NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099326

Metagenome / Metatranscriptome Family F099326

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099326
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 120 residues
Representative Sequence LENLRLRLGESVDFEVRGNCMRVLDHGGRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAERDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRRVAEVGR
Number of Associated Samples 51
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.02 %
% of genes near scaffold ends (potentially truncated) 26.21 %
% of genes from short scaffolds (< 2000 bps) 69.90 %
Associated GOLD sequencing projects 40
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment
(31.068 % of family members)
Environment Ontology (ENVO) Unclassified
(59.223 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Sediment (saline)
(33.981 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.48%    β-sheet: 28.19%    Coil/Unstructured: 50.34%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.87.1.2: Type 1 signal peptidased1b12a_1b120.53659
b.34.12.0: automated matchesd4kuia_4kui0.52044
b.43.3.2: Ribosomal protein L3d1vq8b11vq80.50979
c.55.3.5: DnaQ-like 3'-5' exonucleased2qxfa_2qxf0.50334


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF05402PqqD 8.74
PF00378ECH_1 8.74
PF04055Radical_SAM 4.85
PF13186SPASM 2.91
PF02036SCP2 2.91
PF00440TetR_N 2.91
PF12172DUF35_N 1.94
PF00909Ammonium_transp 1.94
PF00076RRM_1 0.97
PF14907NTP_transf_5 0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 103 Family Scaffolds
COG0004Ammonia channel protein AmtBInorganic ion transport and metabolism [P] 1.94


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003847|Ga0055582_1033729All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria872Open in IMG/M
3300003991|Ga0055461_10008723All Organisms → cellular organisms → Bacteria → Proteobacteria1987Open in IMG/M
3300004015|Ga0055462_10003456All Organisms → cellular organisms → Bacteria → Proteobacteria3280Open in IMG/M
3300004113|Ga0065183_10004572All Organisms → cellular organisms → Bacteria → Proteobacteria3422Open in IMG/M
3300004113|Ga0065183_10087210All Organisms → cellular organisms → Bacteria → Proteobacteria1161Open in IMG/M
3300005588|Ga0070728_10113770All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1600Open in IMG/M
3300005588|Ga0070728_10179687All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1198Open in IMG/M
3300005589|Ga0070729_10103521All Organisms → cellular organisms → Bacteria1735Open in IMG/M
3300005589|Ga0070729_10393263All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria769Open in IMG/M
3300005589|Ga0070729_10440977All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Rhodoferax → Rhodoferax ferrireducens718Open in IMG/M
3300005600|Ga0070726_10147454All Organisms → cellular organisms → Bacteria → Proteobacteria1215Open in IMG/M
3300005600|Ga0070726_10304796All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria804Open in IMG/M
3300005601|Ga0070722_10005116All Organisms → cellular organisms → Bacteria → Proteobacteria3652Open in IMG/M
3300005601|Ga0070722_10177223All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria867Open in IMG/M
3300005609|Ga0070724_10287149All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria721Open in IMG/M
3300005609|Ga0070724_10291558All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria715Open in IMG/M
3300005612|Ga0070723_10052107All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1631Open in IMG/M
3300005920|Ga0070725_10191685All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria888Open in IMG/M
3300006467|Ga0099972_10059854All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria788Open in IMG/M
3300006467|Ga0099972_11820069All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria615Open in IMG/M
3300009135|Ga0118736_10116634All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria755Open in IMG/M
3300009139|Ga0114949_10041014All Organisms → cellular organisms → Bacteria3415Open in IMG/M
3300010392|Ga0118731_100833780All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1046Open in IMG/M
3300010392|Ga0118731_101448316All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria542Open in IMG/M
3300010392|Ga0118731_101596869All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria740Open in IMG/M
3300010392|Ga0118731_104325215All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria729Open in IMG/M
3300010392|Ga0118731_105012278All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria633Open in IMG/M
3300010392|Ga0118731_105974418All Organisms → cellular organisms → Bacteria1711Open in IMG/M
3300010392|Ga0118731_108732675All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria798Open in IMG/M
3300010392|Ga0118731_110010250All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria626Open in IMG/M
3300010392|Ga0118731_113513898All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1046Open in IMG/M
3300010392|Ga0118731_113906628All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1353Open in IMG/M
3300010392|Ga0118731_114243952All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria548Open in IMG/M
3300010392|Ga0118731_115017775All Organisms → cellular organisms → Bacteria8051Open in IMG/M
3300010430|Ga0118733_100110398All Organisms → cellular organisms → Bacteria5531Open in IMG/M
3300010430|Ga0118733_100415116All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2668Open in IMG/M
3300010430|Ga0118733_101653155All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1276Open in IMG/M
3300010430|Ga0118733_101912645All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1180Open in IMG/M
3300010430|Ga0118733_102168114All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1103Open in IMG/M
3300010430|Ga0118733_103656274All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria832Open in IMG/M
3300010430|Ga0118733_104483226All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria745Open in IMG/M
3300010430|Ga0118733_109212529All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria508Open in IMG/M
3300010430|Ga0118733_109288885All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria506Open in IMG/M
3300020234|Ga0212227_1366510All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3415Open in IMG/M
3300021859|Ga0210334_11104345All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria519Open in IMG/M
3300022213|Ga0224500_10265438All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria624Open in IMG/M
3300022220|Ga0224513_10032711All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1915Open in IMG/M
3300022226|Ga0224512_10562078All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria554Open in IMG/M
3300022308|Ga0224504_10284466All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria685Open in IMG/M
3300022309|Ga0224510_10007375All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales5659Open in IMG/M
3300022413|Ga0224508_10000141All Organisms → cellular organisms → Bacteria → Proteobacteria75321Open in IMG/M
(restricted) 3300023112|Ga0233411_10217811All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria632Open in IMG/M
(restricted) 3300024517|Ga0255049_10059075All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1737Open in IMG/M
(restricted) 3300024519|Ga0255046_10005310All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4023Open in IMG/M
(restricted) 3300024528|Ga0255045_10048727All Organisms → cellular organisms → Bacteria1409Open in IMG/M
(restricted) 3300024529|Ga0255044_10454839All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria539Open in IMG/M
3300025555|Ga0210121_1045847All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria739Open in IMG/M
3300025883|Ga0209456_10005318All Organisms → cellular organisms → Bacteria → Proteobacteria5766Open in IMG/M
3300025883|Ga0209456_10007330All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4901Open in IMG/M
3300025883|Ga0209456_10054170All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1803Open in IMG/M
3300025883|Ga0209456_10104665All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1248Open in IMG/M
3300025895|Ga0209567_10004072All Organisms → cellular organisms → Bacteria6870Open in IMG/M
3300025895|Ga0209567_10370696All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria688Open in IMG/M
3300027758|Ga0209379_10182026All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria730Open in IMG/M
3300027790|Ga0209273_10051089All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1911Open in IMG/M
3300027820|Ga0209578_10179290All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1017Open in IMG/M
3300027820|Ga0209578_10186467All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria993Open in IMG/M
3300027820|Ga0209578_10500211All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria546Open in IMG/M
3300027828|Ga0209692_10358556All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria631Open in IMG/M
3300027845|Ga0209271_10005106All Organisms → cellular organisms → Bacteria → Proteobacteria5003Open in IMG/M
(restricted) 3300027868|Ga0255053_10224228All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria906Open in IMG/M
3300027917|Ga0209536_100105100All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3591Open in IMG/M
3300027978|Ga0209165_10068675All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1254Open in IMG/M
3300027978|Ga0209165_10109907All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria967Open in IMG/M
3300027980|Ga0209475_10401578All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria564Open in IMG/M
3300028598|Ga0265306_10003042All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria8161Open in IMG/M
3300028598|Ga0265306_10008205All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4998Open in IMG/M
3300028598|Ga0265306_10053011All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2017Open in IMG/M
3300028598|Ga0265306_10183646All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1105Open in IMG/M
3300028598|Ga0265306_10199057All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1061Open in IMG/M
3300028598|Ga0265306_10627937All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria592Open in IMG/M
3300028599|Ga0265309_10005971All Organisms → cellular organisms → Bacteria → Proteobacteria5768Open in IMG/M
3300028599|Ga0265309_10071990All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1984Open in IMG/M
3300028599|Ga0265309_10134648All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1499Open in IMG/M
3300028600|Ga0265303_10026900All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria3915Open in IMG/M
3300028600|Ga0265303_10091578All Organisms → cellular organisms → Bacteria2214Open in IMG/M
3300028600|Ga0265303_10116257All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1980Open in IMG/M
3300028600|Ga0265303_10491389All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria985Open in IMG/M
3300028600|Ga0265303_10492362All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria984Open in IMG/M
3300028600|Ga0265303_11192347All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria633Open in IMG/M
3300032136|Ga0316201_10012781All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria6921Open in IMG/M
3300032136|Ga0316201_10030883All Organisms → cellular organisms → Bacteria4609Open in IMG/M
3300032136|Ga0316201_10032247All Organisms → cellular organisms → Bacteria → Proteobacteria4516Open in IMG/M
3300032136|Ga0316201_10088127All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2703Open in IMG/M
3300032231|Ga0316187_10022437All Organisms → cellular organisms → Bacteria → Proteobacteria5211Open in IMG/M
3300032231|Ga0316187_10233211All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1416Open in IMG/M
3300032251|Ga0316198_10007781All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria6655Open in IMG/M
3300032251|Ga0316198_10638158All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria574Open in IMG/M
3300032252|Ga0316196_10151303All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1056Open in IMG/M
3300032259|Ga0316190_10069596All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2489Open in IMG/M
3300032262|Ga0316194_10104434All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1830Open in IMG/M
3300032273|Ga0316197_10004395All Organisms → cellular organisms → Bacteria10014Open in IMG/M
3300032273|Ga0316197_10024610All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria4102Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment31.07%
SedimentEnvironmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment14.56%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine13.59%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine8.74%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow6.80%
SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Sediment5.83%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment5.83%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.91%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.91%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.91%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.97%
SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Sediment0.97%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.97%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.97%
Marine SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Sediment0.97%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003847Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11EnvironmentalOpen in IMG/M
3300003991Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004015Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300004113Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (version 2)EnvironmentalOpen in IMG/M
3300005588Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1EnvironmentalOpen in IMG/M
3300005589Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2EnvironmentalOpen in IMG/M
3300005600Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1EnvironmentalOpen in IMG/M
3300005601Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1EnvironmentalOpen in IMG/M
3300005609Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1EnvironmentalOpen in IMG/M
3300005612Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2EnvironmentalOpen in IMG/M
3300005920Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2EnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300009135Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 382 cmbsfEnvironmentalOpen in IMG/M
3300009139Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N074 metaGEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300020234Deep-sea sediment microbial communities from the Kermadec Trench, Pacific Ocean - N074EnvironmentalOpen in IMG/M
3300021859Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022213Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022220Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_21EnvironmentalOpen in IMG/M
3300022226Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_13EnvironmentalOpen in IMG/M
3300022308Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24EnvironmentalOpen in IMG/M
3300022309Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022413Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_21EnvironmentalOpen in IMG/M
3300023112 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MGEnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300024528 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23EnvironmentalOpen in IMG/M
3300024529 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21EnvironmentalOpen in IMG/M
3300025555Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025883Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11 (SPAdes)EnvironmentalOpen in IMG/M
3300025895Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027758Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1 (SPAdes)EnvironmentalOpen in IMG/M
3300027790Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes)EnvironmentalOpen in IMG/M
3300027820Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027828Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027845Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027868 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_22EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027978Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 (SPAdes)EnvironmentalOpen in IMG/M
3300027980Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1 (SPAdes)EnvironmentalOpen in IMG/M
3300028598Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160420 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028599Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300028600Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)EnvironmentalOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M
3300032231Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1EnvironmentalOpen in IMG/M
3300032251Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxicEnvironmentalOpen in IMG/M
3300032252Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cmEnvironmentalOpen in IMG/M
3300032259Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2EnvironmentalOpen in IMG/M
3300032262Coastal sediment microbial communities from Maine, United States - Cross River sediment 1EnvironmentalOpen in IMG/M
3300032273Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A oxicEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0055582_103372923300003847Pelagic MarineMQILVNGESVAVRRQRFYLPGDVVVVRRCDHWNAHRFLGYALSVHGVVALTQADEAVRRDPAALVTAVVGRAECGVTVRDRVTALGKYARALLHRLIEGGRWAP*
Ga0055461_1000872343300003991Natural And Restored WetlandsACGTVTRQMSGGRSSLMSLGLQPGESVDFVVCGDCMRGVDHGDSVPVRKQRVYLPGDVVVVRRRDHWSAHRFLGYAPSMHGIVALTQADEAAERDPAALVGAIVGRAQRGVSSFDRIAALCRYARALVIRLAEGRR*
Ga0055462_1000345613300004015Natural And Restored WetlandsMSLGLQPGESVDFVVCGDCMRGVDHGDSVPVRKQRVYLPGDVVVVRRRDHWSAHRFLGYAPSMHGIVALTQADEAAERDPAALVGAIVGRAQRGVSSFDRIAALCRYARALVIRLAEGRR
Ga0065183_1000457233300004113Pelagic MarineVKLGLQLGEHVDFTVRGECMRGLGSGRSVRVRRQRIYLPGDVVVVRRCDHWNAHRFLGYAPTARGIVALTQADDARERDPAASTDAIVGRAQCGVATSERLRAFGRYARALIRQVGEASR
Ga0065183_1008721023300004113Pelagic MarineMYGGRRSLGNLGLRLGESMDFSIRGDCMQIFDDGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVVLTQADDAAERDPATLAGAIVGRAQCEVAVSDRTAALGKYARALVRRVAELGR*
Ga0070728_1011377023300005588Marine SedimentMRGGRRSLANLGLRLGESVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRVAEVGQWAS*
Ga0070728_1017968713300005588Marine SedimentLENLRLRLGESVDFEVRGNCMRVLDHGGRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAGRDPAALASAIVGRAQCGVTASDRVTAVGKYARALIRRIAEVGR*
Ga0070729_1010352123300005589Marine SedimentMRGGRRSLANLGLRLGESVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRVAEVGQWAP*
Ga0070729_1039326323300005589Marine SedimentRGAGVAPLIWWAPLMQGGRSSLENLRLRLGESVDFEVRGNCMRVLDHGVRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAERDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRRVAEVGR*
Ga0070729_1044097713300005589Marine SedimentMQGGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVMRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGRVAEVGR*
Ga0070726_1014745423300005600Marine SedimentMQGGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVMRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRRVAEVGR*
Ga0070726_1030479623300005600Marine SedimentLTNVGLRHGESVNFTVRGNCMQILVNGESVAVRRQRLYLPGDVVVVRRRDHWNAHRFLGYALGVHGVVALTQADEAVRRDPAALVRAIVGRAECGVTLPDRVTALGRYARAVLLRMTEGSSWAP*
Ga0070722_1000511653300005601Marine SedimentRSLANLGLRLGESVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRVAEVGQWAP*
Ga0070722_1017722323300005601Marine SedimentLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVMRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGRVAEVGR*
Ga0070724_1028714923300005609Marine SedimentLANLGLRLGESVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRVAEVGQWAS*
Ga0070724_1029155823300005609Marine SedimentGNCMQVLVNGESVAVRRQRFYLPGDVVIVRRRDHWNAHRFLGYALGVHGVVALTQADEAVGRDPAALVRAIVGRAECGVTLPDRVTALGRYARAVLLRMTEGSSWAR*
Ga0070723_1005210713300005612Marine SedimentMRGGRSSLANVGLRHGESVNFTVRGDCMQILANGECVAVRRQRFYLPGDVVVMRRRDHWNAHRFLGYALGVHGVVALTQADEAVRRDPAALVRAIVGRAECGVTLPDRVTALGRYARAVLLRMTEGSSWAP*
Ga0070725_1019168523300005920Marine SedimentMQGGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGRVAEVGR*
Ga0099972_1005985423300006467MarineLENLRLRLGESVDFEVRGNCMRVLDHGGRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAERDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRRVAEVGR*
Ga0099972_1182006913300006467MarineMHGGRRSLANLGLRLGESVDFAIRGDCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADEASERDPAALVSAIAGRAQCEVAVSDRTAALKKYAWALIRRVAEVGQWAL*
Ga0118736_1011663413300009135Marine SedimentCMRVLDHGVRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAGRDPAALASAIVGRAQCGVTASDRVTAVGKYARALIRRIAEVGR*
Ga0114949_1004101423300009139Deep SubsurfaceMQGGQSSLANLGLRLGESVAFTVRGECMQGLESGRSVRVCKQRIYLPGDVVVVRRRDHWNTHRFLGYAATIRGIVALTQADDAGERDPAAPARAVVGRVQCEVTALERVAACGKYARVLIRRVAEAGR*
Ga0118731_10083378013300010392MarineMQGGRSSLENLRLRLGESVDFEVRGNCMRVLDHGVRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAGRDPAALASAIVGRAQCGVTASDRVTAVGKYARALIRRIAEVGR*
Ga0118731_10144831613300010392MarineVNFTVRGNCMQILVNGESVAVRRQRFYLPGDVVVVRRRDHWNAHRFLGYALGVHGVVALTQTDEAPRRDPAALATAIVGRAECGVTVPDRVTALGRYGRALLQRLIEGGRWAP*
Ga0118731_10159686923300010392MarineLANVGLRHGESVNFTVRGNCMQSLANGESVAVRRQRFYLPGDVVVARRRDHWNAHRFLGYALGAHGVIVLTQADEAVRRDPAALVRAVVGRAECGVTVRDRVTALRKYARALLHRLIEGGRWAP*
Ga0118731_10432521513300010392MarineMQGGGSSLENLRLRLGESVDFEVRGNCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYALSVHGVVALTQADETAERDPAALASAIVGRAQCGVTASDR
Ga0118731_10501227813300010392MarineLANLGLRLGESAEFAVRGGCMKAFRNGESVRVRRQRMYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQADDAAERDPAALASAIVGRAQCEVRTSDRLAAFSDYARAMIRRVAGVG
Ga0118731_10597441813300010392MarineLGEFVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRV
Ga0118731_10873267523300010392MarineMQGGWSSLANLGVRRGESVAFAIRGDCMPVLGNGESVCVQRQRFYVPGDVIIVRRRDHWNAHRFLGYAPSLHGFVALTQADDAAERDPAALASAIVGRARCKVSISDRLAALGKYGHALIRRLTKVER*
Ga0118731_11001025023300010392MarineGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVMRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGRVAEVGR*
Ga0118731_11351389823300010392MarineMQILANGECVAVRRQRFYLPGDVVVMRRRDHWNAHRFLGYALGVHGVVALTQADEAVRRDPAALVRAIVGRAECGVTVRDRVTALGRYGRALLQRLIEGGRWAP*
Ga0118731_11390662813300010392MarineVNFTVRGNCMQVLVNGESVAVRRQRFYLPGDVVIVRRRDHWNAHRFLGYALGVHGVIALTQADEAVRRDPAALVRAIVGRAECGVTLPDRVTALGRYARAVLLRMTEGSSWAR*
Ga0118731_11424395213300010392MarineLENLRLRLGESVDFEVRGNCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAERDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRR
Ga0118731_11501777533300010392MarineLGLRLGESVDFAIRGDCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADEASERDPAALVSAIAGRAQCEVAVSDRTAALKKYAWALIRRVAEVGQWAL*
Ga0118733_10011039853300010430Marine SedimentLRFGESIDFTVRGACMPNLTSGEVLRVRRRFFYLPGDVVVVRRRDHWNVHRFLGYAPTMRGVVALTQADDGNERDPVAPASSIVGRAQCGVTASQRLTAFAKFARALIRRVVEAGR*
Ga0118733_10041511623300010430Marine SedimentLGLRLGESVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRVAEVGQWAS*
Ga0118733_10165315513300010430Marine SedimentVNFTVRGNCMQVLVNGESVAVRRQRFYLPGDVVIVRRRDHWNAHRFLGYALGVHGVVALTQADEAVRRDPAALVRAIVGRAECGVTLPDRVTALGRYARAVLLRMTEGSSWAR*
Ga0118733_10191264513300010430Marine SedimentMQGGGSSLENLRLRLGESVDFEVRGNCMRVLDHGGRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYALSVHGVVALTQADETAERDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRRVAEVGR*
Ga0118733_10216811423300010430Marine SedimentLANVGLRHGESVNFTVRGDCMQILANGECVAVRRQRFYLPGDVVVMRRRDHWNAHRFLGYALGVHGVVALTQADEAVRRDPAALVRAIVGRAECGVTVRDRVTALGRYGRALLQRLIEGGRWAP*
Ga0118733_10365627423300010430Marine SedimentIWWAPLMQGGRSSLENLRLRLGESVDFEVRGNCMRVLDHGVRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAGRDPAALASAIVGRAQCGVTASDRVTAVGKYARALIRRIAEVGR*
Ga0118733_10448322623300010430Marine SedimentIWWAPLMQGGRSSLENLRLRLGESVDFEVRGNCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDTAERDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRRVAEVGR*
Ga0118733_10921252913300010430Marine SedimentGDCMRVVDHGASVRVRRQRFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVVLTHADDAAERDPAAPATAIVGRAQCGVAASDRVAAFAKYARALIRKVAEVGR*
Ga0118733_10928888513300010430Marine SedimentGAGTSPLIWLRPLMQRGRSSLKSLGLRVGESVDFAVRGDCMQVLDDGASMPVRRQRLYVPGDVVVVRRRDHWTAHRFLGYAPSVHGVVALTQADDAAQRDPAALASAIVGRAQCPVGTLDRVAALGKFGRALIRRVAGIRR*
Ga0212227_136651023300020234SedimentMQGGQSSLANLGLRLGESVAFTVRGECMQGLESGRSVRVCKQRIYLPGDVVVVRRRDHWNTHRFLGYAATIRGIVALTQADDAGERDPAAPARAVVGRVQCEVTALERVAACGKYARVLIRRVAEAGR
Ga0210334_1110434513300021859EstuarineLKSLGLRPGETVQFQVRGACMQILSNGDSVQVRRQRFYVPGDVVVVRRRDYWDAHRFLGYAPSVRGVVALTQADRAVARDPAAPVSAIVGRAHCAVAARDRVAALGR
Ga0224500_1026543813300022213SedimentMGGGYSSLKSLGLRPGETVQFQVRGACMQILSNGDSVQVRRQRFYVPGDVVVVRRRDYWDAHRFLGYAPSVRGVVALTQADRAVARDPAAPVSAIVGRAHCAVAARDRVAALGRYVQALLRRMAEVVR
Ga0224513_1003271133300022220SedimentLASLGLGHGESVKFSIRGECMRSISDGQSVQVRRQRLYLPGDVIVVRRRDDWNAHRFLGYAPSVHGLVALTQSDDAAKRDPAALASAIVGRATCEVRASDRLSALGKYARAMILRVAGVG
Ga0224512_1056207813300022226SedimentLKSLGLRPGETVQFQVRGACMQILSNGDSVQVRRQRFYVPGDVVVVRRRDYWDAHRFLGYAPSVRGVVALTQADRAVARDPAAPVSAIVGRAHCAVAARDRVAALGRYVQALLRRMAEV
Ga0224504_1028446623300022308SedimentLANVGLRHGESVNFMVRGDCIRILVNGESVAVRRQRFYLPGDVVVVRRRDHWNAHRFLGYALGVHGVVALTQADEAVRRDPAALVRAVVGRVECGVTVPDRATALGRYARAVLHRLIEGGGWAL
Ga0224510_1000737573300022309SedimentMQILSNGDSVQVRRQRFYVPGDVVVVRRRDYWDAHRFLGYAPSVRGVVALTQADRAVARDPAAPVSAIVGRAHCAVAARDRVAALGRYVQALLRRMAEVVR
Ga0224508_10000141143300022413SedimentVKFSIRGECMRSISDGQSVQVRRQRLYLPGDVIVVRRRDDWNAHRFLGYAPSVHGLVALTQSDDAAKRDPAALASAIVGRATCEVRASDRLSALGKYARAMILRVAGVGR
(restricted) Ga0233411_1021781113300023112SeawaterMQGGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYALSVHGVVALTQADESAQRDPASLVNAIVGRAECGVTASDRVAAFGKYVRALIGWVAEVGR
(restricted) Ga0255049_1005907533300024517SeawaterMRGGRSSLADLGLWLGASVHFAVRGDCMRVLDDGASVRVRRQRLYLPGDVVVVRRRDHWNAHRFLGYAPSVHGIVALTQADDAPERDPAAPMSAIVGRAQCRVAATDRVAALGKYARALIRRAAEVGR
(restricted) Ga0255046_1000531053300024519SeawaterMQGGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVVRRSDHWNAHRFLGYALSVHGVVALTQADESAQRDPASLVNAIVGRAECGVTASDRVAAFGKYVRALIGWVAEVGR
(restricted) Ga0255045_1004872743300024528SeawaterLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVVRRSDHWNAHRFLGYALSVHGVVALTQADESAQRDPASLVNAIVGRAECGVTASDRVAAFGKYVRALIGWVAEVG
(restricted) Ga0255044_1045483913300024529SeawaterLTNVGLRHGESVNFTVRGNCMQILVNGESVAVRRQRFYLPGDVVIVRRRDHWNAHRFLGYALGVHGVVALTQADEAVGRDPAALVRAIVGRAECGVTLPDRVTALGRY
Ga0210121_104584723300025555Natural And Restored WetlandsLMSLGLQPGESVDFVVCGDCMRGVDHGDSVPVRKQRVYLPGDVVVVRRRDHWSAHRFLGYAPSMHGIVALTQADEAAERDPAALVGAIVGRAQRGVSSFDRIAALCRYARALVIRLAEGR
Ga0209456_1000531863300025883Pelagic MarineMQILVNGESVAVRRQRFYLPGDVVVVRRCDHWNAHRFLGYALSVHGVVALTQADEAVRRDPAALVTAVVGRAECGVTVRDRVTALGKYARALLHRLIEGGRWAP
Ga0209456_1000733083300025883Pelagic MarineMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAERDPAALASAIVGRTTCEVRASDRLSALGKYARAMILRVAGVGR
Ga0209456_1005417013300025883Pelagic MarineLGLRLGESMDFSIRGDCMQIFDDGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVVLTQADDAAERDPATLAGAIVGRAQCEVAVSDRTAALGKYARALVRRVAELGR
Ga0209456_1010466513300025883Pelagic MarineLASLGLGHGESVEFSVRGECMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAERDPAALASTIVGRATCEVRASDRLSALGKYARAMILRVSGVG
Ga0209567_10004072103300025895Pelagic MarineMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAERDPAALASTIVGRATCEVRASDRLSALGKYARAMILRVSGVGR
Ga0209567_1037069613300025895Pelagic MarineVGAAALVWLATQMQGGWSSLTNLGVRPGESVAFAIRGDCMPVLGNGESVRVQRQRLYVPGDVVIVRRRDHWNAHRFLGYAPSRHGVVALTQADDATERDPAALASAIVGRARCKVSISDRLAALGKYGHALIRRLTKVER
Ga0209379_1018202623300027758Marine SedimentNFTVRGNCMQVLVNGESVAVRRQRFYLPGDVVIVRRRDHWNAHRFLGYALGVHGVVALTQADEAVRRDPAALVRAIVGRAECGVTLPDRVTALGRYARAVLLRMTEGSSWAR
Ga0209273_1005108913300027790Marine SedimentMQGGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRRVAEVGR
Ga0209578_1017929013300027820Marine SedimentMRGGRRSLANLGLRLGESVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRVAEVGQWAS
Ga0209578_1018646713300027820Marine SedimentLENLRLRLGESVDFEVRGNCMRVLDHGGRVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADETAERDPAALASAIVGRAQCGVTASDRVTAVGKYARALIRRIAEVG
Ga0209578_1050021113300027820Marine SedimentLANLGLRLGESVDFAVCGDCMRVVDHGASVRVRRQRFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDAAERDPAALATAIVGRAQCGVAASDRMA
Ga0209692_1035855613300027828Marine SedimentLANLGLRLGESVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRVAEVGQWAP
Ga0209271_1000510673300027845Marine SedimentMQGGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVMRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGRVAEVGR
(restricted) Ga0255053_1022422813300027868SeawaterLANLGLRLGESVDFAVRGECMWGFDSSGSVRVRKQRIYLPGDVVVVRRLDHWNAHRFLGYAPTVRGIVALTQADDDAERDPAAPARAIVGRAQCGVTAWERVAACGKYARALICRVAEVG
Ga0209536_10010510023300027917Marine SedimentMQGGRSSLASLGLGYGESVEFSVRGECMRAFGDGQSVQVRRQRLYLPGDVIVVRRRNHWNAHRFLGYAPSVRGPVALTQSDDSAERDPAALARAIVGRIICDVRALDRLAALGKYARAMTLKVAGVAR
Ga0209165_1006867523300027978Marine SedimentLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYFPGDVVVMRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGRVAEVG
Ga0209165_1010990723300027978Marine SedimentMQGGRSSLENLRLRLGESVDFEVRGNCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYALSVHGVVALTQADETAERDPAALASAIVGRAQCGVTASDRVTAFGKYARALIRRVAEVGR
Ga0209475_1040157813300027980Marine SedimentLANLGLRLGESVDFAIRGNCMQVFDSGESVRVRRQRFYLPGDVVVVRRRDHWNAHRFLGYAPSFHGVVALTHADDATERDPAAPVSAIAGRAQCDVAVSDRTAALGKYALALIRRVAEVG
Ga0265306_1000304283300028598SedimentMRAFRDGESVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQADDAAERDPAALASAIVGRAQCGVRPSDRLAALGNYARSIIRRVAKGAR
Ga0265306_1000820553300028598SedimentVEFSVRGDCMRAFKDGQSVEVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAKRDPAALASAIVGRAKCEVGTSDRLNALWKYTHAVIQRVAGVGR
Ga0265306_1005301133300028598SedimentMQGGQSSLASLGLGLGHGESVDFSVRGECMRAFKDGQSVEVRRQWLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAERDPAAHVGAIVGRVISEVRPSDRLTALGKYARAMVLRAAGAGR
Ga0265306_1018364613300028598SedimentLASLGLGHGESVEFSIRGECMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAERDPAALASAIVGRTTCEVRASDRLSALGKYARAMILRVAGVG
Ga0265306_1019905723300028598SedimentLAGLGLGHGESLEFSVRGECMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDAAAERDPAALASAIVGRARCEVRASDRLAALGKYARAMILRVAGVG
Ga0265306_1062793723300028598SedimentASALVWSIRRMQGGRSSLASLGLGHGESVEFSVRGECMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVQGLVALTQSDAAAQRDPAALASAIVGRATCEVRASDRLSALGKYARAMILRVAGVGR
Ga0265309_1000597143300028599SedimentLAGLGLGHGESLEFSVRGECMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAASVHGLVALTQADDAAHRDPAALASAIVGRARCEVRASDRLAALGKYARAMILRVAGVG
Ga0265309_1007199033300028599SedimentMQGGQSSLASLGLGHGEPVEFSVRGDCMRAFKDGQSVEVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAKRDPAALASAIVGRAKCEVGTSDRLNALWKYTHAVIQRVAGVGR
Ga0265309_1013464823300028599SedimentVEFSIRGECMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAERDPAALASAIVGRTTCEVRASDRLSALGKYARAMILRVAGVGR
Ga0265303_1002690033300028600SedimentMQGGQSSLAGLGLGHGESLEFSVRGECMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAASVHGLVALTQADDAAHRDPAALASAIVGRARCEVRASDRLAALGKYARAMILRVAGVGR
Ga0265303_1009157813300028600SedimentMGGDRSSLVKLGLQLGEHVDFTVRGECMRGLGSGRSVRVRRQRIYLPGDVVVVRRCDHWNAHRFLGYAPTARGIVALTQADDARERDPAASTDAIVGRAQCGVATSERLRAFGRYARALIRQVGEASR
Ga0265303_1011625733300028600SedimentMQILVNGESVAVRRQRLYLPGDVVVVRRRDHWNAHRFLGYALGVHGVIALTQADEAVRRDPAALVRAIVGRAECGVTVGDRVTALGRYARALLHRPIEGGRWAP
Ga0265303_1049138923300028600SedimentLASLGLGLGHGESVDFSVRGECMRAFKDGQSVEVRRQWLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAERDPAAHVGAIVGRVISEVRPSDRLTALGKYARAMVLRAAGAGR
Ga0265303_1049236213300028600SedimentVASLGLGHGESVEFSVRGECMRSIGDGQSVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDAAAQRDPAALASAIVGRATCEVRASDRLSALGKYARAMILRVAGVG
Ga0265303_1119234713300028600SedimentLASLGLGHGESMEFSVRGECMRAFKDGQSLEVRRQWLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDASERDPAARAGAIVGRVRCEVRPSDRLTALGKYARAMVL
Ga0316201_1001278163300032136Worm BurrowLASLGLGLGESVGFRVRGRCMRTLGDGQWVHVRRQRIYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLLALTQSDDGAQRDPAALSSAIVGRATCEVRVSDRLAALLKYGRAVILRITGAL
Ga0316201_1003088333300032136Worm BurrowVEFSVRGACMRSIGDGESVRVRRQRLYLPGDVIVLRRRDHWNAHRFLGYAPSVHGLLALTQSDDAAKRDPAAHVSAIVGRVASEVRPSDRLTALAKYARAMALRAAGVSR
Ga0316201_1003224743300032136Worm BurrowMANLGLQLGESVDFAIRGSCMNAFGDGASVRVRRQRVYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLLILTQADDAAERDPAALANAIVGRAQCETRVSDRLAALGKYALAMIRKVAELG
Ga0316201_1008812723300032136Worm BurrowMRAFRDGESVQVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLLALTQADDAVERDPAALASAIVGRAQCEVRPSDRLAALGKYARSMIRRVTKGAR
Ga0316187_1002243753300032231Worm BurrowLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADEAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGWVAEVG
Ga0316187_1023321113300032231Worm BurrowMRGGQSSIANLGLQLGESVDFAIRGSCMNAFGDGASVRVRRQRVYLPGDVVVVRRRDHWNAHRFLGYAPSVHGLLILTQADDAAERDPAALANAIVGRAQCETRVSDRLAALGKYALAMIRRVAELGP
Ga0316198_1000778153300032251SedimentMRSIGDGESVHVRRQRLYLPGDVIVVRCRDHWNAHRFLGYAPSVHGLVALTQSDDGAKRDPAAHVSAIVGRVTSEVRPSDRLTALAKYARAMALRAAGVSR
Ga0316198_1063815813300032251SedimentMANLGLQLGESVDFAIRGSCMNAFGDGASVRVRRQRVYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLLILTQADDAAERDPAALANAIVGRAQCETRVSDRLAALRKYALAMIRKVAELG
Ga0316196_1015130313300032252SedimentLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFDLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADDAAQRDPAALASAIVGRAQCGVTASDRVTAFRKYARALIRRVAEVG
Ga0316190_1006959613300032259Worm BurrowGRSSLENLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADEAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGWVAEVGR
Ga0316194_1010443443300032262SedimentLTLRLGESVDFEVRGDCMRVLDHGARVPVRRERFYLPGDVVVVRRSDHWNAHRFLGYAPSVHGVVALTQADEAAQRDPAALVSAIVGRAECGVTASDRVAAFGKYVRALIGWVAEVGR
Ga0316197_1000439543300032273SedimentMANLVLQLGESVDFAIRGSCMKAFGDGASVRVRRQRVYLPGDVVVVRRRDHWNAHRFLGYAPSVHGLLVLTQADDAAERDPAALASAIVGRAQCETRVSDRLAALGNYALAMIRKAAELG
Ga0316197_1002461013300032273SedimentLASLGLGHGESVEFSVRGACMRSIGDGESVHVRRQRLYLPGDVIVVRRRDHWNAHRFLGYAPSVHGLVALTQSDDAAKRDPAAHVSAIVGRLTSEVRPSDRLTALAKYARAMALRAAGVS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.