Metagenome Family F099376

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099376
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	144 residues
Representative Sequence	VPAVERILLNALLSSEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG
Number of Associated Samples	89
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.94 %
% of genes near scaffold ends (potentially truncated)	98.06 %
% of genes from short scaffolds (< 2000 bps)	96.12 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.340 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (9.709 % of family members)
Environment Ontology (ENVO)	Unclassified (60.194 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.990 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.05% β-sheet: 0.00% Coil/Unstructured: 31.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
a.236.1.1: DNA primase DnaG, C-terminal domain	d6cbra1	6cbr	0.65766
a.236.1.0: automated matches	d4im9a_	4im9	0.63504
a.81.1.1: N-terminal domain of DnaB helicase	d1b79a_	1b79	0.53618
a.119.1.0: automated matches	d3v98a2	3v98	0.51833
e.11.1.1: Type II DNA topoisomerase C-terminal domain-like	d1bjta_	1bjt	0.51508

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF03979	Sigma70_r1_1	54.37
PF04545	Sigma70_r4	2.91
PF04542	Sigma70_r2	2.91

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	57.28
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.91
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.91
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
All Organisms	root	All Organisms	44.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
cellular organisms	root	All Organisms → cellular organisms	44.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.97 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	6.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.88 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	1.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.97 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.97 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	5.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	3.88 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.94 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.97 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.97 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.97 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	5.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.83 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	3.88 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.94 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.97 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	5.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.83 %
Burkholderia gladioli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	3.88 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	1.94 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.97 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.97 %
Desulfohalotomaculum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfohalotomaculum	0.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.34 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	5.83 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.83 %
Burkholderia gladioli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	3.88 %
Pseudomonas sp. URIL14HWK12:I1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. URIL14HWK12:I1	1.94 %
Micromonospora olivasterospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora olivasterospora	0.97 %
Desulfohalotomaculum alkaliphilum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfohalotomaculum → Desulfohalotomaculum alkaliphilum	0.97 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.97 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01A7DE2	Not Available	542	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105079971	Not Available	728	Open in IMG/M
3300005329\|Ga0070683_102116735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	540	Open in IMG/M
3300005335\|Ga0070666_10088206	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300005336\|Ga0070680_101181894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. URIL14HWK12:I1	661	Open in IMG/M
3300005336\|Ga0070680_101439952	Not Available	597	Open in IMG/M
3300005341\|Ga0070691_10943190	Not Available	535	Open in IMG/M
3300005344\|Ga0070661_101495282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	569	Open in IMG/M
3300005344\|Ga0070661_101917021	Not Available	504	Open in IMG/M
3300005367\|Ga0070667_100778129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	888	Open in IMG/M
3300005459\|Ga0068867_101041835	Not Available	744	Open in IMG/M
3300005530\|Ga0070679_100232965	All Organisms → cellular organisms → Bacteria → Acidobacteria	1801	Open in IMG/M
3300005546\|Ga0070696_101948967	Not Available	509	Open in IMG/M
3300005563\|Ga0068855_102010117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. URIL14HWK12:I1	584	Open in IMG/M
3300005563\|Ga0068855_102346433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Desulfohalotomaculum → Desulfohalotomaculum alkaliphilum	533	Open in IMG/M
3300005614\|Ga0068856_100453917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1303	Open in IMG/M
3300005616\|Ga0068852_102021253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	598	Open in IMG/M
3300005618\|Ga0068864_100116471	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300005618\|Ga0068864_102137431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	566	Open in IMG/M
3300005718\|Ga0068866_10462886	Not Available	832	Open in IMG/M
3300005834\|Ga0068851_10722820	Not Available	614	Open in IMG/M
3300005841\|Ga0068863_102136927	Not Available	570	Open in IMG/M
3300005842\|Ga0068858_102306306	Not Available	532	Open in IMG/M
3300006059\|Ga0075017_100462342	All Organisms → cellular organisms → Bacteria → Acidobacteria	959	Open in IMG/M
3300006102\|Ga0075015_100420020	Not Available	758	Open in IMG/M
3300006358\|Ga0068871_100665589	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300006358\|Ga0068871_101170037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora olivasterospora	721	Open in IMG/M
3300006806\|Ga0079220_10096660	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1521	Open in IMG/M
3300009093\|Ga0105240_10646887	All Organisms → cellular organisms → Bacteria → Acidobacteria	1159	Open in IMG/M
3300009098\|Ga0105245_10652762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300009098\|Ga0105245_12751930	Not Available	545	Open in IMG/M
3300009174\|Ga0105241_11431629	Not Available	663	Open in IMG/M
3300009174\|Ga0105241_11756278	Not Available	604	Open in IMG/M
3300009176\|Ga0105242_10581849	All Organisms → cellular organisms → Bacteria → Acidobacteria	1078	Open in IMG/M
3300009177\|Ga0105248_10685438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300009545\|Ga0105237_10329047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1532	Open in IMG/M
3300009545\|Ga0105237_11545554	Not Available	670	Open in IMG/M
3300009545\|Ga0105237_12162642	Not Available	566	Open in IMG/M
3300009551\|Ga0105238_11757338	Not Available	652	Open in IMG/M
3300009553\|Ga0105249_12035557	Not Available	647	Open in IMG/M
3300009553\|Ga0105249_13535521	Not Available	503	Open in IMG/M
3300010371\|Ga0134125_11684635	Not Available	690	Open in IMG/M
3300010373\|Ga0134128_11290984	Not Available	805	Open in IMG/M
3300010397\|Ga0134124_10502449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300010400\|Ga0134122_12925924	Not Available	531	Open in IMG/M
3300011119\|Ga0105246_10257580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1388	Open in IMG/M
3300011119\|Ga0105246_11814745	Not Available	583	Open in IMG/M
3300012931\|Ga0153915_12188313	Not Available	647	Open in IMG/M
3300012984\|Ga0164309_11403816	Not Available	595	Open in IMG/M
3300013100\|Ga0157373_10812312	Not Available	690	Open in IMG/M
3300013296\|Ga0157374_11449804	Not Available	709	Open in IMG/M
3300013297\|Ga0157378_13057917	Not Available	519	Open in IMG/M
3300014745\|Ga0157377_10383769	All Organisms → cellular organisms → Bacteria → Acidobacteria	952	Open in IMG/M
3300014968\|Ga0157379_11707143	Not Available	617	Open in IMG/M
3300014969\|Ga0157376_10670153	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300015203\|Ga0167650_1015904	All Organisms → cellular organisms → Bacteria → Acidobacteria	2096	Open in IMG/M
3300015371\|Ga0132258_13265028	All Organisms → cellular organisms → Bacteria → Acidobacteria	1117	Open in IMG/M
3300021088\|Ga0210404_10808263	Not Available	536	Open in IMG/M
3300021178\|Ga0210408_11464890	Not Available	512	Open in IMG/M
3300021445\|Ga0182009_10231130	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300025321\|Ga0207656_10449007	Not Available	651	Open in IMG/M
3300025862\|Ga0209483_1254730	Not Available	676	Open in IMG/M
3300025899\|Ga0207642_10593580	Not Available	688	Open in IMG/M
3300025903\|Ga0207680_10284456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300025911\|Ga0207654_11062377	Not Available	589	Open in IMG/M
3300025913\|Ga0207695_11287612	Not Available	611	Open in IMG/M
3300025914\|Ga0207671_10535855	All Organisms → cellular organisms → Bacteria → Acidobacteria	933	Open in IMG/M
3300025916\|Ga0207663_11336481	Not Available	577	Open in IMG/M
3300025919\|Ga0207657_10735101	Not Available	765	Open in IMG/M
3300025921\|Ga0207652_10470466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300025927\|Ga0207687_10678806	Not Available	873	Open in IMG/M
3300025929\|Ga0207664_10668082	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300025931\|Ga0207644_10726054	Not Available	829	Open in IMG/M
3300025938\|Ga0207704_11387280	Not Available	602	Open in IMG/M
3300025941\|Ga0207711_11019058	Not Available	768	Open in IMG/M
3300025944\|Ga0207661_12143076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	505	Open in IMG/M
3300026023\|Ga0207677_10691376	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300026035\|Ga0207703_12307841	Not Available	514	Open in IMG/M
3300026078\|Ga0207702_12333441	Not Available	523	Open in IMG/M
3300026088\|Ga0207641_10738794	Not Available	971	Open in IMG/M
3300026095\|Ga0207676_12099577	Not Available	563	Open in IMG/M
3300026142\|Ga0207698_10653474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1042	Open in IMG/M
3300027765\|Ga0209073_10045270	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1425	Open in IMG/M
3300028381\|Ga0268264_10364737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1379	Open in IMG/M
3300028381\|Ga0268264_12544675	Not Available	517	Open in IMG/M
3300030617\|Ga0311356_12075761	Not Available	501	Open in IMG/M
3300031057\|Ga0170834_107716946	Not Available	666	Open in IMG/M
3300031057\|Ga0170834_113917885	Not Available	594	Open in IMG/M
3300031231\|Ga0170824_119943106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	659	Open in IMG/M
3300031249\|Ga0265339_10229863	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300031474\|Ga0170818_103162682	Not Available	526	Open in IMG/M
3300031708\|Ga0310686_106605771	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300031708\|Ga0310686_107543330	Not Available	542	Open in IMG/M
3300031716\|Ga0310813_11103932	Not Available	727	Open in IMG/M
3300031740\|Ga0307468_101639475	Not Available	603	Open in IMG/M
3300031823\|Ga0307478_10209579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1571	Open in IMG/M
3300031962\|Ga0307479_10581925	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300032174\|Ga0307470_10819788	Not Available	723	Open in IMG/M
3300032180\|Ga0307471_100821390	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300032205\|Ga0307472_100828095	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300032421\|Ga0310812_10154716	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300033433\|Ga0326726_11414021	Not Available	677	Open in IMG/M
3300033475\|Ga0310811_10203717	All Organisms → cellular organisms → Bacteria → Acidobacteria	2411	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.28%
Environmental	Environmental	41.75%
Engineered	Engineered	0.97%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.28%
Terrestrial	Environmental → Terrestrial	38.83%
Aquatic	Environmental → Aquatic	2.91%
Solid Waste	Engineered → Solid Waste	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.33%
Sediment	Environmental → Aquatic → Sediment	1.94%
Peat	Environmental → Terrestrial → Peat	1.94%
Roots	Host-Associated → Plants → Roots	1.94%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Grass	Engineered → Solid Waste → Grass	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.36%
Loam	Environmental → Terrestrial → Soil → Loam	9.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Composting	Engineered → Solid Waste → Grass → Composting	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	9.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.94%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.97%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_01891310	2170459017	Switchgrass, Maize And Mischanthus Litter	LNALLSSEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG
INPhiseqgaiiFebDRAFT_1050799712	3300000364	Soil	LTAGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDETESLAQAEACLKGLKTSFQRRQTEEVRARIRTAEREGNLREALHWMTELQRVEEEVKRDG*
Ga0070683_1021167351	3300005329	Corn Rhizosphere	GVEPGLILEQFKKAATDRHAPGQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVE
Ga0070666_100882062	3300005335	Switchgrass Rhizosphere	SSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG*
Ga0070680_1011818941	3300005336	Corn Rhizosphere	GLILEQFKKAATERHAPGQVAAPQTKRTSVQIPALERILLNTLLSSEETRQQILPRLPAGLTAGFVTREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRSQLDEVRARVKMAGREGRPEEALHWTAELQRLEEEVKRDG*
Ga0070680_1014399522	3300005336	Corn Rhizosphere	ALRQMAEAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG*
Ga0070691_109431902	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PSELTAGFVSLEVINALRQMAAAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG*
Ga0070661_1014952821	3300005344	Corn Rhizosphere	AATDRHAPGQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG*
Ga0070661_1019170212	3300005344	Corn Rhizosphere	GFVSLEVIDALRQMAEAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG*
Ga0070667_1007781292	3300005367	Switchgrass Rhizosphere	AAVASDLAGYLGVEPGLILDQFKRAATDRHAPGQVASRPGASPATGPSSNGAPRVPVPAVERILLNALLSSEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG*
Ga0068867_1010418351	3300005459	Miscanthus Rhizosphere	LTAGFVSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR*
Ga0070679_1002329652	3300005530	Corn Rhizosphere	PSELTAGFVSLEVINALRQMAAAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRISFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG*
Ga0070696_1019489671	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RVQVPAVERILLNALLSSEAIRERILPELPAELTAGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEICDEAECLAQAEACLKGLKTSFRRRQTEEVRARIRTAEREGNLKEALHWMTELQRVEEEVKRDG*
Ga0068855_1020101171	3300005563	Corn Rhizosphere	ATERHAPGQVAAPQTKRTSVQIPALERILLNTLLSSEETRQQILPRLPAGLTAGFVTREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRSQLDEVRARVKMAGREGRPEEAFHWTAELQRLEEEVKRDG*
Ga0068855_1023464331	3300005563	Corn Rhizosphere	RAATDRHAPGQVAARHGSSAGPSPASGRSSNGTPRVALPAVERILLNALLSSEATRQQILPQLPAELTAGFVSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRD
Ga0068856_1004539171	3300005614	Corn Rhizosphere	IDALRQMAEAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG*
Ga0068852_1020212531	3300005616	Corn Rhizosphere	HAPGQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKHDR*
Ga0068864_1001164714	3300005618	Switchgrass Rhizosphere	PAELTAGFVSLEIIGALRQMADAGPVNFAALDARMSEPGRALLHEIVAADEISDEAECLAQAEACLQGLKTSFQRRQTEEVRTLIRTAEREGNLKEALHWMAELQRFEEEVKRDGQ*
Ga0068864_1021374311	3300005618	Switchgrass Rhizosphere	GQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG*
Ga0068866_104628862	3300005718	Miscanthus Rhizosphere	TERHAPGHVATQQPKRTAVQIPALERILLNTLLSSEETRQQILPRLPAGLTAGFITREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRSQLDEVRARVKMAGREGRPEEALHWTAELQRLEEEVKRDG*
Ga0068851_107228201	3300005834	Corn Rhizosphere	PAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLHVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG*
Ga0068863_1021369271	3300005841	Switchgrass Rhizosphere	GQVASRQGASPATGPSTNGAPRVPVPAVERILLNALLASEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG*
Ga0068858_1023063062	3300005842	Switchgrass Rhizosphere	SGPSSNGAPRVQVPAVERILLNALLSSESTREQILPQLPAELTAGFVSLEIIGALRQMADAGPVNFAALDARMSEPGRALLHEIVAADEISDEAECLAQAEACLQGLKTSFQRRQTEEVRTLIRTAEREGNLKEALHWMAELQRFEEEVKRDGQ*
Ga0075017_1004623422	3300006059	Watersheds	PGQVAAAQPKRTAVQIPALERILLNTLLSSEETRQQILPRLPAQLTAGFVSREVLDTFRQMAEVGPVNITALDARLSDAGRTLLHDIAAADEIGDDTECLAQADACLRRLQANFQRSQLDELRARVKTAGREGRSEEALHWTAELQRLEEEVKRDG*
Ga0075015_1004200202	3300006102	Watersheds	ILDQFKKAATDRHAPGQAGARHGASRGSSPASGPSSNGPPRVQVPAVERILLNALLSSESTRERILPQLPAELTAGFVSLEVIGALRQMAEAGSVNFAALDARLSELGRTLLHEIVAADEISEDAECLAQAEACLQGLKNSFQRRRMEEVRARIRTAEREGNLKEALHWMTELQRVEAEVKHDG*
Ga0068871_1006655892	3300006358	Miscanthus Rhizosphere	RILLNALLSSEATREQILPRLAAELTAGFVSLEVIDALRHMAEVGPVNFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLQTSFQRRRIEEVRVRIRTAEREGDLKEALHWMAELQRVEAEVKRDG*
Ga0068871_1011700371	3300006358	Miscanthus Rhizosphere	GVEPGLILDQFKRAATDRHAPGQVASRQGASPAAGSSSNNAPRIQVPAVERILLNALLSSEATREQILPQLPAELTAGFVSLEVIGALRQMAEAGAINFAALDARLSEPGRALLHDIVSADEISDEAECLAQAEACLKGLRSSFQRRQTEDVRARIRTAEREGNLKEALHWMTELQRVEEEVKRDG*
Ga0079220_100966601	3300006806	Agricultural Soil	AGFVSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR*
Ga0105240_106468871	3300009093	Corn Rhizosphere	KKAATDRHAPGQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG*
Ga0105245_106527622	3300009098	Miscanthus Rhizosphere	SNGTPRVALPAVERILLNALLSSEATRQQILPQLPAELTAGFVSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR*
Ga0105245_127519301	3300009098	Miscanthus Rhizosphere	LDQFKRAATDRHAPGQVASRQGASPATGPSTNGAPRVPVPAVERILLNALLASEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG*
Ga0105241_114316291	3300009174	Corn Rhizosphere	RIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG*
Ga0105241_117562781	3300009174	Corn Rhizosphere	TARIQVPAVERILLSTLLSSEHTRERILPQLAAELTAGFVSLEVMNALRQMAEAGSVNFAALDARLSEPGRALLHDIVAADEINDDGECLAQAEACLQGLKTSFRRRRMEEMRTRIRTAEREGNLKEAFHWMAELQRMEEEVKRDG*
Ga0105242_105818491	3300009176	Miscanthus Rhizosphere	QILPQLPAELTAGFVSLEIIGALRQMADAGPVKFAALDARMSEPGRALLHEIVAADEISDEAECLAQAEACLQGLKASFQRRQTEEVRVRIRTAEREGNLKEALHWMAELQRFEEEVKRDG*
Ga0105248_106854382	3300009177	Switchgrass Rhizosphere	VERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG*
Ga0105237_103290472	3300009545	Corn Rhizosphere	SHASSSSSNGTPRVQLPAVERILLNALLSSEDTRQRILPQLPSELTAGFVSLEVIDALRQMAEAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG*
Ga0105237_115455541	3300009545	Corn Rhizosphere	LERILLNTLLSSEETRQQILPRLPATMTAGFVTREVLDALRQMAEAGPVNFAALDARLSEPGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRSQLDEVRARVKMAGREGRPEEALHWTAELQRLEEEVKRDG*
Ga0105237_121626422	3300009545	Corn Rhizosphere	QILPRLPAGLTAGFVTREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDNDCLAQADACLRRLQANFQRGQLDELRARVKMAGREGRSEEALHWTAELQRLEEEVKRDG*
Ga0105238_117573381	3300009551	Corn Rhizosphere	FKKAATERHAPGQVTAPQPKRAAVQIPALERILLNTLLSSEETRQQILPRLPATMTAGFVTREILDALRQMAEAGPVNFAALDARLSEPGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRGQLDELRARVKTAGREGRSEEALHWTAELQRLEEEVKRDG*
Ga0105249_120355571	3300009553	Switchgrass Rhizosphere	REQILPRLAAELTAGFVSLEVIDALRHMAEVGPVNFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLQTSFQRRRIEEVRVRIRTAEREGDLKEALHWMAELQRVEAEVKRDG*
Ga0105249_135355211	3300009553	Switchgrass Rhizosphere	TREQILPRLPAELTAGFVSLEIIGALRQMADAGPVNFAALDARLSEPGRALLHDIVSADELSDEAECLAQAEACLQGLKTSFQRRQTEEVRVRIRTAEREGNLKEALHWMAELQRFEEEVKRDG*
Ga0134125_116846351	3300010371	Terrestrial Soil	KAATERHAPGQVAVPQPKRAAIQIPALERILLNTLLSSEETRQQILPRLPVAMTTGFVTREVLDALRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDSECLAQADACLRRLQANFQRGQLDELRARVKTAGREGRSAEALHWTAELQRLEEEVKRDG*
Ga0134128_112909842	3300010373	Terrestrial Soil	QRILGTMIDFPRQQILPRLPATMTAGFVTREILDALRQMAEAGPVNFAALDARLSEPGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRGQLDELRARVKTAGREGRSEEALHWTAELQRLEEEVKRDG*
Ga0134124_105024492	3300010397	Terrestrial Soil	SSEATREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG*
Ga0134122_129259241	3300010400	Terrestrial Soil	SEETRQQILPRLPADLTAAFVTREVLDALRQMAEAGPVNFAALDARLSDAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRGQLDELRARVKMAGREGRPEEALHWTAELQRLEEEVKRDG*
Ga0105246_102575802	3300011119	Miscanthus Rhizosphere	VPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG*
Ga0105246_118147451	3300011119	Miscanthus Rhizosphere	RQQILPRLPAGLTAGFVTREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDSECLAQADACLRRLQANFQRGQLDELRARVKMAGREGRSEEALHWTAELQRLEEEVKRDG*
Ga0153915_121883131	3300012931	Freshwater Wetlands	ERILLNTLLSSEETRRQILPRLPAELTAGFVSREVLDALRQMAEAGPVNFAVLDARLSEAGRTLLHDIAAADEIGDDTECLAQADACLRRLKVNFQRGQLDELRARVKTAGREGRTEEALHWTAELQRLEEEVKRDG*
Ga0164309_114038161	3300012984	Soil	EAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLKGLKTSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG*
Ga0157373_108123121	3300013100	Corn Rhizosphere	LVLEQFKRAATDRHAPGQVAARHGSSAGPSPASGRSSNGTPRVALPAVERILLNALLSSEATRQQILPQLPAELTAGFVSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR*
Ga0157374_114498041	3300013296	Miscanthus Rhizosphere	RESGINAAGKCELLEQFKKAATERHAPGQVTAPQPKRAAIQIPALERILLNTLLSSEETRQQILPRLPAGLTAGFVTREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDSECLAQADACLRRLQANFQRGQLDELRARVKMAGREGRSEEALHWTAELQRLEEEVKRDG*
Ga0157378_130579171	3300013297	Miscanthus Rhizosphere	ERILLNALLSSEAIRERILPELPAELTAGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEICDEAECLAQAEACLKGLKTSFQRRQTEEVRARIRTAEREGNLKEALHWMTELQSVEEEVKRDG*
Ga0157377_103837691	3300014745	Miscanthus Rhizosphere	RLPAGLTAGFVTREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRSQLDEVRARVKMAGREGRPEEALHWTAELQRLEEEVKRDG*
Ga0157379_117071432	3300014968	Switchgrass Rhizosphere	LPQLPAELTAGFVSLEVIGALRQMAEAGAINFAALDARLSEPGRALLHDIVSADEISDEAECLAQAEACLKGLRSSFQRRQTEDVRARIRTAEREGNLKEALHWMTELQRVEEEVKRDG*
Ga0157376_106701531	3300014969	Miscanthus Rhizosphere	ERILLNALLSSEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRAPLHDIASVDEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG*
Ga0167650_10159041	3300015203	Glacier Forefield Soil	ASSQGSNPASGASSNGAPRVNVPAVERILLNALLSSETTREQILPQLPAELTTGFVSLEIIGALRQMAEAGPVNFGALDARLSEQGRALLHDIVAADEISDDAECLARAEACLQGLKTSFQRRRMEEVRARIRTAEREGNQDEALYWMAELQRVEEEVKRAGQPA*
Ga0132258_132650282	3300015371	Arabidopsis Rhizosphere	VPAVERILLNALLSSEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG*
Ga0210404_108082631	3300021088	Soil	EQILPRLTEELTAGFVSLEVIDALRLMAEAGAVHFGALDARLSEPGRGLLHDIVSADEISDDAEFLAKAEACLQGLKTSFQRRQTEEVRARIRTAEREGDLKEALHWMVELQRMEEEVKRDG
Ga0210408_114648901	3300021178	Soil	RAATDRHAPGQVSARHGSNPASGPVSNGATRVQVPAVERILLNSLLSSEATRGRILPQLPAELTAGFVSLEVIGTLRQMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAESLAQAEACLQGLKTSFQRRRMEDVRARIRTAEREGDLKEALHWMVELQRMEEEV
Ga0182009_102311301	3300021445	Soil	ILLNALLSSEATRQQILPQLPAELTAGFVSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR
Ga0207656_104490071	3300025321	Corn Rhizosphere	YLGVEPGLILEQFKKAATDRHAPGQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLHVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG
Ga0209483_12547301	3300025862	Arctic Peat Soil	VPQPQRAPLRIPALERILLNTLLSSEETRQQILPRLPAALTTGFISREVLDALRQMAEAGPVNFAALDARLSDAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRSQLDELRARVKTAGREGRSEEALHWTAELQRLEEEVKRDG
Ga0207642_105935802	3300025899	Miscanthus Rhizosphere	LPRLPAGVTAGVITREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRSQLDEVRARVKMEGREGRPEEALHSTAELQRLEEEVKRDG
Ga0207680_102844561	3300025903	Switchgrass Rhizosphere	LRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG
Ga0207654_110623771	3300025911	Corn Rhizosphere	TARIQVPAVERILLSTLLSSEHTRERILPQLAAELTAGFVSLEVMNALRQMAEAGSVNFAALDARLSEPGRALLHDIVAADEINDDGECLAQAEACLQGLKTSFRRRRMEEMRTRIRTAEREGNLKEAFHWMAELQRMEEEVKRDG
Ga0207695_112876121	3300025913	Corn Rhizosphere	QGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG
Ga0207671_105358551	3300025914	Corn Rhizosphere	LSSEETRQQILPRLPAALTAGFVSREVLDILRQMAEAGPVNFAALDARLSDAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRSQLDEVRARVKMAGREGRPEEALHWTAELQRLEEEVKRDG
Ga0207663_113364811	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PSELTAGFVSLEVIDALRQMAEAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG
Ga0207657_107351011	3300025919	Corn Rhizosphere	TAVQIPALERILLNTLLSSEETRQQILPRLPADLTAAFVTREVLDALRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRGQLDELRARVKTAGREGRSEEALHWTAELQRLEEEVKRDG
Ga0207652_104704662	3300025921	Corn Rhizosphere	TRQRILPQLPSELTAGFVSLEVIDALRQMAEAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRISFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG
Ga0207687_106788062	3300025927	Miscanthus Rhizosphere	SNGTPRVALPAVERILLNALLSSEATRQQILPQLPAELTAGFVSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR
Ga0207664_106680822	3300025929	Agricultural Soil	VQLPAVERILLNALLSSEDTRQRILPQLPSELTAGFVSLEVINALRQMAAAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG
Ga0207644_107260542	3300025931	Switchgrass Rhizosphere	DRHAPGQVASRQGASPATGPSTNGAPRVPVPAVERILLNALLSSEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG
Ga0207704_113872801	3300025938	Miscanthus Rhizosphere	ERILLNALLSSESTREQILPRLPAELTAGFVSLEIIGALRQMADAGPINFAALDARMSEPGRALLHEIVSADEISDEAECLAQAEACLQGLKTSFQRRQTEEVRTLIRTAEREGNLKEALHWMAELQRFEEEVKRDG
Ga0207711_110190581	3300025941	Switchgrass Rhizosphere	VERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG
Ga0207661_121430761	3300025944	Corn Rhizosphere	AVASDLAGYLGVEPGLILEQFKKAATDRHAPGQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIR
Ga0207677_106913762	3300026023	Miscanthus Rhizosphere	RLPAGLTAGFITREVLDTLRQMAEAGPVNFAALDARLSEAGRTLLHDIAAADEIGDDNECLAQADACLRRLQANFQRGQLDELRARVKMAGREGRSEEALHWTAELQRLEEEVKRDG
Ga0207703_123078412	3300026035	Switchgrass Rhizosphere	GAPRVQVPAVERILLNALLSSESTREQILPQLPAELTAGFVSLEIIGALRQMADAGPVNFAALDARMSEPGRALLHEIVAADEISDEAECLAQAEACLQGLKTSFQRRQTEEVRTLIRTAEREGNLKEALHWMAELQRFEEEVKRDGQ
Ga0207702_123334411	3300026078	Corn Rhizosphere	IDALRQMAEAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG
Ga0207641_107387941	3300026088	Switchgrass Rhizosphere	APTADSGLPTRNTSSAPSPSPASGRSSNGTPRVALPAVERILLNALLSSEATRQQILPQLPAELTAGFVSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR
Ga0207676_120995771	3300026095	Switchgrass Rhizosphere	GQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG
Ga0207698_106534742	3300026142	Corn Rhizosphere	MVQAQWKTVKLPYRESGINAAGKCELLEQFKKAATDRHAPGQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG
Ga0209073_100452702	3300027765	Agricultural Soil	VSLEVIGALRQMAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR
Ga0268264_103647371	3300028381	Switchgrass Rhizosphere	VEPGLILEQFKKAATDRHAPGQVGVRQGSSQASGPAANGTSRIQVPAVERILLNALLSSEATREQILPRLTPELATGFVSLEVIDVLRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEINDETECLAQAEACLQGLQVSFQRRRMEEVRGRIRTAERDGNMKEALHWMAELQRVEEEVKRDG
Ga0268264_125446751	3300028381	Switchgrass Rhizosphere	PRVPVPAVERILLNALLSSEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMAELQRVEEEVKRDR
Ga0311356_120757611	3300030617	Palsa	GQILPHLPAELTAGFVSLEVISALRQMAEAGAVNFAALDGRLSEPGRALLHDIVSADEISDDAECLARAEACLQGLKASSQRRRMEEMRARIRIAEREGNLKEALDWMTELQRVEEEVKRDG
Ga0170834_1077169461	3300031057	Forest Soil	AIREQILPQLPAELTAGFVSLEVIGALRQMAESGSVNFAALDARLSEPGRALLHDIVSADEIRDEAEFLAQAEACLQGLKTSFQRRRMEEMRARIRTAEREGDLKEALHWMAELQRVEEEVKHDG
Ga0170834_1139178851	3300031057	Forest Soil	REHDPVRAGAGFEQAGVSGQAVLDRGRVRVLRREPVIHRQGPAAGPSSKSAPRVQVPAVERILLNALLSSEGIREHILPELPAELTEGFVSLEIIDALRSMAEAGPVNFAALDARLSEPGRALLHDIVSAEEISDEAESLAQAEACLKGLRISFQRRQTEEVRARIRTAERDGNLKEALHWMTELQRVEEEVKRDG
Ga0170824_1199431061	3300031231	Forest Soil	AGYLGVEPGLVLEQFKRAATDRHAPGQVTSRHASSPASGASSNGASRVQVPAVERILLNALLSSEATRERILPQLSSELTAGFVSLEVIGALRQMAEAGSVNFAALDARLSEPGRALLHDIASADEISEEAECLAQAEACLQGLKTTFQRRRMEEVRSRIRTAERVGNLEEAFRWMTELQRMEEEVKRDGQQLSTGDAP
Ga0265339_102298631	3300031249	Rhizosphere	AAPQPKRAVVQIPALERILLNTLLSSEETRQQILPRLPVAMTTGFVTREVLDTLRQMAEAGPVNFAALDARLSDAGRTLLHDIAAADEIGDDNECLAQADACLRRLEANFQRSQLDELRTRVKTAGREGRSEEALHWTAELQRLEEEVKRDG
Ga0170818_1031626821	3300031474	Forest Soil	TDRHAPGQVTSRHASSPASGASSNGASRVQVPAVERILLNALLSSEATRERILPQLSSELTAGFVSLEVIGALRQMAEAGGVNFAALDARLSEPGRALLHDIASADEISEEAECLAQAEACLQGLKTTFQRRRMEEVRSRIRTAERVGNLEEAFRWMTELQRMEEEVKRDGQQL
Ga0310686_1066057712	3300031708	Soil	EAGPVHFAALDARLSEPGRALLHDIVAADEISDDADCLAQAEACLEGLKTSFQRRRTEEVRARIRTAEREGNLTEALHWMTELQRVEEEVKRDA
Ga0310686_1075433301	3300031708	Soil	SRGSSPASGASSNGSPRVQVPAVERILLNALLSSEATRERILPELPAELTAGFVSLEIIDALCHMAEAGPVNFAALDARLSEPARGLLHDIVSADEISDEAECLAQAEACLLGLKTSFQRRRMEEVRARIRSAERQGNSEEALHWMAELQRVEEEVKRDG
Ga0310813_111039321	3300031716	Soil	GYLGVEPGLILDQFKRAATDRHAPGQVASRPGASPVTGPSTNGAPRVPVPAVERILLNALLSSEAIREQILPQLPAELTTGFVSLEIIDALRHMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAEFLAQAEACLKGLKSSFQRRQMEEVRARIRTAEREGNLKEALHWMTELQRVEQEVKRDG
Ga0307468_1016394751	3300031740	Hardwood Forest Soil	LEVIDALRHMADAGPVDFAALDARLSEPGRALLHDIVAAEEISDEAECLAQAEACLQGLQTSFQRRRIEDVRVRIRTAEREGNLKEALHWMAELQRVEAEVKRDG
Ga0307478_102095792	3300031823	Hardwood Forest Soil	SSNGAARVQLPAVERILLNALLSSEFTRARILPQLPAELTAGFVSLEVIGALRQMAEAGPVNFGALDARLSEPGRALLHDIVSADEISDEAECLAQAEACLLGLKTSFQRRRMEEMRARIRTAERAGNPEEALHWMAELQRVEEEVKRDG
Ga0307479_105819251	3300031962	Hardwood Forest Soil	ATRVQVPAVERILLNALLSSEATRGRILPQLPAELTAGFVSLEVIGALRQMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAESLAQAEACLQGLKTSFQRRRMEDVRARIRTAEREGDLKEAIHWMVELQRMEEEVKRDG
Ga0307470_108197881	3300032174	Hardwood Forest Soil	ATDRHAPGHVGARRGSSPASGPSSNGASRVQVPAVERILLNALLSSEATREQILPQLPAELTAGFVSLEVIGALRQMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAECLAQAEACLQGLKTSFQRRQTEEVRARIRSAEREGNLKDALHWMAELQRVEEEVKRDG
Ga0307471_1008213902	3300032180	Hardwood Forest Soil	APGQVAARHGSSEGSSPTSGPSSNGASRVQVPAVERILLNALMSSEATRVRILPQLPAELTAGFVSLEVINALRQMAEAGPVNFAALDARLSEPGRALLHDIVSADEISDEAECLAQAEACLLGLQTSFQRRRMEEVRARIRTAEREGNPQEALHWMAELQRVEEEVKRDG
Ga0307472_1008280951	3300032205	Hardwood Forest Soil	RILPELPAELTAGFVSLEIIDALRHMAEAGSVNFAALDARLSEPGRALLHEIVSADEISDEAESLAQAEACLKGLRTSFQRRQTEEVRARIRTAEREGNLKEALHWMAELQRVEAEVKRD
Ga0310812_101547162	3300032421	Soil	GALRQIAEAGPFDFAALDARLSEPGRALLHDIVAADEISDEAECLAQAEACLQGLKTSFQRRRLEEVRSRIRNAEREGNPEEALHWMAELQRVEEEVKRDR
Ga0326726_114140211	3300033433	Peat Soil	VSHEVIGTLRQIAEAGPVNFGALDARLSEPGRALLHEIVSADEIDDGADYLAQAEACLQGLKTSFQRRRSEEMRARIRAAEREGNPEQALHWMAELQRAEEEVKRDG
Ga0310811_102037171	3300033475	Soil	VQLPAVERILLNALLSSEDTRQRILPQLPSELTAGFVSLEVIDALRQMAEAGPVNFAALDGRLSAPGRALLHDIVAADEISDDAECLAQAEACLQGLRTSFQRRRMEEVRTRIRTAEREGNPEEALHWMVELQRVEEEVKRDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099376

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences