Metagenome / Metatranscriptome Family F099303

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Overview

Basic Information
Family ID	F099303
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	88 residues
Representative Sequence	MNFIEFTYTKADGTESKRAVLPLVGPTKFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPEQMSDITTDYV
Number of Associated Samples	73
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	35.92 %
% of genes near scaffold ends (potentially truncated)	25.24 %
% of genes from short scaffolds (< 2000 bps)	61.17 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (74.757 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (18.447 % of family members)
Environment Ontology (ENVO)	Unclassified (46.602 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (54.369 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.81% β-sheet: 16.95% Coil/Unstructured: 54.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF02229	PC4	13.59
PF00301	Rubredoxin	4.85
PF01653	DNA_ligase_aden	3.88
PF00533	BRCT	1.94
PF01612	DNA_pol_A_exo1	1.94
PF03120	DNA_ligase_OB	1.94
PF00574	CLP_protease	1.94
PF10263	SprT-like	0.97
PF09722	Xre_MbcA_ParS_C	0.97
PF02915	Rubrerythrin	0.97
PF01364	Peptidase_C25	0.97
PF03851	UvdE	0.97
PF09825	BPL_N	0.97
PF13946	DUF4214	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	5.83
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.88
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	3.88
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.94
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.55 %
Unclassified	root	N/A	18.45 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	81.55 %
Unclassified	root	N/A	18.45 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	74.76 %
Unclassified	root	N/A	18.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.80 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	74.76 %
Unclassified	root	N/A	18.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.80 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	74.76 %
Unclassified	root	N/A	18.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.80 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	74.76 %
Unclassified	root	N/A	18.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.80 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	72.82 %
Unclassified	root	N/A	18.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.80 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	72.82 %
Unclassified	root	N/A	18.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352005\|2199972023	Not Available	11659	Open in IMG/M
3300000756\|JGI12421J11937_10000936	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11685	Open in IMG/M
3300001275\|B570J13894_1000064	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13342	Open in IMG/M
3300003277\|JGI25908J49247_10011632	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2725	Open in IMG/M
3300003277\|JGI25908J49247_10012831	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2582	Open in IMG/M
3300003277\|JGI25908J49247_10026423	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1679	Open in IMG/M
3300003388\|JGI25910J50241_10001317	Not Available	8765	Open in IMG/M
3300004096\|Ga0066177_10164407	Not Available	894	Open in IMG/M
3300004124\|Ga0066178_10012831	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1807	Open in IMG/M
3300004763\|Ga0007746_1044746	All Organisms → Viruses → Predicted Viral	4032	Open in IMG/M
3300004763\|Ga0007746_1425455	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1774	Open in IMG/M
3300004763\|Ga0007746_1425534	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1974	Open in IMG/M
3300004786\|Ga0007753_1324972	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	768	Open in IMG/M
3300004797\|Ga0007764_11673400	Not Available	1196	Open in IMG/M
3300005582\|Ga0049080_10151609	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	777	Open in IMG/M
3300005584\|Ga0049082_10037398	Not Available	1700	Open in IMG/M
3300005662\|Ga0078894_10074203	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2946	Open in IMG/M
3300005662\|Ga0078894_10317645	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1412	Open in IMG/M
3300005662\|Ga0078894_11595267	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	539	Open in IMG/M
3300005758\|Ga0078117_1006017	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	27103	Open in IMG/M
3300006484\|Ga0070744_10014127	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2368	Open in IMG/M
3300006484\|Ga0070744_10154660	Not Available	657	Open in IMG/M
3300006484\|Ga0070744_10246516	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	505	Open in IMG/M
3300006641\|Ga0075471_10005560	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8060	Open in IMG/M
3300007550\|Ga0102880_1167933	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	574	Open in IMG/M
3300007559\|Ga0102828_1111934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	669	Open in IMG/M
3300007562\|Ga0102915_1057113	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1286	Open in IMG/M
3300007606\|Ga0102923_1032363	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1643	Open in IMG/M
3300007644\|Ga0102902_1047432	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1286	Open in IMG/M
3300007706\|Ga0102899_1183525	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	526	Open in IMG/M
3300007860\|Ga0105735_1093479	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	630	Open in IMG/M
3300007973\|Ga0105746_1327747	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	533	Open in IMG/M
3300007992\|Ga0105748_10063097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1446	Open in IMG/M
3300007992\|Ga0105748_10403425	Not Available	590	Open in IMG/M
3300007992\|Ga0105748_10536384	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	513	Open in IMG/M
3300008107\|Ga0114340_1033948	Not Available	6132	Open in IMG/M
3300008107\|Ga0114340_1135626	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	929	Open in IMG/M
3300008113\|Ga0114346_1066308	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2184	Open in IMG/M
3300008113\|Ga0114346_1079101	All Organisms → Viruses → Predicted Viral	1555	Open in IMG/M
3300008119\|Ga0114354_1044301	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1926	Open in IMG/M
3300008119\|Ga0114354_1075852	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1381	Open in IMG/M
3300008120\|Ga0114355_1130594	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	927	Open in IMG/M
3300008258\|Ga0114840_1007486	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1893	Open in IMG/M
3300008258\|Ga0114840_1013540	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1388	Open in IMG/M
3300008962\|Ga0104242_1069588	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	587	Open in IMG/M
3300008996\|Ga0102831_1205521	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	651	Open in IMG/M
3300009051\|Ga0102864_1047628	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1158	Open in IMG/M
3300009159\|Ga0114978_10049370	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2913	Open in IMG/M
3300009182\|Ga0114959_10002251	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16081	Open in IMG/M
3300010354\|Ga0129333_10006561	Not Available	11009	Open in IMG/M
3300010354\|Ga0129333_10008979	Not Available	9451	Open in IMG/M
3300010354\|Ga0129333_10057224	Not Available	3641	Open in IMG/M
3300010354\|Ga0129333_11736529	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	507	Open in IMG/M
3300011011\|Ga0139556_1008205	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1510	Open in IMG/M
3300011011\|Ga0139556_1054961	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	592	Open in IMG/M
3300011268\|Ga0151620_1026627	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1989	Open in IMG/M
3300011268\|Ga0151620_1134726	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	764	Open in IMG/M
3300012012\|Ga0153799_1012531	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1826	Open in IMG/M
3300012348\|Ga0157140_10000338	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5802	Open in IMG/M
3300012665\|Ga0157210_1005382	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2611	Open in IMG/M
3300012968\|Ga0129337_1466636	All Organisms → Viruses → Predicted Viral	1091	Open in IMG/M
3300012970\|Ga0129338_1404340	Not Available	764	Open in IMG/M
3300012970\|Ga0129338_1486713	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	966	Open in IMG/M
3300013372\|Ga0177922_10839840	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1123	Open in IMG/M
3300017766\|Ga0181343_1014517	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2488	Open in IMG/M
3300019207\|Ga0180034_1113351	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	733	Open in IMG/M
3300019784\|Ga0181359_1000652	Not Available	8102	Open in IMG/M
3300019784\|Ga0181359_1107894	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1012	Open in IMG/M
3300020141\|Ga0211732_1123328	All Organisms → Viruses → Predicted Viral	2771	Open in IMG/M
3300020151\|Ga0211736_10985524	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1147	Open in IMG/M
3300020205\|Ga0211731_10233770	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3034	Open in IMG/M
3300020205\|Ga0211731_11167959	Not Available	836	Open in IMG/M
3300020513\|Ga0208090_1013953	All Organisms → Viruses → Predicted Viral	1238	Open in IMG/M
3300020562\|Ga0208597_1012835	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2125	Open in IMG/M
3300020562\|Ga0208597_1013598	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2040	Open in IMG/M
3300021140\|Ga0214168_1078487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	732	Open in IMG/M
3300021956\|Ga0213922_1007001	Not Available	3316	Open in IMG/M
3300021961\|Ga0222714_10006698	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10703	Open in IMG/M
3300021961\|Ga0222714_10050185	All Organisms → Viruses → Predicted Viral	2897	Open in IMG/M
3300021961\|Ga0222714_10204927	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1136	Open in IMG/M
3300021963\|Ga0222712_10035816	Not Available	3857	Open in IMG/M
3300021963\|Ga0222712_10051980	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3053	Open in IMG/M
3300021963\|Ga0222712_10113636	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1874	Open in IMG/M
3300024346\|Ga0244775_10016675	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6785	Open in IMG/M
3300024346\|Ga0244775_10061109	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3252	Open in IMG/M
3300024346\|Ga0244775_10080556	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2781	Open in IMG/M
3300024346\|Ga0244775_11037732	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	645	Open in IMG/M
3300025732\|Ga0208784_1019513	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2215	Open in IMG/M
3300026566\|Ga0256334_1145055	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	539	Open in IMG/M
3300027193\|Ga0208800_1049908	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	568	Open in IMG/M
3300027525\|Ga0208437_1137991	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	549	Open in IMG/M
3300027563\|Ga0209552_1146465	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	609	Open in IMG/M
3300027586\|Ga0208966_1070547	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	978	Open in IMG/M
3300027659\|Ga0208975_1002225	Not Available	7761	Open in IMG/M
3300027708\|Ga0209188_1047673	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1923	Open in IMG/M
3300027744\|Ga0209355_1034773	All Organisms → Viruses → Predicted Viral	2519	Open in IMG/M
3300031857\|Ga0315909_10004196	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17120	Open in IMG/M
3300032093\|Ga0315902_10785223	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	756	Open in IMG/M
3300033980\|Ga0334981_0172781	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1022	Open in IMG/M
3300034018\|Ga0334985_0003568	Not Available	12599	Open in IMG/M
3300034022\|Ga0335005_0000243	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	43379	Open in IMG/M
3300034107\|Ga0335037_0144710	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1298	Open in IMG/M
3300034272\|Ga0335049_0408900	Not Available	887	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.11%
Marine	Environmental → Aquatic → Marine	36.89%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	29.13%
Lake	Environmental → Aquatic → Freshwater → Lake	26.21%
Coastal	Environmental → Aquatic → Marine → Coastal	13.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.62%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.68%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.94%
River	Environmental → Aquatic → Freshwater → River	0.97%
Creek	Environmental → Aquatic → Freshwater → Creek	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	26.21%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	22.33%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.59%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.62%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	10.68%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.83%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.94%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.97%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	18.45%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	10.68%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	8.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.74%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	6.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.83%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.85%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	4.85%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.88%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.88%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.91%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.94%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.94%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.97%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.97%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.97%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352005	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001275	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003388	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004124	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (version 2)	Environmental	Open in IMG/M
3300004763	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004786	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004797	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300007860	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3um	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012348	Freshwater microbial communities from Coldwater Creek, Ontario, Canada - S44	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300019207	Estuarine microbial communities from the Columbia River estuary - R.871 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020513	Freshwater microbial communities from Lake Mendota, WI - 20JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021140	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026566	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027525	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027744	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033980	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME09Aug2015-rr0007	Environmental	Open in IMG/M
3300034018	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034272	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2017-rr0156	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200182507	2199352005	Freshwater	MKFVEFTYTKADGSQSKRAIIELVTPTKHIEGIDVTSLSQDDFADFCREFSALKAEQHTQTMEKLAQFDLKHNYRKFIPEQMADITTDYV
JGI12421J11937_100009362	3300000756	Freshwater And Sediment	MNFIEFTYTKADGTKSKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPEKMSDITTDYV*
B570J13894_100006412	3300001275	Freshwater	MKFVEFTYTKADGSQSKRAIIELVTPTKHIEGIDVTSLSQDDFADFCREFSALKAEQHTQTMEKLAQFDLKHNYRKFIPEQMADITTDYV*
JGI25908J49247_100116326	3300003277	Freshwater Lake	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFXALKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV*
JGI25908J49247_100128313	3300003277	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
JGI25908J49247_100264233	3300003277	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGXDVSQMPEDEFVVFCRDFSTLKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
JGI25910J50241_1000131712	3300003388	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSTLKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0066177_101644073	3300004096	Freshwater Lake	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFSAMKNDHHNQVMEKLAQFDLRHNYRKFNPENMSDVTTDYV*
Ga0066178_100128312	3300004124	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSTLKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYI*
Ga0007746_10447464	3300004763	Freshwater Lake	MNFLEFTYTKADGTESKRAAIPLFGPTKFVEAIDVSQMPEDEFAVFCREFSALKSSQHEQTMAILAQFDLKHNYRKFNPEQMSDITTDYV*
Ga0007746_14254553	3300004763	Freshwater Lake	MNFLEFTYTKADGTESKRAAIPLFGPTKFVEAIDVTSLTESDFADFCREFSAMKNDHHNQVMEKLAQFDLRHNYRRFNPEQMSDVTTDYV*
Ga0007746_14255343	3300004763	Freshwater Lake	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFSALKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV*
Ga0007753_13249721	3300004786	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSTLKSAQHEQTMAMLEQFDLKHN
Ga0007764_116734004	3300004797	Freshwater Lake	EFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFGAMKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV*
Ga0049080_101516091	3300005582	Freshwater Lentic	MNFLEFTYTKADGTESKRAAIPLFGPTKFVEAIDVSQMPEDEFAVFCREFSALKSSQHEQTMAILAQFDLKHN
Ga0049082_100373981	3300005584	Freshwater Lentic	QSKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0078894_100742034	3300005662	Freshwater Lake	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFSALKNDHHNQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV*
Ga0078894_103176453	3300005662	Freshwater Lake	MNFLEFTYTKADGTESKRAAIPLFGPTKFVEAIDVSQMPEDEFAVFCREFSALKSAQHEQTMAILAQFDLKHNYRKFNPEQMSDITTDYV*
Ga0078894_115952671	3300005662	Freshwater Lake	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLTESDFADFCREFSAMKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV*
Ga0078117_100601767	3300005758	Lake Water	MKLIEFTYTKNDGSQSNRAVIELQQPCKYVEGIDVSQMPEHEFADFCREFSLMKAAQHDETMRLLEQFDLKHNYRRFIPEQMQSVKTDYV*
Ga0070744_100141275	3300006484	Estuarine	MNFIEFTYTKTDGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSALKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSNITTDYV*
Ga0070744_101546601	3300006484	Estuarine	SKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFSALKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV*
Ga0070744_102465161	3300006484	Estuarine	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVTFCRDFSALKSAQHDQTMAMLEQFDLKHNYRRFIPEQMSDITTDYV*
Ga0075471_1000556021	3300006641	Aqueous	MKLIEFTYTKSDGSQSERAIIELQQPCKYVEGIDVSQMPEQAFADFCREFSLMKTAQHDETMRLLEQFDLKHNYRRFIPEQMQSVKADYV*
Ga0102880_11679331	3300007550	Estuarine	ERLNMNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0102828_11119342	3300007559	Estuarine	MNFIEFTYTKADGTESKRAVLPLVGPTNFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKNNYRRFIPAQMSDITTDYV*
Ga0102915_10571134	3300007562	Estuarine	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRR
Ga0102923_10323635	3300007606	Estuarine	DMNFIEFTYTKADGTESKRAVLPLVGPTKFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0102902_10474321	3300007644	Estuarine	IEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0102899_11835251	3300007706	Estuarine	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMS
Ga0105735_10934791	3300007860	Estuary Water	MNFIEFTYTKTDGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSTLKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0105746_13277471	3300007973	Estuary Water	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVSQMPEDEFADFCREFSALKSTQHEETMAMLEQFDLKHNYRR
Ga0105748_100630972	3300007992	Estuary Water	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAHHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0105748_104034252	3300007992	Estuary Water	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLTESDFADFCREFSAMKNDHHNQVMEKLAQYDLRHNYRKFNPELMSDVTTDYA*
Ga0105748_105363841	3300007992	Estuary Water	MNFLEFTYTKADGTVSERAAIPLFGPTKFVEAIDVTSLTESDFADFCREFSAMKNDHHNQVMEKLAQYDLRHNYRKFNPDNMSNVTTEYV*
Ga0114340_103394812	3300008107	Freshwater, Plankton	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFGAMKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV*
Ga0114340_11356262	3300008107	Freshwater, Plankton	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVSQMPEDEFADFCREFSALKSTQHEETMAMLEQFDLRHNYRKFNPENMSDVTTDYV*
Ga0114346_10663087	3300008113	Freshwater, Plankton	MKLVEFTYIKTDGSTSQRAVVELVQPTQFFEGIDVSHMGHDELAEFCSEFGAMKAAQHEQTLSLLNQFDLKHNYRRFIPEKMASVQTDYV*
Ga0114346_10791011	3300008113	Freshwater, Plankton	MKLVEFTYIKTDGSTSQRAVVELVKPTQFFEGIDVSHMGHDELAEFCSEFGAMKAAQHEQTLSLLNQFDLKHNYRRFTPEKMASVQTDYV*
Ga0114354_10443014	3300008119	Freshwater, Plankton	MNFIEFTYTKADGTQSKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0114354_10758521	3300008119	Freshwater, Plankton	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFSALKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSDVT
Ga0114355_11305943	3300008120	Freshwater, Plankton	MNFIEFTYTKADGTQSKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPEQMTDITTDYV*
Ga0114840_10074863	3300008258	Freshwater, Plankton	MNFIEFTYTKADGTESKRAVLPLVGPTKFVEGIDVSQMPEDEFVVFCREFSALKSAQHEQTMAILEQFDLKHNYRRFIPEQMTDITTDYV*
Ga0114840_10135401	3300008258	Freshwater, Plankton	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSTLKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDI
Ga0104242_10695882	3300008962	Freshwater	MKLIEFTYTKTDGSKSERAVVELVQPTKYVEGIDVTQMPEQEFADFCREFSLMKAAQHEETMRLLEQFDLKHNYRRFIPEQMQAVTADYV*
Ga0102831_12055211	3300008996	Estuarine	MNFIEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVSQMPEDQFADFCREFSALKLTQHEETMAMLEQFDLRHNYRKFNPDNMSNVTTDYV*
Ga0102864_10476281	3300009051	Estuarine	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVSQMPEDQFADFCREFSALKLTQHEETMAMLEQFDLRHNYRKFNPELMSDVTTDYA*
Ga0114978_100493704	3300009159	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTKFVEGIDVSQMPEDEFAVFCREFSALKSAQHEQTMAILEQFDLKHNYRRFIPEQMTDITTDYV*
Ga0114959_1000225118	3300009182	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTKFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPEQMSDITTDYV*
Ga0129333_100065618	3300010354	Freshwater To Marine Saline Gradient	MKLIEFTYTKADGTQSDRAVIELVQPTKYVEGIDVSQMPADEFAQFCAEFSAMKSAQHQQTQALLEQFDLKHNYRRFIPEQMQSVSTDYV*
Ga0129333_1000897912	3300010354	Freshwater To Marine Saline Gradient	MKLIEFTYTKSDGSQTDRAVIELQQPCKYVEGIDVSQMPEQEFADFCREFSLMKAAQHDETMRLLEQFDLKHNYRRFIPEQMQSVKTDYV*
Ga0129333_1005722410	3300010354	Freshwater To Marine Saline Gradient	MKLIQFTYTKSDGSKSERAIIETLQPNKYVEGIDISQMPEDEFAKFCQEFTSMKAAQHNETMALLEQFDLKHNYRRFIPEQMESVETDYV*
Ga0129333_117365291	3300010354	Freshwater To Marine Saline Gradient	MKLVEFTYIKTDGSTSQRAVVELVQPTQFFEGIDVSHMGHDELAEFCSEFGAMKAAQHEQTQALLNEFDLKHNYRRFIPEKMASVQTDYV*
Ga0139556_10082051	3300011011	Freshwater	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKH
Ga0139556_10549613	3300011011	Freshwater	YTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0151620_10266273	3300011268	Freshwater	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFGALKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV*
Ga0151620_11347262	3300011268	Freshwater	MKFLEFTYTKADGTESSRAVIELVTPTQFVEGIDVTSLSESDFADFCREFSALKQDHHNQTMEKLAQYDLRHNYRRFIPEQMSDVTTDYV*
Ga0153799_10125311	3300012012	Freshwater	KRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSTLKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV*
Ga0157140_100003388	3300012348	Freshwater	MKFLEFTYTKADGTQSKRAVIELVTPTQFVEGIDVSGLDQDSFADFCREFSALKADQHNQTMEKLAQYDLKHSYRRFIPEQMSDVTHDYV*
Ga0157210_10053828	3300012665	Freshwater	MKFVEFTYTKADGSQSKRAIIELVTPTKHIEGIDVTSLDQDDFANFCREFSALKAEQHTQTMEKLAQFDLKHNYRKFIPDNMSDITT
Ga0129337_14666361	3300012968	Aqueous	GNHTMKLIEFTYTKSDGSQTDRAVIELQQPCKYVEGIDVSQMPEQEFADFCREFSLMKAAQHDETMRLLEQFDLKHNYRRFIPEQMQSVKTDYV*
Ga0129338_14043403	3300012970	Aqueous	MKLVEFTYIKTDGSTSQRAVVELVQPTQFFEGIDVSHMGHDELAEFCSEFGAMKAAQHEQTQALLNEFDLKHNYR
Ga0129338_14867131	3300012970	Aqueous	ISFHKPQETKVMKLIEFTYTKADGTQSDRAVIELVQPTKYVEGIDVSQMPADEFAQFCAEFSAMKSAQHQQTQALLEQFDLKHNYRRFIPEQMQSVSTDYV*
Ga0177922_108398403	3300013372	Freshwater	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSALKSAQHEQTMAMLAQFDLKHNYRRFIPEQMSNITTDYV*
Ga0181343_10145172	3300017766	Freshwater Lake	MNFLEFTYTKADGTVSKRAAIPLFGPTKFIEAIDVTSLSESDFADFCREFSALKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV
Ga0180034_11133511	3300019207	Estuarine	DMNFIEFTYTKTDGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSALKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSNITTDYV
Ga0181359_100065210	3300019784	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV
Ga0181359_11078942	3300019784	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSTLKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV
Ga0211732_11233286	3300020141	Freshwater	MNFLEFTYTKADGTESKRAAIPLFGPTKFVEAIDVSQMPEDEFAVFCREFSALKSAQHEQTMAILEQFDLKHNYRKFNPEQMSDITTDYV
Ga0211736_109855242	3300020151	Freshwater	MNFLEFTYTKADGTESKRAAIPLFGPTKFVEAIDVSQMPEDEFAVFCREFSALKSAQHEQTMAILEQFDLKHNYRRFIPEKMSNITTDYV
Ga0211731_102337703	3300020205	Freshwater	MNFIEFTYTKADGTESKRALLPLVGPTTFVEGIDVSQMPEDEFVTFCRDFSELKSTQHEQTMAMLAKFDLKHNYRRFIPEQMSDITTDYV
Ga0211731_111679591	3300020205	Freshwater	MNLLEFTYTKADGTESKRAAIPLFGPTKFVEAIDVSQMPEDEFAVFCREFSALKSAQHEQTMAILAQFDLKHNYRKFNPEQMSDITTDYV
Ga0208090_10139531	3300020513	Freshwater	MKLIEFTYTKADGTQSDRAVIELVQPTKYVEGIDVSQMPADEFAQFCAEFSAMKSAQHQQTQALLEQFDLKHNYRRFIPEQMQSVSTDYV
Ga0208597_10128355	3300020562	Freshwater	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLTESDFADFCREFSAMKNDHHNQVMEKLAQYDLRHNYRKFNPELMSDVTTDYA
Ga0208597_10135985	3300020562	Freshwater	MTKERHDMNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSALKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSNITTDYV
Ga0214168_10784873	3300021140	Freshwater	MKFLEFTYTKADGTQSKRAVIELVTPTQFVEGIDVSGLDQDSFADFCREFSALKADQHNQVMEKLAQYDLKHNYRRFIPEQMSDVTHDYV
Ga0213922_10070012	3300021956	Freshwater	MKLVEFTYTKSDSSTSTRAVIELVQPTKFFEGIDVSHMTNDELAEFCSEYSTLKQEQHLATNNLLQKFDLKHNYRRFIPEQMTSVQTDYV
Ga0222714_1000669819	3300021961	Estuarine Water	MNFIEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVSQMPEDQFADFCREFSALKLTQHEETMAMLEQFDLKHNYRKFNPDNMSNVTTDYV
Ga0222714_100501855	3300021961	Estuarine Water	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFGAMKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV
Ga0222714_102049273	3300021961	Estuarine Water	MNFIEFTYTKADGTQSKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV
Ga0222712_100358164	3300021963	Estuarine Water	MKFLEFTYTKADGTTSKRAVIELVTPTKHIEGIDVSHLTESDFAEFCREFSALKADQHNQTMAKLAEFDLKHNYRRFIPENMSEVTSDYV
Ga0222712_100519803	3300021963	Estuarine Water	MKFLEFTYTKADGTTSKRAVIELVAPSKHLEGIDVTSLSESDFADFCREFAALKADQHNQTMEKLAQFDLRHNYRKFIPEQMSDITQDYV
Ga0222712_101136363	3300021963	Estuarine Water	MKFLEFTYTKTDGSQSKRAVIELVTPTQFVEGIDVSELDQDSFADFCREFAALKADQHNQTMEKLAQFDLRHNYRRFIPEQMSDVTHDYV
Ga0244775_100166757	3300024346	Estuarine	MNFLEFTYTKADGTESKRAAIPLFGPTKFVEAIDVSQMPEDEFAVFCREFSALKSAQHEQTMAILAQFDLKHNYRKFNPEQMSDITTDYV
Ga0244775_100611093	3300024346	Estuarine	MNFIEFTYTKTDGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSALKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSNITTDYV
Ga0244775_1008055610	3300024346	Estuarine	MNFIEFTYTKADGTESKRAVLPLVGPTNFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKNNYRRFIPAQMSDITTDYV
Ga0244775_110377322	3300024346	Estuarine	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVTFCRDFSALKSAQHDQTMAMLEQFDLKHNYRRFIPEQMSDITTDYV
Ga0208784_10195136	3300025732	Aqueous	MKLIEFTYTKSDGSQSERAIIELQQPCKYVEGIDVSQMPEQAFADFCREFSLMKTAQHDETMRLLEQFDLKHNYRRFIPEQMQSVKADYV
Ga0256334_11450551	3300026566	Freshwater	IEFTYTKSDGSQSERAVIELQQPCKYVEGIDVSQMPEQDFADFCREFSLLKTAQHDETMRLLEQFDLKHNYRRFIPEQMQSVKADYV
Ga0208800_10499081	3300027193	Estuarine	MNFIEFTYTKTDGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSALKSAQHEQTMAMLEQFDLKHNYRRF
Ga0208437_11379912	3300027525	Estuarine	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTD
Ga0209552_11464651	3300027563	Freshwater Lake	TKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV
Ga0208966_10705472	3300027586	Freshwater Lentic	MNFIEFTYTKADGTESKRAVLPLVGPTKFVEGIDVSQMPEDEFVVFCREFSALKSAQHEQTMAILEQFDLKHNYRRFIPEQMTDITTDYV
Ga0208975_100222511	3300027659	Freshwater Lentic	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFSAMKNDHHNQVMEKLAQFDLRHNYRKFNPENMSDVTTDYV
Ga0209188_10476737	3300027708	Freshwater Lake	MNFIEFTYTKADGTESKRAVLPLVGPTKFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPEQMSDITTDYV
Ga0209355_10347732	3300027744	Freshwater Lake	MNFLEFTYTKADGTESKRAAIPFVEAIDVSQMPEDEFAVFCREFSALKSSQHEQTMAILAQFDLKHNYRKFNPEQMSDITTDYV
Ga0315909_1000419610	3300031857	Freshwater	MNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFGALKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV
Ga0315902_107852231	3300032093	Freshwater	LNLRKKDKTMNFLEFTYTKADGTVSKRAAIPLFGPTKFVEAIDVTSLSESDFADFCREFGAMKNDHHTQVMEKLAQYDLRHNYRKFNPDNMSNVTTDYV
Ga0334981_0172781_245_517	3300033980	Freshwater	MKLVEFTYIKTDGSTSQRAVVELVKPTQFFEGIDVSHMGHDELAEFCSEFGAMKAAQHEQTQALLNEFDLKHNYRRFIPEKMASVQTDYV
Ga0334985_0003568_5456_5728	3300034018	Freshwater	MNFLEFTYTKADGTQSKRAVVPLVNPTKFVEGIDVSQMSEDEFAVFCREFSALKSAQHEQTMAVLEQFDLKHNYRRFIPEQMSDITTDHV
Ga0335005_0000243_21381_21653	3300034022	Freshwater	MNFIEFTYTKTDGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSAMKSAQHEQTMAMLEQFDLKHNYRRFIPAQMSNITTDYV
Ga0335037_0144710_751_1023	3300034107	Freshwater	MNFIEFTYTKADGTESKRAVLPLVGPTTFVEGIDVSQMPEDEFVVFCRDFSALKSTQHEQTMAMLEQFDLKHNYRRFIPAQMSDITTDYV
Ga0335049_0408900_538_810	3300034272	Freshwater	MNFLEFTYTKADGTVSERAAIPLFGPTKFVEAIDVTSLSESDFADFCREFGAMKNDHHNQVMEKLAQYDLRHNYRKFNPENMSNVTTDYV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099303

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences