Metagenome Family F099100

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099100
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	65 residues
Representative Sequence	MSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPSGELLWTTETMTGPDLANIVDD
Number of Associated Samples	81
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.59 %
% of genes near scaffold ends (potentially truncated)	98.06 %
% of genes from short scaffolds (< 2000 bps)	82.52 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.058 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.427 % of family members)
Environment Ontology (ENVO)	Unclassified (58.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.427 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.56% β-sheet: 11.11% Coil/Unstructured: 73.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF01551	Peptidase_M23	85.44
PF07479	NAD_Gly3P_dh_C	3.88
PF00581	Rhodanese	2.91
PF01210	NAD_Gly3P_dh_N	1.94
PF00462	Glutaredoxin	1.94
PF00069	Pkinase	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.88
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	98.06 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	86.41 %
Unclassified	root	N/A	1.94 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	73.79 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.94 %
Unclassified	root	N/A	1.94 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.97 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	73.79 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.94 %
Unclassified	root	N/A	1.94 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.97 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	73.79 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.94 %
Unclassified	root	N/A	1.94 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.97 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	73.79 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.94 %
Unclassified	root	N/A	1.94 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10074918	All Organisms → cellular organisms → Bacteria → Proteobacteria	1569	Open in IMG/M
3300005175\|Ga0066673_10622460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	626	Open in IMG/M
3300005364\|Ga0070673_102086125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	538	Open in IMG/M
3300005444\|Ga0070694_101095785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	664	Open in IMG/M
3300005542\|Ga0070732_10239438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1086	Open in IMG/M
3300005944\|Ga0066788_10067893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	856	Open in IMG/M
3300006028\|Ga0070717_10950135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	783	Open in IMG/M
3300006755\|Ga0079222_10217307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1167	Open in IMG/M
3300010048\|Ga0126373_12700576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	554	Open in IMG/M
3300010376\|Ga0126381_100438915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1828	Open in IMG/M
3300010376\|Ga0126381_100918753	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300010376\|Ga0126381_105120853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	502	Open in IMG/M
3300010397\|Ga0134124_11635366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	675	Open in IMG/M
3300010401\|Ga0134121_10046027	Not Available	3570	Open in IMG/M
3300012189\|Ga0137388_10757054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	901	Open in IMG/M
3300016294\|Ga0182041_10125463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1936	Open in IMG/M
3300016294\|Ga0182041_10356791	All Organisms → cellular organisms → Bacteria → Proteobacteria	1231	Open in IMG/M
3300016341\|Ga0182035_11255735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	662	Open in IMG/M
3300016357\|Ga0182032_11906991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	520	Open in IMG/M
3300016404\|Ga0182037_10275010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1343	Open in IMG/M
3300017947\|Ga0187785_10583403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	571	Open in IMG/M
3300017994\|Ga0187822_10244491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	614	Open in IMG/M
3300018060\|Ga0187765_10873731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	606	Open in IMG/M
3300018086\|Ga0187769_11153275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	586	Open in IMG/M
3300018090\|Ga0187770_11775016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	505	Open in IMG/M
3300018433\|Ga0066667_10018602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	3623	Open in IMG/M
3300020004\|Ga0193755_1236444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	500	Open in IMG/M
3300020581\|Ga0210399_10257683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1455	Open in IMG/M
3300021432\|Ga0210384_10071189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3131	Open in IMG/M
3300021478\|Ga0210402_11907050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	520	Open in IMG/M
3300021479\|Ga0210410_11331754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	611	Open in IMG/M
3300021560\|Ga0126371_10996992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	979	Open in IMG/M
3300021560\|Ga0126371_11839282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	726	Open in IMG/M
3300024186\|Ga0247688_1038158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	750	Open in IMG/M
3300025906\|Ga0207699_10013413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4194	Open in IMG/M
3300025906\|Ga0207699_11111890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	585	Open in IMG/M
3300025915\|Ga0207693_10125722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2015	Open in IMG/M
3300025928\|Ga0207700_10204498	All Organisms → cellular organisms → Bacteria → Proteobacteria	1666	Open in IMG/M
3300025949\|Ga0207667_12181692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300027383\|Ga0209213_1084962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	589	Open in IMG/M
3300027663\|Ga0208990_1033592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1617	Open in IMG/M
3300027853\|Ga0209274_10597624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	571	Open in IMG/M
3300027879\|Ga0209169_10680694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	534	Open in IMG/M
3300030053\|Ga0302177_10614731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	554	Open in IMG/M
3300031544\|Ga0318534_10722027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	562	Open in IMG/M
3300031546\|Ga0318538_10274984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	906	Open in IMG/M
3300031549\|Ga0318571_10305797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300031561\|Ga0318528_10271844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	909	Open in IMG/M
3300031640\|Ga0318555_10291647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	882	Open in IMG/M
3300031682\|Ga0318560_10268716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	917	Open in IMG/M
3300031713\|Ga0318496_10001566	All Organisms → cellular organisms → Bacteria → Proteobacteria	9217	Open in IMG/M
3300031719\|Ga0306917_10019736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4132	Open in IMG/M
3300031719\|Ga0306917_10732174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	776	Open in IMG/M
3300031719\|Ga0306917_11265861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	571	Open in IMG/M
3300031736\|Ga0318501_10498889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	664	Open in IMG/M
3300031751\|Ga0318494_10382944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	815	Open in IMG/M
3300031753\|Ga0307477_10615348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	731	Open in IMG/M
3300031764\|Ga0318535_10011710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3151	Open in IMG/M
3300031764\|Ga0318535_10440407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	580	Open in IMG/M
3300031765\|Ga0318554_10086497	All Organisms → cellular organisms → Bacteria → Proteobacteria	1753	Open in IMG/M
3300031770\|Ga0318521_10041553	All Organisms → cellular organisms → Bacteria → Proteobacteria	2327	Open in IMG/M
3300031770\|Ga0318521_10805280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	573	Open in IMG/M
3300031771\|Ga0318546_10436366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	916	Open in IMG/M
3300031777\|Ga0318543_10224725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	835	Open in IMG/M
3300031777\|Ga0318543_10234515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	817	Open in IMG/M
3300031777\|Ga0318543_10353805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	658	Open in IMG/M
3300031778\|Ga0318498_10008036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	4142	Open in IMG/M
3300031778\|Ga0318498_10171931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	985	Open in IMG/M
3300031779\|Ga0318566_10178049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1055	Open in IMG/M
3300031781\|Ga0318547_10012944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3901	Open in IMG/M
3300031782\|Ga0318552_10372901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	727	Open in IMG/M
3300031796\|Ga0318576_10473020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	592	Open in IMG/M
3300031819\|Ga0318568_10014850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4110	Open in IMG/M
3300031819\|Ga0318568_10230600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1145	Open in IMG/M
3300031819\|Ga0318568_10249621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1099	Open in IMG/M
3300031819\|Ga0318568_10685578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	637	Open in IMG/M
3300031821\|Ga0318567_10526532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	671	Open in IMG/M
3300031823\|Ga0307478_10079939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2494	Open in IMG/M
3300031823\|Ga0307478_10483076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1032	Open in IMG/M
3300031833\|Ga0310917_10703409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	684	Open in IMG/M
3300031835\|Ga0318517_10356798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	660	Open in IMG/M
3300031835\|Ga0318517_10364041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	653	Open in IMG/M
3300031859\|Ga0318527_10301186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	682	Open in IMG/M
3300031860\|Ga0318495_10255478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	784	Open in IMG/M
3300031860\|Ga0318495_10414246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	593	Open in IMG/M
3300031893\|Ga0318536_10019202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	3076	Open in IMG/M
3300031893\|Ga0318536_10349690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	748	Open in IMG/M
3300031894\|Ga0318522_10326694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	581	Open in IMG/M
3300031941\|Ga0310912_10728258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	768	Open in IMG/M
3300031954\|Ga0306926_10217234	All Organisms → cellular organisms → Bacteria → Proteobacteria	2372	Open in IMG/M
3300032001\|Ga0306922_11036379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	844	Open in IMG/M
3300032010\|Ga0318569_10522986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300032035\|Ga0310911_10521688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	689	Open in IMG/M
3300032039\|Ga0318559_10299573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	746	Open in IMG/M
3300032039\|Ga0318559_10333907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	705	Open in IMG/M
3300032041\|Ga0318549_10372976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	643	Open in IMG/M
3300032052\|Ga0318506_10261012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	767	Open in IMG/M
3300032052\|Ga0318506_10435563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	581	Open in IMG/M
3300032052\|Ga0318506_10506777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	535	Open in IMG/M
3300032090\|Ga0318518_10029006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2515	Open in IMG/M
3300032261\|Ga0306920_100828564	All Organisms → cellular organisms → Bacteria → Proteobacteria	1356	Open in IMG/M
3300033158\|Ga0335077_10067533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4281	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.06%
Host-Associated	Host-Associated	1.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.09%
Plants	Host-Associated → Plants	1.94%
Aquatic	Environmental → Aquatic	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.12%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Peat	Environmental → Terrestrial → Peat	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.64%
Loam	Environmental → Terrestrial → Soil → Loam	11.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.85%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.97%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.97%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_100749182	3300004633	Tropical Forest Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTTCVAMFGPAAELIWTTDAMTGPD
Ga0066673_106224602	3300005175	Soil	MNSLLDSEHIPGRPGARFEPYVRLVHCLVPRTMYVAMFGPAGDLMWSTEPVSGPDLMNVVDDALLSARSNPDSPGQVRLLPGNLP
Ga0070673_1020861252	3300005364	Switchgrass Rhizosphere	MNQPSPSEYVPGQPGSRFEPYVRLVRSLLPRTSCIAMFGASGELIWSTDTMTGPDLMNIVDDALLSAGAN
Ga0070694_1010957851	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKPSPDSEYVPGQPGARFDPYVRLLRALLPRTSCIAMFGAAGELMWSTDTMTGPDLINIVDDALLSVSSNP
Ga0070732_102394382	3300005542	Surface Soil	MSPPPESIHAPGQPGVRFEPYVRLLRSLLPRTSSVALFATSGELQWSTETMTGPDVMNIV
Ga0066788_100678931	3300005944	Soil	MNQAATGDYVPGQPGNRFDPYVRLMRSLLPRTSCIAMFGPSGELMWSTDTMTGPDLMNIIDDALLGAG
Ga0070717_109501352	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNQPSPSEYVPGQPGSRFEPYVRLVRSLLPRTSCIAMFGASGELIWSTDTMTGPDLMNIVDDALL
Ga0079222_102173072	3300006755	Agricultural Soil	MSPTPESESVAGQPGLRFEPYVRLLRSLLPRASCVAMFGPAGELMWSTDTM
Ga0126373_127005762	3300010048	Tropical Forest Soil	MVFTAMSALPLNDYVPGHPGDRFDPYVRLIRSLLPRTSCVAMFGGSGELLWTTDAMAG
Ga0126381_1004389151	3300010376	Tropical Forest Soil	LRNDRNDRKGEGVGAMNPLTDRDYVPGQPGARFDPYVRLVRSLLPRASCVALFGPAGELWWSTETMTGPDLINIVDDGL
Ga0126381_1009187531	3300010376	Tropical Forest Soil	MVFAAMDAHPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTEPDLLNVVDDALL
Ga0126381_1051208532	3300010376	Tropical Forest Soil	MNPLTERDYVPGQPGARFDPFVRLVRSLLPRTCSVALFGPAGELWWSTETVMGPDLVN
Ga0134124_116353661	3300010397	Terrestrial Soil	MNQPSPSEYVPGQPGSRFEPYVRLVRSLLPRTSCIAMFGASGELIWSTDTMTGPDLMNIVDDALLSAGANPGSPGQLRLL
Ga0134121_100460271	3300010401	Terrestrial Soil	MKPSPDSEYVPGQPGARFDPYVRLLRSLLPRTSCIAMFGAAGELMWSTDTMTGPDLINIVDDA
Ga0137388_107570542	3300012189	Vadose Zone Soil	MSSLLQSDHVPGRPGPRFEPYVRLVRFLLPRTSCVAMFGPAGELVWSTDTISGPDLMNIIDDALLSARSNPDS
Ga0182041_101254631	3300016294	Soil	MVFAAMDALPFTDYVPGEPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVD
Ga0182041_103567912	3300016294	Soil	VFAAMSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPSGELLWTTETMT
Ga0182035_112557351	3300016341	Soil	MVSTPMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWSTDATTGPDLMNAVDDALL
Ga0182032_119069911	3300016357	Soil	MSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTEAVAGPDLINIVDDALLSTR
Ga0182037_102750102	3300016404	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPAAELIWTTDAMTGPDLMNLVDDAVL
Ga0187785_105834031	3300017947	Tropical Peatland	MNQPQTSDFVPGQPGTRFEPYVRLVRSLLPRTTSISMFGPGGELVWSTDPMTGPD
Ga0187822_102444912	3300017994	Freshwater Sediment	VRWQLTDIGAAGVFPTMSPLPDKDFVPGQPGERFEPYVRLVRSLLPRTTCIAMFGPAGELLWSTETMTGPDLINI
Ga0187765_108737312	3300018060	Tropical Peatland	MVFTPMSALPVSDYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPSGELIWTTETMTGPDLINMVDDALLATRANPE
Ga0187769_111532751	3300018086	Tropical Peatland	MSPPPDTTHAPGQPGVRFDPYVRLVRSLLPRTSSIAMFGTGGEFLWSSDTMTGPDLMNTVEDALL
Ga0187770_117750161	3300018090	Tropical Peatland	VPGQPGVRFEPYVRLVRALLPRTSCVAMFGPGGDLMWSTDTMTGPDLMNLVEDALAAARASPDSAGQLRLL
Ga0066667_100186026	3300018433	Grasslands Soil	MSSLLDIEHIPGRPGGRFEPYVRLVHCLVPRTMYVAMFGPAGDLMWSTEPVSGPDLMNVVDDALLSARSNPDSPGQVRLLPGNLP
Ga0193755_12364442	3300020004	Soil	MSSSPHSEHVPGRPGPRFEPYVRLVRCLLPRASCVAMFAPAGDLVWSTETVGPDLSNVMDDALMSTRSNPDSPGQVRVLPGNMPV
Ga0210399_102576832	3300020581	Soil	MTETAHSEHLPGRPGERFEPHVRLVRCLLPRTSCVAMFGPAGELLWSTDTTTGPDLMNIV
Ga0210384_100711891	3300021432	Soil	MSEPSSTEYVPGQPGNRFDPYVRLVRSLLPRTTCVAMFGASGELMWSTDTMTGPDLMN
Ga0210402_119070501	3300021478	Soil	MSEPSSTEYVPGQPGNRFDPYVRLVRSLLPRTTCVAMFGASGELMWSTDTMTGPDLM
Ga0210410_113317541	3300021479	Soil	MNQPSQSEYVPGQPGVRFDPFVRLVRSLLPRTSCIALFGPSGELMWSTDTVIGPDLTNIVDDALL
Ga0126371_109969921	3300021560	Tropical Forest Soil	MVFTAMSALPLSDYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGE
Ga0126371_118392821	3300021560	Tropical Forest Soil	MSEPSPAEYVPGQPGTRFDPYVRLVRSLLPRTSSIAMFGPSGELMWSTDTMTGPDLMNIVDDALLSAAANPG
Ga0247688_10381582	3300024186	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPAAELIWTTDAMTGPDLINLVDDAVLSTRADPES
Ga0207699_100134131	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MVFTPMSALPVSDYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPSGELIWTTETMTGPDLINMVDDALLATRA
Ga0207699_111118902	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNPSSDSEYVPGQPGTRFEPYVRLLRSLLPRTSCIAMFGPAAELLWSTDTMTGPDLINIVDDALL
Ga0207693_101257221	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPSSTEYVPGQPGTRFDPYVRLVRSLLPRTTCVAMFGASGELMWSTDTMTGPDLMNIVDDALL
Ga0207700_102044981	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPAAALIW
Ga0207667_121816921	3300025949	Corn Rhizosphere	MNQPSPSEYVPGQPGSRFEPYVRLVRSLLPRSSCIAMFGASGELIWSTDTMTGPDLMNI
Ga0209213_10849622	3300027383	Forest Soil	MSSSPPSEHVPGRPGPRFEPYVRLVRGLLPRTSCIAMFGPAGDVVWSTESMTGPDLVNIIDDVLLSARSNPDSAGQVRLLPGNLPVYLCSLRDDT
Ga0208990_10335922	3300027663	Forest Soil	MSSSPQSDHVPGRPGPRFEPYVRLVRCLLPRASCVAMFAPAGDVVWSTETVGPDLANVMDDALMSTRSNPDSPGQVRVLPG
Ga0209274_105976241	3300027853	Soil	MSALPDGEYVPGQPGNRFDPYVRLIRSLLPRTSCVAMFGPGGDLLWSTDTMTGPDLMNIVDD
Ga0209169_106806942	3300027879	Soil	MSAPADSEYVSGQPGARFEPYVRLVRALMPRASCVSMFGPTGDLRWSTDDMTGPDLMNIVDDALLSARNNPDSAG
Ga0302177_106147311	3300030053	Palsa	MNQPAPTEYVPGQPGSRFDPYVRLVRSLLPRTTCIAMFGASGELLWSTDTMTGP
Ga0318534_107220271	3300031544	Soil	MVFTAMSALPFSEYVPGQPGERFDPYVRLVRSLLPRTACVAMFGPAGELLWTTDTVPGPDLAN
Ga0318541_101616992	3300031545	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPA
Ga0318538_102749842	3300031546	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYIRLVRSLLPRTSCIAMFGPAGELLWTTEAVAGPDLVNIVDDALLSSR
Ga0318571_103057971	3300031549	Soil	MVSTPMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWSTDATTGPDLMNVVDDALLSTR
Ga0318528_102718441	3300031561	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPAAELIWTTDAMTGPDLMN
Ga0318555_102916472	3300031640	Soil	MVFAAMDALPFTDYVPGEPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVDDA
Ga0318560_102687162	3300031682	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVDDALLSTRANPD
Ga0318496_100015661	3300031713	Soil	MVFAAMDALPFTDYVPGEPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLL
Ga0306917_100197367	3300031719	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYIRLVRSLLPRTSCIAMFGPAGELLWTTEAVAGPDLVN
Ga0306917_107321742	3300031719	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPS
Ga0306917_112658612	3300031719	Soil	MVFTAMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTDATTGPDVMNVVDDALLS
Ga0318501_104988892	3300031736	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVHLIRSLLPRTSCVALFGPAAELIWTTDAM
Ga0318494_103829441	3300031751	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVDDALL
Ga0307477_106153482	3300031753	Hardwood Forest Soil	MSSTGNSEHVPGRPGARFEPYVRLVHCLLPRTTYIAMYGPAGDLMWSTEPVAGPDLMNVVDDTLLSARSNPDSPGQVRLLAGNLP
Ga0318535_100117101	3300031764	Soil	MSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPSGELLWTTETMT
Ga0318535_104404072	3300031764	Soil	MVFAAMDALPFTDYVPGEPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVDDALLSTRANP
Ga0318554_100864973	3300031765	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYVRLVRSLLPRTSCIAMFGPAGELLWTTETVAG
Ga0318521_100415531	3300031770	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVDD
Ga0318521_108052801	3300031770	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTET
Ga0318546_104363662	3300031771	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTG
Ga0318543_102247252	3300031777	Soil	MVFAAMDALPFTDYVPGEPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVDDALL
Ga0318543_102345152	3300031777	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTE
Ga0318543_103538052	3300031777	Soil	MSALPFSDYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTEAVAGPDLINIVDDALLSTRANPESAGQV
Ga0318498_100080367	3300031778	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPAAELIWTTD
Ga0318498_101719312	3300031778	Soil	MVFTAMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTDATTGPDVMNVVDDALLSTRA
Ga0318566_101780492	3300031779	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYVRLVRSLLPRTSCIAMFGPAGELLWTTEAVAGPD
Ga0318547_100129446	3300031781	Soil	MSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPSGELLWTTETMTGPDLANIVDDALLSTRANPD
Ga0318552_103729012	3300031782	Soil	MVFSAMSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPAGELLWSTEATTGPDLTNIVDDALLSTRANPD
Ga0318576_104730201	3300031796	Soil	MSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTEAVAGPDLINIV
Ga0318568_100148507	3300031819	Soil	MSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPSGELLWTTETMTGPDLANIVDD
Ga0318568_102306002	3300031819	Soil	MVFTAMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTDATTGPN
Ga0318568_102496212	3300031819	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVDDALLSTRA
Ga0318568_106855782	3300031819	Soil	MVFTAMSALPFSEYVPGQPGERFDPYVRLVRSLLPRTACVAMFGPAGELLW
Ga0318567_105265322	3300031821	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLN
Ga0307478_100799391	3300031823	Hardwood Forest Soil	MNQPSQSEYVPGQPGVRFDPFVRLVRSLLPRTSCIALFGPSGELMWSTDTVIGPDLTNIVDDAL
Ga0307478_104830761	3300031823	Hardwood Forest Soil	MVFTAMSALPLSDYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGAAGELLWTTDAMTGPDLM
Ga0310917_107034091	3300031833	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPAAELIWTTDAMTGPDLMNLVDDAV
Ga0318517_103567981	3300031835	Soil	MVFAAMDALPFTDYVPGEPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNV
Ga0318517_103640412	3300031835	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLL
Ga0318527_103011862	3300031859	Soil	MVFTAMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTDATTGPDVMNVIDDALLST
Ga0318495_102554782	3300031860	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGP
Ga0318495_104142461	3300031860	Soil	MVFAAMSALASSDYVPGQPGDRFDPYVRLIRSLLPRISCVAMFGASGELLWTTDAMTGPD
Ga0318536_100192026	3300031893	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPAAELIWTTDAMTGPDLMNL
Ga0318536_103496901	3300031893	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWST
Ga0318522_103266942	3300031894	Soil	MSALPFSDYVPGQPGERFDPYVRLIRSLLPRTSCVAMFGPAGELLWTT
Ga0310912_107282582	3300031941	Soil	MVFTAMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAG
Ga0306926_102172341	3300031954	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYVRLVRSLLPRTSCIAMFGPAGELLWTTE
Ga0306922_110363792	3300032001	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYVRLVRSLLPRTSCIAMFGPAGELLWTTETVAGP
Ga0318569_105229862	3300032010	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYVRLVRSLLPRTSCIAMFGPAGELLWTTEAVAGPDLANIVDDAL
Ga0310911_105216882	3300032035	Soil	MVPTPMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWSTDATTGPDLMNAVDDALLST
Ga0318559_102995732	3300032039	Soil	MVVAAMDALPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTETMTGPDLLNVVDDALLSTRANP
Ga0318559_103339072	3300032039	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYVRLVRSLLPRTSCIAMFGPAGELLWTTETVAGPD
Ga0318549_103729761	3300032041	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYVRLVRSLLPRTSCIAMFGPAGELLWTTEAVAGPDLANVVDDALLSSRAN
Ga0318506_102610122	3300032052	Soil	MVFAAMDALPFTDYVPGEPGDRFDPYVRLIRSLLPRTSCVAMFGPSGALMWSTE
Ga0318506_104355631	3300032052	Soil	MVFTAMSALPVSDYVPGQPGDRFDPYIRLVRSLLPRTSCIAMFGPAGELLWTTEAVAGPDLVNIVDDALLSSRAN
Ga0318506_105067771	3300032052	Soil	MVFTAMSALPFSEYVPGQPGDRFDPYVRLIRSLLPRTSCVAMFGPAGELLWTTDATTGPD
Ga0318518_100290065	3300032090	Soil	MVFAAMSALPVTDYVPGQPGDRFDPYVRLIRSLLPRTSCVALFGPAAELIWTTDAMTGPDLMNLVDDAVLS
Ga0306920_1008285641	3300032261	Soil	MVVAAMDSLPFTDYVPGKPGDRFDPYVRLIRSLLPRTSCVAMFGPSGAL
Ga0335077_100675331	3300033158	Soil	MSVPAESEYVPGQPGGRFDPYVRLIRSLLPRTACISMFGPSGDLMWSTDPMTGPDLMNIVDDALLSARANPES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F099100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences