Metagenome Family F098982

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098982
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	76 residues
Representative Sequence	NLRPKAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPG
Number of Associated Samples	75
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.98 %
% of genes near scaffold ends (potentially truncated)	85.44 %
% of genes from short scaffolds (< 2000 bps)	92.23 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.728 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.864 % of family members)
Environment Ontology (ENVO)	Unclassified (58.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.456 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.52% β-sheet: 0.00% Coil/Unstructured: 48.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF06283	ThuA	34.95
PF10282	Lactonase	6.80
PF04392	ABC_sub_bind	4.85
PF13458	Peripla_BP_6	3.88
PF01370	Epimerase	3.88
PF05050	Methyltransf_21	1.94
PF08042	PqqA	1.94
PF04317	DUF463	1.94
PF13751	DDE_Tnp_1_6	0.97
PF01471	PG_binding_1	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	34.95
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.85
COG3106	Ras-like GTP-binding stress-induced protein YcjX, DUF463 family	Signal transduction mechanisms [T]	1.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.73 %
Unclassified	root	N/A	24.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.73 %
Unclassified	root	N/A	24.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.73 %
Unclassified	root	N/A	24.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.98 %
Unclassified	root	N/A	24.27 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.36 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.24 %
Unclassified	root	N/A	24.27 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15.53 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.97 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.56 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.91 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.97 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.97 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.56 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	11.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.94 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.97 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.97 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.97 %
Herpetosiphonales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.56 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	11.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.94 %
Euzebyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae	0.97 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.97 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.97 %
Herpetosiphonaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.71 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	7.77 %
Euzebya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → Euzebya	0.97 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.97 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.97 %
unclassified Herpetosiphonaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae	0.97 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	9.71 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	7.77 %
Euzebya tangerina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → Euzebya → Euzebya tangerina	0.97 %
Herpetosiphonaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	0.97 %
Bradyrhizobium guangxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	0.97 %
Beijerinckiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	0.97 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004082\|Ga0062384_101008159	Not Available	596	Open in IMG/M
3300005174\|Ga0066680_10119648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1628	Open in IMG/M
3300005184\|Ga0066671_10375945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	906	Open in IMG/M
3300005332\|Ga0066388_106224149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300005332\|Ga0066388_108072606	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300005555\|Ga0066692_10808615	Not Available	576	Open in IMG/M
3300005764\|Ga0066903_102394704	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300005764\|Ga0066903_104767907	Not Available	721	Open in IMG/M
3300006797\|Ga0066659_10566129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	919	Open in IMG/M
3300009137\|Ga0066709_100323568	All Organisms → cellular organisms → Bacteria → Proteobacteria	2106	Open in IMG/M
3300010048\|Ga0126373_12234081	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300010048\|Ga0126373_13160905	Not Available	513	Open in IMG/M
3300010048\|Ga0126373_13240125	Not Available	507	Open in IMG/M
3300010359\|Ga0126376_12806568	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300010360\|Ga0126372_11801363	Not Available	655	Open in IMG/M
3300010361\|Ga0126378_11540652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300011120\|Ga0150983_12305208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium	560	Open in IMG/M
3300011120\|Ga0150983_15376769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	636	Open in IMG/M
3300012203\|Ga0137399_10238988	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300012205\|Ga0137362_10288395	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300012205\|Ga0137362_11418578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300012357\|Ga0137384_11563892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium guangxiense	509	Open in IMG/M
3300012362\|Ga0137361_10369729	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012923\|Ga0137359_10282766	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300012923\|Ga0137359_10676324	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300012925\|Ga0137419_11288801	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012930\|Ga0137407_11586298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	623	Open in IMG/M
3300012960\|Ga0164301_11689268	Not Available	528	Open in IMG/M
3300015264\|Ga0137403_10971993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300016270\|Ga0182036_10079892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2162	Open in IMG/M
3300016319\|Ga0182033_10342089	Not Available	1248	Open in IMG/M
3300016319\|Ga0182033_11156622	All Organisms → cellular organisms → Bacteria → Terrabacteria group	692	Open in IMG/M
3300016341\|Ga0182035_10085305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2267	Open in IMG/M
3300016341\|Ga0182035_10231813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1480	Open in IMG/M
3300016341\|Ga0182035_12052250	Not Available	520	Open in IMG/M
3300016357\|Ga0182032_11204080	Not Available	652	Open in IMG/M
3300016371\|Ga0182034_10209755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1512	Open in IMG/M
3300016387\|Ga0182040_11210865	All Organisms → cellular organisms → Bacteria → Terrabacteria group	635	Open in IMG/M
3300016404\|Ga0182037_11013484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300016404\|Ga0182037_11048498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300016404\|Ga0182037_11788268	Not Available	549	Open in IMG/M
3300016422\|Ga0182039_10773430	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300016422\|Ga0182039_11843887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300017970\|Ga0187783_10610465	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300017970\|Ga0187783_10954172	Not Available	618	Open in IMG/M
3300018062\|Ga0187784_11255315	Not Available	587	Open in IMG/M
3300020580\|Ga0210403_10354332	All Organisms → cellular organisms → Bacteria → Proteobacteria	1201	Open in IMG/M
3300020581\|Ga0210399_10733933	Not Available	810	Open in IMG/M
3300020583\|Ga0210401_11081329	Not Available	661	Open in IMG/M
3300021404\|Ga0210389_11096033	Not Available	615	Open in IMG/M
3300021560\|Ga0126371_11262806	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300021560\|Ga0126371_13056601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Herpetosiphonales → Herpetosiphonaceae → unclassified Herpetosiphonaceae → Herpetosiphonaceae bacterium	566	Open in IMG/M
3300031543\|Ga0318516_10442974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300031545\|Ga0318541_10132068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1362	Open in IMG/M
3300031561\|Ga0318528_10423454	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300031561\|Ga0318528_10431714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	707	Open in IMG/M
3300031573\|Ga0310915_10575234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300031573\|Ga0310915_10763965	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300031573\|Ga0310915_11173000	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031681\|Ga0318572_10128078	All Organisms → cellular organisms → Bacteria → Proteobacteria	1454	Open in IMG/M
3300031719\|Ga0306917_11351051	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031724\|Ga0318500_10700815	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300031744\|Ga0306918_11246601	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300031753\|Ga0307477_10798942	Not Available	627	Open in IMG/M
3300031763\|Ga0318537_10093298	Not Available	1113	Open in IMG/M
3300031763\|Ga0318537_10320006	Not Available	574	Open in IMG/M
3300031769\|Ga0318526_10120077	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300031770\|Ga0318521_10772870	Not Available	585	Open in IMG/M
3300031771\|Ga0318546_10921395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300031778\|Ga0318498_10513666	Not Available	527	Open in IMG/M
3300031792\|Ga0318529_10255562	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300031793\|Ga0318548_10434397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300031797\|Ga0318550_10655352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	503	Open in IMG/M
3300031821\|Ga0318567_10525935	All Organisms → cellular organisms → Bacteria → Terrabacteria group	672	Open in IMG/M
3300031833\|Ga0310917_10093198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	1927	Open in IMG/M
3300031833\|Ga0310917_10495846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	831	Open in IMG/M
3300031879\|Ga0306919_10659125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → Euzebyaceae → Euzebya → Euzebya tangerina	807	Open in IMG/M
3300031879\|Ga0306919_10779903	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031893\|Ga0318536_10542010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	583	Open in IMG/M
3300031910\|Ga0306923_10205648	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300031910\|Ga0306923_11281785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	778	Open in IMG/M
3300031912\|Ga0306921_10858493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300031941\|Ga0310912_10154641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1732	Open in IMG/M
3300031942\|Ga0310916_11460822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	558	Open in IMG/M
3300031945\|Ga0310913_10048433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2765	Open in IMG/M
3300031954\|Ga0306926_11491821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300032001\|Ga0306922_10817664	Not Available	973	Open in IMG/M
3300032001\|Ga0306922_12194787	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300032043\|Ga0318556_10279571	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300032043\|Ga0318556_10313557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	820	Open in IMG/M
3300032051\|Ga0318532_10238811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300032065\|Ga0318513_10502175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	593	Open in IMG/M
3300032068\|Ga0318553_10044669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	2168	Open in IMG/M
3300032068\|Ga0318553_10527979	Not Available	618	Open in IMG/M
3300032090\|Ga0318518_10242282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	925	Open in IMG/M
3300032091\|Ga0318577_10331335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	728	Open in IMG/M
3300032091\|Ga0318577_10386212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300032094\|Ga0318540_10349537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300032205\|Ga0307472_100522747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1029	Open in IMG/M
3300032205\|Ga0307472_101649720	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032261\|Ga0306920_103347948	All Organisms → cellular organisms → Bacteria → Terrabacteria group	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.03%
Aquatic	Environmental → Aquatic	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.03%
Freshwater	Environmental → Aquatic → Freshwater	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.29%
Loam	Environmental → Terrestrial → Soil → Loam	5.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.97%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062384_1010081591	3300004082	Bog Forest Soil	ADTRIMCRNMRPKSAGYWGMEADFVSFLARNRCKPPVTQSQFHAWVRLLGLPIAAYNNRIWLEHIPDVATQLIFGGSPGLRTGADD*
Ga0066680_101196482	3300005174	Soil	MCRNLQPKSAGYWGMEADFVSFLARNRCKPPVTRAQFQAWARALGVPIAAYNNRVWLTRIPDVATQLIFGGSPGPQAEVIG*
Ga0066671_103759453	3300005184	Soil	LARNRCTPPVTQAQFRAWARALGLPIAAYNNRAWLRCIPDVATQLIFGGSPGPTWEVIE*
Ga0066388_1062241491	3300005332	Tropical Forest Soil	DIWDKVGAPEAAGDTRMMCRNLRPKSAGYWGMEADFVSFLARNRCRPPVTQAQFRTWSRALAIPVAAYNNRAWLTRIPDVATQLIFGGSPAPSGG*
Ga0066388_1080726062	3300005332	Tropical Forest Soil	VAQRAGMSSAQITRLQFRAWARRLGIPVAAYDDRAWLSRIPDVATQLIFGGSPSVDAGRS
Ga0066692_108086151	3300005555	Soil	LVTLPSSSPDPVPVIWDKIGAPDAAADTLAMCRNLRPKSAGYWEMEADFVSFPAPNRCTLPVTRSQFQGWSRSLGLPIAAYDDRAWLARVPHVATELIFGGS
Ga0066903_1023947042	3300005764	Tropical Forest Soil	MEANFVSFWLATGKPPVTRPQFRVASTLGVPIGAYANRAWLSRIPDVATQMIFGGSPGLNVSASG*
Ga0066903_1047679071	3300005764	Tropical Forest Soil	KIGASEAAGDTRIMCRNLRPKSAGYLGMEADAVSFLARNRCRPPVTKSQFHTSARGLGLPIAAYNNHKWLQRIPAVATQLIFGGWPGLRARVDD*
Ga0066659_105661291	3300006797	Soil	IMCRNLQPKSAGYWGMEADFVSFLARNRCKPPVTRAQFQAWARALGVPIAAYNNRVWLTRIPDVATQLIFGGSPGPQAEVIG*
Ga0066709_1003235681	3300009137	Grasslands Soil	WGMEADFVSFLVRNRCKPPVTQAQFRSWARTLGVPIAAYNNRAWLTRIPDVATQMIFGGSPGSQAP*
Ga0126373_122340812	3300010048	Tropical Forest Soil	FWGMEANFVSFLARNQCKPPVTRFQFRAWARQLEVPISVYGHHAWLSRIPDVATQLMILLP*
Ga0126373_131609051	3300010048	Tropical Forest Soil	EIWDKIGASEAAGDTRIMCRNLRPKSAGYLGMEADSVSFLARNRCRPPVTKSQFHTWARGLGLPIAAYNNHKWLQRIPAVATQLIFGGWPGLRARVDD*
Ga0126373_132401252	3300010048	Tropical Forest Soil	MEANCVSFFARNPCKPLVTRSQFRAGAHALGLPIAAYDNRAWRERIPDVATQLIFGGSPGPSER*
Ga0126376_128065682	3300010359	Tropical Forest Soil	EAATDTRAMCRNLKPKAAGYWGMETDFVSFLARCRCKPPVSHRQFRAWARTLGMPILAYADRAWLSRIPDVATQLIFGGSPGLKA*
Ga0126372_118013631	3300010360	Tropical Forest Soil	YTEIWDKIGASEAAGDTRIMCRNLRPKSAGYLGMEADAVSFLARNRCRPPVTKSQFHTSARGLGLPIAAYNNHKWLQRIPAVATQLIFGGWPGLRARVDD*
Ga0126378_115406522	3300010361	Tropical Forest Soil	DTRIMCRNLRPKSVGYWGMEADFVSFLARNRCRPPVTQAQFRNWARELRLPVAAYNNGAWLTCIPDVATQLIFGGSPGLSGG*
Ga0150983_123052081	3300011120	Forest Soil	ADIWDKIGALEAAANTRIMCRNMRPKSAGYWGMEADFVSFLARNRCKPPVTQSQFRTWARALGVPIAAYNNRAWLTRIPDVATQLIFGGSPGPSTGSGR*
Ga0150983_153767691	3300011120	Forest Soil	MCRNLRPKAAGYWGMEANFVSFLARTRAKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER*
Ga0137399_102389881	3300012203	Vadose Zone Soil	PKSAGYWGMEANFVSFLAHNRCRPPVTRSQFQAWARTLGVPIAAYDNRSWRERIPDVATQLIFGGSPGLRAR*
Ga0137362_102883952	3300012205	Vadose Zone Soil	MCRNLRPKSAGYWGMEANFVSFLAHNRCRPPVTRSQFQAWARTLRVPIAGYDNRAWRERIPDVATQLIFGGSPG*
Ga0137362_114185782	3300012205	Vadose Zone Soil	MCRNLRPKSAGYWGMEANFVSFLAHNRCRPPVTRSQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSP
Ga0137384_115638922	3300012357	Vadose Zone Soil	MCRNLRPKSAGYWGMEANFVSFLAHRRCKPPVTQAQFRAWAHRLGLPIAAYANSAWLSRIPDVATQLIFGGSPGLREE*
Ga0137361_103697292	3300012362	Vadose Zone Soil	LDPAADTRAMCRNLRPKSAGYWGMEANFVSFLAHNRCRPPVTRSQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPAVSGR*
Ga0137361_104189452	3300012362	Vadose Zone Soil	RDVPQPAAEIGRLLGDGSQFLSFLAHNRCRPPVTRSQFQAWARRLGVPIAAYDNRAWRERIPDVATQLIFGGSPGRSER*
Ga0137359_102827662	3300012923	Vadose Zone Soil	MCRDLRPKSTGYWGMEANFVSFLAHNRCRPPVTRSQFQAWARTLRVPIAGYDNRAWRERIPDVATQLIFGGSPG*
Ga0137359_106763242	3300012923	Vadose Zone Soil	MCRNLRPKSAGYWGMEANFVSFLAHNRCRPPVTRSQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPAVSGR*
Ga0137419_112888011	3300012925	Vadose Zone Soil	MEANFVSFLAHNRCRPPVTRSQFQAWARTLGVPIAAYDNCAWLGRIPDVATQLIFGGSPG
Ga0137407_115862982	3300012930	Vadose Zone Soil	MCRNLRPKSAGYWGMEANFVSFLAHNGCKPPVTRPQFRAWARALCLPIAAYDNHAWLSRIPDVATQLIFGGSPGP
Ga0164301_116892681	3300012960	Soil	ADTRIMCRNMRPKSAGYWGMEADFVSFLARNRCKPPVTQSQFQTWARALGVPIAAYNNRAWLTRSPDVATQLIFGGSPGPSTGMGR*
Ga0137403_109719931	3300015264	Vadose Zone Soil	MCRNLRPKSAGYWGMEANFVSFLAHNRCRPPVTRSQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPAVSG
Ga0182036_100798923	3300016270	Soil	ADIWDKIGAPEAAADTRTMCHNLRPKAAGYWGMEANFVSFLARTRGKPPVTRPQFQAWARTVGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0182033_103420892	3300016319	Soil	MMYRNLRPKSAGYWGMEADFVSFLARNRCRPPVTQAQFRNWARELRLPVAAYNNRAWLTCIPDVATQLIFGGSPGLSVG
Ga0182033_111566222	3300016319	Soil	SFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPGVYGGS
Ga0182035_100853053	3300016341	Soil	YWGMEANFVSFLARTRGKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0182035_102318131	3300016341	Soil	AAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPRLNARASG
Ga0182035_120522501	3300016341	Soil	WDKIGAPEAAADTRAMCRNLRPKAAGYWGMEANFGSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPRLNARASG
Ga0182032_112040801	3300016357	Soil	GSPEAAADTRTMCRNLRPKAAGFWGMEANFVSFLARNQCKPPVTRSQFRAWVRQLEAPVAVYEHHAWLSWIPDVATQLIFGGSPGPRAG
Ga0182034_102097551	3300016371	Soil	EAAADTRAMCRNLRPKAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPRLNARASG
Ga0182040_112108651	3300016387	Soil	ADTRAMCRNLRPKAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPSAAYDNRAWRERIPDVATQLIFGGSPGVYGGS
Ga0182037_110134841	3300016404	Soil	IWDKVGAPEAAGDTRMMCRNLRPKSAGYWGMEADFVSFLARNRCRPPVTQAQFRNWARELRLPVAAYNNRAWLTCIPDVATQLIFGGSPGLSVG
Ga0182037_110484981	3300016404	Soil	KAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPG
Ga0182037_117882681	3300016404	Soil	KAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATHLIFGGSPRLNARASG
Ga0182039_107734302	3300016422	Soil	FGSFLARNRCKPQVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPRLNARASG
Ga0182039_118438872	3300016422	Soil	PKAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPGVDGGS
Ga0187783_106104651	3300017970	Tropical Peatland	PKAAGFWGMEANFVSFLARNRCSPPVTRRQFRAWARSLGMPVASYGHHSWLARIPDVATQLVFGGSPGPRAG
Ga0187783_109541721	3300017970	Tropical Peatland	TMCRNLCPKAAGFWGMEANFVSFLARNQCKPPVTRLQFRAWARQLEVPVAAYGHHAWLSRIPDVATQLIFGGSLGSSSG
Ga0187784_112553151	3300018062	Tropical Peatland	ISFLARNRCNPPVTRRQFQAWARSLGMPVAAYGHHSWLARIPDVATQLIFGGSPGLSAD
Ga0210403_103543322	3300020580	Soil	ANFVSFLARTRAKPPVTRPQFQAWARTLGVPIAAYDNRAWRARIPDVATQLIFGGSPSPSER
Ga0210399_107339332	3300020581	Soil	DIWDEVGAPEAAADTRIMCRNLRPKSAGYWGMEADFVSFLARNRCRPPVTQSQFRLWARALGLPIAAYNNRAWLTRIPDVATQLIFGGSPGSNLRG
Ga0210401_110813292	3300020583	Soil	IMCRNMRPKSAGYWGMEADFVSFLARNRCKPPVTQSQFRTWARALGVPIAAYNNRAWLTRIPDVATQLIFGGSPGPSTGTGR
Ga0210389_110960331	3300021404	Soil	MCRNMRPKSAGYWGMEADFVSFLARNRCKPPVTQSQFQTWARALRVPIAAYNNRAWLTRIPDVATQLIFGGSPGPSTGTGR
Ga0126371_112628062	3300021560	Tropical Forest Soil	LEANFVSFLARNQCKPPVTRFQFRAWARQLEVPVAAYGRHAWLSCIPDVATQLMILLP
Ga0126371_130566012	3300021560	Tropical Forest Soil	YWGMEADFVSFLARNHCKPPVTQAQFHAWARALGVPVAAYNNRVWLQRIPDVATQLMFVGSPGVGRSR
Ga0318516_104429741	3300031543	Soil	YWGMEADFVSFLARNRCRPPATQAQFRNWARELRLPVAAYNNRAWLTCIPDVATQLIFGGSPGLSVG
Ga0318541_101320681	3300031545	Soil	STPISGTSSAPPKAAADTRAMCRNLRPKSAGYWGMEANFVSFLARNRCKPPVTRPQFRAWASILGVPIAAYANRAWLSRIPDIATQMVFGCSPGLNVSASG
Ga0318528_104234543	3300031561	Soil	KSAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGLPIAAYDNRTWRERIPDVATQLIFGGSPGVGRSR
Ga0318528_104317141	3300031561	Soil	VSFLARNRCKPSVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPG
Ga0310915_105752342	3300031573	Soil	DTRAMCRNLRPKSAGYWGMEANFVSFLARNRCKPPVTRPQFRAWASILGVPIAAYANRAWLSRIPDIATQMVFGCSPGLNVSASG
Ga0310915_107639651	3300031573	Soil	MEANFVSFLARNRCKPPVTRPQFRAWARALGLPIAAYDNRTWRERIPDVATQLIFGGSPGVGRSR
Ga0310915_111730002	3300031573	Soil	EAAGDTRAMCRNLRPKAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPGVYGGS
Ga0318572_101280783	3300031681	Soil	MCHNLRPKAAGYWGMEANFVSFLARTRGKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0306917_113510512	3300031719	Soil	AGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGLPIAAYDNRTWRERIPDVATQLIFGGSPGVGRSR
Ga0318500_107008151	3300031724	Soil	CHNLRPKAAGYWGMEANFVSFLARTRGKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0306918_112466011	3300031744	Soil	SAGYWGMEADFVSFLARTHCKPPVTQAQFYAWARTLGMPVAAYNNRAWLQRIPDVATQLIFGGSPGLSAAPPT
Ga0307477_107989421	3300031753	Hardwood Forest Soil	ETRIICRNLRPKSAGYWGMEADFVSFLARNRCRPPVTRPQFQAWARALGLPIAAYNNRAWLTRIPDVATQLIFGGSPGPR
Ga0318537_100932982	3300031763	Soil	SFLARNRCRPPVTQAQFRNWARELRLPVAAYNNRAWLTCIPDVATQLIFGGSPGLSGG
Ga0318537_103200061	3300031763	Soil	PKAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPRLNARASG
Ga0318526_101200771	3300031769	Soil	IWDKIGAPEAAADTRAMCRNLRPKAAGYWGMEANFVSFLARTRGKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPGPSER
Ga0318521_107728701	3300031770	Soil	FWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATHLIFGGSHA
Ga0318546_109213951	3300031771	Soil	RNLRPKAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPGVYGGS
Ga0318498_105136661	3300031778	Soil	DIWDKIGAPEAAADTRIMCRNLRPKSAGYWGMEADFVSFLARTHCKPPVTQAQFYAWARTLGMPVAAYNNRAWLQRIPDVATQLIFGGSPGLSAAPPT
Ga0318529_102555621	3300031792	Soil	GYWGMEANFVSFLARNRFKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPGPSER
Ga0318548_104343971	3300031793	Soil	SAPQIGRLLGMEADFVSFLARNRCRPPATQAQFRNWARELRLPVAAYNNRAWLTCIPDVATQLIFGGSPGLSVG
Ga0318550_106553521	3300031797	Soil	DKIGAPEAAGDTRAMCRNLRPKAAGYWGMEANFVSFLARNRFKPPVTRLQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPGPSER
Ga0318567_105259352	3300031821	Soil	NLRPKAAGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPG
Ga0310917_100931981	3300031833	Soil	RPKAAGYWGMEANFVSFLARTRGKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0310917_104958462	3300031833	Soil	ICRNLRPKSAGYWGMEANFVSFLARNRCKPPVTRPQFRAWASILGVPIAAYANWAWLSRIPDIATQMVFGCSPGLNVSASG
Ga0306919_106591252	3300031879	Soil	FLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATHLIFGGSHA
Ga0306919_107799033	3300031879	Soil	FVSFLARNRCKPPVTRPQFRAWARALGLPIAAYDNRTWRERIPDVATQLIFGGSPGVGRS
Ga0318536_105420102	3300031893	Soil	AGYWGMEANFVSFLARTRGKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0306923_102056482	3300031910	Soil	MEADFVSFLARNRCKPPVTRPQFRAWARATGVPIAAYDNRAWLSRLPDVATQLIFGGSPGVSTSN
Ga0306923_112817851	3300031910	Soil	DDTRAMCRNLRPKTAGYWGMEANFVSFLARSRCEPPVTRPQFRAWARVLGVPIAAYDNRAWRERIPDVATQLIFGGSPGPSER
Ga0306921_108584932	3300031912	Soil	CHNLRPKAAGYWGMEANFVSFLARTRGKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPGPSESNR
Ga0310912_101546412	3300031941	Soil	MEANFVSFLARNRCKPPVTRPQFRAWASILGVPIAAYANRAWLSRIPDIATQMVFGCSPGLNVSASG
Ga0310916_114608222	3300031942	Soil	TAGYWGMEANFVSFLARSRCKPPVTRPQFRAWARALGVPIAAYDNRGWRERIPDVATQLIFGGSPGPSER
Ga0310913_100484331	3300031945	Soil	RNLRPKTAGYWGMEANFVSFLARSRCKPPVTRPQFRAWARALGVPIAAYDNRGWRERIPDVATQLIFGGSPGPSER
Ga0306926_114918211	3300031954	Soil	LARNRCKPPVTRPQFRAWARALGLPIAAYDNRTWRERIPDVATQLIFGGSPGVGPSR
Ga0307479_103598993	3300031962	Hardwood Forest Soil	ARDVPKPAAEIGRLLGMEANFVSFLAHNRCRPPVTRSQFQARARTLGVPIATYDNRAWRERIPDVATQLIFGGSPG
Ga0306922_108176641	3300032001	Soil	PKAAGFWGMEANFVSFLARNQCKPPVTRSQFRAWVRQLEAPVAVYEHHAWLSWIPDVATQLIFGGSPGPRAG
Ga0306922_121947871	3300032001	Soil	GAPEAAADTRGMCRNLRPKAAGYWGMEANFVSFLARNRCKPSVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPG
Ga0318556_102795712	3300032043	Soil	RNLRPKAAGFWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0318556_103135572	3300032043	Soil	LYADIWDKIGAPEAADDTRAMCRNLRPKTAGYWGMEANFVSFLARSRCKPPVTRPQFRAWARALGVPIAAYDNRGWRERIPDVATQLIFGGSPGPSER
Ga0318532_102388112	3300032051	Soil	PEAAGDTRMMCRNLRPKSAGYWGMEADFVSFLARNRCRPPATQAQFRNWARELRLPVAAYNNRAWLTCIPDVATQLIFGGSPGLSVG
Ga0318513_105021752	3300032065	Soil	AADTRTMCHNLRPKAAGYWGMEANFVSFLARTRGKPPVTRPQFQAWARTVGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0318553_100446691	3300032068	Soil	YWGMEANFVSFLARNRFKPPVTRLQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPGPSER
Ga0318553_105279792	3300032068	Soil	PKAAVETCAMCRNLRPKSAGYWGMEADFVSFLARNRCKPPVTRPQFRAWARATGVPIAAYDNRAWLSRLPDVATQLIFGGSPGVSTSN
Ga0318518_102422822	3300032090	Soil	RNLRPKSAGYWGMEANFVSLLARNRCKPPVTRPQFRAWASILGVPIAAYANRAWLSRIPDIATQMVFGCSPGLNVSASG
Ga0318577_103313351	3300032091	Soil	GYWGMEANFVSFLARTRGKPPVTRPQFQAWARTLGVPIAAYDNRAWRERIPDVATQLIFGGSPSPSER
Ga0318577_103862121	3300032091	Soil	MCRNLRPKSAGFWGMEANFVSFLAAHRYRPLVTRVQFRTWARDLGLPIAAYDNSAWRARIPDVATQLIFGGSPGLRVTADD
Ga0318540_103495371	3300032094	Soil	GMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSP
Ga0307472_1005227472	3300032205	Hardwood Forest Soil	ADTRAMCRNLRPKSAGYWGMEANFVSFLADNRCRPPVTRSLFQAWARTLSVPIAAYDNRAWRERIPDVATQLIFGGSPG
Ga0307472_1016497202	3300032205	Hardwood Forest Soil	SAGYWGMEANFVSFLAHNRCKPPVTRSQFQAWARSLGYDNHTWRERIPDVATQLIFGGSPGLSTR
Ga0306920_1033479482	3300032261	Soil	AGYWGMEANFVSFLARNRCKPPVTRPQFRAWARALGVPIAAYDNRAWRERIPDVATQLIFGGSPGVYGGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098982

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences