVDSATLVREIREHHPALPVLHIGSRELDGMPDDVPTLTESFTAPQLLTTVADLMPTREIARPID*
Ga0157373_108573192	3300013100	Corn Rhizosphere	LRIVICDHSALLLSVTGLLRMSGYIVFQAYDGLAARELCRELPNIELLSLTSTGMGIDTPTLVRNIRELHPNLPVLHIGNSALVGMPDNVPTLTETFTADQLLSSVGALVPVGV*
Ga0120158_104912562	3300013772	Permafrost	STEGRRIVICDYNALLLSVTGLLRLAGYCVFQAHDGYAAQELCLELPKIDLLILNTYGTGIDTGDLVRGLRVLRPGFAVLHIGLSEVAGLPADVPTLLEGFTPEDLLRNGRAPPTVRSASAF*
Ga0182008_104940631	3300014497	Rhizosphere	MLAQRPVPSNRGRRIVICDYNALLQSITGLLRISGYCVFQAYDATAARELCGQLPDIEMLILNTTGTGVDSATLVREIRERHPILPVLHIGNGELDGMPDDVPTLAESFTARQLLRTVAGLMPARDRHPVE*
Ga0132255_1028904741	3300015374	Arabidopsis Rhizosphere	MLAQRPVPSAKGQRIVICDYNALLQSVTGLLRMSGYCVFQAYDAKAARELCGQLQGIEMLILNTSGTGIDSATLVRDIRERHPALPVLHIGNRELAGMPHAVPTLAESFTAEQLLATVAGLLPAQQIATP
Ga0184610_10088122	3300017997	Groundwater Sediment	VSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPNIELLVLNTTGTGTDTPSLIRAVRANHPDLAVLHIGSSAPQGLPDDVPTLDESFTADELLSAVNALLPVGLTPSRN
Ga0184605_104231081	3300018027	Groundwater Sediment	VSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPDIELLVLNTTGTGTDTPSLIRAVRADQPGLAVLHIGASAPKDLPDDVPSLTETLTPDELLSAV
Ga0184608_100164144	3300018028	Groundwater Sediment	VSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAALELCRELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0184608_102732381	3300018028	Groundwater Sediment	VSSPPSFEGRRIVICDYNALLLSVTGLLRMSGYCVFQAHDGQAADELCRELPDIELLVLNTFGTGTDTPSLIRTIRASHPGLPVLHIGSSVPAGLPADVPTLAESFTADELLRTVARLCDGVGKKGLTLERN
Ga0184626_100159061	3300018053	Groundwater Sediment	VSSSPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPNIELLVLNTTGTGTDTPSLIRAVRANHPDLAVLHIGSSAPQGLPDDVPTLGESFTADELLSAVNALLPVVGQFGALHRV
Ga0184619_103519121	3300018061	Groundwater Sediment	ASLPAKAGRPCRTLGPTVSSPPSPEGRRIVICDYKALLLSVTGLLRMNGYCVFQAHDGRAANELCRELPDIELLVLNTFGTGTDTPSLIRTIRASHPGLPVLHIGSSVPAGLPADVPTLAESFTADELLRTVARLCDGVGKKGLTLERN
Ga0184619_104207891	3300018061	Groundwater Sediment	VSSPPSLEGRRIVICDYNALLLSVTGLLRMSGYCVFQAHDGRAANELCRELPDIELLVLNTFGTGTDTPSLIRTVRASHPGLPVLHIGSSVPAGLPSDVPTLAESFTADELLRTVARLCDGVGKKGLTLERN
Ga0184637_103191121	3300018063	Groundwater Sediment	LQTVAHLIPAKAGRSRRTKDPTVSSSPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAALELCRELPNIELLVLNTSGTGTDTPSLIRAVRANHPGLAVLHIGLSAPQGLPDDVPSLTESFTADELLRAVGALLPAELTPGRN
Ga0184637_106132571	3300018063	Groundwater Sediment	PAKAGRPRRTKDLTVSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPNIELLVLNTTGTGTDTPSLIRAVRANHPGLAVLHIGLSAPQGLPDDVPTLGESFSADELLSAVGALLPAEVTPGLN
Ga0184618_100703981	3300018071	Groundwater Sediment	IVICDYNALLLSVTGLLRMSGYCVFQAHDGQAADELCRELPDIELLVLNTLGTGTDTPSLIRTVRALHPGLPVLHIGKSVPAGLPADVPTLPESFTADELLTTVGVLCDGAGPKKG
Ga0184609_101632262	3300018076	Groundwater Sediment	VSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPNIELLVLNTTGTGTDTPSLIRAVRANHPDLAVLHIGSSAPQGLPDDVPTLGESFTADELLSAVNALLPVVGQFGALHRV
Ga0190265_100780843	3300018422	Soil	VPFPARAPGSMGSRIVICDYNALLLSVTGLLRMSGYCVFQAYDAQAARELCRELPDIGLLVLNTTGTGTDSPSLVRDIRKKQPDLPVLHIGASALEGMPADVPTIAESFTADQLLLAVEALMPREMHGYSLAAER
Ga0190265_115843001	3300018422	Soil	VPFPARAPVSKGSRIVICDYNALLLSVTGLLRMSGYCVFQAYDAQAARELCRELPDIGLLVLNTTGTGTDSPSLVRDIRKKQPNLPVLHIGASALEGMPVDVPTIAESFTADQLLLAVDALMPREMHGYSLAAER
Ga0190265_122513122	3300018422	Soil	ALLLSVTGLLRMSGYCVFQAHNGQAARELCQELPNIELLVLNTSGTGSHTPTIVRNVRQTHPGLAVLHIGPDLEGLPANVPSIPESFSAEELLKAVRSLLPPGLTPSPN
Ga0190272_126652051	3300018429	Soil	MFPAKHPLDYEGRRIVICDYNALLLSVTGLLRMSGFVVFQAYDARAALELCAELPNIELLILNTTGTGTDSPTLVREIREKHPDLPALHIGPAVLDGMPPNVPTLDETFTAEQLLAAVRKLLPPRMSVLRP
Ga0184642_11775132	3300019279	Groundwater Sediment	VSSPPSPEGRRIVICDYNALLLSVTGLLRMTGYCVFQAHDAQAADELCRELPDIELLVLNTFGTGTDTPSLIRTVRATHPGLPVLHIGSSVPAGLPADVPTLPESFTADELLRTVARLCDGVGKKGLTLERN
Ga0193722_10107143	3300019877	Soil	VYSPPSPEGRRIVICDYNALLLSVTGLLRMSGYCVFQAHDGQAADELCRELPDIELLVLNTLGTGSDTPSLIRTVRTSHPGLPVLHIGSSVAGLPEDVPTLPESFSADELLRAVGALCAGGAKRGLTPYRN
Ga0193722_10457581	3300019877	Soil	MSPQRPVPSAQGRRIVICDYNELLHSVTGLLRMSGYCVFQAYDAMAARELCGQLPNIELLILNTTGTGVDTPTLVRQIRADEPALAVLHIGNWTLDGMPAGVPTLAESFTADQLLMTVDALLPTNLAAPRELLGPTRVMA
Ga0193723_10096331	3300019879	Soil	VYSPPSPEGRRIVICDYNALLLSVTGLLRMSGYCVFQAHDGQAADELCRELPDIELLVLNTLGTGSDTPSLIRTVRTSHPGLPVLHIGSSVAGLPEDVPTLPESFSADELLRAVGALC
Ga0193707_11020811	3300019881	Soil	RTLGPTVSSPPSLEGRRIVICDYNALLLSVTGLLRMTGYCVFQAHDAQAADELCRELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0193733_10046495	3300020022	Soil	VLPLARAPFYGRRIVICDYNALLVSVTGLLRMSGYCVFQAYDAGAARELCRELPNIELLILSTTGIGTDAPSLVRAIRGVHPSLPVLHIGTLVLDGMPADVPTLAESFTADQLLMAVEGLLPAQIDGPRLGLAPSA
Ga0184649_12838991	3300020068	Groundwater Sediment	VLPPARAPSSTGSRIVICDYNALLLSVTGLLRMSGYGVFQAYDAQAARELCSQLPDIGLLVLNTTGTGTDTPTLVREIRAKHPDLPVLHIGTSALDGMPADVPTLDESFTADELLLAVSALLPAGEALVL
Ga0184649_15213731	3300020068	Groundwater Sediment	TPAKAGRLRRIKDPTVSPPPSLEGRRIVICDYNALLLSVTGLLRMSGYCVFQAHDGLAARELCQELPNIELLVLNTTGTGTDTPNLVRAVRANHPGMAVLHIGSSAPPGLPDDVPTLGESFTAGDLLNAVGALLPKGLTPSRN
Ga0210378_100260033	3300021073	Groundwater Sediment	VSFPARAPASKGSRIVICDYNALLLSVTGLLRMSGYCVFQAYDARAARELCRELPDIGLLVLNTTGTGTDTPSLVRDIRKKQPNLPVLHIGTSALEGMPADIPTIAESFTADQLLLAVEALMSRETHEYSLTAET
Ga0210382_103889941	3300021080	Groundwater Sediment	VSSPPSPEGRRIVICDYNALLLSVTGLLRMSGYCVFQAHDAQAADELCRELPSIELLVLNTFGTGTDTPSLIRTVRALHPGLPVLHIGKSVPAGLPADVPTLPESFTADELLTTVGVLCDGAGPKKG
Ga0210377_104753372	3300021090	Groundwater Sediment	MLPPARAIETAGRRIVICDYNALLLSVTGLLRMSGFVVFQAYDARAALELCGELPNIELLILNTTGTGTDSPSLVREVREKHPSLPALHIGPSALAGMPANVPTLNESFTADELLAAVRGLLPPRLIALLPAG
Ga0193750_10123431	3300021413	Soil	VSSPPSPEGRRIVICDYNALLLSVTGLLRMTGYCVFQAHDAQAADELCRELPSIELLVLNTFGTGTDTPSLIRTVRALHPGLPVLHIGKSVPAGLPADVPTLPESFTADELLMTVSELCDGAGAGEKGLTLDRN
Ga0209640_108694781	3300025324	Soil	IVICDYTALLLSVTGLLRMSGYCVFQAYDAQAALELCRQLPDIGLLVLNTTGTGTDTPTLVRDIREDHPDLPVLHIGSSELDGMPADVPTLAESFTADQVLMAVGALMPAREMATLGEHNTL
Ga0209341_111111691	3300025325	Soil	GRRIVICDYNALLLSVTGLLRMSGYCVFQAHDGLAARELCQELPNIELLVLNTTGTGTDTPNLVRAVRANHPGMAVLHIGSSAPQGLPDDVPTLGESFTADDLLNAVGALLPKGLTPSRN
Ga0210113_11225651	3300025796	Natural And Restored Wetlands	VLPPARAPFFGRRIVICDYNALLISVTGLLRMSGYCVFQAYDARAAHELCQQLPNISLLILNTTGTGSDTPTLVREIRKEHANLPVLHIGSSALDGMPSDVPTLAETFTADQLLTAVAGLLPERRQPSGIGPRSMSRSISREDGY
Ga0207641_102705642	3300026088	Switchgrass Rhizosphere	ALLQSVTGLLRMSGYCVFQAYDAMAARELCAQLLDIEMLILNTSGTGIDSATLVRDIRERHPTLPVLHIGNRELDGMPHDVPTLAESFTAAQLLTTVAELMPTREIVPPIV
Ga0207676_100799352	3300026095	Switchgrass Rhizosphere	MLAQRPVPSAKGQRIVICDYNALLQSVTGLLRMSGYCVFQAYDAKAARELCGQLQGIEMLILNTSGTGIDSATLVRDIRERHPALPVLHIGNRELDGMPHDVPTLAES
Ga0307313_100637511	3300028715	Soil	VSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0307311_101704811	3300028716	Soil	VICDYNALLLSVTGLLRMSGFCVFQAHDGQAALELCRELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0307282_103968721	3300028784	Soil	ASEPRIVICDYNLLLLAVTGLLRMSGYSVFQAYDAPAARELCRALPNIGLLILNTTGTGTDSPSLVREIREKHPQLPVLHIGPEEVDGMPADVPTLAETFTSDQLLRSVDALLPARKTAKLQ
Ga0307504_101299391	3300028792	Soil	MLAQRPVSSNEGRRIVICDYNALLQSVTGLLRMTGYCVFQAYDAMAARELCGQLPDIEMLILNTTGAGIDSATLVRDIREHHPALPVLHIGNWELDGMPDDVPTLAESFTAQQLLETVAELMPAREMAAPIV
Ga0307299_103378591	3300028793	Soil	GRPRRTKDPTVSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0307302_107039261	3300028814	Soil	TDSSPPIPAKAGRPRRTKDPTVSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAALELCRELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0307310_106842521	3300028824	Soil	VICDYNALLLSVTGLLRMSGFVVFQAYDARAALELCAELPNIELLILNTTGTGTDSPTLVREIREKHPNLPALHIGPTALIGMPANVPTLDESFTAEQLLAAVRKVLPPRMSVLRPAG
Ga0307278_102077481	3300028878	Soil	VLPGKHPLDYEGRRIVICDYNALLLSVTGLLRMSGFVVFQAYDARAALELCAELPNIELLILNTTGTGTDSPTLVREIREKHPNLPALHIGPAALDGMPINVPTLDESFTAEQLLAAVRKLLPPRISVLRPAV
Ga0307277_103896991	3300028881	Soil	SCQAGRPRRTKDPTVSSPPSPEGRRIVICDYNALLLSVTGLLRMSGYCVFQAHDGQAADELCRELPDIELLVLNTFGTGTDTPSLIRTIRASHPGLPVLHIGSSVPAGLPADVPTLAESFTADELLRTVARLCDGVGKKGLTLERN
Ga0307304_100997312	3300028885	Soil	VLPGTHPLDYEGRRIVICDYNALLLSVTGLLRMSGFVVFQAYDARAALELCAELPNIELLILNTTGTGTDSPTLVKEIREKHPNLPALHIGPSALAGMPANVPTLDESFTAEQLLAAVRKVL
Ga0299906_100762863	3300030606	Soil	VSPLARGPSSKGNRIVICDYNALLLSVTGLLRMSGYCVFQAYDAQAARELCRELPDIGLLVLNTTGTGTDSPSLVRDIRRKHPNLPVLHIGASALEGMPADVPTIAESFTADQLLLAVDALMARETAGVTSPSPPGP
Ga0268386_102245551	3300030619	Soil	VSPPAREPSSKGSRIVICDYNALLLSVTGLLRMSGYCVFQAYDAQAARELCRELPDIGLLVLNTTGTGTDTPSLVRDIREKHPDLPVLHIGVSTLEGMPANVPTLAESFTADELLLAVDALMPRETHRYSLTT
Ga0302046_105498402	3300030620	Soil	SAPSSKGSRIVICDYNALLLSVTGLLRMSGYCVFQAYDAQAARELCRELPDIGLLVLNTTGTGTDSPSLVRDIRKKHPNLPVLHIGASALEGMPADVPTIAESFTADQLLLAVDALMVREPAGVTSPSPPGP
Ga0308155_10036232	3300030987	Soil	PPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAALELCRELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0308183_10969991	3300030988	Soil	VSSGSFFRSNEGRRIVICDYNQLLQSVTGLLRMSGYTVFQAYDADAARELCGQLGNIELLILNTTGSGTDSAQLVRNIRGEVPGMPVLHIGDAKLDGMPEDVPTLGESFTAASLLATVEGLLPRTGITV
Ga0308178_10213132	3300030990	Soil	AGRPRRTKDPTVSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0308178_11649101	3300030990	Soil	PAKAGRRRRTQGPTVSPGRIFRSNEGRRIVICDYNQLLQSVTGLLRMSGYTVFQAYDADAARELCGQLGNIELLILNTTGSGTDSAQLVRNIRGEVPGMPVLHIGDAKLDGMPEDVPTLGESFTAASLLATVEGLLPRTGITV
Ga0308181_10382631	3300031099	Soil	IPAKAGRPRRTKDPTVSSPPSFEGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0308181_11828041	3300031099	Soil	VSSGSFFRSNEGRRIVICDYNQLLQSVTGLLRMSGYTVFQAYDADAARELCGQLGNIELLILNTTGSGTDSAQLVRNIRGDVPGMPVLHIGDAKLDGMPEDVPTLGETFTAASLLATVEGLLPRTGITV
Ga0308182_10083761	3300031125	Soil	RPPSPDLRNDMSAPRPGQASRRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0299913_103234152	3300031229	Soil	MSPAVLDRAPAQGPRIVICDYNALLLSVTGLLRMSGYCVFQAYDAQAARELCFQLPEIALLVLNTTGTGTDTPTLVRQIREDHPNLAVLHVGNSALEGMPADVPTLAETFTAGQLLVAVERLVIGRAMASVG
Ga0308179_10095211	3300031424	Soil	RRTKDPTVSSPPSFDGRRIVICDYNALLLSVTGLLRMSGFCVFQAHDGQAARELCQELPDIELLVLNTTGTGTDTPSLIRAVRVNHPGLAVLHIGASAPQDLPDDVPSLTETFTPDELLSAVGALLSAELTPSRN
Ga0308179_10204821	3300031424	Soil	PDQGPALLASTPSLASEPRIVICDYNLLLLAVTGLLRMSGYSVFQAYDAPAARELCRALPNIGLLILNTTGTGTDSPSLVREIREKHPHLPVLHIGPEEVDGMPADVPTLAETFTSDQLLRSVDALLPARKTAKLQ
Ga0310813_122336961	3300031716	Soil	RPVPSAKGQRIVICDYNALLQSVTGLLRMSGYCVFQAYDAKAARELCGQLQDIEMLILNTSGTGIDSATLVRDIRERHPTLPVLHIGNRELDGMPHDVPTLAESFTAEQLLATVAGLLPAQQIATPIE
Ga0310892_107313331	3300031858	Soil	HAGRPCRTRDFTVSANRFSRSNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSELCTQLPGIELLILNTTGTGTDSVGLVRHVRIDHPGMAVLHIGDAELDGMPEDVPTLGESFTSAVLLEAVADLLPAR
Ga0310884_105155332	3300031944	Soil	VSANRFSRSNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSELCTQLPGIELLILNTTGTGTDSVGLVRHVRIDHPGMAVLHIGDAELDGMPDDVPTLGE
Ga0310810_100641831	3300033412	Soil	MLAQRPVPSAKGQRIVICDYNALLQSVTGLLRMSGYCVFQAYDAKAARELCGQLQDIEMLILNTSGTGIDSATLVRDIRERHPTLPVLHIGNRELDGMPHDVPTLAESFTAEQLLATVAGLLPAQQIATPIE
Ga0310810_105553912	3300033412	Soil	VLAQRPVSSNEGRRIVICDYNALLQSITGLLRMSGYCVFQAYDATAARELCGQLVDIEMLILNTTGAGVDSATLVRDIRKDHPTLPVLHIGNWALDGMPDDVPTLAESFTAAELLATVAELMPARETATPIY
Ga0310811_106380581	3300033475	Soil	AQRPVPSAKGQRIVICDYNALLQSVTGLLRMSGYCVFQAYDAMAARELCAQLPNIEMLILNTTGTGVDSATLVRDIREDHPALPVLHIGNWILDGMPDDVPTLAESFTAPQLLTTVVGLLPGRKRATQIH
Ga0373948_0009624_827_1204	3300034817	Rhizosphere Soil	VSANRFSRSNEGRRIIICDYNSLLQSVTGLLRMSGYTVFQAYDADAVSELCTQLPGIELLILNTTGTGTDSVGLVRHVRIDHPGMAVLHIGDAELDGMPDDVPTLGESFTSAVLLEAVADLLPAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences