NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F099025

Metagenome / Metatranscriptome Family F099025

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F099025
Family Type Metagenome / Metatranscriptome
Number of Sequences 103
Average Sequence Length 76 residues
Representative Sequence LTLSRRLLEQGVRHLQLSWHSPSLKPGLSPFAATAADVARLYAAVEAYLEGLSRITPLTFATVSEAAAVLG
Number of Associated Samples 86
Number of Associated Scaffolds 103

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.04 %
% of genes near scaffold ends (potentially truncated) 88.35 %
% of genes from short scaffolds (< 2000 bps) 84.47 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.146 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(31.068 % of family members)
Environment Ontology (ENVO) Unclassified
(42.718 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.544 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 35.35%    β-sheet: 0.00%    Coil/Unstructured: 64.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 103 Family Scaffolds
PF01943Polysacc_synt 26.21
PF14667Polysacc_synt_C 17.48
PF13440Polysacc_synt_3 2.91
PF01554MatE 1.94
PF00550PP-binding 0.97
PF00535Glycos_transf_2 0.97
PF02954HTH_8 0.97
PF13632Glyco_trans_2_3 0.97


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.15 %
UnclassifiedrootN/A4.85 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10076521All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300002558|JGI25385J37094_10118498All Organisms → cellular organisms → Bacteria → Proteobacteria758Open in IMG/M
3300002560|JGI25383J37093_10025932All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_81967Open in IMG/M
3300002561|JGI25384J37096_10199615All Organisms → cellular organisms → Bacteria → Proteobacteria589Open in IMG/M
3300002907|JGI25613J43889_10148167All Organisms → cellular organisms → Bacteria → Proteobacteria607Open in IMG/M
3300002908|JGI25382J43887_10451976All Organisms → cellular organisms → Bacteria → Proteobacteria544Open in IMG/M
3300002912|JGI25386J43895_10168424All Organisms → cellular organisms → Bacteria → Proteobacteria549Open in IMG/M
3300002917|JGI25616J43925_10330251All Organisms → cellular organisms → Bacteria → Proteobacteria566Open in IMG/M
3300004157|Ga0062590_100322264All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300005180|Ga0066685_10091464All Organisms → cellular organisms → Bacteria2021Open in IMG/M
3300005186|Ga0066676_10291399All Organisms → cellular organisms → Bacteria → Proteobacteria1077Open in IMG/M
3300005294|Ga0065705_11128074All Organisms → cellular organisms → Bacteria → Proteobacteria516Open in IMG/M
3300005441|Ga0070700_100303373All Organisms → cellular organisms → Bacteria → Proteobacteria1166Open in IMG/M
3300005447|Ga0066689_10393565All Organisms → cellular organisms → Bacteria → Proteobacteria866Open in IMG/M
3300005451|Ga0066681_10446573All Organisms → cellular organisms → Bacteria → Proteobacteria794Open in IMG/M
3300005451|Ga0066681_10684134All Organisms → cellular organisms → Bacteria → Proteobacteria626Open in IMG/M
3300005467|Ga0070706_100233744All Organisms → cellular organisms → Bacteria1716Open in IMG/M
3300005468|Ga0070707_100838378All Organisms → cellular organisms → Bacteria → Proteobacteria883Open in IMG/M
3300005518|Ga0070699_101754208All Organisms → cellular organisms → Bacteria → Proteobacteria568Open in IMG/M
3300005557|Ga0066704_10485210All Organisms → cellular organisms → Bacteria → Proteobacteria815Open in IMG/M
3300005558|Ga0066698_10016817All Organisms → cellular organisms → Bacteria4186Open in IMG/M
3300005558|Ga0066698_10027069All Organisms → cellular organisms → Bacteria3435Open in IMG/M
3300005598|Ga0066706_11248062All Organisms → cellular organisms → Bacteria → Proteobacteria563Open in IMG/M
3300006796|Ga0066665_10000239All Organisms → cellular organisms → Bacteria19835Open in IMG/M
3300006804|Ga0079221_10156114All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300006854|Ga0075425_101163251All Organisms → cellular organisms → Bacteria → Proteobacteria877Open in IMG/M
3300006854|Ga0075425_101531992All Organisms → cellular organisms → Bacteria → Proteobacteria752Open in IMG/M
3300006871|Ga0075434_102358381All Organisms → cellular organisms → Bacteria → Proteobacteria534Open in IMG/M
3300006876|Ga0079217_10786354All Organisms → cellular organisms → Bacteria → Proteobacteria658Open in IMG/M
3300006903|Ga0075426_10820292All Organisms → cellular organisms → Bacteria → Proteobacteria700Open in IMG/M
3300006914|Ga0075436_100434357All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300009012|Ga0066710_100086526All Organisms → cellular organisms → Bacteria4119Open in IMG/M
3300009012|Ga0066710_104110001All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium544Open in IMG/M
3300009088|Ga0099830_10282553All Organisms → cellular organisms → Bacteria1321Open in IMG/M
3300009137|Ga0066709_103317851All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300009147|Ga0114129_10371131All Organisms → cellular organisms → Bacteria1891Open in IMG/M
3300009162|Ga0075423_10325627All Organisms → cellular organisms → Bacteria1611Open in IMG/M
3300010126|Ga0127482_1122871All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300010304|Ga0134088_10295387All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium782Open in IMG/M
3300010329|Ga0134111_10132912All Organisms → cellular organisms → Bacteria975Open in IMG/M
3300010329|Ga0134111_10372219All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium607Open in IMG/M
3300010401|Ga0134121_10111363All Organisms → cellular organisms → Bacteria2304Open in IMG/M
3300012201|Ga0137365_10657473All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium767Open in IMG/M
3300012202|Ga0137363_10755064All Organisms → cellular organisms → Bacteria → Proteobacteria824Open in IMG/M
3300012203|Ga0137399_11061251All Organisms → cellular organisms → Bacteria → Proteobacteria682Open in IMG/M
3300012204|Ga0137374_10168547All Organisms → cellular organisms → Bacteria1930Open in IMG/M
3300012206|Ga0137380_10025206All Organisms → cellular organisms → Bacteria → Proteobacteria5479Open in IMG/M
3300012206|Ga0137380_10357864All Organisms → cellular organisms → Bacteria1301Open in IMG/M
3300012206|Ga0137380_10426362All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1175Open in IMG/M
3300012207|Ga0137381_11709584All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300012208|Ga0137376_10898318All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium761Open in IMG/M
3300012208|Ga0137376_11629377All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium536Open in IMG/M
3300012209|Ga0137379_10203722All Organisms → cellular organisms → Bacteria1892Open in IMG/M
3300012211|Ga0137377_10029307All Organisms → cellular organisms → Bacteria4971Open in IMG/M
3300012351|Ga0137386_10286063All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1186Open in IMG/M
3300012354|Ga0137366_10191119All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1532Open in IMG/M
3300012357|Ga0137384_11591239All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300012359|Ga0137385_11113410All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium650Open in IMG/M
3300012359|Ga0137385_11179643All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium627Open in IMG/M
3300012373|Ga0134042_1019668All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300012380|Ga0134047_1193946All Organisms → cellular organisms → Bacteria → Proteobacteria513Open in IMG/M
3300012392|Ga0134043_1295461All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium586Open in IMG/M
3300012403|Ga0134049_1216464All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300012532|Ga0137373_10278783All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1338Open in IMG/M
3300012683|Ga0137398_10648629All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium732Open in IMG/M
3300012683|Ga0137398_10916936All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300012922|Ga0137394_10451042All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1095Open in IMG/M
3300012927|Ga0137416_10146672All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1842Open in IMG/M
3300012930|Ga0137407_11900021All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300015245|Ga0137409_11611659All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300015358|Ga0134089_10070764All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1302Open in IMG/M
3300015374|Ga0132255_102058129All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300018054|Ga0184621_10056780All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1320Open in IMG/M
3300018071|Ga0184618_10158647All Organisms → cellular organisms → Bacteria → Proteobacteria928Open in IMG/M
3300018076|Ga0184609_10099949All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1303Open in IMG/M
3300018076|Ga0184609_10455700All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium587Open in IMG/M
3300018431|Ga0066655_10025068All Organisms → cellular organisms → Bacteria → Proteobacteria2835Open in IMG/M
3300018433|Ga0066667_10011745All Organisms → cellular organisms → Bacteria → Proteobacteria4259Open in IMG/M
3300021344|Ga0193719_10003782All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria6137Open in IMG/M
3300025910|Ga0207684_11116543All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300025922|Ga0207646_10731171All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300026285|Ga0209438_1204395All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium528Open in IMG/M
3300026298|Ga0209236_1215413All Organisms → cellular organisms → Bacteria → Proteobacteria684Open in IMG/M
3300026307|Ga0209469_1112778All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium708Open in IMG/M
3300026310|Ga0209239_1127007All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300026323|Ga0209472_1278975All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium533Open in IMG/M
3300026327|Ga0209266_1063777All Organisms → cellular organisms → Bacteria → Proteobacteria1746Open in IMG/M
3300026327|Ga0209266_1116561All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300026328|Ga0209802_1290193All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300026334|Ga0209377_1131835All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300026530|Ga0209807_1085209All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300026536|Ga0209058_1067751All Organisms → cellular organisms → Bacteria → Proteobacteria1930Open in IMG/M
3300027882|Ga0209590_10982194All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium528Open in IMG/M
3300028536|Ga0137415_10187232All Organisms → cellular organisms → Bacteria → Proteobacteria1893Open in IMG/M
3300028536|Ga0137415_11464842All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300028819|Ga0307296_10387291All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium764Open in IMG/M
3300028884|Ga0307308_10401073All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium657Open in IMG/M
3300032180|Ga0307471_102118126All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium707Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil31.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.48%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil15.53%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil9.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.83%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.94%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.97%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.97%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.97%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010126Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012380Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1007652123300002558Grasslands SoilDMLTLSRRLLEEGARHLQXFWHTPSLTPGLAHCATAADVARLYASVEEFLERLSQLTPLTFVTVSEAAAELVEAAAC*
JGI25385J37094_1011849813300002558Grasslands SoilLEQGLRHLQLSWHSPSLKPGLSPFTATAADVARLYAAVEAYLDGLSRITPLTFATVSEAAAVLG*
JGI25383J37093_1002593233300002560Grasslands SoilQGIRHLQLSWHSPSLKPGLSPFTATAADVARLYASVQAYLEGLSRMTPLTFVTVSEAGAVLAQQMLARSAGG*
JGI25384J37096_1019961513300002561Grasslands SoilELASVADMLTLSRRLLEQGLRHLQLSWHSPSLKPGLSPFTATAADVARLYAAVEAYLDGLSRITPLTFATVSEAAAVLG*
JGI25613J43889_1014816723300002907Grasslands SoilEQGVPYLQLAWHTPSLKPGLSPFAATAADVARLYAAVEAYLEGLARMTPLTFATLSEAAALLG*
JGI25382J43887_1045197623300002908Grasslands SoilRRLLEQGVRHLQVFWHSPSLTPGLSPYAATTADVTRLYAAVEAYLEGLSRMTSFTFATVSEAAAVLG*
JGI25386J43895_1016842423300002912Grasslands SoilSRRLLEQGIRHLQLSWHSPSLKPGLSPFTATAADVARLYASVQAYLEGLSRMTPLTFVTVSEAGAVLAQQMLARSAGG*
JGI25616J43925_1033025123300002917Grasslands SoilRLLEQGVPYLQLAWHTPSLKPGLSPFAATAADVARLYAAVEAYLEGLARMTPLTFATLSEAAALLG*
Ga0062590_10032226413300004157SoilLSPEFQSVEDMLTLSSRLLENGARHLHISWHTPSLKPGLSPFTATAADVERLYASIEAYFDGLVRVTSFECMTVSEAAALLLQPQLREVIGVQEHRQ*
Ga0066685_1009146413300005180SoilSVRHLQISWHSPTLKPGLSPFAATAADVARLHASIEDFLEGLSRITPFTFATVSEAAAMLGTVPRD*
Ga0066676_1029139913300005186SoilLPGIAVRTGLVRRLSLSPEFQSVAQMLTLSARLLEHGARHLHISWHTPSLKPGLSPFTRTAADVERLFATIEGYLEKLANLTPFRFVTVNEAAAVLMEAPAC*
Ga0065705_1112807413300005294Switchgrass RhizosphereRLLENGARHLHISWHTPSLKPGLSPFTATAADVERLYASIEAYFDGLVRVTSFECMTVSEAAALLLQPQLREVIGVQEHRQ*
Ga0070700_10030337323300005441Corn, Switchgrass And Miscanthus RhizosphereLLRRLSLSPEFQSVEDMLTLSSRLLENGARHLHISWHTPSLKPGLSPFTATAADVERLYASIEAYFDGLVRVTSFECMTVSEAAALLLQPQLREVIGVQEHRQ*
Ga0066689_1039356523300005447SoilGDMLTLSRRLLEQGVRHLQVFWHSPSLTPGLSPYAATTADVTRLYAAVEAYLEGLSRMTSFTFATVSEAAAVLG*
Ga0066681_1044657313300005451SoilPETASLTDMLTLSRRLLEHGVRHLQVAWHSPTHKPGLSPFAATAADVDRLYAKIEGYLEGLSRLTAFRTVTLSEAAALLG*
Ga0066681_1068413413300005451SoilMLTLSRRLLEHGVRHLQLSWHSPSLKPGLSPFAATAADVARLYARIEGYLEGLSRLTPFTCVTLSEAAAVLG*
Ga0070706_10023374423300005467Corn, Switchgrass And Miscanthus RhizosphereSVADMLTLSARLLEHGARHLHVSWHTPSLKAGLSPFTSTATDVEGLYAAIDAYLAGLARLTAFTFATVSEAAALLG*
Ga0070707_10083837823300005468Corn, Switchgrass And Miscanthus RhizosphereMLTLSRRLLEHGVRHLQLSWHSPTLKPGLSPFAASAADVARLYASIEAYLEGLSRITPFTFATVSEAAALLGEGGGQ*
Ga0070699_10175420813300005518Corn, Switchgrass And Miscanthus RhizosphereLTLSRRLLEHGVRHLQLAWHSPTHKPGLSPFAATAADVDRLYAKIEGYLEGLSRLTAFRTATLSEAAALLG*
Ga0066704_1048521023300005557SoilLCPETASVTDMLTLSRRLLEHGVRHLQVAWHSPTLKPGLSPFAATGADVDRLYAKIEGYLEGLSRLTAFRTVTLSEAAALLG*
Ga0066698_1001681753300005558SoilLSWHSPSLKPGLSPFAATAADVARLYACVEGYLNGLSRLMPLTFVTTSEAAAVLG*
Ga0066698_1002706943300005558SoilQSVAQMLTLSARLLEHGARHLHISWHTPSLKPGLSPFTRTAADVERLFATIEGYLEKLANLTPFRFVTVNEAAAVLMEAPAC*
Ga0066706_1124806223300005598SoilRHLQISWHSPTLKPGLSPFAATAADVARLHASIEDFLEGLSRITPFTFATVSEAAAMLGTVPRD*
Ga0066665_10000239193300006796SoilAAETLTLSRRLLEHGVRHLHLSWHSSSLKPDLSPFVATAADVERLYRTVEACLEGLAKLTPVTFATVSEAAAVLG*
Ga0079221_1015611413300006804Agricultural SoilRRLLEHGVPHLQVSWHSPTLKAGLSPFARSAADVARLYNSIEAYVDGLSRIAHVTFATVSEAAAAIVEPSTPAGALT*
Ga0075425_10116325113300006854Populus RhizosphereAARAGLVQRLSLCPETASLTEMLTLSRRLLEHGVRHLQLAWHSPTHTPGLSPFAATAADVDGLYAKVEGFLEGLSRMTTFQMVTFSEAAALLG*
Ga0075425_10153199213300006854Populus RhizosphereARLLDHGVRQLHMSWHTPSLTPGLSPFARTAADVDRIYASIETYLDGLAGLTSFAFATVSEAAALLV*
Ga0075434_10235838123300006871Populus RhizosphereGVRHLHVSWHTPSLKAGLSPFTSTASDVEGLYAAIDAYLAGLARLTAFTFATVSEAAALLG*
Ga0079217_1078635423300006876Agricultural SoilLASAADMFPLSRRLLERGVRHLHLSWHSPTLTPGLSPFAATPADVDRLYATVERYLDRLTGIASLSFVTVSEAAAVLEGAPAC*
Ga0075426_1082029213300006903Populus RhizosphereLSQRLLEHGVPHLQVSWHSPTLKVGLSPFARTAADVARLYSSIEGYVDGLSRIAHITFATVSEAAAAFARQAMPSGALV*
Ga0075436_10043435723300006914Populus RhizosphereMLTLSARLLDHGVRQLHMSWHTPSLTPGLSPFARTAADVDRIYASIETYLDGLAGLTSFAFATVSEAAAALLV*
Ga0066710_10008652643300009012Grasslands SoilLLEHGVRHLQLAWHSPSLKPGLSPFAPTAAEVARLYATVEAYLEGLSRITPLTFVTVSEAAALLG
Ga0066710_10411000123300009012Grasslands SoilLLEHGVRHLQLAWHSPSLKPGLSPFAPTAAEVARLYATVEAYVEGLSRITPLTFVTVSEAAALLG
Ga0099830_1028255323300009088Vadose Zone SoilSVREMLTLSQRLLEHGVPHLQVSWHSPTLQAGLSPFGRTAADVARLYSAIEGYVDGLSRMAHVTFATISEAAAALREYTAPAGARA*
Ga0066709_10331785113300009137Grasslands SoilVQRLSLCPETASVTDMLTLSRRLLEHGVRHLQVAWHSPTLKPGLSPFAATGADVDRLYAKIEGYLEGLSRLTAFRTVTLSEAAALLG*
Ga0114129_1037113123300009147Populus RhizosphereLSARLLEHGVRHLHVSWHTPSLKAGLSPFTSTASDVEGLYAAIDAYLAGLARLTAFTFATVSEAAALLG*
Ga0075423_1032562723300009162Populus RhizosphereSARLLEHGARHLHVSWHTPSLKPGLSPFTATAADVERLYATIEGFVDGLVSLTPFRFTTVTEAADLLAV*
Ga0127482_112287113300010126Grasslands SoilSRTGVVQRLALCPENTSVAGMLTLSRRLLEHGVRHLQMAWHSPSLKPGLSPFAPTAAEVARLYATIEAYLEGLSRITPLTFVTVSEAAALLG*
Ga0134088_1029538713300010304Grasslands SoilLSLNPEYESVADMLTLSARLLDHGVRQLHMSCHTPSLKPGLSPFTPTAADVERLYASIAAYVEGLARLTPFKFATVSEAAELLA*
Ga0134111_1013291213300010329Grasslands SoilARAGLVKRIVLCPELASVADMLTLSRRLLEQGVRHLQLSWHSPSLKPGLSPFTATTADVARLYAAVEAYLEGLSRITPLTFATVSEAAALLG*
Ga0134111_1037221923300010329Grasslands SoilLKRVSLSPECQGVGEMLTLARRLLEHSVRHLQISWHSPTLKPGLSPFAATAADVARLHASIEDFLEGLSRITPFTFATVSEAAAMLGTVPRD*
Ga0134121_1011136333300010401Terrestrial SoilEDMLTLSSRLLENGARHLHISWHTPSLKPGLSPFTATAADVERLYASIEAYFDGLVRVTSFECMTVSEAAALLLQPQLREVIGVQEHRQ*
Ga0137365_1065747323300012201Vadose Zone SoilCPENSSVAGMLTLSRRLLEHGVRHLQLAWHSPSLKPGLSPFAPTAAEVARLYATVEAYLEGLSRITPLTFVTVSEAAALLG*
Ga0137365_1076013023300012201Vadose Zone SoilDMLTLARRLLEEGARHLQLFWHSPSLTPGLAHCPTAADVARLYASVEEFIERLSQLTPLTFVTSSEAAAMLADSVLPEAAAC*
Ga0137363_1075506423300012202Vadose Zone SoilMLKLSARLLDHGVRQLHMSWHTPSLTPGLSPFARTAADVDRLYATIEAYLDGLAGLTSFAFATVSEAAAALPV*
Ga0137399_1106125123300012203Vadose Zone SoilMLTLSARLLDHGVRELHMSWHTPSLAPGLSPFARTAADVDRLYATIEAYLDGLAGLTSFVFATVSEAAATLLA*
Ga0137374_1016854723300012204Vadose Zone SoilMLTLSARLLEHGVRQLHMSWHTPSLTPGLSPFARTAADVDRLYATMEAYLDGLAGLTSFAFATVSETAAALLV*
Ga0137380_1002520613300012206Vadose Zone SoilRLLEHGVRHLQISWHSPTLKPGLSPFAATAADVARLHASIEDFLEGLSRITPFTFATVSEAAAMLGTVPSD*
Ga0137380_1035786423300012206Vadose Zone SoilWHSPSLKPGLSPFAATAADVARLYACVEGFLNGLSRLVPLTFVTVSEAAAVLG*
Ga0137380_1042636223300012206Vadose Zone SoilELSSVDDMLTASRRLLEHGVRHLQLSWHSPSLKPGLSPFTATAADVAGLYASVEALVEGLSRLTTLTFATISQAAALLG*
Ga0137381_1170958423300012207Vadose Zone SoilRLLEHGVRQLHVSLHSPSLTPGLTPFGATGTDVARLYASIEAYFEGLSRITRVRFATVGEAAVALGHLTPAPEDAKAC*
Ga0137376_1089831823300012208Vadose Zone SoilMLTLSRRLLEHGVRHLQLSWHSPSLKPGLSPFAATAADVARLYACIEGFLNGLSRLMPLTFVTTSEAAAVLG*
Ga0137376_1162937713300012208Vadose Zone SoilMLTLSRRLLEHGVRHLQLSWHSPSLKPGLSPFAATAADVARLYDCVEGYLNGLSRLMPLTFVTTSEAAAVLG*
Ga0137379_1020372213300012209Vadose Zone SoilRVSLCPEYQQVGDMLTLSRRLLEHGVRHLQLSWHSPSLKPGLSPFVATAADVARLYARIEGYLDGLSRLTPFRCVTLSEAAAVLG*
Ga0137377_1002930713300012211Vadose Zone SoilARLLDHGVRQLHMSCHTPSLIPGLSPFTPTAADVERLYASIEAYVEGLARLTPFKFATVSEAAELLG*
Ga0137377_1059787813300012211Vadose Zone SoilMLTLARRLLEEGARHLQLFWHSPSLTPGLAHCATAADVARLYASVEEFLARLSQLTPLRFVTSSEAAALLADSVLPEAAAC*
Ga0137386_1028606313300012351Vadose Zone SoilGVRHLQLSWHSPSLKPGLSPFTATAADVAGLYASVEALVEGLSRLTTLTFATISQAAALLG*
Ga0137367_1118020823300012353Vadose Zone SoilTLSRRLLEEGARHLQLFWHTPSLTPGLAHCATAADVARLYASVEEFLECLAQLTPLTFVRVSEAAAELAAAC*
Ga0137366_1019111913300012354Vadose Zone SoilSPSLKPGLSPFAPTAAEVARLYATIEAYLEGLSRITPLTFVTVSEAAALLG*
Ga0137384_1159123923300012357Vadose Zone SoilEMLTASRRLLEHGVRHLQLSWHSPSLKPGLSPFTATAADVAGLYASVEALVEGLSRLTTLTFATISQAAALLG*
Ga0137385_1111341023300012359Vadose Zone SoilLEQGVRHLQLFWHSPSLMPGLGHCRTAADVERLYSSVDAYLEGLTRMTSLTFVTVSEAASLLSQDMQSRPAQESAAC*
Ga0137385_1117964313300012359Vadose Zone SoilGVRHLQLSWHSPSLKPGLSPFVATAADVARLYARFEGYLDGLSRLTPFRCVTLSEAAAVLG*
Ga0134042_101966823300012373Grasslands SoilRLSLSPEFQSVADMLTLSRRLLEQEVPYLQLSWHTPSLKPGLSPFVATAADVDRLYGAVESYLEGLSRLTRFRFATVSEAAAVLG*
Ga0134042_103180913300012373Grasslands SoilLSSAADMLILSRQLLEHGVRHLQVFWHSPSHTPGLTPFVATAADAQRISDSLEAYLHGLAAMTNVKFATLSEAAAMLS*
Ga0134047_119394623300012380Grasslands SoilQMLTLSARLLEHGARHLHISWHTPSLKPGLSPFTRTTADVERLFATIEGYLEKLANLTPFRFVTVNEAAAVLMEAPAC*
Ga0134043_129546113300012392Grasslands SoilVADMLTLSARLLDHGVRQLHMSCHTPSLIPGLSPFTPTAADVERLYASIEEYVEGLARLTPFKFATVSEAAELLG*
Ga0134049_121646413300012403Grasslands SoilLLKRVSLSPEYQAVGDMLTLSRRLLEHGVRHLQLSWHSPSLKPGLSPFAATAADVARLYACIEGFLNGLSRLMPLTFVTTSEAAAVLG*
Ga0137373_1027878323300012532Vadose Zone SoilLEEGARHLQLFWHTPSLTPGLAHCATAADVARLYASVEEFLECLAQLTPLTFVTVSEAAAELAAAC*
Ga0137398_1064862923300012683Vadose Zone SoilMLTLSRRLLEQGVRHLHLTWHSPTLTPGLSPYATLAEDVDRLYAALGDYVEGLSQITSFRSVTVSEAAALLG*
Ga0137398_1091693623300012683Vadose Zone SoilETSVREMLTLSQRLLEHGVPHLQVSWHSPTLQAGLSPFGRTAADVARLYNAIEGYVDSLSRIAHVTFATISEAAAALREYTAPAGARA*
Ga0137394_1045104223300012922Vadose Zone SoilLEEGARHLQLFWHTPSLTPGLAHCATAADVARLYASVEEFLERLSQLTPLTFVTVSEAAAELVEAATC*
Ga0137419_1104124113300012925Vadose Zone SoilAEMLTLSRRLLEEGVRHLQLFWHSPSLTPGLTPFVATAADVARLYDTVERYLDGLSGMTNVTFATISEAAAMLA*
Ga0137416_1014667223300012927Vadose Zone SoilLTLSRRLLEQGVRHLQLSWHSPSLKPGLSPFAATAADVARLYAAVEAYLEGLSRITPLTFATVSEAAAVLG*
Ga0137407_1190002123300012930Vadose Zone SoilLLEHGAPHLHVSWHSPSLTPGLSPFGATATDVSRMYAAVAAYVEGLSRITKVSFATISEAAAVLGQPSPAGALAC*
Ga0137409_1161165913300015245Vadose Zone SoilASVADMLTLSRRLLEHGVRHLHMSWHSPSLTPGLSPFSATGADVARLYASVEAYLEGLSRITPVTLVTVGEAAALLGADPVAATPHR*
Ga0134089_1007076413300015358Grasslands SoilMRTLSRRLLEHGVPHLQLTLHSPSLKPGLSPFAATAADVTRLYDSVEAYLDDLSQMTPLTFATVSEAAAMLG*
Ga0132255_10205812923300015374Arabidopsis RhizosphereLLRRLSLSPEFQSVEDMLTLSSRLLENGARHLHISWHTPSLKPGLSPFTATAADVERLYASIEAYFDGLVRVTSFEFMTVSEAAALLLQPQLREVIGVQEHRQ*
Ga0184621_1005678013300018054Groundwater SedimentQLSWHSPSLKPWLSPFTATAADVAGLYAAVEAFIEGLSRITSLTFATIGQAAALLG
Ga0184618_1015864723300018071Groundwater SedimentQRLVLCPELASVADMLTLSRRLLEHGVRHLHLSWHSPSLKPGLSPFAATAADVERLYASVEAYFDGLSRITPFTFATVSEVAAALG
Ga0184609_1009994923300018076Groundwater SedimentLLQVSRRLLEYGVRHLQLSWHSPSLKPGLSPFTATAADVAGLYAAVEAFIEGLSQITPLTFATIGQAAALLG
Ga0184609_1045570023300018076Groundwater SedimentEMLTLSRRLIEKGVRHLHLSWHSPSLKPGLSPFTATTADVERLYATVEAYVERLSQITPLTFATVSEAAAVEAAAC
Ga0066655_1002506813300018431Grasslands SoilLGGLAARAGLVKRIVLCPELASVADMLTLSRRLLEQGVRHLQLSWHSPSLKPGLSPFTATTADVARLYAAVEAYLEGLSRITPLTFATVSEAAALLG
Ga0066667_1001174553300018433Grasslands SoilCPEDASVAGMLTLSRRLLEHGVRHLQLAWHSPSLKPGLSPFAPTAAEVARLYATVEAYLEGLSRITPLTFVTVSEAAALLG
Ga0193719_1000378213300021344SoilSPEFQSVAEMLTLSARLLEHGARHLHISWHTPSLTPGLSPFTRTAKDVERLYASVEKYLEKLVRLTTFRCVTVSEAAAALEEVAAC
Ga0207684_1111654313300025910Corn, Switchgrass And Miscanthus RhizosphereSVADMLTLSARLLEHGARHLHVSWHTPSLKAGLSPFTSTATDVEGLYAAIDAYLAGLARLTAFTFATVSEAAALLG
Ga0207646_1073117123300025922Corn, Switchgrass And Miscanthus RhizosphereMLTLSRRLLEHGVRHLQLSWHSPTLKPGLSPFAASAADVARLYASIEAYLEGLSRITPFTFATVSEAAALLGEGGGQ
Ga0209438_120439523300026285Grasslands SoilMLTLSARLLEHGVRHLHISWHTPSLKPGLSPFTATAADVERLYATIEAFLEGLVRLTPFQSVTVTEAAGLLAPPL
Ga0209236_121541313300026298Grasslands SoilGLVRRLSLSPEFQSVAQMLTLSARLLEHGARHLHISWHTPSLKPGLSPFTRTAADVERLFATIEGYLEKLANLTPFRFVTVNEAAAVLMEAPAC
Ga0209469_111277813300026307SoilTLSARLLDHGVRQLHMSCHTPSLIPGLSPFTPTAADVERLYASIEAYVEGLARLTPFKFATVSEAAELLG
Ga0209239_112700713300026310Grasslands SoilHGVRHLHLSWHSSSLKPDLSPFVATAADVERLYRTVEACLEGLAKLTPVTFATVSEAAAVLG
Ga0209472_127897523300026323SoilMAWHSPSLKPGLSPFAPTAAEVARLYATIEAYLEGLSRITPLTFVTVSEAAALLG
Ga0209266_106377723300026327SoilSVADMLTLSRRLLEQEVPYLQLSWHTPSLKPGLSPFVATAADVDRLYGAVESYLEGLSRLTRFRFATVSEAAAVLG
Ga0209266_111656123300026327SoilGVVQRLALCPEDASVAGMLTLSRRLLEHGVRHLQLAWHSPSLKPGLSPFAPTAAEVARLYATVEAYLEGLSRITPLTFVTVSEAAALLG
Ga0209802_129019313300026328SoilLLEQGIRHLQLSWHSPSLKPGLSPFTATAADVARLYASVQAYLEGLSRMTPLTFVTVSEAGAALAQQMLARSAGG
Ga0209377_113183523300026334SoilLQLSWHSPSLKPGLSPFTGTAADVARLYASVEAYLEGLSRMTPLTFVTVSEAGAVLAQQMLARSAGG
Ga0209807_108520923300026530SoilMLTLSARLLEHGARHLHISWHTPSLKPGLSPFSATAADVERLYATIEGFFDGLASLTPFRFMTVTEAAGLFAV
Ga0209058_106775113300026536SoilQSVAQMLTLSARLLEHGARHLHISWHTPSLKPGLSPFTRTAADVERLFATIEGYLEKLANLTPFRFVTVNEAAAVLMEAPAC
Ga0209590_1098219413300027882Vadose Zone SoilQLSWHSPSLKPGLSPFAPTAAEVARLYATVEAYLEGLSRITPLAFVTVSEAAALLG
Ga0137415_1018723213300028536Vadose Zone SoilLTLSRRLLEQGVRHLQLSWHSPSLKPGLSPFAATAADVARLYAAVEAYLEGLSRITPLTFATVSEAAAVLG
Ga0137415_1146484213300028536Vadose Zone SoilLEQGMRHLQLCWHSPSLKPGLSPFTATAADVARLYASVQAYLESLSRITPLTFVTVSEAGTLLAQQMRSGSAGG
Ga0307296_1038729113300028819SoilLLEHGVRHLQLSWHSPSLKPGLSPFTATAADVAGLYASVEAFVEGLSQMTTLTFATISQAAALLG
Ga0307308_1040107313300028884SoilQGVRHLQLFWHSPSLTPGLSPYAATAADVTRLYASVEAYLEGLSRITPFTFATVSEAAAVLKPAICV
Ga0307471_10211812613300032180Hardwood Forest SoilLTLSRRLLEQGVRHLHLFWHSPTLMPGLGHSATAADVDRLYASVEAYLEGLARMTALKFVTVSEAAALLARDVQPQAAESAAC

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.