Metagenome / Metatranscriptome Family F099249

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099249
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	146 residues
Representative Sequence	ALADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG
Number of Associated Samples	92
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.12 %
% of genes near scaffold ends (potentially truncated)	52.43 %
% of genes from short scaffolds (< 2000 bps)	76.70 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.359 % of family members)
Environment Ontology (ENVO)	Unclassified (27.184 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.631 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.45% β-sheet: 15.60% Coil/Unstructured: 26.95%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04199	Cyclase	31.07
PF00296	Bac_luciferase	11.65
PF07746	LigA	8.74
PF12172	DUF35_N	3.88
PF02900	LigB	1.94
PF04392	ABC_sub_bind	0.97
PF00005	ABC_tran	0.97
PF01955	CbiZ	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	31.07
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	11.65
COG1865	Adenosylcobinamide amidohydrolase	Coenzyme transport and metabolism [H]	0.97
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	71.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	11.65 %
Unclassified	root	N/A	1.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	71.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11.65 %
Unclassified	root	N/A	1.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	71.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.71 %
Unclassified	root	N/A	1.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	70.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.94 %
Unclassified	root	N/A	1.94 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	70.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.94 %
Unclassified	root	N/A	1.94 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	70.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.94 %
Unclassified	root	N/A	1.94 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10987394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1070	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10988629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1063	Open in IMG/M
3300000955\|JGI1027J12803_106604517	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	818	Open in IMG/M
3300000956\|JGI10216J12902_104347746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1524	Open in IMG/M
3300002908\|JGI25382J43887_10033097	All Organisms → cellular organisms → Bacteria	2796	Open in IMG/M
3300002908\|JGI25382J43887_10172154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1074	Open in IMG/M
3300004633\|Ga0066395_11040593	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300005167\|Ga0066672_10210569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1241	Open in IMG/M
3300005171\|Ga0066677_10536294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	671	Open in IMG/M
3300005178\|Ga0066688_10356967	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	946	Open in IMG/M
3300005181\|Ga0066678_10052760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2324	Open in IMG/M
3300005186\|Ga0066676_10169637	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1384	Open in IMG/M
3300005294\|Ga0065705_10406063	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	876	Open in IMG/M
3300005363\|Ga0008090_15475541	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	784	Open in IMG/M
3300005367\|Ga0070667_101409991	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	654	Open in IMG/M
3300005445\|Ga0070708_100068587	All Organisms → cellular organisms → Bacteria	3188	Open in IMG/M
3300005445\|Ga0070708_100482532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1169	Open in IMG/M
3300005446\|Ga0066686_10599526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	749	Open in IMG/M
3300005447\|Ga0066689_10369515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	896	Open in IMG/M
3300005467\|Ga0070706_100428830	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1230	Open in IMG/M
3300005467\|Ga0070706_101287851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300005468\|Ga0070707_100088078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3003	Open in IMG/M
3300005536\|Ga0070697_101117675	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300005536\|Ga0070697_101123701	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	700	Open in IMG/M
3300005540\|Ga0066697_10042086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2567	Open in IMG/M
3300005546\|Ga0070696_100617652	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	875	Open in IMG/M
3300005555\|Ga0066692_10117637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1598	Open in IMG/M
3300005556\|Ga0066707_10022562	All Organisms → cellular organisms → Bacteria	3368	Open in IMG/M
3300006032\|Ga0066696_10171128	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300006034\|Ga0066656_10565941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300006578\|Ga0074059_10827190	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300006844\|Ga0075428_101094220	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	842	Open in IMG/M
3300006845\|Ga0075421_100207922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2419	Open in IMG/M
3300006847\|Ga0075431_100989962	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	808	Open in IMG/M
3300006854\|Ga0075425_100282112	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300006880\|Ga0075429_100067812	All Organisms → cellular organisms → Bacteria	3105	Open in IMG/M
3300006903\|Ga0075426_10707261	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	756	Open in IMG/M
3300006903\|Ga0075426_10825261	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	698	Open in IMG/M
3300006904\|Ga0075424_100012173	All Organisms → cellular organisms → Bacteria	8580	Open in IMG/M
3300006904\|Ga0075424_101853685	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300006914\|Ga0075436_100417700	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	973	Open in IMG/M
3300007076\|Ga0075435_100479116	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1075	Open in IMG/M
3300009137\|Ga0066709_101834428	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	848	Open in IMG/M
3300009147\|Ga0114129_10156927	All Organisms → cellular organisms → Bacteria	3111	Open in IMG/M
3300009147\|Ga0114129_11121346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	984	Open in IMG/M
3300010336\|Ga0134071_10049357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1905	Open in IMG/M
3300010366\|Ga0126379_11261769	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	845	Open in IMG/M
3300010366\|Ga0126379_12175669	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	656	Open in IMG/M
3300010400\|Ga0134122_10650149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	982	Open in IMG/M
3300012205\|Ga0137362_10028362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4407	Open in IMG/M
3300012208\|Ga0137376_10418885	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1163	Open in IMG/M
3300012399\|Ga0134061_1329615	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	798	Open in IMG/M
3300012582\|Ga0137358_10825199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	614	Open in IMG/M
3300012918\|Ga0137396_10004993	All Organisms → cellular organisms → Bacteria	7667	Open in IMG/M
3300012922\|Ga0137394_10312018	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1343	Open in IMG/M
3300015358\|Ga0134089_10052465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1489	Open in IMG/M
3300015371\|Ga0132258_10884952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2254	Open in IMG/M
3300015372\|Ga0132256_100080985	All Organisms → cellular organisms → Bacteria	3107	Open in IMG/M
3300016387\|Ga0182040_10347753	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1149	Open in IMG/M
3300016404\|Ga0182037_10471410	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1048	Open in IMG/M
3300017656\|Ga0134112_10247351	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	707	Open in IMG/M
3300017947\|Ga0187785_10404696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	657	Open in IMG/M
3300018058\|Ga0187766_10275219	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1084	Open in IMG/M
3300018468\|Ga0066662_10817010	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	906	Open in IMG/M
3300025910\|Ga0207684_10030689	All Organisms → cellular organisms → Bacteria	4574	Open in IMG/M
3300025910\|Ga0207684_10081620	All Organisms → cellular organisms → Bacteria → Proteobacteria	2751	Open in IMG/M
3300025922\|Ga0207646_10648151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	946	Open in IMG/M
3300025922\|Ga0207646_10675958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	924	Open in IMG/M
3300026297\|Ga0209237_1165782	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	814	Open in IMG/M
3300026298\|Ga0209236_1089918	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1403	Open in IMG/M
3300026309\|Ga0209055_1001286	All Organisms → cellular organisms → Bacteria	16716	Open in IMG/M
3300026315\|Ga0209686_1228174	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300026328\|Ga0209802_1012677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4891	Open in IMG/M
3300026332\|Ga0209803_1159644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	865	Open in IMG/M
3300026333\|Ga0209158_1072781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1352	Open in IMG/M
3300026334\|Ga0209377_1072367	Not Available	1480	Open in IMG/M
3300026342\|Ga0209057_1019135	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3905	Open in IMG/M
3300026532\|Ga0209160_1181608	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300027821\|Ga0209811_10004577	All Organisms → cellular organisms → Bacteria	4445	Open in IMG/M
3300027909\|Ga0209382_10882456	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	943	Open in IMG/M
3300028536\|Ga0137415_10007829	All Organisms → cellular organisms → Bacteria	10597	Open in IMG/M
3300031719\|Ga0306917_10695790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M
3300031720\|Ga0307469_10106709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1985	Open in IMG/M
3300031723\|Ga0318493_10173735	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1127	Open in IMG/M
3300031736\|Ga0318501_10237667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	961	Open in IMG/M
3300031751\|Ga0318494_10202967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1130	Open in IMG/M
3300031771\|Ga0318546_10113246	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1794	Open in IMG/M
3300031781\|Ga0318547_10977677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300031796\|Ga0318576_10610445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300031798\|Ga0318523_10137090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1214	Open in IMG/M
3300031846\|Ga0318512_10280035	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	827	Open in IMG/M
3300031880\|Ga0318544_10349826	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300031893\|Ga0318536_10463200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300031912\|Ga0306921_10291502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1911	Open in IMG/M
3300031945\|Ga0310913_10629656	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	760	Open in IMG/M
3300032009\|Ga0318563_10526244	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300032090\|Ga0318518_10633974	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300032174\|Ga0307470_10394713	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	976	Open in IMG/M
3300032180\|Ga0307471_102740979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	625	Open in IMG/M
3300032205\|Ga0307472_101363682	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	686	Open in IMG/M
3300032770\|Ga0335085_10274169	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2014	Open in IMG/M
3300033433\|Ga0326726_10099829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.52%
Host-Associated	Host-Associated	17.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.52%
Plants	Host-Associated → Plants	17.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.94%
Peat	Environmental → Terrestrial → Peat	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.08%
Loam	Environmental → Terrestrial → Soil → Loam	14.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.36%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.97%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_109873942	3300000363	Soil	GVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRVALLRVKRTATTELVVRARIKSRIGVGTSASDRPVRRARSG*
ICChiseqgaiiFebDRAFT_109886292	3300000363	Soil	RLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRVALLRVKRTATTELVVRARIKSRIGVGTSASDRPVRRARSG*
JGI1027J12803_1066045171	3300000955	Soil	GSADWGHLGQLEGRVTILLIVATGLLLLIGLIAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQHTAKAELAVRARIKSRIGVTRTAPNRPIRTTRSG*
JGI10216J12902_1043477462	3300000956	Soil	MLVTSLLHSTRVGLGIVLPTLVLALTTHGWAQSPDDSRGGVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTAKVRVPFWRGSPVTIRVFGEVPSSELKRVALLRVKRTATTELAVRARIKSRIGVGTSASDRPIRRARSG*
JGI25382J43887_100330972	3300002908	Grasslands Soil	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTTRWG*
JGI25382J43887_101721541	3300002908	Grasslands Soil	RPAVRTTRATVARLAIAVPTLVLALGGRGWAQAHPDAGRASDAIRLEEPVALLLIGAVGLLLLLALIXKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIRRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0066395_110405932	3300004633	Tropical Forest Soil	LEGPVAVVLILAAGLVLLIALLAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSD*
Ga0066672_102105692	3300005167	Soil	VTAQTLADAARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTTRWG*
Ga0066677_105362941	3300005171	Soil	VTAQTLADAARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0066688_103569672	3300005178	Soil	VTAQTLADAARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISEALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKQAALRRVKRTATAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0066678_100527602	3300005181	Soil	VTAQTLADAARAAGSTRLEASVTLLLIGTVGVLLLLAVIAKVLDLRLKRDGEVIAVKGVISEALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKQAALRRVKRTATAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0066676_101696372	3300005186	Soil	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVIADALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0065705_104060632	3300005294	Switchgrass Rhizosphere	MRVTSLLRSARVGFGIVLPTLVLALTTHGWGQSPDDSTGGVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRAALLRVKRTATTELAVRARIKSRIGVGTSASDRPVRRARSG*
Ga0008090_154755411	3300005363	Tropical Rainforest Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIALLAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRTRVKSRIGVTPARPSRPIRTTRSG*
Ga0070667_1014099911	3300005367	Switchgrass Rhizosphere	LLLIGLIAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQRTAKSELVVRARIKSRIGVTRAAPNRDLIRARTTSSDLAVRWTRRSAACLSSP
Ga0070708_1000685873	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTAQTLADAARAAGSPRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTTRWG*
Ga0070708_1004825322	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRDKLVTSCASHRHASAGGTPVPRRPAVRTTRATVARLVIALPTLVLALAGRGWAQAQPDAGRASDAIRLEEPVALLLIGAVGLLLLLALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIRRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0066686_105995262	3300005446	Soil	VTAQALADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVIADALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0066689_103695152	3300005447	Soil	TLVLALGGRGWAQAHPDAGRASDAIRLEEPVALLLIGAVGLLLLLALITKVLELRLKRDGEVIAVKGVISDALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0070706_1004288301	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RDKLVTSCASHRHASAGGTPVPRRPAVRTTRATVARLVIALPTLVLALAGRGWAQAQPDAGRASDAIRLEEPVALLLIGAVGLLLLLALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIRRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0070706_1012878511	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0070707_1000880782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPTLVLALAGRGWAQAQPDAGRASDAIRLEEPVALLLIGAVGLLLLLALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIRRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0070697_1011176752	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TSCASHRHASAGGTPVPRRPAVRTTRATVARLVIALPTLVLALAGRGWAQAQPDAGRASDAIRLEEPVALLLIGAVGLLLLLALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIRRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0070697_1011237011	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTSQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTTRWG*
Ga0066697_100420862	3300005540	Soil	VTAQTLADVARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISEALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKQAALRRVKRTATAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0070696_1006176521	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	QTAGGSADWGHLGRLEGRVTILLIVATGLLLLIGLIAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQRTAKSELVVRARIKSRIGVTRAAPNRPIRTTRSG*
Ga0066692_101176372	3300005555	Soil	VPTLVLALGGRGWAQAHPDAGRASDAIRLEEPVALLLIGAVGLLLLLALITKVLELRLKRDGEVIAVKGVISDALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0066707_100225622	3300005556	Soil	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPRASRRLLRTTRWG*
Ga0066696_101711282	3300006032	Soil	VTAQTLADAARAAGSTRLEASVTLLLIGTVGLLLLLALIAKVLELRLKRDGEVIAVKGVISEALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKQAALRRVKRTATAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0066656_105659411	3300006034	Soil	VTAQTLADVARAAGSTRLEASVTLLLIGTVGLLLLLALIAKVLELRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASR
Ga0074059_108271902	3300006578	Soil	VLARRAGAQTAGGSADWGHFGRLEGRVTVLLIVAAGLLLLIGLIAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQRTAKAELVVRARIKSRIGVTRAAPNRPIRTTRSG*
Ga0075428_1010942201	3300006844	Populus Rhizosphere	MLVTSLLRSARVGFGIVLPTLVLALTTHGWAQSPDDSTGGVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRAALLRVKRTATTELAVRARIKSRIGVGTSASDRPVRRARSG*
Ga0075421_1002079226	3300006845	Populus Rhizosphere	QSPDDSTGGVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISNALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRVVLLRVKRTATTELAVRARIKSRIGVGTSASDRPIRRARSD*
Ga0075431_1009899621	3300006847	Populus Rhizosphere	VLPTLVLALTTHGWAQSPDDSTGGVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISNALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRVALLRVKRTATTELAVRARIKSRIGVGTSASDRPIRRARSD*
Ga0075425_1002821122	3300006854	Populus Rhizosphere	VLPTLVLALAGRGWAQAQPDTGRASDATRLEGPVALLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTMGWG*
Ga0075429_1000678122	3300006880	Populus Rhizosphere	MLVTSLLRSARVGFGIVLPTLVLALTTHGWAQSPDDSTGGVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISNALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRAALLRVKRTATTELAVRARIKSRIGVGTSASDRPVRRARSG*
Ga0068865_1017446041	3300006881	Miscanthus Rhizosphere	LLLLIGLIAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQRTAEAELAVRARIKSRIGVTRAAPNRPIRTTRSG*
Ga0075426_107072611	3300006903	Populus Rhizosphere	FGRLDKPVTIMIMLAAGVLLLIGLIAKILDLRLRRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWSGSPVTIRVFGEVPSAELKQAALRRVQRTAKTELAVRARVKSRIGVAPVARGNPSIRTTRSG*
Ga0075426_108252611	3300006903	Populus Rhizosphere	TGRASDATRLEGPVALLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVTRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0075424_1000121738	3300006904	Populus Rhizosphere	MALTLLSVPTQRSWAQANDETTQAADLGRLEWPIAPILIGAIATLLLLALIAKMLDLRLKRDGEVIAVKGVMSDALRGDPELFDLPLTMTVRVPLWRGSPVTIRVYGEVPSSDIRLTALRRVKRAAQRELSVRTRIKSRIGV
Ga0075424_1018536852	3300006904	Populus Rhizosphere	STGWGHFGRLDRPVTILILLAAGLLLFIGVLAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWGGSPVTIRVFGEVPSAELKQAALRRVQRTAKTELTVRARVKSRIGVTPVTRGNPSIRTTRSG*
Ga0075436_1004177001	3300006914	Populus Rhizosphere	GAPAPRRPAARTTRTTVVRLAIVLPTLVLALAGRGWAQAQPDTGRASDATRLEGPVALLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVTRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0075435_1004791161	3300007076	Populus Rhizosphere	LVTSCASHRHASAGGTPVPRRPAVRTTRATVARLVIALPTLVLALAGRGWAQAQPDTGRASDAIRLEEPVALLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVTRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0066709_1018344282	3300009137	Grasslands Soil	VTAQTLADAARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISEALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKQAALRRVKRTATAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0114129_101569275	3300009147	Populus Rhizosphere	MLVTSLLYSARVGFGIVLPTLVLALTTHGWGQSPDDSTGGVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISNALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRAALLRVKRTATTELAVRARIKSRIGVGTSASDRPVRRARSG*
Ga0114129_111213461	3300009147	Populus Rhizosphere	VLPTLVLALAGRGWAQAQPDTGRASDATRLEGPVALLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVTRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0134071_100493574	3300010336	Grasslands Soil	STRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVTAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG*
Ga0126379_112617692	3300010366	Tropical Forest Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIALLAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG*
Ga0126379_121756692	3300010366	Tropical Forest Soil	HFGRLDAPVTVLISLAAGLLLLIAVIAKVLDLRLKRDGEVVAVKGVISDALGGDPELFELPLTTTVRVPLLRGSPVTIKVFGEVPSDEIRQIALDRVKRTAAAELSVRARIKARIGVSTRRSKPPLKTRRSG*
Ga0134122_106501491	3300010400	Terrestrial Soil	LGRLEGRVTILLIVATGLLLLIGLIAKILDLRLKRDGVVDAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQRTAKSELVVRARIKSRIGVTRAAPNRPIRTTRSG*
Ga0137362_100283627	3300012205	Vadose Zone Soil	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTTRWD*
Ga0137376_104188852	3300012208	Vadose Zone Soil	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISEALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKQAALRRVKRTATAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0134061_13296152	3300012399	Grasslands Soil	QTLADAARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISDALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKRAALRCVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG*
Ga0137358_108251991	3300012582	Vadose Zone Soil	AWAQTAGGSSDWGNFGRLEGPVTVLLIVAAGLVLLIGLVAKMLDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQRTAKAELAVRARIKSRIGVTRAVPNRPIRTTRSG*
Ga0137396_100049932	3300012918	Vadose Zone Soil	VLLLILAAGLLLLLGLIGKVLDLRLKRDGEVIAVKGVVSDALGGDPELFELPLTATVRVPLWSGSPVTIRVFGEVPSSELKRAALRRVKRAANAELSVPTRIKSRIGVGSSESTPALRRARSG*
Ga0137394_103120181	3300012922	Vadose Zone Soil	WGNFGRLEGPVTVLLIVAAGLVLLIGLVAKMLDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQRTAKAELAVRARIKSRIGVTRAAPSRPIRTTRSG*
Ga0134089_100524651	3300015358	Grasslands Soil	AQTLADAARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTANAELSVRARIKSRIGVAPRAAARPELRTARSG*
Ga0132258_108849521	3300015371	Arabidopsis Rhizosphere	LAAGLLLLIGVIAKVLDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWSGSPVTIRVFGEVPSAELKQAALRRVQRTAKTELAVRARVKSRIGVTPVARGNPSVRTTRSG*
Ga0132256_1000809851	3300015372	Arabidopsis Rhizosphere	LAAGLLLLIGVIAKVLDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWSGSPVTIRVFGEVPSAELKQAALRRVQRTAKTELAVRARVKSRIGVTPVARGNPSIRTARSG*
Ga0182040_103477532	3300016387	Soil	VTASSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0182037_104714101	3300016404	Soil	TRLEGPVAVVLILAAGLVLLIAILAKIGDLKQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0134112_102473511	3300017656	Grasslands Soil	ALADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG
Ga0187785_104046962	3300017947	Tropical Peatland	ILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0187766_102752192	3300018058	Tropical Peatland	VTPSSTGSWGSFTRLDGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHAAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0066662_108170101	3300018468	Grasslands Soil	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPRASRRLLRTTRWG
Ga0207684_100306892	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPTLVLALAGRGWAQAQPDAGRASDAIRLEEPVALLLIGAVGLLLLLALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIRRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0207684_100816202	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG
Ga0207646_106481511	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	RDKLVTSSASHRHASAGGTPVPRRPAVRTTRATVARLVIAMPTLVLALAGRGWAQAQPDAGRASDAIRLEEPVALLLIGAVGLLLLLALIAKVLELRLKRDGEVIAVKGVISDALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIRRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0207646_106759581	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTTRWG
Ga0209237_11657821	3300026297	Grasslands Soil	LEEPVALLLIGAVGLLLLLALITKVLELRLKRDGEVIAVKGVISDALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0209236_10899181	3300026298	Grasslands Soil	RDKLVTSCASHRHASAGGTPVPRRPAVRTTRATVARLAIAVPTLVLALGGRGWAQAHPDAGRASDAIRLEEPVALLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0209055_100128617	3300026309	Soil	VTAQTLADAARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISEALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKQAALRRVKRTATAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0209686_12281741	3300026315	Soil	RDKLVTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTTRWG
Ga0209802_10126779	3300026328	Soil	TTRATVARLAIAVPTLVLALGWRGWAQAHPDAGRASDAIRLEEPVALLLIGAVGLLLLLALITKVLELRLKRDGEVIAVKGVISDALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0209803_11596441	3300026332	Soil	LAIAVPTLVLALGGRGWAQAHPDAGRASDAIRLEEPVALLLIGAVGLLLLLALITKVLELRLKRDGEVIAVKGVISDALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0209158_10727812	3300026333	Soil	AVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTTRWG
Ga0209377_10723671	3300026334	Soil	AGRASDAIRLEEPVALLLIGAVGLLLLLALITKVLELRLKRDGEVIAVKGVISDALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0209057_10191355	3300026342	Soil	VTAQTLADVARAAGSTRLEASVTLLLIGTVGLLLLLAVIAKVLDLRLKRDGEVIAVKGVISEALGGDPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKQAALRRVKRTATAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0209160_11816082	3300026532	Soil	RHASAGGTPVPRRPAVRTTRATVARLAIAVPTLVLALGGRGWAQAHPDAGRASDAIRLEEPVALLLIGAVGLLLLLALITKVLELRLKRDGEVIAVKGVISDALGADPELFGLPLTATVRVPLWRGAPVTIRVFGEVPSREIKRAALRRVKRAANAELSVRARIKSRIGVAPSASSRLLRITRWG
Ga0209811_100045778	3300027821	Surface Soil	AWAQTAGGSSDWGHFGRLEGPVTILLIVAAGLLLLIGVIAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQHTAKAELAVRARIKSRIGVTRAAPNRPIRTTRSG
Ga0209382_108824562	3300027909	Populus Rhizosphere	TQGWGQSPDDSTGGVEPGRLDGSVALLLILAVGLLLVIALIAKVLELRLKRDGEVIAVKGVISNALGGDPELFGLPLTAKVRVPLWRGSPVTIRVFGEVPSSELKRVVLLRVKRTATTELAVRARIKSRIGVGTSASDRPIRRARSD
Ga0137415_1000782912	3300028536	Vadose Zone Soil	VTSWLRSDSTQLEGPVLLLILAAGLLLLLGLIGKVLDLRLKRDGEVIAVKGVVSDALGGDPELFGLPLTATVRVPLWSGAPVTIRVFGEVPSSELKRAALRRVKRAANAELSVPTRIKSRIGVGSSESTPALRRARSG
Ga0306917_106957902	3300031719	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLKQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0307469_101067092	3300031720	Hardwood Forest Soil	VTAQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRSLLRTMRWG
Ga0318493_101737351	3300031723	Soil	RTVTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPGRPIRTTRSG
Ga0318501_102376672	3300031736	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPGRPIRTTRSG
Ga0318494_102029672	3300031751	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0318546_101132462	3300031771	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0318547_109776771	3300031781	Soil	VTPSSTGSWGSFSRLEGSVAVVLILAAGLVLLIALVAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0318576_106104451	3300031796	Soil	TGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0318523_101370902	3300031798	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIALVAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0318512_102800352	3300031846	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVIADALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0318544_103498261	3300031880	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIR
Ga0318536_104632001	3300031893	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSAELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPGRPIRTTRSG
Ga0306921_102915021	3300031912	Soil	TGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPSRPIRTTRSG
Ga0310913_106296561	3300031945	Soil	GPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPGRPIRTTRSG
Ga0318563_105262441	3300032009	Soil	VTPSSTGSWGSFTRLEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVT
Ga0318518_106339741	3300032090	Soil	LEGPVAVVLILAAGLVLLIAILAKIVDLRQKRDGEVIAVKGVISDALGGDPELFDLPLTATVRVPLWSGSPVTIRVFGDVPSTELKQAALRRVQHTAKSELAVRARVKSRIGVTPARPGRPIRTTRSG
Ga0307470_103947131	3300032174	Hardwood Forest Soil	NGRHGPPDRSASAAGPLLLIGLIAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQHTAKAELAVRARIKSRIGVTRAAPNRPIRTTRSG
Ga0307471_1027409792	3300032180	Hardwood Forest Soil	DKLVTPQTLADAARAAGSTRLEASVTLLLIGAVGLLLLLALIAKVLDLRLKRDGEVIAVKGVISDALGGDPELLGLPLTATVRVPLWRGSPVTIRVFGEVPSKELKRVALLRVKRTAKAELSVRARIKSRIGVAPSASRRLLRTTRWG
Ga0307472_1013636821	3300032205	Hardwood Forest Soil	AWAQTAGGSSDWGHFGRLEAPVTILLIVAAGLLLLIGVIAKILDLRLKRDGEVVAVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTIRVFGEVPSGELKQAALRRVQHTAKAELAVRARIKSRIGVTRAAPNRPIRTTRSG
Ga0335085_102741691	3300032770	Soil	AAGLLLLIGVIAKVLDLRLKRDGEVIAVKGVISDALGGDPELFELPLTATVRVPLWSGSPVTIRVFGEVPSAELKQAALRRVQRTAKTELAVRARVKSRIGVTPVARGNPSIRTTRSG
Ga0326726_100998291	3300033433	Peat Soil	MAAGLLLLIGLIAKILDLRLKRDGEVVVVKGVISDALGGDPELFELPLTATVRVPLWRGSPVTVRVFGEVPSGELKQAALRRVQRTAKTELAVRTRIKSRIGVARVAENRPIRTTRSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099249

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences